/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000051.0.fna -queryname NZ_AEXO010000051.0
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000051.0.fna -queryname NZ_AEXO010000051.0
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000051.0.fna -queryname NZ_AEXO010000051.0
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000501.9.fna -queryname NZ_AEXO010000501.9
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000501.9.fna -queryname NZ_AEXO010000501.9
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000501.9.fna -queryname NZ_AEXO010000501.9
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000311.99.fna -queryname NZ_ATWK010000311.99
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000311.99.fna -queryname NZ_ATWK010000311.99
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000311.99.fna -queryname NZ_ATWK010000311.99
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000091.100.fna -queryname NZ_ATWK010000091.100
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000091.100.fna -queryname NZ_ATWK010000091.100
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000091.100.fna -queryname NZ_ATWK010000091.100
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000171.101.fna -queryname NZ_ATWK010000171.101
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000171.101.fna -queryname NZ_ATWK010000171.101
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000171.101.fna -queryname NZ_ATWK010000171.101
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000191.102.fna -queryname NZ_ATWK010000191.102
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000191.102.fna -queryname NZ_ATWK010000191.102
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000191.102.fna -queryname NZ_ATWK010000191.102
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000261.103.fna -queryname NZ_ATWK010000261.103
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000261.103.fna -queryname NZ_ATWK010000261.103
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000261.103.fna -queryname NZ_ATWK010000261.103
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000431.104.fna -queryname NZ_ATWK010000431.104
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000431.104.fna -queryname NZ_ATWK010000431.104
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000431.104.fna -queryname NZ_ATWK010000431.104
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000121.105.fna -queryname NZ_ATWK010000121.105
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000121.105.fna -queryname NZ_ATWK010000121.105
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000121.105.fna -queryname NZ_ATWK010000121.105
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000371.106.fna -queryname NZ_ATWK010000371.106
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000371.106.fna -queryname NZ_ATWK010000371.106
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000371.106.fna -queryname NZ_ATWK010000371.106
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000111.107.fna -queryname NZ_ATWK010000111.107
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000111.107.fna -queryname NZ_ATWK010000111.107
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000111.107.fna -queryname NZ_ATWK010000111.107
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000381.108.fna -queryname NZ_ATWK010000381.108
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000381.108.fna -queryname NZ_ATWK010000381.108
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000381.108.fna -queryname NZ_ATWK010000381.108
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000181.10.fna -queryname NZ_AEXO010000181.10
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000181.10.fna -queryname NZ_AEXO010000181.10
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000181.10.fna -queryname NZ_AEXO010000181.10
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000301.109.fna -queryname NZ_ATWK010000301.109
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000301.109.fna -queryname NZ_ATWK010000301.109
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000301.109.fna -queryname NZ_ATWK010000301.109
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000181.110.fna -queryname NZ_ATWK010000181.110
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000181.110.fna -queryname NZ_ATWK010000181.110
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000181.110.fna -queryname NZ_ATWK010000181.110
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000321.111.fna -queryname NZ_ATWK010000321.111
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000321.111.fna -queryname NZ_ATWK010000321.111
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000321.111.fna -queryname NZ_ATWK010000321.111
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000441.112.fna -queryname NZ_ATWK010000441.112
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000441.112.fna -queryname NZ_ATWK010000441.112
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000441.112.fna -queryname NZ_ATWK010000441.112
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000211.113.fna -queryname NZ_ATWK010000211.113
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000211.113.fna -queryname NZ_ATWK010000211.113
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000211.113.fna -queryname NZ_ATWK010000211.113
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000361.114.fna -queryname NZ_ATWK010000361.114
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000361.114.fna -queryname NZ_ATWK010000361.114
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000361.114.fna -queryname NZ_ATWK010000361.114
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000021.115.fna -queryname NZ_ATWK010000021.115
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000021.115.fna -queryname NZ_ATWK010000021.115
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000021.115.fna -queryname NZ_ATWK010000021.115
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000271.116.fna -queryname NZ_ATWK010000271.116
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000271.116.fna -queryname NZ_ATWK010000271.116
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000271.116.fna -queryname NZ_ATWK010000271.116
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000421.117.fna -queryname NZ_ATWK010000421.117
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000421.117.fna -queryname NZ_ATWK010000421.117
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000421.117.fna -queryname NZ_ATWK010000421.117
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000401.118.fna -queryname NZ_ATWK010000401.118
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000401.118.fna -queryname NZ_ATWK010000401.118
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000401.118.fna -queryname NZ_ATWK010000401.118
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000701.11.fna -queryname NZ_AEXO010000701.11
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000701.11.fna -queryname NZ_AEXO010000701.11
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000701.11.fna -queryname NZ_AEXO010000701.11
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000651.119.fna -queryname NZ_JRNO010000651.119
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000651.119.fna -queryname NZ_JRNO010000651.119
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000651.119.fna -queryname NZ_JRNO010000651.119
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000081.120.fna -queryname NZ_JRNO010000081.120
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000081.120.fna -queryname NZ_JRNO010000081.120
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000081.120.fna -queryname NZ_JRNO010000081.120
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000801.121.fna -queryname NZ_JRNO010000801.121
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000801.121.fna -queryname NZ_JRNO010000801.121
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000801.121.fna -queryname NZ_JRNO010000801.121
