{
"AOIs": [ 
{
"name": "NZ_CP0245951.2409.AOI_01",
"filename": "/data/pg-molgen/USERS/Vicky/Genomes_Bacteroidales/Porphyromonadaceae/Porphyromonas_gingivalis/GCF_000007585.1_ASM758v1_genomic.fna",
"color": "gray",
"yline": 10,
"xstart": 5,
"points": [ {"x":0,"y":10}, {"x":800,"y":10} ]
}
],
"Genes": [
{
"name": "orf00005",
"orfname": "orf00005",
"gene_start": 1146,
"gene_end": 2450,
"gene_strand": "-",
"real_start": 693112,
"real_end": 694416 ,
"real_strand": "+",
"name": "orf00005",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     8.51245147239845,
"motifs":    "",
"function":  "",
"annotation":"",
"protein":"MKVFKFLASMVLFAGLFAACNKEDNDLINSTSDEAATLATMYPNAQNVRWEQEGEFRVAEFMNEGVKSEAWFLRSIWQYTEIDIPYSALPKAVRAAFEASEYAKWKIEDIDKVERNGTEIFYVIEVEKGDQEVDLFYMPNGKLIKTVKKPHNGSAGQYANPVIPAGVMNTIKAYIASNYPNATILEYEIEDGYIEVDILDGTVHRVLIFTLQGEWVNSHVDDGDDDYDYDDDAYENNIPANIKALIISYVNQNYPGAVIHSIERNSNGTYDVEIYYNNREYDLLFDAQGNFISGNVDDQDDDDNIPAHIKAKIINYVNRNYPGAFIKDIERKSNGTYKAEIVYNNKEYDLLFNAQGNFISGNVDDQDDDDNIPAHIKAKIINYINRNYPGAFIKDIERKSNGRYEAEIVYNNREYDLLFDAQGNFISASLDDKK",
"dna":"ATGAAAGTATTCAAGTTTTTAGCATCGATGGTGCTGTTTGCAGGCTTATTTGCTGCATGTAACAAGGAAGATAACGATCTCATCAATTCGACTTCGGACGAAGCGGCAACTTTGGCTACGATGTATCCCAATGCTCAGAATGTAAGATGGGAGCAAGAAGGTGAATTCCGTGTGGCAGAATTCATGAACGAAGGCGTTAAGTCTGAAGCATGGTTCTTACGAAGCATCTGGCAATACACGGAGATAGACATTCCCTACAGCGCCCTGCCTAAAGCAGTCCGAGCTGCTTTTGAGGCAAGTGAATATGCCAAGTGGAAAATAGAAGACATAGATAAGGTAGAACGTAACGGTACCGAAATATTCTATGTCATAGAAGTAGAAAAGGGAGACCAGGAAGTCGACTTGTTCTACATGCCCAATGGCAAGCTGATCAAAACCGTGAAAAAACCTCACAACGGATCAGCAGGTCAATATGCCAATCCGGTGATTCCGGCAGGAGTAATGAATACCATCAAGGCTTACATCGCTTCCAACTATCCTAATGCAACCATTCTGGAGTACGAGATCGAAGATGGCTACATAGAGGTGGACATTTTGGATGGTACGGTACATCGAGTTCTTATTTTCACACTCCAAGGCGAGTGGGTAAATAGTCATGTGGATGATGGAGATGACGATTATGACTACGATGATGATGCATACGAAAACAACATTCCGGCCAACATCAAGGCTCTGATCATCAGCTATGTCAATCAGAATTACCCGGGAGCTGTCATTCACAGTATCGAGCGTAACTCCAATGGTACCTATGACGTAGAAATTTACTACAACAATAGGGAGTATGATTTGCTGTTCGATGCACAAGGCAACTTCATCAGCGGAAATGTAGACGATCAGGATGATGACGACAATATCCCAGCTCACATCAAGGCTAAGATCATCAATTACGTCAACCGGAACTACCCCGGTGCCTTTATCAAGGACATCGAAAGAAAGTCCAACGGCACATACAAGGCGGAAATCGTGTACAACAACAAGGAGTACGACCTGCTGTTCAATGCACAGGGCAACTTCATCAGCGGAAACGTAGATGATCAGGATGATGATGACAATATCCCTGCTCACATCAAGGCTAAAATCATCAATTACATCAACCGGAACTACCCCGGTGCCTTTATCAAGGACATCGAAAGAAAATCCAATGGCAGATACGAGGCAGAGATTGTCTACAACAACAGGGAGTATGACCTGCTGTTCGATGCACAAGGCAATTTCATCAGTGCGAGCCTGGATGACAAAAAA",
"points": [{"x":5.42562257361992,"y":1},{"x":5.82562257361992,"y":2},{"x":11.599280371177,"y":2},{"x":11.599280371177,"y":0},{"x":5.82562257361992,"y":0}]}
,{
"name": "orf00010",
"orfname": "orf00010",
"gene_start": 2492,
"gene_end": 2929,
"gene_strand": "-",
"real_start": 692633,
"real_end": 693070 ,
"real_strand": "+",
"name": "orf00010",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     12.8325916106429,
"motifs":    "",
"function":  "",
"annotation":"",
"protein":"MKRLKIFLLIIVLAGIKGWAAGDRIIPLNRIPQKAQAVVAKHFAGAKVSYVKMDDDLFSKTYDVVFTNGNKIEFDKKGNWKEIDCKYSRVPSDLVPTPILRHISSQYPDLYIVQIDRDSRDYEVELNNGLELVFSLKGVFKRFHD",
"dna":"ATGAAAAGACTGAAAATTTTTCTTTTGATAATTGTACTGGCCGGGATAAAGGGATGGGCGGCCGGCGATCGTATCATCCCCCTCAATCGCATTCCCCAAAAGGCTCAGGCAGTCGTGGCAAAACACTTTGCAGGTGCTAAGGTATCATACGTAAAGATGGACGACGACTTGTTCAGCAAGACCTATGATGTTGTCTTTACCAATGGCAACAAAATCGAATTCGACAAAAAAGGAAATTGGAAAGAAATAGATTGCAAGTACTCGCGCGTACCCAGCGACTTGGTCCCTACCCCGATATTGCGTCACATATCATCTCAGTATCCCGACCTCTATATCGTTCAAATCGATCGGGATAGTAGAGACTATGAAGTGGAACTGAACAACGGCTTGGAACTCGTATTCTCTCTCAAAGGAGTTTTCAAGCGGTTTCATGAT",
"points": [{"x":11.79812517754,"y":1},{"x":12.19812517754,"y":2},{"x":13.8670580437459,"y":2},{"x":13.8670580437459,"y":0},{"x":12.19812517754,"y":0}]}
,{
"name": "LanK",
"orfname": "orf00011",
"gene_start": 3052,
"gene_end": 4269,
"gene_strand": "-",
"real_start": 691293,
"real_end": 692510 ,
"real_strand": "+",
"name": "LanK",
"color":     "#fff651",
"yline":     10,
"angle":     -60,
"xtext":     17.3302717545687,
"motifs":    "PF02518;PF00512",
"function":  "Sensor protein QseC OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=qseC PE=1 SV=1",
"annotation":"Species='-'<br>match=28.852%|Evalue=5.70e-16<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|P45336|QSEC_HAEIN>sp|P45336|QSEC_HAEIN</a>",
"protein":"VIAFYYVIVEEINDETNDSLENYSEHVIRNILSDNPLTPAENDLNNTYSIREITPQEAMRFAHDIYYDEMVYVKARREMEPCRTMHTVFGDGNGRYYELKVSMPTIEKRDLRETLLEFIIYLYILLLIVTIGVTTWIISRSFRPLYRLIGWIDRFRVNEPVQELVMAKTDVTEFRKLSEAMLRTAHHNVEVFEQQKEFISHASHELQTPLAISRNKLEMLLQDPSLNEQQLEQIYKAIQSINHIVQLNKTLLLYSKIENHQFPEEESIDVNELLHNLAEEYEAIFANRRIRIVWSRSEPMVLSMNPTLAKVLLSNLLKNAYLHNLERDGEIHIDLTSMHCSIANTGVKNALDETLIFERFYHDMKQAHSSGLGLPIARSICQLYGLRLTYRFENGKHTFSIGKEA",
"dna":"GTGATAGCTTTCTATTATGTAATCGTCGAAGAAATAAACGACGAGACGAACGATTCGTTGGAGAACTACTCCGAACATGTCATCCGCAATATCCTCTCCGACAATCCTCTTACACCGGCTGAAAACGACCTTAACAACACTTACTCCATTCGGGAGATTACCCCACAGGAGGCTATGCGTTTCGCTCACGATATTTACTACGATGAGATGGTGTACGTGAAGGCTCGTCGCGAAATGGAGCCCTGCCGGACGATGCATACGGTATTCGGCGACGGCAATGGCAGATACTATGAGCTCAAAGTTTCCATGCCGACCATCGAAAAGAGAGATTTGCGCGAAACGCTGTTAGAGTTTATCATTTATCTCTATATCCTGCTTCTGATCGTTACCATCGGCGTCACCACGTGGATCATATCGCGTAGTTTCCGGCCACTGTATCGACTGATCGGCTGGATAGATCGCTTCCGCGTAAACGAACCTGTACAAGAGTTGGTAATGGCTAAAACGGATGTGACGGAATTCCGCAAGCTCAGTGAGGCCATGCTGCGTACTGCTCACCATAACGTGGAGGTTTTCGAGCAGCAGAAAGAATTTATCTCGCATGCCTCACACGAACTGCAAACACCTCTGGCCATAAGCCGCAATAAACTGGAAATGCTACTGCAAGATCCCTCTTTGAATGAACAGCAGCTCGAACAGATTTATAAGGCTATACAGTCCATCAACCATATTGTACAGCTCAATAAAACCCTCCTCCTCTATAGCAAAATCGAAAACCATCAATTCCCTGAGGAGGAAAGCATAGATGTGAATGAGCTATTGCACAATTTGGCGGAGGAGTATGAAGCGATTTTCGCCAATCGACGTATTCGCATTGTATGGAGCAGAAGTGAACCAATGGTTCTATCAATGAACCCGACTTTGGCCAAAGTCTTGCTAAGCAACCTGCTTAAGAACGCATACTTGCACAATCTTGAAAGAGATGGAGAGATCCATATCGATCTCACCTCTATGCATTGCAGCATAGCGAATACGGGGGTGAAGAACGCTTTGGACGAGACCTTGATATTCGAACGTTTCTATCACGATATGAAACAGGCTCATTCTTCCGGCTTGGGGCTTCCCATTGCACGCTCTATATGCCAGCTGTACGGACTCCGACTGACTTATCGCTTCGAGAATGGGAAACACACTTTTTCCATCGGCAAGGAAGCA",
"points": [{"x":14.4493892623805,"y":1},{"x":14.8493892623805,"y":2},{"x":20.2111542467569,"y":2},{"x":20.2111542467569,"y":0},{"x":14.8493892623805,"y":0}]}
,{
"name": "LanR",
"orfname": "orf00012",
"gene_start": 4332,
"gene_end": 5021,
"gene_strand": "-",
"real_start": 690541,
"real_end": 691230 ,
"real_strand": "+",
"name": "LanR",
"color":     "#fff651",
