{
"AOIs": [ 
{
"name": "NZ_SOML010000141.219.AOI_01",
"filename": "/data/pg-molgen/USERS/Vicky/Genomes_Bacteroidales/Dysgonomonadaceae/GCF_000213555.1_Dysg_gade_ATCC_V1_genomic.fna",
"color": "gray",
"yline": 10,
"xstart": 5,
"points": [ {"x":0,"y":10}, {"x":800,"y":10} ]
}
],
"Genes": [
{
"name": "orf00001",
"orfname": "orf00001",
"gene_start": 21,
"gene_end": 305,
"gene_strand": "+",
"real_start": 93232,
"real_end": 93516 ,
"real_strand": "-",
"name": "orf00001",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     1.41456217998785,
"motifs":    "",
"function":  "Signal recognition particle protein OS=Bacillus subtilis (strain 168) OX=224308 GN=ffh PE=1 SV=1",
"annotation":"Species='-'<br>match=54.255%|Evalue=1.07e-25<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|P37105|SRP54_BACSU>sp|P37105|SRP54_BACSU</a>",
"protein":"MIPGVGKAMKDIDIDDNAFKSIEAIIYSMTPQERTSPELLNGSRRQRIAKGSGTSIQEVNKLIKQFDETRKMMKMMTQMKGAGKLMSKMPGMRR",
"dna":"ATGATACCCGGTGTCGGCAAAGCAATGAAAGATATAGATATAGACGACAATGCTTTCAAAAGTATCGAGGCCATTATCTACTCGATGACTCCACAAGAGCGTACAAGTCCTGAGTTACTGAACGGCAGCCGCCGTCAACGTATAGCAAAAGGAAGCGGCACTTCGATACAGGAAGTGAACAAATTGATCAAGCAATTTGACGAAACCCGCAAAATGATGAAAATGATGACTCAAATGAAAGGCGCAGGCAAACTGATGTCAAAAATGCCGGGAATGAGAAGA",
"points": [{"x":0.182244207237699,"y":0},{"x":0.182244207237699,"y":2},{"x":2.246880152738,"y":2},{"x":2.646880152738,"y":1},{"x":2.246880152738,"y":0}]}
,{
"name": "orf00002",
"orfname": "orf00002",
"gene_start": 399,
"gene_end": 1280,
"gene_strand": "+",
"real_start": 92257,
"real_end": 93138 ,
"real_strand": "-",
"name": "orf00002",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     7.28542914171657,
"motifs":    "",
"function":  "Bifunctional protein FolD OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / CIP 104284 / JCM 5825 / NCTC 11152) OX=435591 GN=folD PE=3 SV=1",
"annotation":"Species='-'<br>match=82.818%|Evalue=3.17e-178<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|A6L8J2|FOLD_PARD8>sp|A6L8J2|FOLD_PARD8</a>",
"protein":"MILIDGKAVSAQMKQEIAAEVKQIVEQGGKRPHLAAVLVGHDGGSETYVANKVKTCEEVGFKSTLIRYESDATEDEILACVDRLNNDTDVDGFIVQLPLPKHISEQKVIEAIDYRKDVDGFHPINVGRMSIGLPCFVSATPAGILELLKRYEIPTAGKNCVVLGRSNIVGKPVANLMMQKGYPGDATVTVCHSRTPNIKEICLQADIIIAALGVPEFLKGDMVKDGATIIDVGTTRVPSTETKSGFKLKGDVAFDEVAKKAGHITPVPGGVGPMTIISLMGNTLLAGKKAIYK",