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000991.122.fna -queryname NZ_JRNO010000991.122
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000991.122.fna -queryname NZ_JRNO010000991.122
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000991.122.fna -queryname NZ_JRNO010000991.122
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000491.123.fna -queryname NZ_JRNO010000491.123
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000491.123.fna -queryname NZ_JRNO010000491.123
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000491.123.fna -queryname NZ_JRNO010000491.123
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000231.124.fna -queryname NZ_JRNO010000231.124
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000231.124.fna -queryname NZ_JRNO010000231.124
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000231.124.fna -queryname NZ_JRNO010000231.124
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000091.125.fna -queryname NZ_JRNO010000091.125
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000091.125.fna -queryname NZ_JRNO010000091.125
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000091.125.fna -queryname NZ_JRNO010000091.125
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000031.126.fna -queryname NZ_JRNO010000031.126
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000031.126.fna -queryname NZ_JRNO010000031.126
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000031.126.fna -queryname NZ_JRNO010000031.126
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000031.126.AOI.fna -queryname NZ_JRNO010000031.126
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000031.126.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000031.126.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -queryname NZ_JRNO010000031.126
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -table NZ_JRNO010000031.126.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000051.127.fna -queryname NZ_JRNO010000051.127
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000051.127.fna -queryname NZ_JRNO010000051.127
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000051.127.fna -queryname NZ_JRNO010000051.127
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000921.128.fna -queryname NZ_JRNO010000921.128
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000921.128.fna -queryname NZ_JRNO010000921.128
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000921.128.fna -queryname NZ_JRNO010000921.128
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000561.12.fna -queryname NZ_AEXO010000561.12
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000561.12.fna -queryname NZ_AEXO010000561.12
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000561.12.fna -queryname NZ_AEXO010000561.12
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000611.129.fna -queryname NZ_JRNO010000611.129
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000611.129.fna -queryname NZ_JRNO010000611.129
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000611.129.fna -queryname NZ_JRNO010000611.129
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000021.130.fna -queryname NZ_JRNO010000021.130
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000021.130.fna -queryname NZ_JRNO010000021.130
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000021.130.fna -queryname NZ_JRNO010000021.130
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000961.131.fna -queryname NZ_JRNO010000961.131
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000961.131.fna -queryname NZ_JRNO010000961.131
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000961.131.fna -queryname NZ_JRNO010000961.131
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000161.132.fna -queryname NZ_JRNO010000161.132
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000161.132.fna -queryname NZ_JRNO010000161.132
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000161.132.fna -queryname NZ_JRNO010000161.132
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000721.133.fna -queryname NZ_JRNO010000721.133
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000721.133.fna -queryname NZ_JRNO010000721.133
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000721.133.fna -queryname NZ_JRNO010000721.133
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000301.134.fna -queryname NZ_JRNO010000301.134
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000301.134.fna -queryname NZ_JRNO010000301.134
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000301.134.fna -queryname NZ_JRNO010000301.134
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000241.135.fna -queryname NZ_JRNO010000241.135
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000241.135.fna -queryname NZ_JRNO010000241.135
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000241.135.fna -queryname NZ_JRNO010000241.135
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000061.136.fna -queryname NZ_JRNO010000061.136
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000061.136.fna -queryname NZ_JRNO010000061.136
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000061.136.fna -queryname NZ_JRNO010000061.136
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000281.137.fna -queryname NZ_JRNO010000281.137
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000281.137.fna -queryname NZ_JRNO010000281.137
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000281.137.fna -queryname NZ_JRNO010000281.137
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000221.138.fna -queryname NZ_JRNO010000221.138
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000221.138.fna -queryname NZ_JRNO010000221.138
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000221.138.fna -queryname NZ_JRNO010000221.138
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000981.13.fna -queryname NZ_AEXO010000981.13
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000981.13.fna -queryname NZ_AEXO010000981.13
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000981.13.fna -queryname NZ_AEXO010000981.13
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000581.139.fna -queryname NZ_JRNO010000581.139
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000581.139.fna -queryname NZ_JRNO010000581.139
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000581.139.fna -queryname NZ_JRNO010000581.139
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000041.140.fna -queryname NZ_JRNO010000041.140
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000041.140.fna -queryname NZ_JRNO010000041.140
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000041.140.fna -queryname NZ_JRNO010000041.140
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000391.141.fna -queryname NZ_JRNO010000391.141
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000391.141.fna -queryname NZ_JRNO010000391.141
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000391.141.fna -queryname NZ_JRNO010000391.141
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000551.142.fna -queryname NZ_JRNO010000551.142
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000551.142.fna -queryname NZ_JRNO010000551.142
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000551.142.fna -queryname NZ_JRNO010000551.142
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000141.143.fna -queryname NZ_JRNO010000141.143
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000141.143.fna -queryname NZ_JRNO010000141.143
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000141.143.fna -queryname NZ_JRNO010000141.143
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000911.144.fna -queryname NZ_JRNO010000911.144
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000911.144.fna -queryname NZ_JRNO010000911.144
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000911.144.fna -queryname NZ_JRNO010000911.144
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000911.144.AOI.fna -queryname NZ_JRNO010000911.144