"yline":     10,
"angle":     -60,
"xtext":     22.1404223084935,
"motifs":    "PF00072;PF00486",
"function":  "Transcriptional regulatory protein DltR OS=Streptococcus agalactiae serotype V (strain ATCC BAA-611 / 2603 V/R) OX=208435 GN=dltR PE=3 SV=1",
"annotation":"Species='-'<br>match=38.326%|Evalue=3.78e-42<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|P0A4I0|DLTR_STRA5>sp|P0A4I0|DLTR_STRA5</a>",
"protein":"MKILIIEDEPDLRETIQKFLLGERYIVETAATMNEGLDKVLVYDYDCILLDIMLPDGNGLTLLKELKKRGKTENLIIISAKDAIEDKVQGIELGADDYLTKPFHLLELNARIKGLIRRKTAHGAMEIKLGNVSLVPDRFEVAVKGHPLELKRKEYDILYHLMTRPNRLVDKAALAEAVWGDYIDQADNYDFVYAQIKNLRKQMNDAGATIEIKSVYGFGYKLIEREEDT",
"dna":"ATGAAAATCCTCATTATCGAAGATGAACCGGATCTGAGGGAAACTATCCAAAAGTTTCTCCTCGGGGAAAGGTATATCGTAGAGACAGCTGCAACGATGAACGAAGGCTTGGACAAGGTGCTGGTGTACGACTACGACTGTATCCTGCTGGACATTATGCTGCCCGACGGCAATGGGCTTACCCTTTTGAAGGAACTGAAAAAGAGAGGAAAAACAGAGAACCTGATCATCATCTCTGCCAAAGACGCGATCGAGGACAAGGTGCAGGGGATCGAACTGGGTGCGGATGATTATCTGACAAAGCCATTCCATCTCCTGGAATTGAACGCCAGAATCAAAGGACTTATCCGACGCAAAACGGCTCATGGAGCCATGGAAATCAAACTCGGAAATGTGTCTTTGGTACCGGACAGGTTCGAAGTTGCGGTCAAGGGGCATCCCTTGGAATTGAAGCGAAAAGAATACGATATCCTGTATCACCTGATGACCCGACCGAACCGATTGGTGGATAAGGCCGCTCTGGCAGAAGCCGTTTGGGGAGACTATATAGACCAAGCGGACAATTATGACTTTGTCTATGCTCAAATCAAAAATCTGCGCAAGCAGATGAACGATGCAGGGGCGACGATCGAGATCAAATCGGTATATGGATTCGGTTATAAACTCATAGAAAGAGAAGAAGATACT",
"points": [{"x":20.5094214563015,"y":1},{"x":20.9094214563015,"y":2},{"x":23.7714231606855,"y":2},{"x":23.7714231606855,"y":0},{"x":20.9094214563015,"y":0}]}
,{
"name": "sORF_1",
"orfname": "sORF_1",
"gene_start": 5095,
"gene_end": 5250,
"gene_strand": "+",
"real_start": 690312,
"real_end": 690467 ,
"real_strand": "-",
"name": "sORF_1",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     24.4886847836379,
"motifs":    "RBS=AATTTTTCCTGAAATAGC<br>",
"function":  "",
"annotation":"",
"protein":"MLSLCSPGMCGYFTPVFWGRGANSVALFYIFVPRRFARISANEVFQSLKNRx",
"dna":"ATGCTCTCCCTTTGCAGTCCTGGGATGTGCGGATATTTTACGCCTGTGTTTTGGGGACGAGGTGCAAATTCGGTGGCACTTTTTTATATCTTTGTCCCAAGACGATTTGCTCGAATCTCAGCAAACGAAGTCTTTCAATCACTTAAAAACAGATAG",
"points": [{"x":24.1217687718966,"y":0},{"x":24.1217687718966,"y":2},{"x":24.4556007953792,"y":2},{"x":24.8556007953792,"y":1},{"x":24.4556007953792,"y":0}]}
,{
"name": "sORF_22",
"orfname": "sORF_22",
"gene_start": 5132,
"gene_end": 5236,
"gene_strand": "-",
"real_start": 690326,
"real_end": 690430 ,
"real_strand": "+",
"name": "sORF_22",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     24.5431303853802,
"motifs":    "RBS=ATAACTATCTGTTTTTAA<br>",
"function":  "",
"annotation":"",
"protein":"VIERLRLLRFEQIVLGQRYKKVPPNLHLVPKTQAx",
"dna":"GTGATTGAAAGACTTCGTTTGCTGAGATTCGAGCAAATCGTCTTGGGACAAAGATATAAAAAAGTGCCACCGAATTTGCACCTCGTCCCCAAAACACAGGCGTAA",
"points": [{"x":24.2969415775021,"y":1},{"x":24.6969415775021,"y":2},{"x":24.7893191932582,"y":2},{"x":24.7893191932582,"y":0},{"x":24.6969415775021,"y":0}]}
,{
"name": "orf00017",
"orfname": "orf00017",
"gene_start": 5271,
"gene_end": 5861,
"gene_strand": "+",
"real_start": 689701,
"real_end": 690291 ,
"real_strand": "-",
"name": "orf00017",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     26.3516712432535,
"motifs":    "",
"function":  "Gamma-D-glutamyl-L-lysine dipeptidyl-peptidase OS=Bacillus cereus (strain ATCC 10987 / NRS 248) OX=222523 GN=ykfC PE=1 SV=1",
"annotation":"Species='-'<br>match=33.577%|Evalue=6.75e-16<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|Q736M3|YKFC_BACC1>sp|Q736M3|YKFC_BACC1</a>",
"protein":"VRIALLTLIGILFSSPSLVRAQSLFSTEHVLQLYNKILYGESAADTVAEKTAGESAFPFIDKLINLGRTFLGKPYRYRGPSPWPMDCSGYVSYLYSKFDIKLPRGAAAQSQYTNPIEREDVRPGDLLFFKGRNARSNRIGHVALVVSVDEDDITMMHSRNSRGIVIEKLNRSAYFSRRLVSYGRVPGAKRVIPRKS",
"dna":"GTGCGAATAGCACTTCTCACGCTGATAGGCATTCTTTTTTCCTCACCTTCTCTTGTTCGGGCGCAAAGTCTTTTCAGTACCGAACATGTCTTGCAACTATACAACAAGATACTCTATGGAGAGTCAGCGGCGGATACCGTCGCAGAGAAAACGGCAGGTGAGTCGGCATTTCCTTTTATAGACAAACTCATCAATCTCGGCCGCACTTTCCTCGGCAAACCATATCGCTATCGCGGTCCTTCCCCATGGCCGATGGACTGCTCGGGCTATGTGTCTTACCTCTACTCCAAATTCGACATCAAACTCCCACGTGGTGCGGCAGCACAGAGCCAATATACGAATCCTATCGAGCGCGAGGATGTTCGTCCGGGCGACCTCCTTTTTTTCAAAGGCCGCAATGCACGCAGCAACCGTATCGGGCATGTAGCTTTGGTCGTATCTGTCGATGAAGATGATATTACCATGATGCACAGCCGCAATTCGCGAGGGATCGTGATCGAAAAACTCAATCGCAGTGCATACTTCTCCCGTCGCTTGGTGAGCTATGGCAGGGTACCCGGAGCCAAGAGAGTGATCCCACGAAAAAGT",
"points": [{"x":24.9550231985607,"y":0},{"x":24.9550231985607,"y":2},{"x":27.3483192879462,"y":2},{"x":27.7483192879462,"y":1},{"x":27.3483192879462,"y":0}]}
,{
"name": "sORF_2",
"orfname": "sORF_2",
"gene_start": 5858,
"gene_end": 5983,
"gene_strand": "+",
"real_start": 689579,
"real_end": 689704 ,
"real_strand": "-",
"name": "sORF_2",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     28.0300160969605,
"motifs":    "RBS=AGTGATCCCACGAAAAAG<br>",
"function":  "",
"annotation":"",
"protein":"LIGLYRNKGRGYPPKGCAAITGFVHSPFRIQPGWIWKEKVLx",
"dna":"TTGATCGGACTATACCGAAACAAGGGTAGGGGCTATCCCCCTAAGGGCTGTGCAGCAATCACCGGATTTGTGCACAGCCCTTTTCGCATACAGCCCGGATGGATTTGGAAGGAGAAAGTATTGTGA",
"points": [{"x":27.7341160874917,"y":0},{"x":27.7341160874917,"y":2},{"x":27.9259161064293,"y":2},{"x":28.3259161064293,"y":1},{"x":27.9259161064293,"y":0}]}
,{
"name": "sORF_21",
"orfname": "sORF_21",
"gene_start": 5867,
"gene_end": 5992,
"gene_strand": "-",
"real_start": 689570,
"real_end": 689695 ,
"real_strand": "+",
"name": "sORF_21",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     28.072625698324,
"motifs":    "RBS=TTTTCTCTCTCTCT<br>",
"function":  "",
"annotation":"",
"protein":"LATSQYFLLPNPSGLYAKRAVHKSGDCCTALRGIAPTLVSVx",
"dna":"TTGGCCACCTCACAATACTTTCTCCTTCCAAATCCATCCGGGCTGTATGCGAAAAGGGCTGTGCACAAATCCGGTGATTGCTGCACAGCCCTTAGGGGGATAGCCCCTACCCTTGTTTCGGTATAG",
"points": [{"x":27.7767256888552,"y":1},{"x":28.1767256888552,"y":2},{"x":28.3685257077928,"y":2},{"x":28.3685257077928,"y":0},{"x":28.1767256888552,"y":0}]}
,{
"name": "sORF_20",
"orfname": "sORF_20",
"gene_start": 5890,
"gene_end": 6069,
"gene_strand": "-",
"real_start": 689493,
"real_end": 689672 ,
"real_strand": "+",
"name": "sORF_20",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     28.3093457058991,
"motifs":    "RBS=CGGCCGGAAAATTTATTT<br>",
"function":  "",
"annotation":"",
"protein":"LLAVGETFPGRKNKFEICIVFFSLSLWPPHNTFSFQIHPGCMRKGLCTNPVIAAQPLGGx",
