{
"AOIs": [ 
{
"name": "NZ_CP0245911.2405.AOI_01",
"filename": "/data/pg-molgen/USERS/Vicky/Genomes_Bacteroidales/Porphyromonadaceae/Porphyromonas_gingivalis/GCF_000007585.1_ASM758v1_genomic.fna",
"color": "gray",
"yline": 10,
"xstart": 5,
"points": [ {"x":0,"y":10}, {"x":800,"y":10} ]
}
],
"Genes": [
{
"name": "orf00005",
"orfname": "orf00005",
"gene_start": 736,
"gene_end": 2418,
"gene_strand": "-",
"real_start": 2279318,
"real_end": 2281000 ,
"real_strand": "+",
"name": "orf00005",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     7.46933169137498,
"motifs":    "",
"function":  "",
"annotation":"",
"protein":"MVLFAGLFAACNKEDNDLINSTSDEAATLATMYPNAQNVRWEQEGEFRVAEFMNEGVKSEAWFLRSIWQYTEIDIPYSALPKAVRAAFEASEYAKWKIEDIDKVERNGTEVFYVIEVEKGDQEVDLYYMPNGKLIKTVKEPHNGSAGQYANPVIPAGVMNTIKAYIASNYPNATILEYEIEDGYIEVDILDGTVHRVLIFTLQGEWVNSHVDDGDDDYDYDDDAYENNIPANIKALIISYVNQNYPGAVIHSIERNSNGTYDVEIYYNNREYDLLFDAQGNFISGNVDDQDDDDNIPAHIKAKIINYVNRNYPGAFIKDIERKSNGTYKAEIVYNNKEYDLLFDAQGNFISGNVDDQDDDDNIPAHIKAKIINYINRNYPGAFIKDIERKSNGTYKAEIVYNNKEYDLLFDAQGNFISGNVDNQDDDDNIPAHIKAKIINYINRNYPGAFIKDIERKSNGTYKAEIVYNNTEYDLLFNAQGNFVSAHIDGYEDDDDNIPAHIKAKIINYVNRNYPGAIIKDIERKSNGRYEAEIVYNNREYDLLFDAQGNFISASLDDKK",
"dna":"ATGGTGCTGTTTGCAGGCTTATTTGCTGCATGTAACAAGGAAGACAACGATCTCATCAATTCGACTTCGGATGAAGCGGCAACTTTGGCTACGATGTATCCCAATGCTCAGAATGTAAGATGGGAGCAAGAAGGTGAATTCCGTGTGGCAGAATTCATGAACGAAGGCGTTAAGTCTGAAGCATGGTTCTTGCGAAGCATCTGGCAATACACGGAGATAGACATTCCCTACAGCGCCCTGCCTAAAGCAGTCCGAGCTGCTTTTGAGGCAAGTGAATATGCCAAGTGGAAAATAGAAGACATAGATAAGGTAGAGCGTAACGGTACCGAAGTATTCTATGTCATAGAAGTAGAAAAGGGAGACCAGGAAGTCGACTTGTACTACATGCCCAATGGCAAGCTGATCAAAACCGTGAAAGAACCTCACAACGGATCAGCAGGTCAATATGCCAATCCGGTGATTCCGGCAGGAGTAATGAATACCATCAAGGCTTACATCGCTTCCAACTATCCTAATGCAACTATTCTGGAGTACGAGATCGAAGATGGCTACATAGAGGTGGACATTTTGGATGGTACGGTACATCGAGTTCTTATTTTCACACTCCAAGGCGAGTGGGTAAATAGTCATGTGGATGATGGAGATGACGATTATGACTACGATGATGATGCATACGAAAACAACATTCCGGCCAACATCAAGGCTCTGATCATCAGCTATGTCAATCAGAATTACCCGGGAGCTGTCATTCACAGTATCGAGCGTAACTCCAATGGTACTTATGACGTAGAAATTTACTACAACAATAGGGAGTATGATTTGCTGTTCGATGCACAAGGCAACTTCATCAGCGGAAATGTAGACGATCAGGATGATGACGACAATATCCCAGCTCACATCAAGGCTAAGATCATCAATTACGTCAACCGGAACTACCCCGGTGCCTTTATCAAGGACATCGAAAGAAAGTCCAACGGCACATACAAGGCGGAAATCGTGTACAACAACAAGGAGTATGATTTGCTGTTCGATGCACAGGGCAACTTCATCAGCGGAAACGTAGACGATCAGGATGATGATGACAATATCCCTGCTCACATCAAGGCTAAGATCATCAATTACATCAACCGGAACTACCCCGGTGCCTTTATCAAGGACATCGAAAGAAAGTCCAACGGCACATACAAGGCGGAAATCGTGTACAACAACAAGGAGTATGATTTGCTGTTCGATGCACAGGGCAACTTCATCAGCGGAAACGTAGACAATCAGGATGATGATGACAATATCCCAGCTCACATCAAGGCCAAAATCATCAATTACATCAACCGGAACTACCCCGGTGCCTTTATCAAGGACATCGAAAGAAAGTCCAACGGCACATACAAGGCAGAAATCGTCTACAACAATACTGAGTACGACCTGCTGTTCAATGCACAGGGCAACTTTGTAAGCGCACACATCGATGGCTATGAGGATGATGACGACAACATTCCTGCTCACATCAAGGCTAAAATCATCAATTACGTCAACCGGAACTACCCCGGTGCCATTATTAAGGACATCGAAAGAAAATCCAATGGCAGATACGAGGCAGAGATTGTCTACAACAACAGGGAGTATGACCTGCTGTTCGATGCACAAGGCAATTTCATCAGTGCGAGCCTGGATGACAAAAAA",
"points": [{"x":3.48600388386302,"y":1},{"x":3.88600388386302,"y":2},{"x":11.4526594988869,"y":2},{"x":11.4526594988869,"y":0},{"x":3.88600388386302,"y":0}]}
,{
"name": "orf00008",
"orfname": "orf00008",
"gene_start": 2487,
"gene_end": 2924,
"gene_strand": "-",
"real_start": 2278812,
"real_end": 2279249 ,
"real_strand": "+",
"name": "orf00008",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     12.8143797660209,
"motifs":    "",
"function":  "",
"annotation":"",
"protein":"MKRLKIFLLIIVLAGIKGWAAGDRIIPLNRIPQKAQAVVAKHFAGAKVSYVKMDDDLFSKTYDVVFTNGNKIEFDKKGNWKEIDCKYSRVPSDLVPAPILRHISSQYPDLYIVQIDRDSRDYEVELNNGLELVFSLKGVFKRFHD",
"dna":"ATGAAAAGACTGAAAATTTTTCTCTTGATAATTGTACTGGCCGGGATAAAGGGATGGGCGGCCGGCGATCGTATCATCCCCCTCAATCGCATCCCCCAAAAGGCTCAGGCAGTCGTGGCAAAACACTTTGCAGGTGCTAAGGTATCATACGTAAAGATGGACGACGACTTGTTCAGCAAGACCTATGATGTTGTCTTTACCAATGGCAACAAAATCGAATTCGACAAAAAAGGAAATTGGAAAGAAATAGATTGCAAGTACTCGCGCGTACCCAGCGACTTGGTCCCTGCCCCGATATTGCGTCACATATCATCTCAGTATCCCGACCTCTATATCGTTCAAATCGATCGGGATAGTAGAGACTATGAAGTGGAACTGAACAACGGCTTGGAACTCGTATTCTCTCTCAAAGGAGTTTTCAAGCGGTTTCATGAT",
"points": [{"x":11.7794723629991,"y":1},{"x":12.1794723629991,"y":2},{"x":13.8492871690428,"y":2},{"x":13.8492871690428,"y":0},{"x":12.1794723629991,"y":0}]}
,{
"name": "LanK",
"orfname": "orf00009",
"gene_start": 3047,
"gene_end": 4264,
"gene_strand": "-",
"real_start": 2277472,
"real_end": 2278689 ,
"real_strand": "+",
"name": "LanK",
"color":     "#fff651",
"yline":     10,
"angle":     -60,
"xtext":     17.3139771704637,
"motifs":    "PF02518;PF00512",
"function":  "Sensor protein QseC OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=qseC PE=1 SV=1",
"annotation":"Species='-'<br>match=28.852%|Evalue=6.72e-16<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|P45336|QSEC_HAEIN>sp|P45336|QSEC_HAEIN</a>",
"protein":"VIAFYYVIVEEINDETNDSLENYSEHVIRNILSDNPLPPAENDLNNTYSIREITPQEAMRFAHDIYYYEMVYVKARREMEPCRTMHTVFGDGNGRYYELKVSMPTIEKRDLRETLLEFIIYLYILLLIVTIGVTTWIISRSFRPLYRLIGWIDRFRVNEPVQELVMAKTDVTEFRKLSEAMLRTAHHNVEVFEQQKEFISHASHELQTPLAISRNKLEMLLQDPSLNEQQLEQIYKAIQSINHIVQLNKTLLLYSKIENHQFPEEESIDVNELLHNLAEEYEAIFANRRIRIVWSRSEPMVLSMNPTLAKVLLSNLLKNAYLHNLERDGEIHIDLTSMHCSIANTGVKNALDETLIFERFYHDMKQAHSSGLGLPIARSICQLYGLRLTYRFENGKHTFSIGKEV",
"dna":"GTGATAGCTTTCTATTATGTAATCGTCGAAGAAATAAACGACGAGACGAACGATTCGTTGGAGAACTACTCCGAACATGTCATCCGCAATATCCTCTCCGACAATCCTCTTCCACCGGCTGAAAACGACCTTAACAACACTTACTCCATTCGGGAGATTACCCCACAGGAGGCTATGCGTTTCGCTCACGATATTTACTATTATGAGATGGTGTACGTGAAGGCTCGTCGCGAAATGGAGCCCTGCCGGACGATGCATACGGTATTCGGCGACGGCAATGGCAGATACTATGAGCTCAAAGTTTCCATGCCGACCATCGAAAAGAGAGATTTGCGCGAAACGCTGTTAGAGTTTATCATTTATCTCTATATCCTGCTTCTGATCGTTACCATCGGCGTCACCACGTGGATCATATCGCGTAGTTTCCGGCCACTGTATCGACTGATCGGCTGGATAGATCGCTTCCGCGTAAACGAACCTGTACAAGAGTTGGTAATGGCTAAAACGGATGTGACGGAATTCCGCAAGCTCAGTGAGGCCATGCTGCGTACTGCTCACCATAACGTGGAGGTTTTCGAGCAGCAGAAAGAATTTATCTCGCATGCCTCACACGAACTGCAAACACCTCTGGCCATAAGCCGCAATAAACTGGAAATGCTACTGCAAGATCCCTCTTTGAATGAACAGCAGCTCGAACAGATTTATAAGGCTATACAGTCCATCAACCATATTGTACAGCTCAATAAAACCCTCCTCCTTTATAGCAAAATCGAAAACCATCAATTCCCTGAGGAGGAAAGCATAGATGTGAATGAGCTATTGCACAATTTGGCGGAGGAGTATGAAGCGATTTTCGCCAATCGACGTATTCGCATTGTATGGAGCAGAAGTGAACCAATGGTTCTATCAATGAACCCGACTTTGGCCAAAGTCTTGCTAAGCAACCTGCTTAAGAACGCATACTTGCACAATCTTGAAAGAGATGGAGAGATCCATATCGATCTCACCTCTATGCATTGCAGCATAGCGAATACGGGGGTGAAGAACGCTTTGGACGAGACCTTGATATTCGAACGTTTCTATCACGATATGAAACAGGCTCATTCTTCCGGCTTGGGGCTTCCCATTGCACGCTCTATATGCCAGCTGTACGGACTCCGACTGACTTATCGCTTCGAGAATGGGAAACACACTTTTTCCATCGGCAAGGAAGTA",
"points": [{"x":14.4318666224601,"y":1},{"x":14.8318666224601,"y":2},{"x":20.1960877184673,"y":2},{"x":20.1960877184673,"y":0},{"x":14.8318666224601,"y":0}]}