"dna":"ATGATTTTAATAGACGGAAAAGCAGTATCTGCCCAAATGAAACAGGAAATAGCGGCAGAAGTAAAACAAATAGTAGAACAGGGAGGAAAACGCCCTCATTTGGCCGCAGTATTGGTTGGTCATGACGGAGGAAGCGAAACCTATGTTGCCAATAAAGTAAAAACCTGTGAAGAAGTAGGATTCAAATCGACTCTTATCAGATACGAAAGCGATGCAACCGAAGATGAGATTCTGGCTTGTGTAGACCGTCTGAACAACGATACTGATGTTGACGGGTTTATTGTTCAATTACCTCTGCCCAAACATATATCCGAACAAAAAGTAATTGAAGCCATCGACTATCGAAAAGATGTAGATGGTTTTCACCCTATCAACGTAGGACGTATGTCTATCGGGCTGCCCTGCTTTGTATCGGCAACTCCCGCCGGTATATTGGAACTGTTGAAACGTTATGAAATACCCACAGCGGGTAAAAACTGTGTTGTACTAGGCAGAAGTAATATAGTAGGCAAACCTGTTGCTAATCTGATGATGCAGAAAGGTTATCCCGGAGACGCAACAGTAACTGTTTGCCACAGCCGCACTCCTAATATTAAAGAAATATGCCTGCAAGCGGATATTATTATCGCAGCATTGGGTGTACCCGAATTTCTGAAAGGTGATATGGTAAAAGATGGTGCTACCATTATTGATGTCGGTACAACCCGTGTACCTTCAACAGAAACCAAATCGGGTTTTAAATTAAAAGGTGATGTAGCTTTCGATGAAGTCGCAAAAAAAGCAGGTCATATTACTCCTGTTCCCGGAGGTGTGGGACCGATGACTATTATCTCGCTTATGGGAAATACTCTTTTAGCAGGAAAAAAGGCCATATACAAA",
"points": [{"x":3.46263993751627,"y":0},{"x":3.46263993751627,"y":2},{"x":10.7082183459169,"y":2},{"x":11.1082183459169,"y":1},{"x":10.7082183459169,"y":0}]}
,{
"name": "orf00003",
"orfname": "orf00003",
"gene_start": 1347,
"gene_end": 2102,
"gene_strand": "-",
"real_start": 91435,
"real_end": 92190 ,
"real_strand": "+",
"name": "orf00003",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     14.9657207324481,
"motifs":    "",
"function":  "1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Helicobacter pylori (strain ATCC 700392 / 26695) OX=85962 GN=plsC PE=3 SV=1",
"annotation":"Species='-'<br>match=32.402%|Evalue=1.45e-10<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|O25903|PLSC_HELPY>sp|O25903|PLSC_HELPY</a>",
"protein":"VTSITIKPMRKIISYPLSVIYYLLFGLTLVIFHVIQWLSFNLFGYDAHKKSVDVLCFFLVFNTYVLGTRYKIEGIENLLANEPLIIASNHQSLYDITTIGWFLRKIHPKFVSKIELGKGIPSISYNLNHGGSVLIDRKDAKQSLSAIRKLGEYIEENKRAAVIFPEGTRSVTGKPGKFAENGLKILCKYAPSAYMVPVTINNAWKMTRWGVFPLGAGNTIILTVHKPIAVNSMPFSEVFEKTEHAVVSRII",
"dna":"GTGACATCTATAACTATAAAACCAATGCGAAAAATCATCTCATATCCTCTTTCTGTAATTTATTACCTGCTTTTTGGCTTGACTCTTGTTATTTTCCATGTTATACAATGGCTGAGTTTCAATTTATTCGGATACGATGCCCATAAGAAAAGTGTAGATGTATTGTGTTTTTTCTTGGTATTTAATACATACGTTCTGGGAACCCGATATAAAATAGAGGGGATTGAGAATCTTCTGGCAAATGAACCCTTGATAATTGCATCTAATCATCAGAGTTTGTATGATATAACTACGATCGGATGGTTTCTGAGAAAAATACATCCCAAATTTGTAAGCAAGATAGAGTTAGGAAAAGGTATTCCCAGCATTTCATATAATCTTAATCATGGAGGTTCGGTACTTATCGACCGAAAAGACGCTAAACAGTCGTTGTCTGCTATCAGAAAATTAGGAGAATATATTGAGGAGAATAAACGTGCAGCGGTAATATTTCCTGAAGGAACAAGAAGTGTAACCGGAAAACCCGGGAAGTTTGCAGAGAACGGTTTGAAAATACTTTGTAAATATGCTCCGTCTGCTTATATGGTTCCCGTAACAATTAATAATGCATGGAAAATGACTCGATGGGGTGTATTTCCTCTTGGAGCCGGAAATACCATTATATTGACTGTTCACAAACCGATTGCAGTGAATAGTATGCCTTTTTCTGAAGTTTTTGAGAAAACAGAGCATGCTGTTGTAAGCCGGATTATT",