"dna":"TTGTTAGCTGTCGGGGAAACTTTTCCCGGCCGGAAAAATAAGTTCGAAATATGTATCGTTTTTTTTTCTCTCTCTCTTTGGCCACCTCACAATACTTTCTCCTTCCAAATCCATCCGGGCTGTATGCGAAAAGGGCTGTGCACAAATCCGGTGATTGCTGCACAGCCCTTAGGGGGATAG",
"points": [{"x":27.8856168923397,"y":1},{"x":28.2856168923397,"y":2},{"x":28.7330745194584,"y":2},{"x":28.7330745194584,"y":0},{"x":28.2856168923397,"y":0}]}
,{
"name": "sORF_3",
"orfname": "sORF_3",
"gene_start": 5956,
"gene_end": 6066,
"gene_strand": "+",
"real_start": 689496,
"real_end": 689606 ,
"real_strand": "-",
"name": "sORF_3",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     28.4584793106713,
"motifs":    "RBS=TTTTCGCATACAGCCCGG<br>",
"function":  "",
"annotation":"",
"protein":"MDLEGESIVRWPKRERKKNDTYFELIFPAGKSFPDSx",
"dna":"ATGGATTTGGAAGGAGAAAGTATTGTGAGGTGGCCAAAGAGAGAGAGAAAAAAAAACGATACATATTTCGAACTTATTTTTCCGGCCGGGAAAAGTTTCCCCGACAGCTAA",
"points": [{"x":28.1980873023388,"y":0},{"x":28.1980873023388,"y":2},{"x":28.3188713190039,"y":2},{"x":28.7188713190039,"y":1},{"x":28.3188713190039,"y":0}]}
,{
"name": "orf00022",
"orfname": "orf00022",
"gene_start": 6096,
"gene_end": 6248,
"gene_strand": "-",
"real_start": 689314,
"real_end": 689466 ,
"real_strand": "+",
"name": "orf00022",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     29.220717735063,
"motifs":    "",
"function":  "",
"annotation":"",
"protein":"MIVLSRKKFFLQYRKVEKLYCNSLFKGFGYINEAFGYVSKGFVYISEGFG",
"dna":"ATGATCGTTCTCAGCCGGAAAAAGTTTTTTCTGCAGTACAGAAAAGTTGAAAAGCTATACTGCAATTCTTTATTCAAAGGTTTCGGATATATAAACGAAGCTTTCGGATATGTATCCAAAGGCTTCGTTTATATATCCGAAGGCTTTGGA",
"points": [{"x":28.8609033235489,"y":1},{"x":29.2609033235489,"y":2},{"x":29.580532146577,"y":2},{"x":29.580532146577,"y":0},{"x":29.2609033235489,"y":0}]}
,{
"name": "sORF_19",
"orfname": "sORF_19",
"gene_start": 6255,
"gene_end": 6419,
"gene_strand": "-",
"real_start": 689143,
"real_end": 689307 ,
"real_strand": "+",
"name": "sORF_19",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     30.0018937600606,
"motifs":    "RBS=TCTATAGGAGAACAAGGT<br>",
"function":  "",
"annotation":"",
"protein":"LSDKSVPPLNESINAIAIGAISKTQYAIAGIRISYVNRFITVRFEECSFFTGQQx",
"dna":"TTGTCGGATAAAAGTGTACCGCCCCTGAATGAAAGCATCAATGCAATCGCTATCGGTGCGATAAGCAAGACTCAATATGCTATTGCCGGGATACGAATATCTTACGTAAATCGCTTCATTACAGTACGTTTTGAAGAATGTTCATTTTTTACCGGACAGCAATAA",
"points": [{"x":29.6136729476375,"y":1},{"x":30.0136729476375,"y":2},{"x":30.3901145724837,"y":2},{"x":30.3901145724837,"y":0},{"x":30.0136729476375,"y":0}]}
,{
"name": "sORF_4",
"orfname": "sORF_4",
"gene_start": 6345,
"gene_end": 6452,
"gene_strand": "+",
"real_start": 689110,
"real_end": 689217 ,
"real_strand": "-",
"name": "sORF_4",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     30.2930593693779,
"motifs":    "RBS=TATCCCGGCAATAGCATA<br>",
"function":  "",
"annotation":"",
"protein":"LSLAYRTDSDCIDAFIQGRYTFIRQTLFSYRFNSRx",
"dna":"TTGAGTCTTGCTTATCGCACCGATAGCGATTGCATTGATGCTTTCATTCAGGGGCGGTACACTTTTATCCGACAAACCTTGTTCTCCTATAGATTCAACTCTCGTTAA",
"points": [{"x":30.0397689612726,"y":0},{"x":30.0397689612726,"y":2},{"x":30.1463497774832,"y":2},{"x":30.5463497774832,"y":1},{"x":30.1463497774832,"y":0}]}
,{
"name": "sORF_18",
"orfname": "sORF_18",
"gene_start": 6439,
"gene_end": 6531,
"gene_strand": "-",
"real_start": 689031,
"real_end": 689123 ,
"real_strand": "+",
"name": "sORF_18",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     30.7025849824827,
"motifs":    "RBS=ATCATCGAAAAGATTTTT<br>",
"function":  "",
"annotation":"",
"protein":"LFIVVIYYCIAFYCGTKIRKKLVIPSFNESx",
"dna":"TTGTTCATTGTGGTGATTTATTACTGTATTGCGTTTTATTGTGGAACGAAAATACGAAAGAAACTCGTTATCCCCTCTTTTAACGAGAGTTGA",
"points": [{"x":30.4848025755137,"y":1},{"x":30.8848025755137,"y":2},{"x":30.9203673894518,"y":2},{"x":30.9203673894518,"y":0},{"x":30.8848025755137,"y":0}]}
,{
"name": "orf00028",
"orfname": "orf00028",
"gene_start": 6524,
"gene_end": 8578,
"gene_strand": "+",
"real_start": 686984,
"real_end": 689038 ,
"real_strand": "-",
"name": "orf00028",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     35.7494555439826,
"motifs":    "",
"function":  "Dipeptidyl-peptidase 5 OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / CIP 103683 / JCM 12257 / NCTC 11834 / 2561) OX=431947 GN=dpp5 PE=1 SV=1",
"annotation":"Species='-'<br>match=98.977%|Evalue=0.0<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|B2RIT0|DPP5_PORG3>sp|B2RIT0|DPP5_PORG3</a>",
"protein":"MNKKIFSMMAASIIGSAAMTPSAGTNTGEHLTPELFMTLSRVSEMALSPDGKTAVYAVSFPDVKTNKATRELFTVNLDGSGRKQITDTESNEYAPAWMADGKRIAFMSNEGGSMQLWVMNADGTERRQLSNIEGGITGFLFSPDEKQVLFTKDIKFGKRTKDIYPDLDKATGRIITDLMYKHWDEWVETIPHPFIANATDGMITTGKDIMEGEPYEAPMKPWSGIEDFSWSPDGQNIAYASRKKTGMAYSLSTNSDIYIYNLASGRTHNISEGMMGYDTYPKFSPDGKSIAWISMERDGYESDLKRLFVADLATGKRTHVNPTFDYNVDMIQWAPDSKGIYFLACKEAETNLWEITLKTGKIRQITQGQHDYADFSVRNNVMLAKRHSFELPDDLYRVNLKNGAAQAVTTENKAILDRLTPITCEKRWMKTTDGGNMLTWVVLPPNFDKNKKYPAILYCQGGPQNTVSQFWSFRWNLRLMAEQGYIVIAPNRHGVPGFGQKWNEQISGDYGGQNMRDYLTAVDEMKKEPYVDGDRIGAVGASYGGFSVYWLAGHHDKRFAAFIAHAGIFNLEMQYATTEEMWFANWDIGGPFWEKDNVVAQRTYATSPHKFVQNWDTPILMIHGELDFRILASQAMAAFDAAQLRGVPSEMLIYPDENHWVLQPQNALLFHRTFFGWLDRWLKK",
"dna":"ATGAACAAAAAAATCTTTTCGATGATGGCTGCAAGCATCATTGGTTCGGCTGCTATGACCCCATCAGCCGGAACGAATACCGGAGAGCATTTGACGCCGGAACTATTCATGACCCTGTCGCGGGTGAGCGAAATGGCCTTGTCTCCCGACGGTAAAACGGCTGTTTATGCCGTCAGCTTTCCCGATGTCAAAACGAACAAGGCTACCCGCGAGCTATTTACCGTCAATCTCGATGGCTCGGGGCGTAAGCAGATAACCGACACCGAGTCCAACGAATACGCTCCTGCCTGGATGGCCGACGGTAAGCGTATTGCTTTTATGAGCAACGAAGGCGGCAGCATGCAGCTTTGGGTCATGAACGCCGATGGTACGGAACGCCGCCAACTCAGCAATATCGAAGGTGGTATTACAGGTTTTCTTTTCTCTCCGGACGAGAAACAGGTGCTTTTCACCAAAGACATCAAATTCGGCAAACGCACCAAAGACATTTATCCCGATTTGGACAAAGCTACCGGACGCATCATCACCGATCTGATGTATAAGCATTGGGACGAGTGGGTGGAGACCATACCGCATCCCTTCATCGCGAACGCGACGGATGGAATGATCACCACCGGCAAAGACATCATGGAGGGCGAACCCTACGAGGCTCCGATGAAACCGTGGTCGGGTATCGAAGATTTCAGTTGGAGCCCTGACGGACAGAACATAGCATACGCCAGCCGCAAGAAAACGGGCATGGCATATTCTCTGTCTACCAACTCGGACATATATATCTATAATCTGGCTTCCGGCCGGACGCACAACATTTCCGAAGGGATGATGGGCTACGACACCTATCCGAAGTTCAGCCCCGACGGCAAGAGCATTGCATGGATCAGCATGGAGCGCGATGGATATGAAAGCGATCTGAAGCGTCTTTTCGTGGCGGATCTTGCCACAGGAAAGCGCACCCATGTAAACCCCACATTCGATTACAATGTGGATATGATCCAATGGGCACCGGACAGTAAGGGTATCTATTTCCTTGCCTGTAAGGAGGCAGAGACCAATCTGTGGGAGATCACGCTGAAAACGGGTAAGATCCGTCAGATCACGCAAGGACAGCACGACTATGCCGACTTCTCCGTGCGCAACAACGTTATGCTGGCCAAACGCCATTCTTTCGAACTCCCCGACGATCTCTATCGTGTGAATCTGAAGAATGGAGCGGCACAGGCCGTCACGACAGAAAACAAAGCCATCCTCGATCGTCTCACTCCCATCACCTGCGAAAAACGCTGGATGAAGACTACCGATGGAGGCAATATGCTTACATGGGTAGTACTGCCACCCAACTTCGATAAAAACAAGAAATATCCGGCTATACTCTATTGTCAGGGAGGTCCGCAAAATACCGTAAGCCAGTTCTGGTCGTTCCGCTGGAATCTCCGACTGATGGCCGAGCAGGGCTATATCGTCATTGCCCCCAACCGCCATGGTGTACCCGGATTCGGGCAGAAATGGAACGAACAGATCAGTGGCGACTACGGTGGCCAGAATATGCGTGACTATCTGACTGCCGTAGACGAAATGAAGAAAGAACCCTATGTCGATGGCGATCGCATCGGAGCGGTGGGTGCAAGCTACGGTGGCTTCTCCGTCTATTGGTTGGCCGGCCATCATGACAAGCGATTTGCCGCTTTTATCGCTCATGCCGGTATCTTCAATCTGGAGATGCAGTACGCCACGACGGAAGAGATGTGGTTTGCTAATTGGGATATAGGCGGTCCTTTCTGGGAGAAGGATAATGTAGTGGCTCAGCGTACCTATGCAACTTCGCCACACAAGTTCGTGCAGAACTGGGATACACCTATCCTCATGATTCATGGCGAACTGGACTTCCGCATTCTTGCTTCACAGGCTATGGCTGCTTTCGATGCGGCACAGCTTCGTGGCGTTCCGAGCGAGATGCTGATCTATCCGGATGAAAACCACTGGGTACTCCAACCGCAGAATGCATTGCTATTCCATCGTACATTCTTCGGCTGGTTGGATCGTTGGCTGAAGAAG",
"points": [{"x":30.8872265883913,"y":0},{"x":30.8872265883913,"y":2},{"x":40.2116844995739,"y":2},{"x":40.6116844995739,"y":1},{"x":40.2116844995739,"y":0}]}
,{
"name": "orf00030",
"orfname": "orf00030",
"gene_start": 8663,
"gene_end": 9289,
"gene_strand": "+",
"real_start": 686273,
"real_end": 686899 ,
"real_strand": "-",
"name": "orf00030",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     42.4959757598712,
"motifs":    "",
"function":  "D-ribitol-5-phosphate phosphatase OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) OX=226186 GN=BT_0970 PE=1 SV=1",
"annotation":"Species='-'<br>match=45.098%|Evalue=3.35e-61<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|Q8A947|RIBX_BACTN>sp|Q8A947|RIBX_BACTN</a>",
"protein":"MIRNIVFDLGGVLIHLNREESIRRFKAIGVADIEEMLDPYLQKGLFLDLESGRKSEAEFRTELSRHIGEELTYQQVYDALLGFLEEISAEKFDYIDSLRPDYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDNGENWIPAITRLLREQK",
"dna":"ATGATCAGGAACATCGTATTCGACCTCGGTGGAGTTCTCATTCACCTCAACCGAGAAGAATCCATCCGCCGATTCAAAGCCATAGGAGTAGCAGACATTGAAGAAATGCTCGACCCCTATCTGCAAAAAGGTCTTTTCCTCGACTTGGAGTCCGGGCGAAAGAGCGAGGCGGAATTCCGAACCGAGCTATCCCGACACATAGGAGAAGAATTGACCTATCAGCAGGTGTACGATGCTCTCCTTGGTTTTCTTGAGGAGATTTCGGCCGAAAAGTTCGATTATATCGACTCGCTACGCCCCGATTATCGACTCTTCCTCCTCTCCAACACCAATCCTTATGTCCTCGATTTGGCCATGAGTCCGCGTTTTCTTCCCTCAGGAAGGACGCTGGACAGTTTCTTTGATAAAGTCTATGCCAGTTGTCAGATGGGGAAATACAAACCCAATGAAGATATTTTCCTCGAAATGATAGCCGACAGCGGTATGAAGCCGGAGGAAACCCTCTTCATCGACGACGGACCGGCTAATGTGGCAACAGCCGAACGACTCGGTTTCCACACCTATTGCCCCGACAATGGGGAAAACTGGATCCCTGCCATTACTCGACTCCTTCGCGAACAGAAA",
"points": [{"x":41.0141085124515,"y":0},{"x":41.0141085124515,"y":2},{"x":43.577843007291,"y":2},{"x":43.977843007291,"y":1},{"x":43.577843007291,"y":0}]}
,{
"name": "orf00033",
"orfname": "orf00033",
"gene_start": 9356,
"gene_end": 9775,
"gene_strand": "-",
"real_start": 685787,
"real_end": 686206 ,
"real_strand": "+",
"name": "orf00033",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     45.2869046491809,
"motifs":    "",
"function":  "",
"annotation":"",
"protein":"MGAKKNKNNTMKKALLCFACGALCLATITGCATLFGKQTHAVEMVSNPQGAEVYINGDKMGQTPLQLSLKADKSYTVEFRIPGKQPIIRIINNRVEAKWVVLDVLGGLIPVAIDAITGNWYGLDQNKLNVDFTMQEPTK",
"dna":"ATGGGGGCGAAAAAAAATAAAAACAATACAATGAAAAAAGCATTACTATGCTTCGCTTGCGGTGCACTTTGCTTAGCTACGATTACCGGGTGTGCCACTCTTTTCGGCAAACAGACGCATGCTGTGGAAATGGTTTCCAACCCACAGGGAGCAGAAGTTTACATCAATGGTGACAAGATGGGACAAACGCCCTTGCAACTCTCGCTCAAGGCTGACAAATCCTACACCGTGGAATTTCGCATTCCGGGTAAACAGCCCATCATACGTATAATCAACAACCGTGTGGAAGCCAAGTGGGTGGTATTGGATGTACTCGGTGGTCTTATTCCCGTGGCTATCGATGCTATTACAGGCAACTGGTACGGACTGGATCAGAATAAGCTGAACGTGGACTTCACGATGCAAGAGCCTACGAAA",
"points": [{"x":44.2950478174415,"y":1},{"x":44.6950478174415,"y":2},{"x":46.2787614809204,"y":2},{"x":46.2787614809204,"y":0},{"x":44.6950478174415,"y":0}]}
,{
"name": "sORF_17",
"orfname": "sORF_17",
"gene_start": 9821,
"gene_end": 9934,
"gene_strand": "-",
"real_start": 685628,
"real_end": 685741 ,
"real_strand": "+",
"name": "sORF_17",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     46.7640374964492,
"motifs":    "RBS=GACACACATCGTCTCCTC<br>",
"function":  "",
"annotation":"",
"protein":"LKGSMVFNHIHSLCYFCRPKTRYKSLTEHQKKNISFVx",
"dna":"TTGAAAGGCAGTATGGTTTTTAACCATATACATAGTTTATGTTATTTTTGCCGTCCGAAAACTCGATATAAATCCCTTACGGAACATCAAAAAAAGAACATATCATTTGTATGA",
"points": [{"x":46.4965438878894,"y":1},{"x":46.8965438878894,"y":2},{"x":47.031531105009,"y":2},{"x":47.031531105009,"y":0},{"x":46.8965438878894,"y":0}]}
,{
"name": "105.3;Nigrescin",
"orfname": "orf00034",
"gene_start": 9980,
"gene_end": 11146,
"gene_strand": "-",
"real_start": 684416,
"real_end": 685582 ,
"real_strand": "+",
"name": "105.3;Nigrescin",
"color":     "#70c947",
"yline":     10,
"angle":     -60,
"xtext":     50.009468800303,
"motifs":    "",
"function":  "105.3;Nigrescin",
"annotation":"Evalue=2.11e-110 match=44.063%;",
"protein":"MTMSTILFDDIRPYCDQEAPAVIERLLSSAEYRYVFGKMMPDVKPQEFEQMMLRCKSTGEFKHIFGYTAVKAVSEKTTFSLSLSGRSRIPDNGAYIFISNHRDIVLDSAFLNLLLAEIDYNMPQIAIGDNLLVKPWIEDFVRLNGSFIVRRGINMRELIAQSQRLSAYIRHTITQTKDSIWIAQREGRAKDADDRTQSSVLKMLAMSGKDGGIKSLLDLNIVPLSLSYEYDPCDYLKAREMLCKQRDPLYKKPVGEDLLNMQTGIFGYKGRVHFAIGTPLRELAESIPADAPHARQFTEAGKLIDAEIHRRYRLYPGNYVAWDLLDGCDHAGSHYSEEEKETFVNYLSAQIAKVEMQDKDEEELKRLILIMYANPARAYYAAQDPTNV",
"dna":"ATGACTATGAGTACAATACTATTTGACGACATCAGACCATACTGCGATCAGGAAGCACCGGCCGTAATCGAACGTCTGCTGAGTTCGGCCGAATATCGGTATGTGTTCGGCAAAATGATGCCGGACGTAAAGCCACAGGAGTTCGAACAAATGATGTTGCGCTGCAAATCCACCGGTGAATTCAAACACATCTTCGGCTATACAGCGGTTAAGGCAGTGAGTGAGAAGACGACATTCAGCCTCTCGTTAAGTGGCAGGAGTCGTATCCCTGACAATGGAGCCTACATTTTTATCTCGAACCACCGAGACATCGTATTGGACTCGGCTTTCCTCAACCTGCTGCTTGCTGAGATCGACTACAATATGCCACAGATAGCCATCGGAGACAACCTCCTTGTGAAGCCGTGGATAGAAGACTTCGTACGACTCAACGGGAGCTTTATCGTACGTCGCGGGATCAATATGCGCGAACTGATAGCACAGTCGCAGAGACTATCGGCATACATCCGGCATACGATTACCCAAACGAAAGATTCCATTTGGATAGCCCAACGCGAAGGACGGGCCAAAGATGCCGACGATCGCACGCAGAGCAGTGTGCTCAAGATGCTTGCCATGAGCGGTAAGGACGGAGGAATCAAGAGTCTGCTCGATCTCAACATCGTGCCGCTCTCTTTGAGCTATGAGTATGACCCCTGCGATTACCTGAAAGCGCGCGAAATGCTTTGCAAGCAGCGTGATCCGTTATATAAGAAACCCGTCGGGGAGGATCTGCTGAATATGCAGACAGGTATTTTCGGCTACAAAGGACGTGTTCACTTTGCCATAGGTACACCTCTAAGAGAATTGGCCGAGAGCATCCCGGCAGATGCGCCGCATGCCCGGCAGTTCACAGAGGCAGGCAAGCTGATCGATGCAGAAATCCATCGTCGCTACCGTCTCTACCCGGGCAATTATGTAGCATGGGATCTTCTGGACGGATGCGACCACGCCGGTTCGCATTATAGCGAGGAGGAAAAAGAGACCTTTGTAAACTATCTGTCCGCACAAATCGCCAAAGTGGAGATGCAGGATAAGGATGAAGAGGAATTGAAACGACTGATTCTGATCATGTATGCCAATCCGGCAAGGGCATATTATGCTGCTCAAGATCCGACGAATGTA",