,{
"name": "LanR",
"orfname": "orf00010",
"gene_start": 4327,
"gene_end": 5016,
"gene_strand": "-",
"real_start": 2276720,
"real_end": 2277409 ,
"real_strand": "+",
"name": "LanR",
"color":     "#fff651",
"yline":     10,
"angle":     -60,
"xtext":     22.1261781840572,
"motifs":    "PF00072;PF00486",
"function":  "Transcriptional regulatory protein DltR OS=Streptococcus agalactiae serotype V (strain ATCC BAA-611 / 2603 V/R) OX=208435 GN=dltR PE=3 SV=1",
"annotation":"Species='-'<br>match=38.326%|Evalue=2.08e-41<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|P0A4I0|DLTR_STRA5>sp|P0A4I0|DLTR_STRA5</a>",
"protein":"MKILIIEDEPDLRETIQKFLLGERYIVETAATMNEGLDKVLVYDYDRILLDIMLPDGNGLTLLKELKKRGKTENLIIISAKDAIEDKVQGIELGADDYLTKPFHLLELNARIKGLIRRKTAHGAMEIKLGNVSLVPDRFEVAVKGHPLELKRKEYDILYHLMTRPNRLVDKAALTEAVWGDYIDQADNYDFVYAQIKNLRKQMNDAGATIEIKSLYGFGYKLIEREEDT",
"dna":"ATGAAAATCCTCATTATCGAAGATGAACCGGATCTGAGGGAAACCATCCAAAAGTTTCTCCTCGGGGAAAGGTATATCGTAGAGACAGCTGCAACGATGAACGAAGGCTTGGACAAGGTGCTGGTGTACGACTACGACCGTATCCTGCTGGACATTATGCTGCCCGACGGCAATGGGCTTACCCTTTTGAAGGAACTGAAAAAGAGAGGAAAAACAGAGAACCTGATCATCATCTCTGCCAAAGACGCGATCGAGGACAAGGTGCAGGGGATCGAACTGGGTGCGGATGATTATCTGACAAAGCCATTCCATCTCCTGGAATTGAACGCCAGAATCAAAGGACTTATCCGACGCAAAACGGCTCATGGAGCCATGGAAATCAAACTCGGAAATGTGTCTTTGGTACCGGACAGGTTCGAAGTTGCGGTCAAAGGGCATCCCTTGGAGTTGAAGCGAAAAGAATACGATATCCTGTATCACCTGATGACCCGACCGAACCGATTGGTGGACAAGGCCGCTCTGACAGAAGCCGTGTGGGGAGACTATATAGACCAAGCGGACAATTATGACTTTGTCTATGCTCAAATCAAAAATCTGCGCAAGCAGATGAACGATGCAGGGGCGACGATCGAGATCAAATCGCTATATGGATTCGGTTATAAACTCATAGAAAGAGAAGAAGATACT",
"points": [{"x":20.4944820726567,"y":1},{"x":20.8944820726567,"y":2},{"x":23.7578742954578,"y":2},{"x":23.7578742954578,"y":0},{"x":20.8944820726567,"y":0}]}
,{
"name": "sORF_1",
"orfname": "sORF_1",
"gene_start": 5090,
"gene_end": 5245,
"gene_strand": "+",
"real_start": 2276491,
"real_end": 2276646 ,
"real_strand": "-",
"name": "sORF_1",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     24.4754416710084,
"motifs":    "RBS=AATTTTTCCTGAAATAGC<br>",
"function":  "",
"annotation":"",
"protein":"MLSLCSPGMCGYFTPVFWGRGANSVTLFYIFVPRRFARISANEVFQSLKNRx",
"dna":"ATGCTCTCCCTTTGCAGTCCCGGGATGTGCGGATATTTTACGCCTGTGTTTTGGGGACGAGGTGCAAATTCGGTGACACTTTTTTATATCTTTGTCCCAAGACGATTTGCTCGAATCTCAGCAAACGAAGTCTTTCAATCACTTAAAAACAGATAG",
"points": [{"x":24.1083692511723,"y":0},{"x":24.1083692511723,"y":2},{"x":24.4425140908445,"y":2},{"x":24.8425140908445,"y":1},{"x":24.4425140908445,"y":0}]}
,{
"name": "sORF_19",
"orfname": "sORF_19",
"gene_start": 5127,
"gene_end": 5231,
"gene_strand": "-",
"real_start": 2276505,
"real_end": 2276609 ,
"real_strand": "+",
"name": "sORF_19",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     24.5299104816937,
"motifs":    "RBS=ATAACTATCTGTTTTTAA<br>",
"function":  "",
"annotation":"",
"protein":"VIERLRLLRFEQIVLGQRYKKVSPNLHLVPKTQAx",
"dna":"GTGATTGAAAGACTTCGTTTGCTGAGATTCGAGCAAATCGTCTTGGGACAAAGATATAAAAAAGTGTCACCGAATTTGCACCTCGTCCCCAAAACACAGGCGTAA",
"points": [{"x":24.2836167290295,"y":1},{"x":24.6836167290295,"y":2},{"x":24.776204234358,"y":2},{"x":24.776204234358,"y":0},{"x":24.6836167290295,"y":0}]}
,{
"name": "orf00016",
"orfname": "orf00016",
"gene_start": 5248,
"gene_end": 5856,
"gene_strand": "+",
"real_start": 2275880,
"real_end": 2276488 ,
"real_strand": "-",
"name": "orf00016",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     26.2965945152276,
"motifs":    "",
"function":  "Gamma-D-glutamyl-L-lysine dipeptidyl-peptidase OS=Bacillus cereus (strain ATCC 10987 / NRS 248) OX=222523 GN=ykfC PE=1 SV=1",
"annotation":"Species='-'<br>match=33.577%|Evalue=5.58e-16<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|Q736M3|YKFC_BACC1>sp|Q736M3|YKFC_BACC1</a>",
"protein":"MTVKRAVRIALLTLISILFSSPSLVRAQSLFSTEHVLQLYNKILYGESAADTIAEKTAGESAFPFIDKLINLGRTFLGKPYRYRGPSPWPMDCSGYVSYLYSKFDIKLPRGAAAQSQYTNPIEREDVRPGDLLFFKGRNARSNRIGHVALVVSVDEDDITMMHSRNSRGIVIEKLNRSAYFSRRLVSYGRVPGAKRVIPRKS",
"dna":"ATGACAGTAAAGCGCGCAGTGCGAATAGCACTTCTCACGCTGATAAGCATTCTTTTTTCCTCACCTTCTCTTGTTCGGGCGCAAAGTCTTTTCAGCACCGAACATGTCTTGCAACTATACAACAAGATACTCTATGGAGAGTCAGCGGCGGATACCATCGCAGAGAAAACGGCAGGTGAGTCGGCATTTCCTTTTATAGACAAACTCATCAATCTCGGCCGCACTTTCCTCGGCAAACCATATCGCTATCGCGGTCCTTCCCCATGGCCGATGGACTGCTCGGGCTATGTGTCTTACCTCTACTCCAAATTCGACATCAAACTCCCACGTGGTGCGGCAGCACAGAGCCAATATACGAATCCTATCGAGCGCGAGGACGTTCGTCCGGGCGACCTCCTTTTTTTCAAAGGCCGCAATGCACGCAGCAACCGTATCGGGCATGTAGCTTTGGTCGTATCTGTCGATGAAGATGATATTACCATGATGCACAGCCGCAATTCGCGAGGGATCGTGATCGAAAAACTCAATCGCAGTGCATACTTCTCCCGTCGCTTGGTGAGCTATGGCAGGGTACCCGGAGCCAAGAGAGTGATCCCACGAAAAAGT",
"points": [{"x":24.8567233458059,"y":0},{"x":24.8567233458059,"y":2},{"x":27.3364656846493,"y":2},{"x":27.7364656846493,"y":1},{"x":27.3364656846493,"y":0}]}
,{
"name": "orf00017",
"orfname": "orf00017",
"gene_start": 5903,
"gene_end": 6061,
"gene_strand": "+",
"real_start": 2275675,
"real_end": 2275833 ,
"real_strand": "-",
"name": "orf00017",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     28.333254393028,
"motifs":    "",
"function":  "",
"annotation":"",
"protein":"VQQSPDLCTALFAYSPDGFGRRKYCEVAKEREKKTIHISELIFPAGKSFPDS",
"dna":"GTGCAGCAATCACCGGATTTGTGCACAGCCCTTTTCGCATACAGCCCGGATGGATTTGGAAGGAGAAAGTATTGTGAGGTGGCCAAAGAGAGAGAGAAAAAAACGATACATATTTCGGAACTTATTTTTCCGGCCGGGAAAAGTTTCCCCGACAGC",
"points": [{"x":27.9590773457112,"y":0},{"x":27.9590773457112,"y":2},{"x":28.3074314403448,"y":2},{"x":28.7074314403448,"y":1},{"x":28.3074314403448,"y":0}]}
,{
"name": "orf00021",
"orfname": "orf00021",
"gene_start": 6091,
"gene_end": 6243,
"gene_strand": "-",
"real_start": 2275493,
"real_end": 2275645 ,
"real_strand": "+",
"name": "orf00021",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     29.2094917823142,
"motifs":    "",
"function":  "",
"annotation":"",
"protein":"MIVLGRKKFFLQYRKVEKLYCNSLFKGFGYINEAFVYVSKGFVYISEGFG",
"dna":"ATGATCGTTCTCGGCCGGAAAAAGTTTTTTCTGCAGTACAGAAAAGTTGAAAAGCTATACTGCAATTCTTTATTCAAAGGTTTCGGATATATAAACGAAGCTTTCGTATATGTATCCAAAGGCTTCGTTTATATATCCGAAGGCTTTGGA",
"points": [{"x":28.8495239899588,"y":1},{"x":29.2495239899588,"y":2},{"x":29.5694595746696,"y":2},{"x":29.5694595746696,"y":0},{"x":29.2495239899588,"y":0}]}
,{
"name": "sORF_18",
"orfname": "sORF_18",
"gene_start": 6249,
"gene_end": 6416,
"gene_strand": "-",
"real_start": 2275320,
"real_end": 2275487 ,
"real_strand": "+",
"name": "sORF_18",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     29.9933690143513,
"motifs":    "RBS=TCTATAGGAGAACAAGGT<br>",
"function":  "",
"annotation":"",
"protein":"LSDKSVPPLNESIDAIAIGATSKTQYAIASGIRISYINPFITVRFEEYSFFTGQQx",