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000911.144.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000911.144.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -queryname NZ_JRNO010000911.144
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -table NZ_JRNO010000911.144.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000461.145.fna -queryname NZ_JRNO010000461.145
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000461.145.fna -queryname NZ_JRNO010000461.145
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000461.145.fna -queryname NZ_JRNO010000461.145
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000411.146.fna -queryname NZ_JRNO010000411.146
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000411.146.fna -queryname NZ_JRNO010000411.146
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000411.146.fna -queryname NZ_JRNO010000411.146
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000481.147.fna -queryname NZ_JRNO010000481.147
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000481.147.fna -queryname NZ_JRNO010000481.147
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000481.147.fna -queryname NZ_JRNO010000481.147
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000931.148.fna -queryname NZ_JRNO010000931.148
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000931.148.fna -queryname NZ_JRNO010000931.148
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000931.148.fna -queryname NZ_JRNO010000931.148
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000761.14.fna -queryname NZ_AEXO010000761.14
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000761.14.fna -queryname NZ_AEXO010000761.14
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000761.14.fna -queryname NZ_AEXO010000761.14
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000781.149.fna -queryname NZ_JRNO010000781.149
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000781.149.fna -queryname NZ_JRNO010000781.149
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000781.149.fna -queryname NZ_JRNO010000781.149
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000981.150.fna -queryname NZ_JRNO010000981.150
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000981.150.fna -queryname NZ_JRNO010000981.150
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000981.150.fna -queryname NZ_JRNO010000981.150
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000201.151.fna -queryname NZ_JRNO010000201.151
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000201.151.fna -queryname NZ_JRNO010000201.151
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000201.151.fna -queryname NZ_JRNO010000201.151
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000711.152.fna -queryname NZ_JRNO010000711.152
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000711.152.fna -queryname NZ_JRNO010000711.152
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000711.152.fna -queryname NZ_JRNO010000711.152
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000111.153.fna -queryname NZ_JRNO010000111.153
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000111.153.fna -queryname NZ_JRNO010000111.153
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000111.153.fna -queryname NZ_JRNO010000111.153
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000191.154.fna -queryname NZ_JRNO010000191.154
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000191.154.fna -queryname NZ_JRNO010000191.154
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000191.154.fna -queryname NZ_JRNO010000191.154
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000261.155.fna -queryname NZ_JRNO010000261.155
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000261.155.fna -queryname NZ_JRNO010000261.155
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000261.155.fna -queryname NZ_JRNO010000261.155
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000741.156.fna -queryname NZ_JRNO010000741.156
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000741.156.fna -queryname NZ_JRNO010000741.156
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000741.156.fna -queryname NZ_JRNO010000741.156
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000811.157.fna -queryname NZ_JRNO010000811.157
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000811.157.fna -queryname NZ_JRNO010000811.157
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000811.157.fna -queryname NZ_JRNO010000811.157
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000381.158.fna -queryname NZ_JRNO010000381.158
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000381.158.fna -queryname NZ_JRNO010000381.158
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000381.158.fna -queryname NZ_JRNO010000381.158
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000931.15.fna -queryname NZ_AEXO010000931.15
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000931.15.fna -queryname NZ_AEXO010000931.15
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000931.15.fna -queryname NZ_AEXO010000931.15
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000511.159.fna -queryname NZ_JRNO010000511.159
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000511.159.fna -queryname NZ_JRNO010000511.159
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000511.159.fna -queryname NZ_JRNO010000511.159
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000151.160.fna -queryname NZ_JRNO010000151.160
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000151.160.fna -queryname NZ_JRNO010000151.160
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000151.160.fna -queryname NZ_JRNO010000151.160
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000371.161.fna -queryname NZ_JRNO010000371.161
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000371.161.fna -queryname NZ_JRNO010000371.161
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000371.161.fna -queryname NZ_JRNO010000371.161
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000851.162.fna -queryname NZ_JRNO010000851.162
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000851.162.fna -queryname NZ_JRNO010000851.162
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000851.162.fna -queryname NZ_JRNO010000851.162
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000771.163.fna -queryname NZ_JRNO010000771.163
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000771.163.fna -queryname NZ_JRNO010000771.163
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000771.163.fna -queryname NZ_JRNO010000771.163
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000451.164.fna -queryname NZ_JRNO010000451.164
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000451.164.fna -queryname NZ_JRNO010000451.164
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000451.164.fna -queryname NZ_JRNO010000451.164
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000791.165.fna -queryname NZ_JRNO010000791.165
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000791.165.fna -queryname NZ_JRNO010000791.165
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000791.165.fna -queryname NZ_JRNO010000791.165
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000271.166.fna -queryname NZ_JRNO010000271.166
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000271.166.fna -queryname NZ_JRNO010000271.166
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000271.166.fna -queryname NZ_JRNO010000271.166
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000601.167.fna -queryname NZ_JRNO010000601.167
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000601.167.fna -queryname NZ_JRNO010000601.167
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000601.167.fna -queryname NZ_JRNO010000601.167
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000631.168.fna -queryname NZ_JRNO010000631.168
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000631.168.fna -queryname NZ_JRNO010000631.168
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000631.168.fna -queryname NZ_JRNO010000631.168