"points": [{"x":47.249313511978,"y":1},{"x":47.649313511978,"y":2},{"x":52.769624088628,"y":2},{"x":52.769624088628,"y":0},{"x":47.649313511978,"y":0}]}
,{
"name": "orf00035",
"orfname": "orf00035",
"gene_start": 11165,
"gene_end": 12160,
"gene_strand": "-",
"real_start": 683402,
"real_end": 684397 ,
"real_strand": "+",
"name": "orf00035",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     55.2149417668781,
"motifs":    "",
"function":  "D-alanine--D-alanine ligase OS=Porphyromonas gingivalis (strain ATCC BAA-308 / W83) OX=242619 GN=ddl PE=3 SV=1",
"annotation":"Species='-'<br>match=99.394%|Evalue=0.0<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|Q7MWA2|DDL_PORGI>sp|Q7MWA2|DDL_PORGI</a>",
"protein":"MMKKPIVAVIAGGYSGEHSVSLKSAAGILSWLGSEPFSAFLVLIERDRWSVRVSEQREVPLDKNDFSFDLDGERIRFDYAYITIHGTPGENGLLQGYLDMIGIPYNTGDALVESLTFNKYVCNRFLSGFGIRIADSMRLTGRDTQPDVADLIARMGLPLFVKPNVGGSSIATTKVVEAAQLLPAIEQAFSEGEEVMIERLICGTEVTCGAFLRKKEVVALPVTEVVAHNEFFDFDAKYNGAVEEITPARISDEATRLIQTMTARIYELLNARGIIRVDYIIEADGIPTLLEVNTTPGMTPTSFIPQQVRAAGMDMKEVLCTIIRDGLNETQ",
"dna":"ATGATGAAAAAACCAATTGTGGCTGTCATTGCAGGCGGTTATTCGGGCGAACATTCGGTTTCGCTCAAAAGTGCTGCCGGCATTCTGTCCTGGCTGGGAAGCGAGCCTTTCTCCGCCTTTCTTGTTCTGATCGAACGTGATCGCTGGTCGGTAAGAGTATCGGAGCAGAGAGAGGTTCCACTGGATAAGAACGATTTCAGCTTTGATCTCGATGGCGAACGAATACGGTTTGACTATGCTTATATCACCATACATGGAACTCCGGGAGAGAACGGTCTGCTTCAGGGGTATCTCGACATGATCGGCATCCCATACAATACGGGTGACGCGCTCGTCGAATCCCTGACTTTCAACAAATATGTGTGCAATCGTTTTCTCTCCGGCTTCGGTATCCGCATTGCCGATTCTATGCGACTGACCGGGCGAGATACTCAGCCCGATGTGGCGGATCTGATAGCACGTATGGGGCTTCCTCTTTTCGTGAAACCCAATGTGGGAGGTTCCAGCATCGCGACTACCAAGGTGGTGGAAGCTGCACAGCTCCTTCCGGCAATAGAACAAGCCTTCTCGGAAGGCGAAGAGGTAATGATAGAGCGTCTGATATGCGGTACCGAGGTTACCTGCGGGGCATTCCTCAGAAAAAAAGAAGTGGTCGCATTGCCTGTTACAGAAGTTGTCGCACATAATGAGTTTTTCGACTTCGATGCCAAATACAACGGAGCTGTAGAGGAAATCACACCGGCGAGAATCAGCGATGAAGCCACTCGATTGATACAGACCATGACTGCGCGCATATACGAGCTTCTCAACGCTCGGGGCATCATACGTGTGGACTATATCATCGAAGCGGATGGTATTCCCACGCTGCTGGAAGTGAACACGACACCGGGCATGACCCCTACGAGCTTTATCCCCCAGCAGGTTCGAGCAGCCGGAATGGATATGAAAGAGGTGCTTTGCACTATCATTCGGGATGGACTGAATGAGACCCAA",
"points": [{"x":52.8595776915065,"y":1},{"x":53.2595776915065,"y":2},{"x":57.5703058422498,"y":2},{"x":57.5703058422498,"y":0},{"x":53.2595776915065,"y":0}]}
,{
"name": "orf00037",
"orfname": "orf00037",
"gene_start": 12224,
"gene_end": 13345,
"gene_strand": "-",
"real_start": 682217,
"real_end": 683338 ,
"real_strand": "+",
"name": "orf00037",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     60.526938736862,
"motifs":    "",
"function":  "Uncharacterized RNA pseudouridine synthase Cpar_0723 OS=Chlorobaculum parvum (strain NCIB 8327) OX=517417 GN=Cpar_0723 PE=3 SV=1",
"annotation":"Species='-'<br>match=47.484%|Evalue=9.43e-99<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|O50310|Y723_CHLP8>sp|O50310|Y723_CHLP8</a>",
"protein":"MEEELQYRMTPEMAELFDEDDAEDISDGGLDPEEEDRYEHFRTVADPGQTLIRIDKFLVDRMNNATRSRIQQAAEAGAIFVNGRPVKSNYRIKPGDVVTLELLRPRRELEIIPEDIPLDIVYEDDVLLVINKPAGLVVHPGHGNYTGTLVNALAYYLREDLEYDPMDPSLGLVHRIDKDTSGLLVVAKRAEAKSDLCKQFYYKTTHRSYRALVWGRFDYPIGTITGNIGRDLKDRLQMAVFPSDGDIGKPAVTHYQVLEELAYVSWIECRLETGRTHQIRAHMKHIGHTLFADERYGGDQILRGNNTANYRRFVQNCLAICPRQALHAKTLGFRHPVTGVEMQFDSDIPADLTTLLERWRTFIACISAGQDYI",
"dna":"ATGGAGGAAGAACTTCAGTATCGGATGACTCCCGAGATGGCGGAGCTATTCGACGAAGATGATGCAGAGGACATCTCGGACGGCGGACTCGACCCGGAGGAAGAGGACAGATACGAACATTTCCGCACTGTAGCAGATCCGGGACAGACACTTATTCGTATCGACAAATTCCTTGTCGACAGGATGAACAACGCCACACGCAGCCGTATCCAACAAGCGGCTGAAGCCGGTGCCATATTCGTCAATGGCCGACCGGTAAAGAGCAACTACCGGATCAAACCGGGCGATGTGGTCACGTTGGAACTCCTCCGACCACGACGGGAATTGGAGATCATTCCCGAAGATATTCCACTCGATATAGTGTATGAAGACGATGTACTGCTCGTGATCAATAAGCCTGCCGGATTAGTGGTGCACCCCGGCCATGGCAATTACACGGGTACACTGGTCAATGCACTGGCCTACTACCTCCGAGAGGATCTTGAATACGACCCCATGGATCCGAGTCTGGGACTCGTACACCGTATAGACAAGGACACGAGCGGCCTTCTGGTTGTTGCCAAGAGGGCCGAAGCCAAATCGGACTTGTGCAAGCAATTCTATTATAAGACGACGCATCGTTCCTATCGTGCACTGGTATGGGGACGTTTCGACTACCCGATCGGAACCATTACCGGCAATATAGGACGCGACCTGAAAGACCGCCTGCAAATGGCGGTATTCCCTTCCGATGGAGATATTGGCAAACCGGCCGTAACGCATTATCAGGTCTTGGAAGAACTGGCATACGTCAGCTGGATAGAATGCCGTCTGGAGACAGGGCGTACCCATCAGATCAGGGCACACATGAAGCACATAGGCCATACGCTGTTTGCTGACGAGCGTTATGGCGGCGATCAAATCCTGAGAGGAAACAATACGGCCAATTACCGCAGATTCGTGCAGAACTGTTTGGCTATCTGTCCACGACAGGCTCTGCATGCCAAGACATTAGGCTTTCGCCATCCTGTCACGGGAGTGGAGATGCAGTTCGACTCCGATATACCTGCCGATCTTACCACTTTGCTTGAGCGTTGGCGTACGTTTATCGCCTGCATATCTGCAGGACAGGACTATATC",
"points": [{"x":57.8733074519458,"y":1},{"x":58.2733074519458,"y":2},{"x":63.1805700217782,"y":2},{"x":63.1805700217782,"y":0},{"x":58.2733074519458,"y":0}]}
,{
"name": "orf00038",
"orfname": "orf00038",
"gene_start": 13359,
"gene_end": 14186,
"gene_strand": "-",
"real_start": 681376,
"real_end": 682203 ,
"real_strand": "+",
"name": "orf00038",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     65.2045260865448,
"motifs":    "PF00069",
"function":  "Serine/threonine-protein kinase PrkC OS=Staphylococcus aureus (strain Newman) OX=426430 GN=prkC PE=1 SV=1",
"annotation":"Species='-'<br>match=24.219%|Evalue=2.34e-04<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|A6QGC0|PRKC_STAAE>sp|A6QGC0|PRKC_STAAE</a>",
"protein":"MIRIKPPIRINAEDCKAKFELTAPGCQPISGTGHCFSVCCFFPYFELYFGTKKYSVGMQLKNFHHKYPVLFHLILMTLASGLILMGILFGLDIYTRHDSSIVMPELRGKDLKEAERLLSSHNLRYELVDSVYDKSLAPGVVVEMVPQSGNTVKPGRIIFLSINARSARKGIVPDLKDMSGRQALAILKGLGFEQVTERYISGDFVNLTDGVELADGRNVLAGTRLPITTPLVLRVINGYAPLPADSSLIDESITYGSSQDSASGKTEEENSESWW",
"dna":"ATGATCCGGATAAAACCGCCGATTAGGATTAACGCCGAAGACTGCAAAGCAAAATTCGAATTAACGGCTCCCGGCTGCCAACCCATTTCCGGGACAGGCCACTGTTTTTCTGTTTGCTGCTTTTTTCCGTACTTTGAACTGTATTTTGGAACAAAAAAATATTCCGTTGGCATGCAACTAAAGAATTTTCATCATAAATATCCCGTCCTCTTCCACCTAATCTTGATGACTTTGGCTTCAGGGCTTATCCTCATGGGTATCTTGTTCGGACTGGATATTTACACGAGACACGACAGCTCTATCGTAATGCCGGAGTTGCGTGGCAAAGATTTGAAGGAGGCAGAGCGTTTGCTGTCGAGCCATAATCTTCGCTACGAACTTGTCGATTCCGTTTATGACAAATCCTTGGCTCCGGGTGTCGTAGTAGAAATGGTTCCACAGAGCGGCAATACCGTCAAACCGGGGCGGATCATTTTCCTTTCGATCAATGCGAGATCGGCACGGAAGGGGATCGTCCCTGATCTGAAAGATATGTCCGGCCGCCAAGCTCTGGCCATCCTGAAAGGATTGGGCTTCGAACAAGTCACAGAGCGATACATCTCAGGCGATTTTGTCAATCTGACAGACGGAGTCGAACTGGCCGACGGCCGGAATGTACTTGCCGGTACTCGCCTGCCGATAACGACTCCGTTGGTGCTACGGGTGATCAACGGCTATGCGCCACTTCCTGCTGATTCGTCACTGATCGACGAATCGATCACCTACGGTTCATCGCAGGACAGTGCTTCGGGGAAGACCGAAGAGGAGAATAGCGAATCGTGGTGG",