"dna":"TTGTCGGATAAAAGTGTACCGCCCCTGAATGAAAGCATCGATGCAATCGCTATCGGTGCGACAAGCAAGACTCAATATGCTATTGCTTCCGGGATACGAATATCTTACATAAATCCCTTCATTACAGTACGTTTTGAAGAATATTCATTTTTTACCGGACAGCAATAA",
"points": [{"x":29.5978780845924,"y":1},{"x":29.9978780845924,"y":2},{"x":30.3888599441103,"y":2},{"x":30.3888599441103,"y":0},{"x":29.9978780845924,"y":0}]}
,{
"name": "sORF_2",
"orfname": "sORF_2",
"gene_start": 6342,
"gene_end": 6449,
"gene_strand": "+",
"real_start": 2275287,
"real_end": 2275394 ,
"real_strand": "-",
"name": "sORF_2",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     30.2917633685407,
"motifs":    "RBS=CCCGGAAGCAATAGCATA<br>",
"function":  "",
"annotation":"",
"protein":"LSLACRTDSDCIDAFIQGRYTFIRQTLFSYRFNSRx",
"dna":"TTGAGTCTTGCTTGTCGCACCGATAGCGATTGCATCGATGCTTTCATTCAGGGGCGGTACACTTTTATCCGACAAACCTTGTTCTCCTATAGATTCAACTCTCGTTAA",
"points": [{"x":30.0383649883958,"y":0},{"x":30.0383649883958,"y":2},{"x":30.1451617486856,"y":2},{"x":30.5451617486856,"y":1},{"x":30.1451617486856,"y":0}]}
,{
"name": "sORF_17",
"orfname": "sORF_17",
"gene_start": 6436,
"gene_end": 6528,
"gene_strand": "-",
"real_start": 2275208,
"real_end": 2275300 ,
"real_strand": "+",
"name": "sORF_17",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     30.701463553261,
"motifs":    "RBS=ATCATCGAAAAGATTTTT<br>",
"function":  "",
"annotation":"",
"protein":"LFIVVIYYCIAFYCGTKIRKKLVIPSFNESx",
"dna":"TTGTTCATTGTGGTGATTTATTACTGTATTGCGTTTTATTGTGGAACGAAAATACGAAAGAAACTCGTTATCCCCTCTTTTAACGAGAGTTGA",
"points": [{"x":30.4835883105196,"y":1},{"x":30.8835883105196,"y":2},{"x":30.9193387960025,"y":2},{"x":30.9193387960025,"y":0},{"x":30.8835883105196,"y":0}]}
,{
"name": "orf00026",
"orfname": "orf00026",
"gene_start": 6521,
"gene_end": 8575,
"gene_strand": "+",
"real_start": 2273161,
"real_end": 2275215 ,
"real_strand": "-",
"name": "orf00026",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     35.7504854828778,
"motifs":    "",
"function":  "Dipeptidyl-peptidase 5 OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / CIP 103683 / JCM 12257 / NCTC 11834 / 2561) OX=431947 GN=dpp5 PE=1 SV=1",
"annotation":"Species='-'<br>match=99.415%|Evalue=0.0<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|B2RIT0|DPP5_PORG3>sp|B2RIT0|DPP5_PORG3</a>",
"protein":"MNKKIFSMMAASIIGSAAMTPSAGTNTGDHLTPELFMTLSRVSEMALSPDGKTAVYAVSFPDVKTNKATRELFTVNLDGSGRKQITDTESNEYAPVWMADGKRIAFMSNEGGSMQLWVMNADGTERRQLSNIEGGITGFLFSPDEKQVLFTKDIKFGKRTKDIYPDLDKATGRIITDLMYKHWDEWVETIPHPFIANATDGMITTGKDIMEGEPYEAPMKPWSGIEDFSWSPDGQNIAYASRKKTGMAYSLSTNSDIYIYNLASGRTHNISEGMMGYDTYPKFSPDGKSIAWISMERDGYESDLKRLFVADLATGKRTHVNPTFDYNVDMIQWAPDSKGIYFLACKEAETNLWEITLKTGKIRQITQGQHDYADFSVRNDVMLAKRHSFELPDDLYRVNLKNGAAQAVTAENKAILDRLTPIACEKRWMKTTDGGNMLTWVVLPPDFDKNKKYPAILYCQGGPQNTVSQFWSFRWNLRLMAEQGYIVIAPNRHGVPGFGQKWNEQISGDYGGQNMRDYLTAVDEMKKEPYVDGDRIGAVGASYGGFSVYWLAGHHDKRFAAFIAHAGIFNLEMQYATTEEMWFANWDIGGPFWEKDNVVAQRTYATSPHKYVQNWDTPILMIHGELDFRILASQAMAAFDAAQLRGVPSEMLIYPDENHWVLQPQNALLFHRTFFGWLDRWLKK",
"dna":"ATGAACAAAAAAATCTTTTCGATGATGGCTGCAAGCATCATTGGTTCGGCTGCTATGACCCCATCAGCCGGAACGAATACCGGAGACCATTTGACGCCGGAACTATTCATGACCCTGTCGCGGGTGAGCGAAATGGCCTTGTCTCCCGACGGTAAAACGGCTGTTTATGCCGTCAGCTTTCCCGATGTCAAAACGAACAAGGCTACCCGCGAGCTATTTACCGTCAATCTCGATGGTTCGGGGCGTAAGCAGATAACCGACACCGAGTCCAACGAATACGCTCCTGTCTGGATGGCCGACGGTAAGCGCATTGCTTTTATGAGCAACGAAGGCGGCAGCATGCAGCTTTGGGTCATGAACGCCGATGGTACGGAACGCCGCCAACTCAGCAATATCGAAGGTGGTATTACAGGTTTTCTTTTCTCCCCGGACGAGAAACAGGTGCTTTTCACCAAAGACATCAAATTCGGCAAACGCACCAAAGACATTTATCCCGATTTGGACAAAGCTACCGGACGCATCATCACCGATCTGATGTATAAGCATTGGGACGAGTGGGTGGAGACCATACCGCATCCCTTCATCGCGAACGCGACGGATGGAATGATCACCACCGGCAAAGACATCATGGAGGGCGAACCCTACGAGGCTCCGATGAAACCGTGGTCGGGTATCGAAGATTTCAGTTGGAGCCCTGACGGACAGAACATAGCATACGCCAGCCGCAAGAAAACGGGCATGGCATATTCTCTGTCTACCAACTCGGACATATATATCTATAATCTGGCTTCCGGCCGGACGCACAACATTTCCGAAGGGATGATGGGCTACGACACCTATCCGAAGTTCAGCCCCGACGGCAAGAGCATTGCATGGATCAGCATGGAGCGCGATGGATATGAAAGCGATCTGAAGCGTCTTTTCGTGGCGGATCTTGCCACAGGAAAGCGCACCCACGTAAACCCCACATTCGATTACAATGTGGATATGATCCAATGGGCACCGGACAGTAAGGGTATCTATTTCCTTGCCTGTAAGGAGGCAGAGACCAATCTGTGGGAGATTACGCTGAAAACGGGTAAGATCCGTCAGATCACGCAGGGACAGCACGACTATGCCGACTTCTCCGTGCGCAACGACGTTATGCTGGCTAAACGCCATTCTTTCGAACTCCCCGACGATCTCTATCGTGTGAATCTGAAGAATGGAGCGGCACAGGCTGTCACGGCAGAAAACAAAGCCATCCTCGATCGTCTCACTCCCATCGCCTGCGAAAAACGCTGGATGAAGACTACCGATGGAGGCAATATGCTTACATGGGTAGTACTGCCACCCGACTTCGATAAAAACAAGAAATATCCGGCTATACTCTATTGTCAGGGAGGTCCGCAGAATACCGTAAGCCAGTTCTGGTCGTTCCGCTGGAATCTCCGACTGATGGCCGAGCAGGGCTATATCGTCATTGCCCCCAACCGCCATGGTGTACCCGGATTCGGGCAGAAATGGAACGAACAGATCAGTGGCGACTACGGTGGCCAGAATATGCGTGACTATCTGACTGCCGTAGACGAAATGAAGAAAGAACCCTATGTCGATGGCGATCGCATCGGAGCGGTGGGTGCAAGCTACGGTGGCTTCTCCGTCTATTGGTTGGCAGGCCATCACGACAAGCGATTTGCCGCTTTTATCGCTCATGCCGGTATCTTCAATCTGGAGATGCAGTACGCCACAACCGAAGAGATGTGGTTTGCTAATTGGGATATAGGCGGTCCTTTCTGGGAGAAGGATAATGTAGTGGCTCAGCGTACCTATGCAACTTCGCCACACAAGTACGTGCAGAATTGGGATACACCTATCCTCATGATTCATGGCGAACTGGACTTCCGCATTCTTGCTTCACAGGCTATGGCTGCTTTCGATGCGGCACAGCTTCGTGGCGTTCCGAGCGAGATGTTGATCTATCCGGATGAAAACCACTGGGTACTCCAACCGCAGAATGCACTGCTATTCCATCGTACATTCTTCGGCTGGCTGGATCGTTGGCTGAAGAAG",
"points": [{"x":30.8861838677592,"y":0},{"x":30.8861838677592,"y":2},{"x":40.2147870979965,"y":2},{"x":40.6147870979965,"y":1},{"x":40.2147870979965,"y":0}]}
,{
"name": "orf00028",
"orfname": "orf00028",
"gene_start": 8660,
"gene_end": 9286,
"gene_strand": "+",
"real_start": 2272450,
"real_end": 2273076 ,
"real_strand": "-",
"name": "orf00028",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     42.499881589542,
"motifs":    "",
"function":  "D-ribitol-5-phosphate phosphatase OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) OX=226186 GN=BT_0970 PE=1 SV=1",
"annotation":"Species='-'<br>match=45.098%|Evalue=1.50e-61<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|Q8A947|RIBX_BACTN>sp|Q8A947|RIBX_BACTN</a>",
"protein":"MIRNIVFDLGGVLIHLNREESIRRFKAIGVADIEEMLDPYLQKGLFLDLESGRKSEAEFRTELSRYIGNELTYQQVYDALLGFLEEISAEKFDYIDSLRPDYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDNGENWIPAITRLLREQK",
"dna":"ATGATCAGGAACATCGTATTCGACCTCGGTGGAGTTCTCATTCACCTCAACCGAGAAGAATCCATCCGCCGATTCAAAGCCATAGGAGTAGCAGACATTGAAGAAATGCTCGACCCCTATCTGCAAAAAGGTCTCTTCCTCGACTTGGAGTCCGGGCGAAAGAGCGAGGCGGAATTCCGAACCGAGCTATCCCGATACATAGGAAATGAATTGACCTATCAGCAGGTGTACGATGCTCTCCTTGGTTTTCTTGAGGAGATTTCGGCCGAAAAGTTCGATTATATCGACTCGCTACGCCCCGATTATCGCCTCTTCCTCCTCTCCAACACCAATCCTTATGTCCTCGATTTGGCCATGAGTCCGCGTTTTCTTCCCTCAGGAAGGACGCTGGATAGTTTCTTTGATAAAGTCTATGCCAGTTGTCAGATGGGGAAATACAAACCCAATGAAGATATTTTCCTCGAAATGATAGCCGACAGCGGTATGAAGCCGGAGGAAACCCTCTTCATCGACGACGGACCGGCTAATGTGGCAACAGCCGAACGACTCGGTTTCCACACCTATTGCCCCGACAATGGGGAAAACTGGATCCCTGCCATTACTCGACTCCTTCGCGAACAGAAA",