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000081.16.fna -queryname NZ_AEXO010000081.16
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000081.16.fna -queryname NZ_AEXO010000081.16
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000081.16.fna -queryname NZ_AEXO010000081.16
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000751.169.fna -queryname NZ_JRNO010000751.169
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000751.169.fna -queryname NZ_JRNO010000751.169
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000751.169.fna -queryname NZ_JRNO010000751.169
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000901.170.fna -queryname NZ_JRNO010000901.170
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000901.170.fna -queryname NZ_JRNO010000901.170
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000901.170.fna -queryname NZ_JRNO010000901.170
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000521.171.fna -queryname NZ_JRNO010000521.171
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000521.171.fna -queryname NZ_JRNO010000521.171
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000521.171.fna -queryname NZ_JRNO010000521.171
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000861.172.fna -queryname NZ_JRNO010000861.172
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000861.172.fna -queryname NZ_JRNO010000861.172
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000861.172.fna -queryname NZ_JRNO010000861.172
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000011.173.fna -queryname NZ_JRNO010000011.173
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000011.173.fna -queryname NZ_JRNO010000011.173
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000011.173.fna -queryname NZ_JRNO010000011.173
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000641.174.fna -queryname NZ_JRNO010000641.174
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000641.174.fna -queryname NZ_JRNO010000641.174
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000641.174.fna -queryname NZ_JRNO010000641.174
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000171.175.fna -queryname NZ_JRNO010000171.175
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000171.175.fna -queryname NZ_JRNO010000171.175
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000171.175.fna -queryname NZ_JRNO010000171.175
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000591.176.fna -queryname NZ_JRNO010000591.176
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000591.176.fna -queryname NZ_JRNO010000591.176
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000591.176.fna -queryname NZ_JRNO010000591.176
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000331.177.fna -queryname NZ_JRNO010000331.177
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000331.177.fna -queryname NZ_JRNO010000331.177
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000331.177.fna -queryname NZ_JRNO010000331.177
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000341.178.fna -queryname NZ_JRNO010000341.178
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000341.178.fna -queryname NZ_JRNO010000341.178
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000341.178.fna -queryname NZ_JRNO010000341.178
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000641.17.fna -queryname NZ_AEXO010000641.17
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000641.17.fna -queryname NZ_AEXO010000641.17
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000641.17.fna -queryname NZ_AEXO010000641.17
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000311.179.fna -queryname NZ_JRNO010000311.179
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000311.179.fna -queryname NZ_JRNO010000311.179
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000311.179.fna -queryname NZ_JRNO010000311.179
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000361.180.fna -queryname NZ_JRNO010000361.180
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000361.180.fna -queryname NZ_JRNO010000361.180
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000361.180.fna -queryname NZ_JRNO010000361.180
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000121.181.fna -queryname NZ_JRNO010000121.181
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000121.181.fna -queryname NZ_JRNO010000121.181
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000121.181.fna -queryname NZ_JRNO010000121.181
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000701.182.fna -queryname NZ_JRNO010000701.182
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000701.182.fna -queryname NZ_JRNO010000701.182
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000701.182.fna -queryname NZ_JRNO010000701.182
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000251.183.fna -queryname NZ_JRNO010000251.183
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000251.183.fna -queryname NZ_JRNO010000251.183
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000251.183.fna -queryname NZ_JRNO010000251.183
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000561.184.fna -queryname NZ_JRNO010000561.184
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000561.184.fna -queryname NZ_JRNO010000561.184
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000561.184.fna -queryname NZ_JRNO010000561.184
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000621.185.fna -queryname NZ_JRNO010000621.185
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000621.185.fna -queryname NZ_JRNO010000621.185
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000621.185.fna -queryname NZ_JRNO010000621.185
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000541.186.fna -queryname NZ_JRNO010000541.186
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000541.186.fna -queryname NZ_JRNO010000541.186
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000541.186.fna -queryname NZ_JRNO010000541.186
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000871.187.fna -queryname NZ_JRNO010000871.187
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000871.187.fna -queryname NZ_JRNO010000871.187
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000871.187.fna -queryname NZ_JRNO010000871.187
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000691.188.fna -queryname NZ_JRNO010000691.188
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000691.188.fna -queryname NZ_JRNO010000691.188
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000691.188.fna -queryname NZ_JRNO010000691.188
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000511.18.fna -queryname NZ_AEXO010000511.18
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000511.18.fna -queryname NZ_AEXO010000511.18
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000511.18.fna -queryname NZ_AEXO010000511.18
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000131.189.fna -queryname NZ_JRNO010000131.189
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000131.189.fna -queryname NZ_JRNO010000131.189
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000131.189.fna -queryname NZ_JRNO010000131.189
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000941.190.fna -queryname NZ_JRNO010000941.190
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000941.190.fna -queryname NZ_JRNO010000941.190
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000941.190.fna -queryname NZ_JRNO010000941.190
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000761.191.fna -queryname NZ_JRNO010000761.191
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000761.191.fna -queryname NZ_JRNO010000761.191
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000761.191.fna -queryname NZ_JRNO010000761.191
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000731.192.fna -queryname NZ_JRNO010000731.192
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000731.192.fna -queryname NZ_JRNO010000731.192
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000731.192.fna -queryname NZ_JRNO010000731.192