"points": [{"x":63.2468516238993,"y":1},{"x":63.6468516238993,"y":2},{"x":67.1622005491904,"y":2},{"x":67.1622005491904,"y":0},{"x":63.6468516238993,"y":0}]}
,{
"name": "orf00039",
"orfname": "orf00039",
"gene_start": 14191,
"gene_end": 14328,
"gene_strand": "+",
"real_start": 681234,
"real_end": 681371 ,
"real_strand": "-",
"name": "orf00039",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     67.5101789603257,
"motifs":    "",
"function":  "",
"annotation":"",
"protein":"VDSNATICIHFGGIDAKPLLLQMNAYSLPAAEIRTKNGRIVARVF",
"dna":"GTGGATTCGAATGCGACAATCTGCATCCATTTTGGAGGCATTGATGCCAAACCATTGCTCCTACAGATGAATGCCTACAGCCTGCCGGCTGCCGAAATACGAACCAAAAACGGTCGGATTGTGGCGCGTGTTTTC",
"points": [{"x":67.1858725499479,"y":0},{"x":67.1858725499479,"y":2},{"x":67.4344853707035,"y":2},{"x":67.8344853707035,"y":1},{"x":67.4344853707035,"y":0}]}
,{
"name": "sORF_5",
"orfname": "sORF_5",
"gene_start": 14331,
"gene_end": 14429,
"gene_strand": "+",
"real_start": 681133,
"real_end": 681231 ,
"real_strand": "-",
"name": "sORF_5",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     68.0806741785816,
"motifs":    "RBS=GGCGCGTGTTTTCTGAAA<br>",
"function":  "",
"annotation":"",
"protein":"MWRENFFVLEREFFASRTKTKIFSPYVFRSVQx",
"dna":"ATGTGGCGTGAGAATTTTTTCGTTTTGGAGCGAGAATTTTTTGCTTCCCGGACCAAAACGAAAATTTTCTCGCCCTACGTTTTTCGGAGCGTACAGTAG",
"points": [{"x":67.848688571158,"y":0},{"x":67.848688571158,"y":2},{"x":67.9126597860051,"y":2},{"x":68.3126597860051,"y":1},{"x":67.9126597860051,"y":0}]}
,{
"name": "sORF_16",
"orfname": "sORF_16",
"gene_start": 14405,
"gene_end": 14506,
"gene_strand": "-",
"real_start": 681056,
"real_end": 681157 ,
"real_strand": "+",
"name": "sORF_16",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     68.4381213900199,
"motifs":    "RBS=ATCAGAATACTCTTACCG<br>",
"function":  "",
"annotation":"",
"protein":"MRLPSQVRSGWSSFFQDTSHVTPNFSYCTLRKTx",
"dna":"ATGCGGTTGCCTTCACAAGTCAGATCAGGATGGAGTAGCTTTTTTCAGGACACGTCACACGTCACACCAAACTTTTCCTACTGTACGCTCCGAAAAACGTAG",
"points": [{"x":68.1990341823691,"y":1},{"x":68.5990341823691,"y":2},{"x":68.6772085976707,"y":2},{"x":68.6772085976707,"y":0},{"x":68.5990341823691,"y":0}]}
,{
"name": "sORF_15",
"orfname": "sORF_15",
"gene_start": 14469,
"gene_end": 14591,
"gene_strand": "-",
"real_start": 680971,
"real_end": 681093 ,
"real_strand": "+",
"name": "sORF_15",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     68.7908342013067,
"motifs":    "RBS=TATTGTTGTTGTTTTTAA<br>",
"function":  "",
"annotation":"",
"protein":"LMKRYKTTENIVMVREICTRQPHQNTLTDAVAFTSQIRMEx",
"dna":"TTGATGAAGCGGTACAAAACTACAGAAAATATAGTGATGGTAAGGGAAATATGCACAAGGCAACCGCATCAGAATACTCTTACCGATGCGGTTGCCTTCACAAGTCAGATCAGGATGGAGTAG",
"points": [{"x":68.5020357920651,"y":1},{"x":68.9020357920651,"y":2},{"x":69.0796326105482,"y":2},{"x":69.0796326105482,"y":0},{"x":68.9020357920651,"y":0}]}
,{
"name": "sORF_6",
"orfname": "sORF_6",
"gene_start": 14523,
"gene_end": 14627,
"gene_strand": "+",
"real_start": 680935,
"real_end": 681039 ,
"real_strand": "-",
"name": "sORF_6",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     69.0038822081242,
"motifs":    "RBS=ATCGGTAAGAGTATTCTG<br>",
"function":  "",
"annotation":"",
"protein":"MRLPCAYFPYHHYIFCSFVPLHQLKTTTICFPESx",
"dna":"ATGCGGTTGCCTTGTGCATATTTCCCTTACCATCACTATATTTTCTGTAGTTTTGTACCGCTTCATCAATTAAAAACAACAACAATATGTTTTCCGGAATCGTAG",
"points": [{"x":68.7576934002462,"y":0},{"x":68.7576934002462,"y":2},{"x":68.8500710160023,"y":2},{"x":69.2500710160023,"y":1},{"x":68.8500710160023,"y":0}]}
,{
"name": "orf00043",
"orfname": "orf00043",
"gene_start": 14609,
"gene_end": 15211,
"gene_strand": "+",
"real_start": 680351,
"real_end": 680953 ,
"real_strand": "-",
"name": "orf00043",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     70.589906258877,
"motifs":    "",
"function":  "Riboflavin synthase OS=Actinobacillus pleuropneumoniae OX=715 GN=ribE PE=3 SV=1",
"annotation":"Species='-'<br>match=40.404%|Evalue=1.88e-42<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|P50854|RISA_ACTPL>sp|P50854|RISA_ACTPL</a>",
"protein":"MFSGIVEEYAQVTDLRHENDNLHITMTCSFVNELKIDQSIAHNGVCLTVVSKTDTTYTVTAIRETLERSNLGLLQIGDLVNLERSMMMGGRLDGHIVQGHVDQTAVCTAVEEAGGSHYYSFEYKLDKEMARQGYMTVEKGSVCVNGVSLTVCDSGMNNFRVAIIPYTRNHTNFCRIVPGSVVNLEFDIVGKYLSKMLQYQ",
"dna":"ATGTTTTCCGGAATCGTAGAAGAATATGCCCAAGTGACGGATCTCCGTCACGAAAATGACAATCTGCACATCACGATGACGTGTTCTTTCGTCAATGAACTCAAGATAGACCAAAGCATCGCACACAATGGCGTATGCCTCACCGTAGTCAGCAAGACGGACACCACCTATACCGTGACTGCCATACGCGAAACCCTCGAACGTTCCAACCTCGGACTCCTCCAAATAGGCGATCTCGTCAATCTGGAACGAAGCATGATGATGGGCGGCCGGCTCGATGGACACATCGTGCAGGGACACGTAGATCAGACGGCTGTATGTACCGCTGTGGAAGAAGCCGGCGGCAGCCACTACTATTCGTTCGAATACAAGCTCGACAAGGAGATGGCTCGCCAAGGCTATATGACCGTGGAGAAAGGATCCGTATGCGTCAATGGCGTGAGCCTGACCGTATGCGACTCCGGCATGAACAACTTCCGTGTGGCTATCATCCCCTATACTCGCAACCATACGAACTTCTGCCGCATTGTCCCGGGTAGTGTGGTCAATCTGGAATTCGACATTGTGGGGAAATATCTCAGCAAGATGCTCCAATACCAA",
"points": [{"x":69.1648518132753,"y":0},{"x":69.1648518132753,"y":2},{"x":71.6149607044787,"y":2},{"x":72.0149607044787,"y":1},{"x":71.6149607044787,"y":0}]}
,{
"name": "Cyclodehydration",
"orfname": "orf00044",
"gene_start": 15208,
"gene_end": 15759,
"gene_strand": "+",
"real_start": 679803,
"real_end": 680354 ,
"real_strand": "-",
"name": "Cyclodehydration",
"color":     "#6ba3ff",
"yline":     10,
"angle":     -60,
"xtext":     73.3050847457627,
"motifs":    "PF00881;PF00881",
"function":  "Putative NADH dehydrogenase/NAD(P)H nitroreductase AF_0226 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) OX=224325 GN=AF_0226 PE=3 SV=1",
"annotation":"Species='-'<br>match=35.028%|Evalue=3.35e-21<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|O30013|Y226_ARCFU>sp|O30013|Y226_ARCFU</a>",
"protein":"MNPNDFYSLIEQRQSDRKFDPDRPVPEDVLQRIIEAGRLSPSACNSQPWSFVVVTDPDTRRQLAEASSSRLLGMNHFTRQAPVHIVLVEEKANFTATIGGKMKKIHYANIDLGIAAAHITLAATAEGLGSCIIGWVNEAKIREILGIPSGRRVVMNIMLGYSADPHRAKKRKETSEVLHREKW",