"points": [{"x":41.0173826552361,"y":0},{"x":41.0173826552361,"y":2},{"x":43.5823805238479,"y":2},{"x":43.9823805238479,"y":1},{"x":43.5823805238479,"y":0}]}
,{
"name": "orf00030",
"orfname": "orf00030",
"gene_start": 9348,
"gene_end": 9644,
"gene_strand": "-",
"real_start": 2272092,
"real_end": 2272388 ,
"real_strand": "+",
"name": "orf00030",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     44.9770283711457,
"motifs":    "",
"function":  "",
"annotation":"",
"protein":"VEMVSNPQGAEVYINGDKMGQTPLQLSLKADKSYTVEFRIPGKQPIIRIINNRVEAKWVVLDVLGGLIPVAIDAITGNWYGLDQNKLNVDFTMQEPTK",
"dna":"GTGGAAATGGTTTCCAACCCACAGGGAGCAGAAGTTTACATCAATGGTGACAAGATGGGACAAACGCCCTTGCAACTCTCGCTCAAGGCTGACAAATCCTACACCGTGGAATTTCGTATTCCGGGTAAACAGCCCATCATACGTATAATCAACAACCGTGTGGAAGCCAAGTGGGTGGTATTGGATGTACTCGGTGGTCTTATTCCCGTGGCTATCGATGCTATTACAGGCAACTGGTACGGACTGGATCAGAATAAGCTGAACGTGGACTTCACGATGCAAGAGCCTACGAAA",
"points": [{"x":44.2760384597168,"y":1},{"x":44.6760384597168,"y":2},{"x":45.6780182825747,"y":2},{"x":45.6780182825747,"y":0},{"x":44.6760384597168,"y":0}]}
,{
"name": "sORF_3",
"orfname": "sORF_3",
"gene_start": 9628,
"gene_end": 9774,
"gene_strand": "+",
"real_start": 2271962,
"real_end": 2272108 ,
"real_strand": "-",
"name": "sORF_3",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     45.9479941268413,
"motifs":    "RBS=TGCTCCCTGTGGG<br>",
"function":  "",
"annotation":"",
"protein":"LETISTACVCLPKRVAHPVIVAKQSAPQAKHSNAFFIVLFLFFFAPIIx",
"dna":"TTGGAAACCATTTCCACAGCATGCGTCTGTTTGCCGAAAAGAGTGGCACACCCGGTAATCGTAGCTAAGCAAAGTGCACCGCAAGCGAAGCATAGTAATGCTTTTTTCATTGTATTGTTTTTATTTTTTTTCGCCCCCATAATTTAG",
"points": [{"x":45.6022355894473,"y":0},{"x":45.6022355894473,"y":2},{"x":45.8937526642353,"y":2},{"x":46.2937526642353,"y":1},{"x":45.8937526642353,"y":0}]}
,{
"name": "sORF_16",
"orfname": "sORF_16",
"gene_start": 9734,
"gene_end": 9925,
"gene_strand": "-",
"real_start": 2271811,
"real_end": 2272002 ,
"real_strand": "+",
"name": "sORF_16",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     46.5566238810212,
"motifs":    "RBS=GACACACATCGTCTCCTC<br>",
"function":  "",
"annotation":"",
"protein":"LKGSMVFNHIHSLCYFCCPKTRYKSLTEHRKRTYHLYEKDDYASIIFPYRSKLWGRKKIKTIQx",
"dna":"TTGAAAGGCAGTATGGTTTTTAACCATATACATAGTTTATGTTATTTTTGCTGTCCGAAAACTCGATATAAATCCCTTACGGAACATCGAAAAAGAACATATCATTTGTATGAGAAGGATGACTATGCCTCCATCATCTTTCCATACCGGTCTAAATTATGGGGGCGAAAAAAAATAAAAACAATACAATGA",
"points": [{"x":46.1042959314167,"y":1},{"x":46.5042959314167,"y":2},{"x":47.0089518306257,"y":2},{"x":47.0089518306257,"y":0},{"x":46.5042959314167,"y":0}]}
,{
"name": "105.3;Nigrescin",
"orfname": "orf00033",
"gene_start": 9971,
"gene_end": 11137,
"gene_strand": "-",
"real_start": 2270599,
"real_end": 2271765 ,
"real_strand": "+",
"name": "105.3;Nigrescin",
"color":     "#70c947",
"yline":     10,
"angle":     -60,
"xtext":     49.9881589541988,
"motifs":    "",
"function":  "105.3;Nigrescin",
"annotation":"Evalue=9.54e-111 match=44.533%;",
"protein":"MTMSTILFDDIRPYCDQEAPAVIERLLSSAEYRYVFGKMMPDVKPQEFEQMMLRCKSTGEFKHIFGYTAVKAVSEKTTFSLSLSGRSRIPDNGAYIFISNHRDIVLDSAFLNLLLAEIDYNMPQIAIGDNLLVKPWIEDFVRLNGSFIVRRGINMRELIAQSQRLSAYIRHTITQTKDSIWIAQREGRAKDADDRTQSSVLKMLAMSGEDGGIKSLLNLNIVPLSLSYEYDPCDYLKAREMLCKQRDPLYKKPVGEDLLNMQTGIFGYKGRVHFAIGTPLRELAESIPADAPHARQFTEAGKLIDVEIHRRYRLYPGNYVAWDLLDGCDHAGSHYSEEEKETFVNYLSAQIAKVEMQDKDEEELKRLILIMYANPARAYYATQDPTNV",
"dna":"ATGACTATGAGTACAATACTATTTGACGACATCAGACCATATTGCGATCAGGAAGCACCGGCCGTAATCGAACGTCTGCTGAGTTCGGCCGAATATCGGTATGTGTTCGGCAAAATGATGCCGGACGTAAAGCCACAGGAGTTCGAACAAATGATGTTGCGCTGCAAATCCACCGGTGAATTCAAACACATCTTCGGCTATACAGCGGTTAAGGCAGTGAGTGAGAAGACGACATTCAGCCTCTCGTTAAGTGGCAGGAGTCGTATCCCTGACAATGGAGCCTACATTTTTATCTCCAACCACCGAGACATCGTATTGGACTCGGCTTTCCTCAACCTGCTGCTTGCTGAGATCGACTACAATATGCCACAGATAGCCATCGGAGACAACCTCCTTGTGAAGCCGTGGATAGAAGACTTCGTACGACTCAACGGGAGCTTTATCGTACGTCGCGGGATCAATATGCGCGAACTGATAGCACAGTCGCAGAGACTATCGGCATACATACGGCATACGATTACCCAAACGAAAGATTCCATCTGGATAGCCCAACGCGAAGGACGGGCCAAAGATGCCGACGATCGCACGCAGAGCAGTGTGCTCAAGATGCTTGCCATGAGCGGTGAGGACGGAGGAATCAAGAGTCTGCTCAATCTCAACATCGTACCGCTCTCTTTGAGCTATGAGTATGACCCCTGCGATTACCTGAAAGCGCGCGAAATGCTTTGCAAGCAGCGCGATCCGTTATATAAGAAACCCGTCGGGGAGGATCTGCTGAATATGCAGACAGGTATTTTCGGCTACAAAGGACGTGTTCACTTTGCCATAGGTACACCCCTAAGAGAATTGGCCGAGAGTATCCCGGCAGATGCGCCGCATGCCCGGCAGTTCACAGAGGCAGGCAAACTGATCGATGTAGAAATCCATCGTCGCTACCGTCTCTATCCGGGCAATTATGTAGCATGGGATCTTCTGGACGGATGCGACCACGCCGGTTCGCATTATAGCGAGGAGGAAAAAGAGACCTTTGTAAACTATCTGTCCGCACAAATCGCCAAAGTGGAGATGCAGGATAAGGATGAAGAGGAATTGAAACGACTGATTCTGATCATGTATGCCAATCCGGCAAGGGCATATTATGCTACTCAAGATCCGACGAATGTA",
"points": [{"x":47.2268270733671,"y":1},{"x":47.6268270733671,"y":2},{"x":52.7494908350305,"y":2},{"x":52.7494908350305,"y":0},{"x":47.6268270733671,"y":0}]}
,{
"name": "orf00034",
"orfname": "orf00034",
"gene_start": 11156,
"gene_end": 12148,
"gene_strand": "-",
"real_start": 2269588,
"real_end": 2270580 ,
"real_strand": "+",
"name": "orf00034",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     55.1887462700706,
"motifs":    "",
"function":  "D-alanine--D-alanine ligase OS=Porphyromonas gingivalis (strain ATCC BAA-308 / W83) OX=242619 GN=ddl PE=3 SV=1",
"annotation":"Species='-'<br>match=99.091%|Evalue=0.0<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|Q7MWA2|DDL_PORGI>sp|Q7MWA2|DDL_PORGI</a>",
"protein":"MKKPIVAVIAGGYSGEHSVSLKSAAGILSWLGSEPFSTFLVLIERDRWSVRVSEQREVPLDKNDFSFDLDGERIRFDYAYITIHGTPGENGLLQGYLDMIGIPYNTGDTLVESLTFNKYVCNRFLSGFGIRIADSMRLTGRDTQPDVADLTARMGLPLFVKPNVGGSSIATTKVVEAAQLLPAIKQAFSEGEEVMIERLICGTEVTCGAFLRKKEVVALPVTEVVAHNEFFDFDAKYNGAVEEITPARISDEATRLIQTMTARIYKLLNARGIIRVDYIIEADGIPTLLEVNTTPGMTPTSFIPQQVRAAGMDMKEVLCTIIRDGLNETQ",
"dna":"ATGAAAAAACCAATTGTGGCTGTCATTGCAGGCGGTTATTCGGGCGAACATTCGGTTTCGCTCAAAAGTGCTGCCGGCATTCTGTCCTGGCTGGGAAGCGAGCCTTTCTCCACCTTTCTTGTTCTGATCGAACGTGATCGCTGGTCGGTAAGAGTATCGGAGCAGAGAGAGGTTCCACTGGATAAGAACGATTTCAGCTTTGATCTCGATGGCGAACGAATACGGTTTGACTATGCTTATATCACCATACATGGAACTCCGGGAGAGAACGGTCTGCTTCAGGGGTATCTCGACATGATCGGCATCCCATACAATACGGGTGACACGCTCGTCGAATCCCTGACTTTCAACAAATATGTGTGCAATCGTTTTCTCTCCGGCTTCGGTATCCGCATTGCCGATTCTATGCGACTGACCGGGCGAGATACTCAGCCCGATGTGGCGGATCTGACAGCACGTATGGGGCTTCCTCTCTTCGTAAAACCCAATGTGGGAGGTTCCAGCATCGCGACTACCAAGGTGGTGGAAGCTGCACAGCTCCTTCCGGCAATAAAACAAGCCTTCTCGGAAGGCGAAGAGGTGATGATAGAGCGTCTGATATGCGGTACCGAGGTTACCTGCGGGGCATTCCTCAGGAAAAAAGAAGTGGTCGCATTGCCTGTTACAGAAGTTGTCGCACATAATGAGTTTTTCGACTTCGATGCCAAATACAACGGGGCTGTAGAGGAAATCACACCGGCAAGAATCAGCGATGAAGCCACTCGATTGATACAGACCATGACTGCGCGCATATACAAGCTTCTCAACGCTCGGGGCATCATACGTGTGGACTATATCATCGAAGCGGATGGTATTCCCACGCTGCTGGAAGTGAACACGACACCGGGCATGACCCCTACGAGCTTTATCCCCCAGCAGGTTCGGGCAGCCGGAATGGATATGAAAGAGGTGCTTTGCACTATCATTCGGGATGGACTGAATGAGACCCAA",