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000291.193.fna -queryname NZ_JRNO010000291.193
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000291.193.fna -queryname NZ_JRNO010000291.193
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000291.193.fna -queryname NZ_JRNO010000291.193
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000071.194.fna -queryname NZ_JRNO010000071.194
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000071.194.fna -queryname NZ_JRNO010000071.194
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000071.194.fna -queryname NZ_JRNO010000071.194
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000401.195.fna -queryname NZ_JRNO010000401.195
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000401.195.fna -queryname NZ_JRNO010000401.195
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000401.195.fna -queryname NZ_JRNO010000401.195
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000501.196.fna -queryname NZ_JRNO010000501.196
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000501.196.fna -queryname NZ_JRNO010000501.196
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000501.196.fna -queryname NZ_JRNO010000501.196
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000351.197.fna -queryname NZ_JRNO010000351.197
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000351.197.fna -queryname NZ_JRNO010000351.197
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_JRNO010000351.197.fna -queryname NZ_JRNO010000351.197
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_CP0320561.198.fna -queryname NZ_CP0320561.198
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_CP0320561.198.fna -queryname NZ_CP0320561.198
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_CP0320561.198.fna -queryname NZ_CP0320561.198
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_CP0320561.198.AOI.fna -queryname NZ_CP0320561.198
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_CP0320561.198.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_CP0320561.198.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -queryname NZ_CP0320561.198
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -table NZ_CP0320561.198.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000941.1.fna -queryname NZ_AEXO010000941.1
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000941.1.fna -queryname NZ_AEXO010000941.1
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000941.1.fna -queryname NZ_AEXO010000941.1
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000221.19.fna -queryname NZ_AEXO010000221.19
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000221.19.fna -queryname NZ_AEXO010000221.19
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000221.19.fna -queryname NZ_AEXO010000221.19
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_CP0320571.199.fna -queryname NZ_CP0320571.199
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_CP0320571.199.fna -queryname NZ_CP0320571.199
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_CP0320571.199.fna -queryname NZ_CP0320571.199
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_CP0320571.199.AOI.fna -queryname NZ_CP0320571.199
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_CP0320571.199.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_CP0320571.199.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -queryname NZ_CP0320571.199
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -table NZ_CP0320571.199.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_UGTM010000011.200.fna -queryname NZ_UGTM010000011.200
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_UGTM010000011.200.fna -queryname NZ_UGTM010000011.200
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_UGTM010000011.200.fna -queryname NZ_UGTM010000011.200
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_UGTM010000011.200.AOI.fna -queryname NZ_UGTM010000011.200
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_UGTM010000011.200.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_UGTM010000011.200.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -queryname NZ_UGTM010000011.200
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -table NZ_UGTM010000011.200.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_UGTM010000021.201.fna -queryname NZ_UGTM010000021.201
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_UGTM010000021.201.fna -queryname NZ_UGTM010000021.201
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_UGTM010000021.201.fna -queryname NZ_UGTM010000021.201
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_UGTM010000021.201.AOI.fna -queryname NZ_UGTM010000021.201
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_UGTM010000021.201.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_UGTM010000021.201.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -queryname NZ_UGTM010000021.201
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -table NZ_UGTM010000021.201.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_UGTM010000031.202.fna -queryname NZ_UGTM010000031.202
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_UGTM010000031.202.fna -queryname NZ_UGTM010000031.202
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_UGTM010000031.202.fna -queryname NZ_UGTM010000031.202
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001081.20.fna -queryname NZ_AEXO010001081.20
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001081.20.fna -queryname NZ_AEXO010001081.20
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001081.20.fna -queryname NZ_AEXO010001081.20
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001061.21.fna -queryname NZ_AEXO010001061.21
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001061.21.fna -queryname NZ_AEXO010001061.21
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001061.21.fna -queryname NZ_AEXO010001061.21
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000201.22.fna -queryname NZ_AEXO010000201.22
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000201.22.fna -queryname NZ_AEXO010000201.22
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000201.22.fna -queryname NZ_AEXO010000201.22
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000481.23.fna -queryname NZ_AEXO010000481.23
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000481.23.fna -queryname NZ_AEXO010000481.23
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000481.23.fna -queryname NZ_AEXO010000481.23
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000991.24.fna -queryname NZ_AEXO010000991.24
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000991.24.fna -queryname NZ_AEXO010000991.24
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000991.24.fna -queryname NZ_AEXO010000991.24
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000261.25.fna -queryname NZ_AEXO010000261.25
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000261.25.fna -queryname NZ_AEXO010000261.25
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000261.25.fna -queryname NZ_AEXO010000261.25
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000811.26.fna -queryname NZ_AEXO010000811.26
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000811.26.fna -queryname NZ_AEXO010000811.26
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000811.26.fna -queryname NZ_AEXO010000811.26
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000811.26.AOI.fna -queryname NZ_AEXO010000811.26
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000811.26.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000811.26.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -queryname NZ_AEXO010000811.26
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -table NZ_AEXO010000811.26.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000031.27.fna -queryname NZ_AEXO010000031.27
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000031.27.fna -queryname NZ_AEXO010000031.27
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000031.27.fna -queryname NZ_AEXO010000031.27