"dna":"ATGAACCCGAACGACTTTTACTCCCTGATCGAACAGCGACAGAGCGATCGCAAGTTCGATCCCGACCGCCCCGTACCCGAAGACGTGCTTCAGCGCATCATCGAAGCGGGGCGTCTCTCCCCCTCAGCCTGCAATTCGCAGCCTTGGAGCTTTGTCGTCGTCACCGATCCCGACACTCGCAGACAACTGGCTGAAGCCTCATCGTCACGGTTATTGGGTATGAATCACTTCACGCGTCAGGCTCCCGTACACATCGTATTAGTCGAAGAGAAAGCCAACTTCACGGCGACCATCGGGGGGAAAATGAAAAAAATCCACTATGCCAATATCGACCTCGGCATAGCCGCCGCACACATCACGCTGGCAGCCACAGCCGAAGGTCTCGGCAGCTGCATCATAGGCTGGGTAAACGAAGCCAAGATCCGCGAAATACTGGGCATTCCCTCCGGACGCCGCGTAGTCATGAACATCATGCTCGGCTATTCCGCCGATCCGCACAGGGCCAAGAAGCGCAAAGAAACCTCGGAGGTTCTTCACCGCGAGAAGTGG",
"points": [{"x":72.0007575040242,"y":0},{"x":72.0007575040242,"y":2},{"x":74.2094119875012,"y":2},{"x":74.6094119875012,"y":1},{"x":74.2094119875012,"y":0}]}
,{
"name": "orf00046",
"orfname": "orf00046",
"gene_start": 15818,
"gene_end": 17032,
"gene_strand": "+",
"real_start": 678530,
"real_end": 679744 ,
"real_strand": "-",
"name": "orf00046",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     77.7625224884007,
"motifs":    "",
"function":  "Probable cysteine desulfurase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=csd PE=3 SV=1",
"annotation":"Species='-'<br>match=49.257%|Evalue=1.82e-147<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|Q9KPQ7|CSD_VIBCH>sp|Q9KPQ7|CSD_VIBCH</a>",
"protein":"MYDIQKIREDFPILHTRVHGKPLIYLDNAATTQKPIAVLDQIERAYRTFNANIHRGVHHLSQVATEQHENARKRIARYIGAEDPKEVLFTRGTTEAINLVASSFGQAFVRSGDEIIISTLEHHSNIVPWQLLAERTGARLRVIRLTESGELDVEHFRSLLNERTKIVSIAHVSNVLGTINPIRRITDLAHAAGVPVLVDGAQAIAHCRVDVRELGADFYAFSGHKVYAPTGIGVLYGKAEWLEKIPPYHGGGEMIAKVTFEKTTYNELPYKFEAGTPDYVGSTALATALDYIEELGLEAIAAHEDKLLRMATEGVRTFPNARIIGEAEHKSGVLSFLIGDIHPYDLGMLLDRLGIAIRTGHHCAEPLLESMGLNATARASFALYNTEEEVEQFLQALKRVVSMF",
"dna":"ATGTACGACATTCAAAAAATCAGGGAAGACTTCCCCATCCTCCATACCCGGGTACACGGTAAACCCCTCATCTATCTGGACAATGCCGCCACGACACAGAAACCCATAGCGGTATTAGACCAAATCGAACGAGCCTACCGCACATTCAATGCCAATATCCACCGCGGCGTACACCATCTGAGTCAGGTGGCTACGGAGCAGCACGAAAATGCTCGCAAGCGGATAGCCCGCTACATCGGAGCGGAAGACCCCAAAGAAGTGCTCTTTACGCGCGGCACCACAGAGGCAATCAATCTGGTGGCCTCTTCGTTCGGCCAAGCTTTCGTCCGCTCCGGCGATGAGATTATCATCAGTACCCTCGAACACCATTCGAATATCGTCCCATGGCAACTTTTGGCCGAACGTACCGGCGCTCGGCTCAGAGTGATCCGGTTGACCGAATCGGGCGAACTGGATGTGGAGCATTTCCGGTCTCTACTGAACGAACGTACCAAAATCGTTTCGATAGCCCACGTCAGCAATGTGCTCGGCACCATCAATCCCATACGCCGGATAACGGATTTGGCTCATGCCGCCGGAGTACCCGTTCTGGTCGATGGAGCACAGGCCATCGCCCACTGCCGGGTAGATGTTCGGGAGTTGGGAGCGGATTTCTACGCCTTCTCCGGCCATAAAGTCTACGCACCCACAGGAATAGGCGTATTGTATGGCAAAGCGGAGTGGTTGGAGAAGATCCCCCCCTACCACGGTGGCGGAGAGATGATCGCCAAGGTGACATTCGAAAAGACCACCTACAACGAATTGCCCTATAAGTTCGAAGCCGGCACGCCGGACTATGTCGGCTCCACGGCTTTGGCCACAGCTCTCGACTACATCGAAGAATTGGGCTTGGAAGCCATAGCCGCACATGAAGACAAACTCCTGCGAATGGCCACCGAAGGCGTGAGAACTTTCCCCAATGCCCGTATCATCGGAGAAGCCGAACACAAGAGCGGTGTGCTCTCTTTCCTTATAGGGGACATTCATCCCTATGACCTCGGCATGCTGCTCGATCGGCTGGGTATAGCCATCCGCACCGGACATCACTGTGCCGAACCGCTTCTCGAAAGCATGGGACTCAATGCCACGGCTCGCGCCTCCTTTGCCCTCTACAACACCGAGGAGGAAGTGGAACAATTCCTCCAAGCCTTGAAACGTGTAGTAAGCATGTTC",
"points": [{"x":74.8887415964397,"y":0},{"x":74.8887415964397,"y":2},{"x":80.2363033803617,"y":2},{"x":80.6363033803617,"y":1},{"x":80.2363033803617,"y":0}]}
,{
"name": "orf00047",
"orfname": "orf00047",
"gene_start": 17043,
"gene_end": 17648,
"gene_strand": "+",
"real_start": 677914,
"real_end": 678519 ,
"real_strand": "-",
"name": "orf00047",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     82.1205378278572,
"motifs":    "",
"function":  "Ribonuclease HII OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / CIP 103683 / JCM 12257 / NCTC 11834 / 2561) OX=431947 GN=rnhB PE=3 SV=1",
"annotation":"Species='-'<br>match=99.502%|Evalue=5.89e-149<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|B2RIU1|RNH2_PORG3>sp|B2RIU1|RNH2_PORG3</a>",
"protein":"MLLSRYIDDDLRECGCDEAGRGCLAGPVYAAAVILPADFSHPLLNDSKQLSEKQRYTLRPVIESEAIAWGIGIVSPQEIDEINILRASFLAMHRAIEQLPFRPERLLIDGNRFDPFEQIPHHCIVGGDARYRSIAAASILAKTYRDDSMLRLNKDFPMYGWERNKGYPSPAHKSAIRRFGVSPHHRLTFRGVVDADRPTTE",
"dna":"ATGCTGCTCTCTCGCTACATAGACGATGACTTGCGTGAATGCGGTTGCGACGAAGCCGGTCGCGGCTGTCTGGCCGGTCCTGTCTATGCAGCGGCTGTGATCCTACCGGCCGACTTCTCTCATCCCCTGCTGAATGATTCGAAACAACTGAGCGAAAAGCAACGCTATACCCTTCGCCCCGTCATAGAATCCGAGGCTATCGCATGGGGGATAGGCATCGTGAGTCCGCAGGAGATAGACGAGATCAATATCCTCAGAGCTTCCTTTCTTGCGATGCATCGCGCCATAGAGCAGTTACCTTTTCGCCCCGAAAGATTGCTGATCGACGGCAATCGGTTCGATCCTTTCGAACAAATCCCTCACCACTGTATCGTGGGAGGCGATGCCCGCTATCGCTCCATCGCAGCAGCTTCCATTTTGGCCAAAACCTATCGGGACGACTCGATGCTCCGTCTGAATAAGGACTTCCCGATGTACGGATGGGAGCGCAACAAAGGTTATCCGTCACCTGCACACAAATCCGCTATTCGTCGTTTCGGAGTTTCGCCACATCACCGTCTTACTTTCCGTGGAGTGGTGGATGCAGACCGGCCGACAACAGAA",
"points": [{"x":80.6883817820282,"y":0},{"x":80.6883817820282,"y":2},{"x":83.1526938736862,"y":2},{"x":83.5526938736862,"y":1},{"x":83.1526938736862,"y":0}]}
,{
"name": "orf00048",
"orfname": "orf00048",
"gene_start": 17716,
"gene_end": 17901,
"gene_strand": "+",
"real_start": 677661,
"real_end": 677846 ,
"real_strand": "-",
"name": "orf00048",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     84.3125650980021,
"motifs":    "",
"function":  "",
"annotation":"",
"protein":"MLRKKAIQIRLNEAEHKAVETYCSRFKVENRSRWIRETLMKEVIHRLESDTPLLFREEEMR",
"dna":"ATGCTCCGAAAGAAAGCCATTCAGATCCGACTGAACGAAGCGGAGCACAAGGCCGTCGAGACCTATTGCAGCCGCTTCAAAGTAGAGAACCGCTCCCGTTGGATCCGAGAAACGCTGATGAAAGAAGTGATACACCGGTTAGAAAGCGACACTCCCTTGCTTTTTCGAGAGGAGGAAATGCGA",
"points": [{"x":83.8746330839883,"y":0},{"x":83.8746330839883,"y":2},{"x":84.3504971120159,"y":2},{"x":84.7504971120159,"y":1},{"x":84.3504971120159,"y":0}]}
,{
"name": "orf00051",
"orfname": "orf00051",
"gene_start": 17898,
"gene_end": 18350,
"gene_strand": "+",
"real_start": 677212,
"real_end": 677664 ,
"real_strand": "-",
"name": "orf00051",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     85.8062683458006,
"motifs":    "",
"function":  "tRNA-specific adenosine deaminase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=tadA PE=1 SV=1",
"annotation":"Species='-'<br>match=45.946%|Evalue=2.90e-40<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|Q99W51|TADA_STAAM>sp|Q99W51|TADA_STAAM</a>",
"protein":"MTAPTFATDDIRYMRIALEEARAAADEGEVPIGAVIVCKGQIVARAHNRVERLNDPTAHAEMLAITMAVDAIGGKYLRDCTLYVTVEPCLMCAGALRWTQIPRVVYGASEPKVGYRLFTDHALHPKCHVEGGILADESENLMRSFFAERR",
"dna":"ATGACAGCCCCTACCTTTGCCACGGATGACATCCGCTACATGAGGATTGCGCTCGAAGAGGCACGAGCGGCTGCTGACGAAGGAGAGGTTCCTATCGGAGCCGTGATCGTCTGCAAAGGGCAGATCGTTGCGCGTGCTCACAACAGAGTGGAAAGGCTAAACGACCCTACGGCTCATGCCGAGATGCTTGCCATCACGATGGCCGTAGACGCCATAGGGGGGAAATACCTCCGCGACTGCACGCTGTACGTGACTGTCGAACCCTGCCTGATGTGTGCTGGCGCACTTCGCTGGACACAAATACCGCGAGTAGTGTACGGAGCATCCGAACCCAAAGTGGGCTACAGGCTGTTCACCGATCATGCACTCCATCCCAAATGCCACGTAGAAGGCGGTATATTGGCGGACGAATCGGAGAATCTGATGCGTAGTTTCTTTGCCGAACGGCGG",