"points": [{"x":52.8394827831194,"y":1},{"x":53.2394827831194,"y":2},{"x":57.5380097570217,"y":2},{"x":57.5380097570217,"y":0},{"x":53.2394827831194,"y":0}]}
,{
"name": "orf00036",
"orfname": "orf00036",
"gene_start": 12215,
"gene_end": 13336,
"gene_strand": "-",
"real_start": 2268400,
"real_end": 2269521 ,
"real_strand": "+",
"name": "orf00036",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     60.5101122531142,
"motifs":    "",
"function":  "Uncharacterized RNA pseudouridine synthase Cpar_0723 OS=Chlorobaculum parvum (strain NCIB 8327) OX=517417 GN=Cpar_0723 PE=3 SV=1",
"annotation":"Species='-'<br>match=47.484%|Evalue=3.15e-98<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|O50310|Y723_CHLP8>sp|O50310|Y723_CHLP8</a>",
"protein":"MEEELQYRMTPEMAELFDEDDAEDISDGGLDPEEEDRYEHFRTVADPGQTLIRIDKFLVDRMNNATRSRIQQAAEAGAIFVNGRPVKSNYRIKPGDVVTLELLRPRRELEIIPEDIPLDIVYEDDVLLVINKPAGLVVHPGHGNYTGTLVNALAYYLREDPEYDPMDPSLGLVHRIDKDTSGLLVVAKRAEAKSDLCKQFYYKTTHRSYRALVWGRFDYPIGTITGNIGRDLKDRLQMAVFPPDGDIGKPAVTHYQVLEELAYVSWIECRLETGRTHQIRAHMKHIGHTLFADERYGGDQILRGNNTANYRRFVQNCLAICPRQALHAKTLGFRHPVTGVEMQFDSDIPADLTTLLERWRTFIACISAGQDYI",
"dna":"ATGGAGGAAGAACTTCAGTACCGGATGACTCCCGAGATGGCGGAGCTATTCGACGAAGACGATGCAGAGGACATCTCGGACGGCGGACTCGACCCGGAGGAAGAGGACAGATACGAACATTTCCGCACTGTAGCAGATCCGGGACAGACACTTATTCGTATCGACAAATTCCTTGTCGACAGGATGAACAACGCCACACGCAGCCGTATCCAACAAGCGGCTGAAGCCGGTGCCATATTCGTCAATGGCCGACCGGTAAAGAGCAACTACCGGATCAAACCGGGCGATGTGGTCACGTTGGAACTCCTCCGGCCACGACGGGAATTGGAGATCATTCCCGAAGATATTCCACTCGATATAGTGTATGAAGACGATGTACTGCTCGTGATCAATAAGCCTGCCGGATTAGTGGTACACCCCGGCCATGGCAATTACACGGGTACACTGGTCAATGCACTGGCCTACTACCTCCGAGAGGATCCTGAATACGACCCCATGGATCCGAGTCTGGGACTCGTACACCGTATAGACAAGGACACGAGCGGCCTTCTGGTTGTTGCCAAGAGGGCCGAAGCCAAATCGGACTTGTGCAAGCAATTCTATTATAAGACGACGCATCGTTCCTATCGTGCACTGGTATGGGGACGTTTCGACTACCCGATCGGAACCATTACCGGCAATATAGGACGCGACCTGAAAGACCGCCTGCAAATGGCGGTATTCCCTCCCGATGGAGATATTGGCAAACCGGCCGTAACGCATTATCAGGTCTTGGAAGAACTGGCATACGTCAGCTGGATAGAATGCCGTCTGGAGACAGGGCGTACCCATCAGATCAGGGCACACATGAAGCACATAGGCCATACGTTGTTTGCTGACGAGCGTTATGGCGGCGATCAAATCCTGAGAGGAAACAATACGGCCAATTACCGCCGATTCGTGCAGAACTGTTTGGCTATCTGTCCACGACAGGCTCTGCATGCCAAGACATTAGGCTTTCGCCATCCTGTCACGGGAGTGGAGATGCAGTTCGACTCCGATATACCTGCCGATCTTACCACTTTGCTTGAGCGTTGGCGTACGTTTATCGCCTGCATATCTGCAGGACAGGACTATATC",
"points": [{"x":57.855349784493,"y":1},{"x":58.255349784493,"y":2},{"x":63.1648747217354,"y":2},{"x":63.1648747217354,"y":0},{"x":58.255349784493,"y":0}]}
,{
"name": "orf00037",
"orfname": "orf00037",
"gene_start": 13350,
"gene_end": 14006,
"gene_strand": "-",
"real_start": 2267730,
"real_end": 2268386 ,
"real_strand": "+",
"name": "orf00037",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     64.7847297873348,
"motifs":    "PF00069",
"function":  "Serine/threonine-protein kinase PrkC OS=Staphylococcus aureus (strain Newman) OX=426430 GN=prkC PE=1 SV=1",
"annotation":"Species='-'<br>match=24.219%|Evalue=1.02e-04<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|A6QGC0|PRKC_STAAE>sp|A6QGC0|PRKC_STAAE</a>",
"protein":"MQLKNFHHKYPVLFHLILMTLASGLILMGILFGLDIYTRHDSSIVMPELRGKDLKEAERLLSSHNLRYELVDSVYDKSLAPGVVVEMVPQSGNTVKPGRIIFLSINARSARKGIVPDLKDMSGRQALAILKGLGFEQVTERYISGDFVNLTDGVELADGRNVLAGTRLPITTPLVLRVINGYAPLPADSSLIDESITYGSSQDSASGKTEEENSESWW",
"dna":"ATGCAACTAAAGAATTTTCATCATAAATATCCCGTCCTCTTCCACCTGATTTTGATGACTTTGGCTTCAGGGCTTATCCTCATGGGTATCTTGTTCGGACTGGATATTTACACGAGACACGACAGCTCTATCGTGATGCCGGAGTTGCGTGGCAAAGACTTGAAGGAGGCAGAGCGTTTGCTGTCGAGCCATAATCTTCGCTACGAACTTGTCGATTCCGTTTATGACAAATCCTTGGCTCCGGGTGTCGTAGTAGAAATGGTTCCACAGAGCGGCAATACCGTCAAACCGGGGCGGATCATTTTCCTTTCGATCAATGCGAGATCGGCACGGAAGGGGATCGTCCCTGATCTGAAAGATATGTCCGGCCGCCAAGCTCTGGCCATCCTGAAAGGATTGGGCTTCGAACAAGTCACAGAGCGATACATCTCAGGCGATTTTGTCAATCTGACAGACGGAGTCGAACTGGCCGACGGCCGGAATGTACTTGCCGGTACTCGCCTGCCGATAACGACTCCGTTGGTGCTACGGGTGATCAACGGCTATGCGCCGCTTCCTGCTGATTCGTCACTGATCGACGAATCGATCACCTACGGTTCATCGCAGGACAGTGCTTCGGGGAAGACCGAAGAGGAGAATAGCGAATCGTGGTGG",
"points": [{"x":63.2311845782219,"y":1},{"x":63.6311845782219,"y":2},{"x":66.3382749964477,"y":2},{"x":66.3382749964477,"y":0},{"x":63.6311845782219,"y":0}]}
,{
"name": "sORF_15",
"orfname": "sORF_15",
"gene_start": 13997,
"gene_end": 14206,
"gene_strand": "-",
"real_start": 2267530,
"real_end": 2267739 ,
"real_strand": "+",
"name": "sORF_15",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     66.7906029460522,
"motifs":    "RBS=AATGG<br>",
"function":  "",
"annotation":"",
"protein":"MQLVAFESTLMIRIKPPIRINAEDCKAKFELTAPGCQPISGTGHCFSVCCFFPYFELYFGTKNIPLACNx",
"dna":"ATGCAGCTTGTCGCATTCGAATCCACCTTAATGATCCGGATAAAGCCGCCGATTAGGATTAACGCCGAAGACTGCAAAGCAAAATTCGAATTAACGGCTCCCGGCTGCCAACCCATTTCCGGGACAGGCCACTGTTTTTCTGTTTGCTGCTTTTTTCCGTACTTTGAACTGTATTTTGGAACAAAAAATATTCCGTTGGCATGCAACTAA",
"points": [{"x":66.2956472315635,"y":1},{"x":66.6956472315635,"y":2},{"x":67.2855586605409,"y":2},{"x":67.2855586605409,"y":0},{"x":66.6956472315635,"y":0}]}
,{
"name": "sORF_4",
"orfname": "sORF_4",
"gene_start": 14005,
"gene_end": 14148,
"gene_strand": "+",
"real_start": 2267588,
"real_end": 2267731 ,
"real_strand": "-",
"name": "sORF_4",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     66.6721924880405,
"motifs":    "RBS=TGAAAATTCTTTAGTTGC<br>",
"function":  "",
"annotation":"",
"protein":"MPTEYFLFQNTVQSTEKSSKQKNSGLSRKWVGSREPLIRILLCSLRRx",
"dna":"ATGCCAACGGAATATTTTTTGTTCCAAAATACAGTTCAAAGTACGGAAAAAAGCAGCAAACAGAAAAACAGTGGCCTGTCCCGGAAATGGGTTGGCAGCCGGGAGCCGTTAATTCGAATTTTGCTTTGCAGTCTTCGGCGTTAA",
"points": [{"x":66.3335385781272,"y":0},{"x":66.3335385781272,"y":2},{"x":66.6108463979539,"y":2},{"x":67.0108463979539,"y":1},{"x":66.6108463979539,"y":0}]}
,{
"name": "orf00039",
"orfname": "orf00039",
"gene_start": 14181,
"gene_end": 14318,
"gene_strand": "+",
"real_start": 2267418,
"real_end": 2267555 ,
"real_strand": "-",
"name": "orf00039",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     67.4915928574812,
"motifs":    "",
"function":  "",
"annotation":"",
"protein":"VDSNATSCIHFGGIDAKPLLLQMNAYSLPAAEIRTKNGRIVARVF",
"dna":"GTGGATTCGAATGCGACAAGCTGCATCCATTTTGGAGGCATTGATGCCAAACCATTGCTCCTACAGATGAATGCCTACAGCCTGCCGGCTGCCGAAATACGAACCAAAAACGGTCGGATTGTGGCGCGTGTTTTC",
"points": [{"x":67.1671482025292,"y":0},{"x":67.1671482025292,"y":2},{"x":67.4160375124331,"y":2},{"x":67.8160375124331,"y":1},{"x":67.4160375124331,"y":0}]}
,{
"name": "sORF_5",
"orfname": "sORF_5",
"gene_start": 14321,