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000271.28.fna -queryname NZ_AEXO010000271.28
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000271.28.fna -queryname NZ_AEXO010000271.28
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000271.28.fna -queryname NZ_AEXO010000271.28
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000211.2.fna -queryname NZ_AEXO010000211.2
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000211.2.fna -queryname NZ_AEXO010000211.2
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000211.2.fna -queryname NZ_AEXO010000211.2
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000751.29.fna -queryname NZ_AEXO010000751.29
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000751.29.fna -queryname NZ_AEXO010000751.29
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000751.29.fna -queryname NZ_AEXO010000751.29
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000411.30.fna -queryname NZ_AEXO010000411.30
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000411.30.fna -queryname NZ_AEXO010000411.30
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000411.30.fna -queryname NZ_AEXO010000411.30
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001031.31.fna -queryname NZ_AEXO010001031.31
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001031.31.fna -queryname NZ_AEXO010001031.31
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001031.31.fna -queryname NZ_AEXO010001031.31
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000151.32.fna -queryname NZ_AEXO010000151.32
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000151.32.fna -queryname NZ_AEXO010000151.32
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000151.32.fna -queryname NZ_AEXO010000151.32
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000661.33.fna -queryname NZ_AEXO010000661.33
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000661.33.fna -queryname NZ_AEXO010000661.33
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000661.33.fna -queryname NZ_AEXO010000661.33
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000291.34.fna -queryname NZ_AEXO010000291.34
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000291.34.fna -queryname NZ_AEXO010000291.34
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000291.34.fna -queryname NZ_AEXO010000291.34
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000161.35.fna -queryname NZ_AEXO010000161.35
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000161.35.fna -queryname NZ_AEXO010000161.35
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000161.35.fna -queryname NZ_AEXO010000161.35
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000801.36.fna -queryname NZ_AEXO010000801.36
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000801.36.fna -queryname NZ_AEXO010000801.36
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000801.36.fna -queryname NZ_AEXO010000801.36
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000131.37.fna -queryname NZ_AEXO010000131.37
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000131.37.fna -queryname NZ_AEXO010000131.37
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000131.37.fna -queryname NZ_AEXO010000131.37
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001051.38.fna -queryname NZ_AEXO010001051.38
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001051.38.fna -queryname NZ_AEXO010001051.38
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001051.38.fna -queryname NZ_AEXO010001051.38
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001141.3.fna -queryname NZ_AEXO010001141.3
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001141.3.fna -queryname NZ_AEXO010001141.3
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001141.3.fna -queryname NZ_AEXO010001141.3
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000581.39.fna -queryname NZ_AEXO010000581.39
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000581.39.fna -queryname NZ_AEXO010000581.39
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000581.39.fna -queryname NZ_AEXO010000581.39
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000361.40.fna -queryname NZ_AEXO010000361.40
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000361.40.fna -queryname NZ_AEXO010000361.40
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000361.40.fna -queryname NZ_AEXO010000361.40
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001151.41.fna -queryname NZ_AEXO010001151.41
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001151.41.fna -queryname NZ_AEXO010001151.41
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001151.41.fna -queryname NZ_AEXO010001151.41
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000921.42.fna -queryname NZ_AEXO010000921.42
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000921.42.fna -queryname NZ_AEXO010000921.42
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000921.42.fna -queryname NZ_AEXO010000921.42
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000791.43.fna -queryname NZ_AEXO010000791.43
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000791.43.fna -queryname NZ_AEXO010000791.43
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000791.43.fna -queryname NZ_AEXO010000791.43
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000311.44.fna -queryname NZ_AEXO010000311.44
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000311.44.fna -queryname NZ_AEXO010000311.44
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000311.44.fna -queryname NZ_AEXO010000311.44
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000381.45.fna -queryname NZ_AEXO010000381.45
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000381.45.fna -queryname NZ_AEXO010000381.45
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000381.45.fna -queryname NZ_AEXO010000381.45
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001211.46.fna -queryname NZ_AEXO010001211.46
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001211.46.fna -queryname NZ_AEXO010001211.46
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001211.46.fna -queryname NZ_AEXO010001211.46
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000721.47.fna -queryname NZ_AEXO010000721.47
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000721.47.fna -queryname NZ_AEXO010000721.47
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000721.47.fna -queryname NZ_AEXO010000721.47
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000831.48.fna -queryname NZ_AEXO010000831.48
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000831.48.fna -queryname NZ_AEXO010000831.48
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000831.48.fna -queryname NZ_AEXO010000831.48
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001011.4.fna -queryname NZ_AEXO010001011.4
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001011.4.fna -queryname NZ_AEXO010001011.4
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001011.4.fna -queryname NZ_AEXO010001011.4
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000951.49.fna -queryname NZ_AEXO010000951.49
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000951.49.fna -queryname NZ_AEXO010000951.49
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000951.49.fna -queryname NZ_AEXO010000951.49
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000091.50.fna -queryname NZ_AEXO010000091.50
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000091.50.fna -queryname NZ_AEXO010000091.50
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000091.50.fna -queryname NZ_AEXO010000091.50
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000171.51.fna -queryname NZ_AEXO010000171.51
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000171.51.fna -queryname NZ_AEXO010000171.51
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000171.51.fna -queryname NZ_AEXO010000171.51
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001201.52.fna -queryname NZ_AEXO010001201.52