"points": [{"x":84.7362939115614,"y":0},{"x":84.7362939115614,"y":2},{"x":86.4762427800398,"y":2},{"x":86.8762427800398,"y":1},{"x":86.4762427800398,"y":0}]}
,{
"name": "orf00053",
"orfname": "orf00053",
"gene_start": 18382,
"gene_end": 19296,
"gene_strand": "+",
"real_start": 676266,
"real_end": 677180 ,
"real_strand": "-",
"name": "orf00053",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     89.1913644541237,
"motifs":    "",
"function":  "Ribonuclease Z OS=Porphyromonas gingivalis (strain ATCC BAA-308 / W83) OX=242619 GN=rnz PE=3 SV=2",
"annotation":"Species='-'<br>match=100.000%|Evalue=0.0<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|Q51834|RNZ_PORGI>sp|Q51834|RNZ_PORGI</a>",
"protein":"MAAFSVHILGCGSALPTTHHHPSSQVIDLRDKLYMIDCGEGVQRQFRHEKLHFGRLIHIFISHLHGDHCFGLPGFISTLGLLGRTGTLHVHGPEGIERFLSPILEQFCHRMPYQVEIHTIDASRHALVHEDKSVKVYSIPLSHRIPAVGYLFEEKCRARHLNKAAAEFYNIPLAEYPLIIEGSDYTTPDGRIIPNRHLTTPGTPPRRYAYCSDTEFCPSIVPIIQGVDLLYHEATFMEEDRARAKETFHSTAKEAAEIARQAGAKRLLIGHYSGRYKDVQGLLEEAQSVFKPTIAANERMRIDL",
"dna":"ATGGCAGCATTCAGTGTACATATATTGGGCTGCGGATCTGCCCTGCCAACCACACACCACCATCCCTCTTCGCAAGTAATCGACCTGCGCGACAAACTCTACATGATCGATTGCGGAGAAGGTGTCCAGCGACAATTCAGACACGAAAAGCTCCATTTCGGACGTCTCATTCATATCTTCATCAGCCATCTCCATGGCGATCACTGTTTCGGTCTGCCCGGATTTATCTCCACGCTCGGTCTGCTGGGGCGTACCGGCACCCTGCATGTACATGGGCCGGAGGGAATAGAGCGTTTCCTCAGCCCCATATTGGAGCAGTTCTGTCACCGAATGCCCTATCAGGTGGAGATACATACGATCGATGCCTCCCGACATGCGCTTGTACATGAGGACAAATCCGTCAAAGTCTATAGCATACCGCTCAGTCACCGCATCCCTGCGGTGGGCTACCTCTTCGAAGAGAAATGCCGTGCAAGGCATCTGAACAAAGCGGCTGCCGAGTTCTACAATATTCCACTTGCCGAATATCCTCTCATCATAGAAGGATCCGATTACACGACACCGGATGGGCGGATCATCCCCAACCGACACCTCACGACCCCGGGTACACCACCCAGACGATATGCTTACTGCTCGGACACGGAGTTTTGTCCCTCCATCGTCCCTATTATTCAAGGTGTGGATTTGCTTTACCATGAAGCTACTTTTATGGAGGAGGATCGGGCAAGAGCCAAAGAGACTTTTCACAGTACAGCCAAAGAAGCCGCCGAAATAGCACGACAGGCAGGAGCAAAACGCCTCCTCATCGGGCATTACTCCGGCAGATACAAGGACGTCCAAGGTTTGCTGGAAGAAGCTCAAAGCGTATTCAAGCCAACTATTGCCGCCAATGAAAGAATGCGCATCGATCTG",
"points": [{"x":87.0277435848878,"y":0},{"x":87.0277435848878,"y":2},{"x":90.9549853233595,"y":2},{"x":91.3549853233595,"y":1},{"x":90.9549853233595,"y":0}]}
,{
"name": "orf00055",
"orfname": "orf00055",
"gene_start": 19319,
"gene_end": 19840,
"gene_strand": "+",
"real_start": 675722,
"real_end": 676243 ,
"real_strand": "-",
"name": "orf00055",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     92.69718776631,
"motifs":    "",
"function":  "Gamma-DL-glutamyl hydrolase OS=Bacillus subtilis (strain 168) OX=224308 GN=pgdS PE=1 SV=2",
"annotation":"Species='-'<br>match=34.848%|Evalue=2.09e-14<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|P96740|PGDS_BACSU>sp|P96740|PGDS_BACSU</a>",
"protein":"LLLTLAGLLYSCGTGKKATNISGKPHHTTTTGHSLRTAEDIVTDLIARGKKLIGKPYRYQGPSSWPMDCSGYVAYLYSCYDIHIPRSSSALYNYTIPIRHPLPGDLLFFRGSKNHKGTIGHVALLIEVCDDELIMLHNTNSRGIIIESLQRSSYFSKRYIRAGRLPEIQALMD",
"dna":"TTGCTCCTTACCCTTGCTGGCCTCCTGTATTCCTGCGGAACAGGCAAAAAAGCGACAAATATATCCGGCAAACCTCACCATACAACTACTACCGGCCATTCGCTCCGAACGGCGGAGGACATCGTTACCGACCTGATAGCCCGAGGCAAGAAACTGATAGGCAAACCCTACAGGTATCAGGGGCCATCGTCTTGGCCGATGGATTGCTCCGGCTACGTGGCCTACCTCTATTCCTGCTACGATATTCATATTCCACGCTCTTCATCGGCACTGTACAACTATACCATTCCCATACGCCATCCTCTACCGGGCGATCTGCTTTTCTTCCGTGGTAGCAAGAATCACAAAGGGACTATCGGCCATGTGGCACTGTTGATCGAAGTTTGCGATGACGAACTAATCATGCTACACAACACCAATAGCAGAGGTATTATCATCGAATCACTGCAACGAAGTTCGTACTTCAGCAAGCGTTACATCCGTGCCGGTCGTTTGCCTGAGATCCAAGCTCTCATGGAC",
"points": [{"x":91.463876526844,"y":0},{"x":91.463876526844,"y":2},{"x":93.530499005776,"y":2},{"x":93.930499005776,"y":1},{"x":93.530499005776,"y":0}]}
,{
"name": "sORF_14",
"orfname": "sORF_14",
"gene_start": 19994,
"gene_end": 20125,
"gene_strand": "-",
"real_start": 675437,
"real_end": 675568 ,
"real_strand": "+",
"name": "sORF_14",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     94.9696998390304,
"motifs":    "RBS=TTTGTAAGGACGACCTAT<br>",
"function":  "",
"annotation":"",
"protein":"LLRKVDLNAWLGRPDFLSVSTYAVYSLVVCGREGGYELENNPLx",
"dna":"TTGCTCCGTAAGGTCGACCTAAACGCTTGGTTAGGTCGACCTGACTTTCTGTCAGTGTCGACGTATGCGGTTTATTCCCTCGTAGTGTGCGGACGAGAAGGGGGCTACGAACTGGAAAACAACCCTTTATAA",
"points": [{"x":94.6595966291071,"y":1},{"x":95.0595966291071,"y":2},{"x":95.2798030489537,"y":2},{"x":95.2798030489537,"y":0},{"x":95.0595966291071,"y":0}]}
,{
"name": "sORF_7",
"orfname": "sORF_7",
"gene_start": 20203,
"gene_end": 20316,
"gene_strand": "+",
"real_start": 675246,
"real_end": 675359 ,
"real_strand": "-",
"name": "sORF_7",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     95.9165798693306,
"motifs":    "RBS=CGGAGCGGTACGTCGTCC<br>",
"function":  "",
"annotation":"",
"protein":"LLNERNAIGVSPFPVNETFARQLPCKGPGQPHQNVSAx",
"dna":"TTGCTAAACGAGAGAAATGCGATCGGCGTTTCTCCGTTTCCTGTTAATGAGACCTTTGCACGGCAATTGCCGTGCAAAGGTCCAGGGCAACCGCATCAAAATGTAAGTGCCTGA",
"points": [{"x":95.6490862607708,"y":0},{"x":95.6490862607708,"y":2},{"x":95.7840734778903,"y":2},{"x":96.1840734778904,"y":1},{"x":95.7840734778903,"y":0}]}
,{
"name": "sORF_13",
"orfname": "sORF_13",
"gene_start": 20206,
"gene_end": 20301,
"gene_strand": "-",
"real_start": 675261,
"real_end": 675356 ,
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,{
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,{
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,{
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,{
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,{
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"protein":"LCINCLQSMRPFRVTPLLIGLSVGLHRLWEx",
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,{
"name": "orf00062",
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"function":  "tRNA (guanosine(18)-2'-O)-methyltransferase OS=Aquifex aeolicus (strain VF5) OX=224324 GN=trmH PE=1 SV=1",
"annotation":"Species='-'<br>match=34.426%|Evalue=4.09e-07<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|O67577|TRMH_AQUAE>sp|O67577|TRMH_AQUAE</a>",
"protein":"LPNFTEPAILVLGSEGHGISPEVAAEITDRLTIPASGLSVKGHTESLNVAIAAAILCSEWRRRS",
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]}