"gene_end": 14419,
"gene_strand": "+",
"real_start": 2267317,
"real_end": 2267415 ,
"real_strand": "-",
"name": "sORF_5",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     68.0623312650973,
"motifs":    "RBS=GGCGCGTGTTTTCTGAAA<br>",
"function":  "",
"annotation":"",
"protein":"MWRENFSVLERKFFASHTKTKIFSPYVFRSVQx",
"dna":"ATGTGGCGTGAGAATTTTTCTGTTTTGGAGCGAAAATTTTTTGCTTCCCACACGAAAACGAAAATTTTCTCGCCCTACGTTTTTCGGAGCGTACAATAG",
"points": [{"x":67.8302467673945,"y":0},{"x":67.8302467673945,"y":2},{"x":67.8944157628002,"y":2},{"x":68.2944157628002,"y":1},{"x":67.8944157628002,"y":0}]}
,{
"name": "sORF_6",
"orfname": "sORF_6",
"gene_start": 14439,
"gene_end": 14540,
"gene_strand": "+",
"real_start": 2267196,
"real_end": 2267297 ,
"real_strand": "-",
"name": "sORF_6",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     68.628333254393,
"motifs":    "RBS=AAAAGTTTGGTGTGACGT<br>",
"function":  "",
"annotation":"",
"protein":"VTCPEKSYSILICLVHISLTITIFSVVLYRFINx",
"dna":"GTGACGTGTCCTGAAAAAAGCTACTCCATCCTGATCTGCCTTGTGCATATTTCCCTTACCATCACTATATTTTCTGTAGTTTTGTACCGCTTCATCAATTAA",
"points": [{"x":68.3891441292095,"y":0},{"x":68.3891441292095,"y":2},{"x":68.4675223795766,"y":2},{"x":68.8675223795766,"y":1},{"x":68.4675223795766,"y":0}]}
,{
"name": "orf00043",
"orfname": "orf00043",
"gene_start": 14554,
"gene_end": 15156,
"gene_strand": "+",
"real_start": 2266580,
"real_end": 2267182 ,
"real_strand": "-",
"name": "orf00043",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     70.3594941505234,
"motifs":    "",
"function":  "Riboflavin synthase OS=Actinobacillus pleuropneumoniae OX=715 GN=ribE PE=3 SV=1",
"annotation":"Species='-'<br>match=40.404%|Evalue=2.12e-42<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|P50854|RISA_ACTPL>sp|P50854|RISA_ACTPL</a>",
"protein":"MFSGIVEEYAQVTDLRHENDNLHITMTCSFVNELKIDQSIAHNGVCLTVVSKTDTTYTVTAIRETLERSNLGLLQIGDLVNLERSMMMGGRLDGHIVQGHVDQTAVCTAVEEAGGSHYYSFEYKLDKEMARQGYMTVEKGSVCVNGVSLTVCDSGMNNFRVAIIPYTRDHTNFCRIVPGSVVNLEFDIVGKYLSKMLQYQ",
"dna":"ATGTTTTCCGGAATCGTAGAAGAATATGCCCAAGTGACGGATCTTCGTCACGAAAATGACAATCTGCACATCACGATGACGTGTTCTTTCGTCAATGAACTCAAGATAGACCAAAGCATCGCACACAATGGCGTATGCCTCACCGTAGTCAGCAAGACGGACACCACCTATACCGTGACTGCCATACGCGAAACCCTCGAACGTTCCAACCTCGGACTCCTCCAAATAGGCGATCTCGTCAATCTGGAACGAAGCATGATGATGGGCGGCCGGCTCGATGGACACATCGTGCAGGGACACGTAGATCAGACGGCTGTATGTACCGCTGTGGAAGAAGCCGGCGGCAGTCACTACTATTCGTTCGAATACAAGCTCGACAAGGAGATGGCTCGCCAAGGCTATATGACCGTGGAGAAAGGATCCGTATGCGTCAATGGCGTGAGCCTGACCGTATGCGACTCCGGCATGAACAACTTCCGTGTGGCTATCATCCCCTATACTCGCGACCATACGAACTTCTGCCGCATTGTCCCGGGTAGTGTGGTCAATCTGGAATTCGACATTGTGGGGAAATATCTCAGCAAGATGCTCCAATACCAA",
"points": [{"x":68.9338322360631,"y":0},{"x":68.9338322360631,"y":2},{"x":71.3851560649836,"y":2},{"x":71.7851560649837,"y":1},{"x":71.3851560649836,"y":0}]}
,{
"name": "Cyclodehydration",
"orfname": "orf00044",
"gene_start": 15153,
"gene_end": 15704,
"gene_strand": "+",
"real_start": 2266032,
"real_end": 2266583 ,
"real_strand": "-",
"name": "Cyclodehydration",
"color":     "#6ba3ff",
"yline":     10,
"angle":     -60,
"xtext":     73.0758300573107,
"motifs":    "PF00881;PF00881",
"function":  "Putative NADH dehydrogenase/NAD(P)H nitroreductase AF_0226 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) OX=224325 GN=AF_0226 PE=3 SV=1",
"annotation":"Species='-'<br>match=35.028%|Evalue=3.35e-21<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|O30013|Y226_ARCFU>sp|O30013|Y226_ARCFU</a>",
"protein":"MNPNDFYSLIEQRQSDRKFDPDRPVPEDVLQRIIEAGRLSPSACNSQPWSFVVVTDPDTRRQLAEASSSRLLGMNHFTRQAPVHIVLVEEKANFTATIGGKMKKIHYANIDLGIAAAHITLAATAEGLGSCIIGWVNEAKIREILGIPSGRRVVMNIMLGYSADPHRAKKRKETSEVLHREKW",
"dna":"ATGAACCCGAACGACTTTTACTCCCTGATCGAACAGCGACAGAGCGATCGCAAGTTCGATCCCGACCGCCCCGTACCCGAAGACGTGCTTCAGCGCATCATCGAAGCGGGGCGTCTCTCCCCCTCAGCCTGCAATTCGCAGCCTTGGAGCTTTGTCGTCGTCACCGATCCCGACACTCGCAGACAACTGGCTGAAGCCTCATCGTCACGGTTATTGGGTATGAATCACTTCACGCGTCAGGCTCCCGTACACATCGTATTAGTCGAAGAGAAAGCCAACTTCACGGCGACCATCGGGGGGAAAATGAAAAAAATCCACTATGCCAATATCGACCTCGGCATAGCCGCCGCACACATCACGCTGGCAGCCACAGCCGAAGGTCTCGGCAGCTGCATCATAGGCTGGGTAAACGAAGCCAAGATCCGCGAAATACTGGGCATTCCCTCCGGACGCCGCGTAGTCATGAACATCATGCTCGGCTATTCCGCCGATCCGCACAGGGCCAAGAAGCGCAAAGAAACCTCGGAGGTTCTTCACCGCGAGAAGTGG",
"points": [{"x":71.7709468100223,"y":0},{"x":71.7709468100223,"y":2},{"x":73.980713304599,"y":2},{"x":74.3807133045991,"y":1},{"x":73.980713304599,"y":0}]}
,{
"name": "orf00046",
"orfname": "orf00046",
"gene_start": 15763,
"gene_end": 16977,
"gene_strand": "+",
"real_start": 2264759,
"real_end": 2265973 ,
"real_strand": "-",
"name": "orf00046",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     77.5351679060295,
"motifs":    "",
"function":  "Probable cysteine desulfurase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=csd PE=3 SV=1",
"annotation":"Species='-'<br>match=49.010%|Evalue=2.09e-146<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|Q9KPQ7|CSD_VIBCH>sp|Q9KPQ7|CSD_VIBCH</a>",
"protein":"MYDIQKIREDFPILHTRVHGKPLIYLDNAATTQKPIAVLDQIERAYRTFNANIHRGVHHLSQVATEQHENARKRIARYIGAEDPKEVLFTRGTTEAINLVASSFGQAFVRSGDEIIISTLEHHSNIVPWQLLAERTGARLRVIWLTESGELDMEHFRSLLNERTKIVSIAHVSNVLGTINPIRRITDLAHAAGVPVLVDGAQAIAHCRVDVRELGADFYAFSGHKVYAPTGIGVLYGKAEWLEKIPPYHGGGEMIAKVTFEKTTYNELPYKFEAGTPDYVGSTALATALDYIEGLGLEAIATHEDKLLRMATEGVRTFPNARIIGEAEHKSGVLSFLIGDIHPYDLGMLLDRLGIAIRTGHHCAEPLLESMGLNATARASFALYNTEEEVEQFLQALKRVVSMF",
"dna":"ATGTACGACATTCAAAAAATCAGGGAGGACTTCCCCATCCTCCATACCCGGGTACACGGTAAACCTCTCATCTATCTGGACAATGCCGCCACGACACAGAAACCCATAGCGGTATTAGACCAAATCGAACGAGCCTACCGCACATTCAATGCCAATATCCACCGCGGCGTACACCATCTGAGTCAGGTGGCTACGGAGCAACACGAAAATGCTCGCAAGCGGATAGCCCGCTACATCGGAGCGGAAGACCCCAAAGAGGTGCTCTTTACGCGCGGCACCACAGAGGCAATCAATCTGGTGGCCTCTTCGTTCGGCCAAGCTTTCGTCCGCTCCGGCGATGAGATTATCATCAGTACCCTCGAACACCATTCGAATATCGTCCCATGGCAACTTTTGGCCGAACGTACCGGTGCTCGACTCAGAGTGATCTGGCTGACCGAATCGGGCGAACTGGATATGGAACATTTCCGGTCTCTGCTGAACGAACGTACCAAAATCGTTTCGATAGCCCACGTCAGCAATGTGCTCGGCACCATCAATCCCATACGCCGGATAACGGATTTGGCTCATGCTGCCGGAGTACCCGTTCTGGTCGATGGAGCACAAGCCATCGCCCACTGCCGGGTAGATGTTCGGGAGTTGGGAGCGGATTTCTACGCCTTCTCCGGCCATAAAGTCTACGCACCCACAGGAATAGGCGTATTGTATGGCAAAGCGGAGTGGTTGGAGAAGATCCCCCCCTACCACGGTGGCGGAGAGATGATCGCCAAGGTGACATTCGAAAAGACCACCTACAACGAATTGCCCTATAAGTTCGAAGCCGGCACGCCGGACTATGTCGGCTCCACGGCTTTGGCCACAGCTCTCGACTACATCGAGGGATTGGGCTTGGAAGCCATAGCCACACATGAAGACAAACTCCTGCGAATGGCCACCGAAGGCGTGAGAACTTTCCCCAATGCCCGTATCATCGGAGAAGCCGAACATAAGAGCGGTGTACTCTCTTTCCTTATAGGGGACATTCATCCCTATGACCTCGGCATGCTGCTCGATCGGCTGGGTATAGCCATCCGCACCGGACATCACTGTGCCGAACCGCTACTCGAAAGCATGGGACTCAATGCCACGGCTCGCGCCTCCTTTGCCCTCTACAATACCGAGGAGGAAGTGGAGCAATTCCTCCAAGCCTTGAAGCGCGTAGTAAGCATGTTC",