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001201.52.fna -queryname NZ_AEXO010001201.52
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001201.52.fna -queryname NZ_AEXO010001201.52
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000651.53.fna -queryname NZ_AEXO010000651.53
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000651.53.fna -queryname NZ_AEXO010000651.53
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000651.53.fna -queryname NZ_AEXO010000651.53
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000741.54.fna -queryname NZ_AEXO010000741.54
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000741.54.fna -queryname NZ_AEXO010000741.54
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000741.54.fna -queryname NZ_AEXO010000741.54
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001001.55.fna -queryname NZ_AEXO010001001.55
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001001.55.fna -queryname NZ_AEXO010001001.55
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001001.55.fna -queryname NZ_AEXO010001001.55
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000521.56.fna -queryname NZ_AEXO010000521.56
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000521.56.fna -queryname NZ_AEXO010000521.56
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000521.56.fna -queryname NZ_AEXO010000521.56
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000431.57.fna -queryname NZ_AEXO010000431.57
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000431.57.fna -queryname NZ_AEXO010000431.57
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000431.57.fna -queryname NZ_AEXO010000431.57
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000111.58.fna -queryname NZ_AEXO010000111.58
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000111.58.fna -queryname NZ_AEXO010000111.58
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000111.58.fna -queryname NZ_AEXO010000111.58
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000911.5.fna -queryname NZ_AEXO010000911.5
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000911.5.fna -queryname NZ_AEXO010000911.5
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000911.5.fna -queryname NZ_AEXO010000911.5
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000551.59.fna -queryname NZ_AEXO010000551.59
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000551.59.fna -queryname NZ_AEXO010000551.59
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000551.59.fna -queryname NZ_AEXO010000551.59
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000141.60.fna -queryname NZ_AEXO010000141.60
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000141.60.fna -queryname NZ_AEXO010000141.60
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000141.60.fna -queryname NZ_AEXO010000141.60
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000341.61.fna -queryname NZ_AEXO010000341.61
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000341.61.fna -queryname NZ_AEXO010000341.61
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000341.61.fna -queryname NZ_AEXO010000341.61
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000021.62.fna -queryname NZ_AEXO010000021.62
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000021.62.fna -queryname NZ_AEXO010000021.62
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000021.62.fna -queryname NZ_AEXO010000021.62
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000681.63.fna -queryname NZ_AEXO010000681.63
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000681.63.fna -queryname NZ_AEXO010000681.63
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000681.63.fna -queryname NZ_AEXO010000681.63
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000321.64.fna -queryname NZ_AEXO010000321.64
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000321.64.fna -queryname NZ_AEXO010000321.64
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000321.64.fna -queryname NZ_AEXO010000321.64
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000541.65.fna -queryname NZ_AEXO010000541.65
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000541.65.fna -queryname NZ_AEXO010000541.65
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000541.65.fna -queryname NZ_AEXO010000541.65
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000691.66.fna -queryname NZ_AEXO010000691.66
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000691.66.fna -queryname NZ_AEXO010000691.66
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000691.66.fna -queryname NZ_AEXO010000691.66
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001131.67.fna -queryname NZ_AEXO010001131.67
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001131.67.fna -queryname NZ_AEXO010001131.67
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001131.67.fna -queryname NZ_AEXO010001131.67
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001131.67.AOI.fna -queryname NZ_AEXO010001131.67
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001131.67.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010001131.67.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -queryname NZ_AEXO010001131.67
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -table NZ_AEXO010001131.67.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000591.68.fna -queryname NZ_AEXO010000591.68
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000591.68.fna -queryname NZ_AEXO010000591.68
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000591.68.fna -queryname NZ_AEXO010000591.68
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000061.6.fna -queryname NZ_AEXO010000061.6
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000061.6.fna -queryname NZ_AEXO010000061.6
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000061.6.fna -queryname NZ_AEXO010000061.6
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000711.69.fna -queryname NZ_AEXO010000711.69
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000711.69.fna -queryname NZ_AEXO010000711.69
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000711.69.fna -queryname NZ_AEXO010000711.69
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000961.70.fna -queryname NZ_AEXO010000961.70
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000961.70.fna -queryname NZ_AEXO010000961.70
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000961.70.fna -queryname NZ_AEXO010000961.70
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000871.71.fna -queryname NZ_AEXO010000871.71
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000871.71.fna -queryname NZ_AEXO010000871.71
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000871.71.fna -queryname NZ_AEXO010000871.71
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000841.72.fna -queryname NZ_AEXO010000841.72
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000841.72.fna -queryname NZ_AEXO010000841.72
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000841.72.fna -queryname NZ_AEXO010000841.72
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000671.73.fna -queryname NZ_AEXO010000671.73
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000671.73.fna -queryname NZ_AEXO010000671.73
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000671.73.fna -queryname NZ_AEXO010000671.73
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NC_0153111.74.fna -queryname NC_0153111.74
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NC_0153111.74.fna -queryname NC_0153111.74
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NC_0153111.74.fna -queryname NC_0153111.74
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NC_0153111.74.AOI.fna -queryname NC_0153111.74
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NC_0153111.74.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NC_0153111.74.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -queryname NC_0153111.74
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -table NC_0153111.74.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000051.75.fna -queryname NZ_ATWK010000051.75