"points": [{"x":74.6601619855066,"y":0},{"x":74.6601619855066,"y":2},{"x":80.0101738265524,"y":2},{"x":80.4101738265524,"y":1},{"x":80.0101738265524,"y":0}]}
,{
"name": "orf00048",
"orfname": "orf00048",
"gene_start": 16988,
"gene_end": 17593,
"gene_strand": "+",
"real_start": 2264143,
"real_end": 2264748 ,
"real_strand": "-",
"name": "orf00048",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     81.8950409700185,
"motifs":    "",
"function":  "Ribonuclease HII OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / CIP 103683 / JCM 12257 / NCTC 11834 / 2561) OX=431947 GN=rnhB PE=3 SV=1",
"annotation":"Species='-'<br>match=99.005%|Evalue=7.93e-148<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|B2RIU1|RNH2_PORG3>sp|B2RIU1|RNH2_PORG3</a>",
"protein":"MLLSRYIDDDLRECGCDEAGRGCLAGPVYAAAVILPAGFSHPLLNDSKQLSEKQRYTLRPVIESEAIAWGIGIVSPQEIDEINILRASFLAMHRAIEQLPFRPERLLIDGNRFDPFEQIPHHCIVGGDARYRSIAAASILAKTYRDDSMLRLNKDFPMYGWERNKGYPSPAHKSAIRRFGVSPHHRLTFRGVVDADRPTTE",
"dna":"ATGCTGCTCTCTCGCTACATAGACGATGACTTGCGTGAATGCGGTTGCGACGAAGCCGGTCGTGGCTGTCTGGCCGGTCCCGTCTATGCAGCGGCTGTGATCCTACCGGCCGGCTTTTCTCATCCCCTGCTGAATGATTCGAAGCAACTGAGTGAAAAGCAACGCTACACCCTTCGCCCCGTCATAGAATCCGAGGCTATCGCATGGGGGATAGGCATCGTGAGTCCGCAGGAGATAGACGAGATCAATATCCTCAGAGCTTCCTTTCTTGCGATGCATCGCGCCATAGAGCAGTTACCTTTTCGCCCCGAAAGATTGCTGATCGACGGCAATCGGTTCGATCCTTTCGAACAAATCCCTCACCACTGTATCGTGGGAGGCGATGCCCGCTATCGCTCCATCGCAGCAGCTTCCATTTTGGCCAAAACCTATCGGGACGACTCGATGCTCCGTCTGAATAAGGACTTCCCGATGTACGGATGGGAGCGCAACAAAGGTTATCCGTCACCTGCACACAAATCCGCTATTCGTCGTTTCGGAGTTTCGCCACATCACCGTCTTACTTTCCGTGGAGTGGTGGATGCAGACCGGCCGACAACAGAA",
"points": [{"x":80.4622744280775,"y":0},{"x":80.4622744280775,"y":2},{"x":82.9278075119595,"y":2},{"x":83.3278075119595,"y":1},{"x":82.9278075119595,"y":0}]}
,{
"name": "orf00049",
"orfname": "orf00049",
"gene_start": 17661,
"gene_end": 17846,
"gene_strand": "+",
"real_start": 2263890,
"real_end": 2264075 ,
"real_strand": "-",
"name": "orf00049",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     84.0880026523943,
"motifs":    "",
"function":  "",
"annotation":"",
"protein":"MLRKKAIQIRLNEAEHKAVETYCSRFKVENRSRWIRETLMKEVIHRLESDTPLLFREEEMR",
"dna":"ATGCTCCGAAAGAAAGCCATTCAGATCCGACTGAACGAAGCGGAGCACAAGGCCGTCGAGACCTATTGCAGCCGCTTCAAAGTAGAGAACCGCTCCCGTTGGATCCGGGAAACGCTGATGAAAGAAGTGATACACCGGTTAGAAAGCGACACTCCCTTGCTTTTTCGAGAGGAGGAAATGCGA",
"points": [{"x":83.6498839577511,"y":0},{"x":83.6498839577511,"y":2},{"x":84.1261213470374,"y":2},{"x":84.5261213470374,"y":1},{"x":84.1261213470374,"y":0}]}
,{
"name": "orf00050",
"orfname": "orf00050",
"gene_start": 17843,
"gene_end": 18295,
"gene_strand": "+",
"real_start": 2263441,
"real_end": 2263893 ,
"real_strand": "-",
"name": "orf00050",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     85.5823426325013,
"motifs":    "",
"function":  "tRNA-specific adenosine deaminase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=tadA PE=1 SV=1",
"annotation":"Species='-'<br>match=45.270%|Evalue=4.34e-40<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|Q99W51|TADA_STAAM>sp|Q99W51|TADA_STAAM</a>",
"protein":"MTAPTFATDDIRYMRIALEEARAAADEGEIPIGAVIVCKGQIVARAHNRVERLNDPTAHAEMLAITMAVDAIGGKYLRDCTLYVTVEPCLMCAGALRWTQIPRVVYGASEPKVGYRLFTDHALHPKCHVEGGILADESENLMRSFFAERR",
"dna":"ATGACAGCCCCTACCTTTGCCACGGATGACATCCGCTACATGCGGATCGCGCTCGAAGAGGCACGAGCGGCTGCTGACGAAGGAGAGATTCCTATCGGAGCCGTGATCGTCTGCAAAGGGCAGATCGTTGCGCGTGCTCACAATAGAGTGGAAAGGCTAAACGACCCTACGGCTCATGCCGAGATGCTTGCCATCACGATGGCCGTAGATGCCATAGGGGGGAAATACCTCCGCGACTGCACGCTGTACGTGACTGTCGAACCCTGTCTGATGTGTGCTGGCGCACTTCGCTGGACACAAATACCGCGAGTAGTGTACGGAGCATCCGAACCCAAAGTGGGCTACAGGCTGTTCACCGATCATGCACTCCATCCCAAATGCCACGTAGAAGGCGGTATATTGGCGGACGAATCGGAGAATCTGATGCGTAGTTTCTTTGCCGAACGGCGG",
"points": [{"x":84.511912092076,"y":0},{"x":84.511912092076,"y":2},{"x":86.2527731729266,"y":2},{"x":86.6527731729266,"y":1},{"x":86.2527731729266,"y":0}]}
,{
"name": "orf00052",
"orfname": "orf00052",
"gene_start": 18327,
"gene_end": 19241,
"gene_strand": "+",
"real_start": 2262495,
"real_end": 2263409 ,
"real_strand": "-",
"name": "orf00052",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     88.9688817316345,
"motifs":    "",
"function":  "Ribonuclease Z OS=Porphyromonas gingivalis (strain ATCC BAA-308 / W83) OX=242619 GN=rnz PE=3 SV=2",
"annotation":"Species='-'<br>match=100.000%|Evalue=0.0<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|Q51834|RNZ_PORGI>sp|Q51834|RNZ_PORGI</a>",
"protein":"MAAFSVHILGCGSALPTTHHHPSSQVIDLRDKLYMIDCGEGVQRQFRHEKLHFGRLIHIFISHLHGDHCFGLPGFISTLGLLGRTGTLHVHGPEGIERFLSPILEQFCHRMPYQVEIHTIDASRHALVHEDKSVKVYSIPLSHRIPAVGYLFEEKCRARHLNKAAAEFYNIPLAEYPLIIEGSDYTTPDGRIIPNRHLTTPGTPPRRYAYCSDTEFCPSIVPIIQGVDLLYHEATFMEEDRARAKETFHSTAKEAAEIARQAGAKRLLIGHYSGRYKDVQGLLEEAQSVFKPTIAANERMRIDL",
"dna":"ATGGCAGCATTCAGTGTACATATATTGGGCTGCGGATCTGCCCTGCCAACCACACACCACCATCCCTCTTCGCAAGTAATCGACCTGCGCGACAAACTCTACATGATCGATTGCGGAGAAGGTGTCCAGCGACAATTCAGACACGAAAAGCTCCATTTCGGACGTCTCATTCATATCTTCATCAGCCATCTCCATGGCGATCACTGTTTCGGTCTGCCCGGATTTATCTCCACGCTCGGTCTGCTGGGGCGTACCGGCACCCTGCATGTACATGGGCCGGAGGGAATAGAGCGTTTCCTCAGCCCCATATTGGAGCAGTTCTGTCACCGAATGCCCTATCAGGTGGAGATACATACGATCGATGCCTCCCGACATGCGCTTGTACATGAGGACAAATCCGTCAAAGTCTATAGCATACCGCTCAGCCACCGCATCCCTGCGGTGGGCTACCTTTTCGAAGAGAAATGCCGTGCAAGGCATCTGAACAAAGCGGCTGCCGAGTTCTACAATATTCCGCTTGCCGAATATCCCCTCATCATAGAAGGATCCGATTACACGACACCGGATGGGCGGATCATCCCCAACCGACACCTCACGACCCCGGGTACACCACCCAGACGATATGCTTACTGCTCGGACACGGAGTTTTGTCCCTCCATCGTCCCTATTATTCAAGGTGTGGATTTGCTCTACCATGAAGCTACTTTTATGGAGGAGGATCGGGCAAGAGCCAAAGAGACTTTCCACAGTACAGCCAAAGAAGCCGCCGAAATAGCACGACAGGCAGGAGCAAAACGCCTCCTCATCGGGCATTACTCCGGCAGATACAAGGACGTCCAAGGTTTGCTGGAAGAAGCTCAAAGCGTATTCAAGCCAACTATTGCCGCCAATGAAAGAATGCGCATCGATCTG",
"points": [{"x":86.8043385591815,"y":0},{"x":86.8043385591815,"y":2},{"x":90.7334249040875,"y":2},{"x":91.1334249040875,"y":1},{"x":90.7334249040875,"y":0}]}
,{
"name": "orf00054",
"orfname": "orf00054",
"gene_start": 19264,
"gene_end": 19785,
"gene_strand": "+",
"real_start": 2261951,
"real_end": 2262472 ,
"real_strand": "-",
"name": "orf00054",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     92.4761994979397,
"motifs":    "",
"function":  "Gamma-DL-glutamyl hydrolase OS=Bacillus subtilis (strain 168) OX=224308 GN=pgdS PE=1 SV=2",
"annotation":"Species='-'<br>match=34.091%|Evalue=2.75e-13<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|P96740|PGDS_BACSU>sp|P96740|PGDS_BACSU</a>",
"protein":"LLLTLAGLLYSCGTGKKATNISGKPHDTTTTGHSLRTAEDIVTDLIARGKKLIGKPYRYQGPSSWPMDCSGYVAYLYSCYGIHIPRSSSALYNYTIPIRHPLPGDLLFFRGSKNHKGTIGHVALLIEVCDDELIMLHNTNSRGIIIESLQRSSYFSKRYIRAGRLPEIQALMD",
"dna":"TTGCTCCTTACCCTTGCTGGCCTCCTGTATTCCTGCGGAACAGGCAAAAAAGCGACAAATATATCCGGCAAACCTCACGATACAACTACCACCGGCCATTCGCTCCGAACGGCGGAGGACATCGTTACCGACCTGATAGCCCGAGGCAAGAAACTGATAGGCAAACCCTACAGGTATCAAGGGCCATCGTCTTGGCCGATGGATTGCTCCGGCTACGTGGCCTACCTCTATTCCTGCTACGGTATTCATATCCCACGCTCTTCATCGGCTCTGTACAACTATACCATTCCCATACGCCATCCTCTACCGGGTGATCTGCTTTTCTTCCGTGGTAGCAAGAATCACAAAGGGACTATCGGCCATGTGGCACTGTTGATCGAAGTTTGCGATGACGAACTAATCATGCTACACAACACCAATAGCAGAGGTATTATCATCGAATCACTGCAACGAAGTTCGTACTTCAGCAAGCGTTACATCCGTGCCGGTCGTTTGCCTGAGATCCAAGCTCTCATGGAC",
"points": [{"x":91.2423625254582,"y":0},{"x":91.2423625254582,"y":2},{"x":93.3100364704211,"y":2},{"x":93.7100364704211,"y":1},{"x":93.3100364704211,"y":0}]}
,{
"name": "sORF_14",
"orfname": "sORF_14",
"gene_start": 19975,
"gene_end": 20070,
"gene_strand": "-",
"real_start": 2261666,
"real_end": 2261761 ,
"real_strand": "+",
"name": "sORF_14",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     94.8349358215318,
"motifs":    "RBS=TTTGTAAGGACGACCTAT<br>",
"function":  "",
"annotation":"",
"protein":"LLRKVDLNARLGRPDFLSVSTYAVYSLVVCGx",
"dna":"TTGCTCCGTAAGGTCGACCTAAACGCTCGGTTAGGTCGACCTGACTTTCTGTCAGTGTCGACGTATGCGGTTTATTCCCTCGTAGTATGCGGATAA",
"points": [{"x":94.6099559513096,"y":1},{"x":95.0099559513096,"y":2},{"x":95.0599156917539,"y":2},{"x":95.0599156917539,"y":0},{"x":95.0099559513096,"y":0}]}
,{
"name": "sORF_7",
"orfname": "sORF_7",
"gene_start": 20148,
"gene_end": 20261,
"gene_strand": "+",
"real_start": 2261475,
"real_end": 2261588 ,
"real_strand": "-",
"name": "sORF_7",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     95.6969639558566,
"motifs":    "RBS=CGGAGCGGTACGTCGTCC<br>",
"function":  "",
"annotation":"",
"protein":"LLNERNAIGVSPFPVNETFARQLPCKGPGQPHQNVSTx",
"dna":"TTGCTAAACGAGAGAAATGCGATCGGCGTTTCTCCGTTTCCCGTTAATGAGACCTTTGCACGGCAATTGCCGTGCAAAGGTCCAGGGCAACCGCATCAAAATGTAAGTACCTGA",
"points": [{"x":95.4293563207502,"y":0},{"x":95.4293563207502,"y":2},{"x":95.5645715909629,"y":2},{"x":95.9645715909629,"y":1},{"x":95.5645715909629,"y":0}]}
,{
"name": "sORF_13",
"orfname": "sORF_13",
"gene_start": 20151,
"gene_end": 20246,
"gene_strand": "-",
"real_start": 2261490,
"real_end": 2261585 ,
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"protein":"LMRLPWTFARQLPCKGLINGKRRNADRISLVx",
"dna":"TTGATGCGGTTGCCCTGGACCTTTGCACGGCAATTGCCGTGCAAAGGTCTCATTAACGGGAAACGGAGAAACGCCGATCGCATTTCTCTCGTTTAG",
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,{
"name": "sORF_8",
"orfname": "sORF_8",
"gene_start": 20324,
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"gene_strand": "+",
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"real_strand": "-",
"name": "sORF_8",
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"motifs":    "RBS=TCTCCAAAATGCAATCAT<br>",
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"protein":"LKISNLYFLEIFDAVALCKGLMCGSSVILCDGx",
"dna":"TTGAAAATTAGCAACTTGTATTTTCTCGAAATTTTTGATGCGGTTGCCCTGTGCAAAGGTCTCATGTGTGGCTCATCCGTGATTTTGTGTGATGGCTGA",
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,{
"name": "sORF_12",
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"name": "sORF_12",
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"protein":"MSHRRALRPFVLLLSLYSWSALDREALASLQFAISHHTKSRMSHTx",
"dna":"ATGTCCCATAGAAGAGCATTGCGCCCCTTCGTCCTATTGCTCTCGCTGTACTCATGGTCAGCCCTAGATAGAGAGGCTTTAGCTTCGCTGCAATTCGCCATCAGCCATCACACAAAATCACGGATGAGCCACACATGA",
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,{
"name": "sORF_9",
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"name": "sORF_9",
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"annotation":"",
"protein":"MANCSEAKASLSRADHEYSESNRTKGRNALLWDIRAFLLPKPMETNx",
"dna":"ATGGCGAATTGCAGCGAAGCTAAAGCCTCTCTATCTAGGGCTGACCATGAGTACAGCGAGAGCAATAGGACGAAGGGGCGCAATGCTCTTCTATGGGACATTCGTGCTTTCCTACTCCCAAAGCCTATGGAGACCAACTGA",
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,{
"name": "sORF_10",
"orfname": "sORF_10",
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"gene_strand": "+",
"real_start": 2261104,
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"real_strand": "-",
"name": "sORF_10",
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"yline":     10,
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"xtext":     97.418652015346,
"motifs":    "RBS=ATAGGACGAAGGGGCGCA<br>",
"function":  "",
"annotation":"",
"protein":"MLFYGTFVLSYSQSLWRPTDNPIRRGVTLNGLMDCKQFIHKSx",
"dna":"ATGCTCTTCTATGGGACATTCGTGCTTTCCTACTCCCAAAGCCTATGGAGACCAACTGATAACCCGATAAGAAGAGGTGTGACTCTAAATGGTCTCATGGATTGTAAGCAGTTTATACACAAATCGTAA",
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,{
"name": "sORF_11",
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"name": "sORF_11",
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"function":  "",
"annotation":"",
"protein":"LCINCLQSMRPFRVTPLLIGLSVGLHRLWEx",
"dna":"TTGTGTATAAACTGCTTACAATCCATGAGACCATTTAGAGTCACACCTCTTCTTATCGGGTTATCAGTTGGTCTCCATAGGCTTTGGGAGTAG",
"points": [{"x":97.2528773741297,"y":1},{"x":97.6528773741297,"y":2},{"x":97.6886278596126,"y":2},{"x":97.6886278596126,"y":0},{"x":97.6528773741297,"y":0}]}
,{
"name": "orf00059",
"orfname": "orf00059",
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"real_strand": "+",
"name": "orf00059",
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"yline":     10,
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"xtext":     98.8751006488893,
"motifs":    "",
"function":  "Uncharacterized tRNA/rRNA methyltransferase YsgA OS=Bacillus subtilis (strain 168) OX=224308 GN=ysgA PE=3 SV=2",
"annotation":"Species='-'<br>match=36.806%|Evalue=2.18e-20<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|P94538|YSGA_BACSU>sp|P94538|YSGA_BACSU</a>",
"protein":"VQDPGNVGTILRTADWFGIRHVLLGTGSADVFSPKVVQASMGALARIQPTPLKNTVDTLAYFRRQGIPVYGAFLEGQSLYEAPLPNFTEPAILVLGSEGHGISPEVAAEITDRLTIPASGLSVKGHTESLNVAIAAAILCSEWRRRS",
"dna":"GTGCAAGATCCGGGCAACGTGGGGACCATCCTACGAACAGCCGACTGGTTCGGTATCCGTCATGTGTTGCTGGGGACAGGTTCAGCCGATGTCTTTTCTCCCAAAGTCGTACAGGCCTCTATGGGAGCATTGGCACGAATACAGCCGACTCCCCTTAAGAACACGGTCGATACACTGGCTTATTTTCGTCGGCAGGGAATACCCGTTTACGGAGCTTTTCTGGAGGGACAAAGCCTATACGAAGCCCCCTTGCCGAACTTTACCGAACCTGCCATACTCGTCTTGGGCAGTGAGGGGCACGGCATCAGTCCCGAAGTTGCGGCGGAGATTACCGACAGACTTACGATACCGGCTTCCGGTTTGTCGGTGAAAGGGCATACCGAATCGCTCAATGTTGCTATTGCCGCAGCCATTTTGTGCTCCGAATGGAGGCGTCGCAGC",
"points": [{"x":97.8259839909061,"y":1},{"x":98.2259839909061,"y":2},{"x":99.9242173068725,"y":2},{"x":99.9242173068725,"y":0},{"x":98.2259839909061,"y":0}]}
]}