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000051.75.fna -queryname NZ_ATWK010000051.75
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000051.75.fna -queryname NZ_ATWK010000051.75
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000281.76.fna -queryname NZ_ATWK010000281.76
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000281.76.fna -queryname NZ_ATWK010000281.76
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000281.76.fna -queryname NZ_ATWK010000281.76
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000201.77.fna -queryname NZ_ATWK010000201.77
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000201.77.fna -queryname NZ_ATWK010000201.77
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000201.77.fna -queryname NZ_ATWK010000201.77
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000391.78.fna -queryname NZ_ATWK010000391.78
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000391.78.fna -queryname NZ_ATWK010000391.78
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000391.78.fna -queryname NZ_ATWK010000391.78
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000621.7.fna -queryname NZ_AEXO010000621.7
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000621.7.fna -queryname NZ_AEXO010000621.7
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000621.7.fna -queryname NZ_AEXO010000621.7
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000341.79.fna -queryname NZ_ATWK010000341.79
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000341.79.fna -queryname NZ_ATWK010000341.79
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000341.79.fna -queryname NZ_ATWK010000341.79
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000161.80.fna -queryname NZ_ATWK010000161.80
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000161.80.fna -queryname NZ_ATWK010000161.80
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000161.80.fna -queryname NZ_ATWK010000161.80
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000351.81.fna -queryname NZ_ATWK010000351.81
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000351.81.fna -queryname NZ_ATWK010000351.81
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000351.81.fna -queryname NZ_ATWK010000351.81
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000331.82.fna -queryname NZ_ATWK010000331.82
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000331.82.fna -queryname NZ_ATWK010000331.82
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000331.82.fna -queryname NZ_ATWK010000331.82
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000291.83.fna -queryname NZ_ATWK010000291.83
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000291.83.fna -queryname NZ_ATWK010000291.83
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000291.83.fna -queryname NZ_ATWK010000291.83
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000071.84.fna -queryname NZ_ATWK010000071.84
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000071.84.fna -queryname NZ_ATWK010000071.84
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000071.84.fna -queryname NZ_ATWK010000071.84
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000231.85.fna -queryname NZ_ATWK010000231.85
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000231.85.fna -queryname NZ_ATWK010000231.85
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000231.85.fna -queryname NZ_ATWK010000231.85
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000041.86.fna -queryname NZ_ATWK010000041.86
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000041.86.fna -queryname NZ_ATWK010000041.86
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000041.86.fna -queryname NZ_ATWK010000041.86
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000411.87.fna -queryname NZ_ATWK010000411.87
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000411.87.fna -queryname NZ_ATWK010000411.87
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000411.87.fna -queryname NZ_ATWK010000411.87
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000251.88.fna -queryname NZ_ATWK010000251.88
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000251.88.fna -queryname NZ_ATWK010000251.88
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000251.88.fna -queryname NZ_ATWK010000251.88
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000071.8.fna -queryname NZ_AEXO010000071.8
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000071.8.fna -queryname NZ_AEXO010000071.8
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_AEXO010000071.8.fna -queryname NZ_AEXO010000071.8
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000241.89.fna -queryname NZ_ATWK010000241.89
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000241.89.fna -queryname NZ_ATWK010000241.89
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000241.89.fna -queryname NZ_ATWK010000241.89
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000101.90.fna -queryname NZ_ATWK010000101.90
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000101.90.fna -queryname NZ_ATWK010000101.90
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000101.90.fna -queryname NZ_ATWK010000101.90
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000151.91.fna -queryname NZ_ATWK010000151.91
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000151.91.fna -queryname NZ_ATWK010000151.91
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000151.91.fna -queryname NZ_ATWK010000151.91
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000081.92.fna -queryname NZ_ATWK010000081.92
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000081.92.fna -queryname NZ_ATWK010000081.92
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000081.92.fna -queryname NZ_ATWK010000081.92
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000221.93.fna -queryname NZ_ATWK010000221.93
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000221.93.fna -queryname NZ_ATWK010000221.93
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000221.93.fna -queryname NZ_ATWK010000221.93
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000141.94.fna -queryname NZ_ATWK010000141.94
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000141.94.fna -queryname NZ_ATWK010000141.94
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000141.94.fna -queryname NZ_ATWK010000141.94
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000141.94.AOI.fna -queryname NZ_ATWK010000141.94
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000141.94.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000141.94.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -queryname NZ_ATWK010000141.94
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -table NZ_ATWK010000141.94.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000031.95.fna -queryname NZ_ATWK010000031.95
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/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000131.96.fna -queryname NZ_ATWK010000131.96
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/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000131.96.fna -queryname NZ_ATWK010000131.96
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000131.96.AOI.fna -queryname NZ_ATWK010000131.96
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000131.96.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000131.96.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -queryname NZ_ATWK010000131.96
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/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000061.97.fna -queryname NZ_ATWK010000061.97
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/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000011.98.fna -queryname NZ_ATWK010000011.98
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/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result/NZ_ATWK010000011.98.fna -queryname NZ_ATWK010000011.98
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_denticola.result