"points": [{"x":11.6896641499609,"y":1},{"x":12.0896641499609,"y":2},{"x":18.2417773149353,"y":2},{"x":18.2417773149353,"y":0},{"x":12.0896641499609,"y":0}]}
,{
"name": "sORF_3",
"orfname": "sORF_3",
"gene_start": 2162,
"gene_end": 2260,
"gene_strand": "-",
"real_start": 91277,
"real_end": 91375 ,
"real_strand": "+",
"name": "sORF_3",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     19.1877115334548,
"motifs":    "RBS=GTGTTAGTTTGGGATTGA<br>",
"function":  "",
"annotation":"",
"protein":"LFLIRMKMIVFVLLSLDGVRLISVLLLLLGFIx",
"dna":"TTGTTCCTTATTAGAATGAAAATGATTGTATTTGTTCTTTTGTCGCTTGATGGGGTTAGGCTGATATCAGTATTATTGCTACTTTTAGGTTTTATTTAA",
"points": [{"x":18.7624750499002,"y":1},{"x":19.1624750499002,"y":2},{"x":19.6129480170095,"y":2},{"x":19.6129480170095,"y":0},{"x":19.1624750499002,"y":0}]}
,{
"name": "orf00005",
"orfname": "orf00005",
"gene_start": 2435,
"gene_end": 3505,
"gene_strand": "+",
"real_start": 90032,
"real_end": 91102 ,
"real_strand": "-",
"name": "orf00005",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     25.7745378807602,
"motifs":    "",
"function":  "Probable nitronate monooxygenase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41) OX=342451 GN=SSP1854 PE=3 SV=1",
"annotation":"Species='-'<br>match=26.197%|Evalue=1.05e-19<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|Q49W60|NMO_STAS1>sp|Q49W60|NMO_STAS1</a>",
"protein":"MKSFFIGNMEVKLPVIQGGMGVGVSLSKLASAVANEGGIGVISCAGLGLIYSKQPGNYLSRCISGLKEEIRKAKEKTNGIIGVNIMVALTNYADMVKTSISEKVDVIFAGAGLPFDLPSYLTKESTTKLVPIVSSSRAAKILCDKWKNNYNYLPDAIVIEGPKAGGHLGFKTEQIDDEHFSLEQIIPEVLNITTQYKEEKDIPVIVAGGISSGKDIHHFLDMGVSGVQMGTIFVTTEECDASTEFKNVFVNAKQEDIKIIQSPVGMPGRAIDGEFIRSVEKGQEVPKSCPFHCIKTCDYSKSPYCIVQALYQAAKGNMKKGYAFTGINVHLSQKISSVKEVIERLKSEFRGAQLEA",
"dna":"ATGAAATCATTTTTTATCGGAAATATGGAAGTAAAACTTCCTGTCATTCAAGGAGGAATGGGTGTTGGGGTTTCTTTATCCAAATTAGCATCGGCAGTAGCCAATGAAGGAGGTATCGGAGTTATATCGTGTGCAGGCTTAGGGTTGATATACAGCAAACAGCCGGGCAACTACCTTAGCCGATGTATCTCTGGATTGAAAGAAGAAATACGCAAGGCTAAAGAAAAAACCAATGGCATAATAGGAGTAAACATCATGGTGGCACTTACCAATTATGCTGATATGGTAAAAACATCAATTTCAGAAAAAGTAGATGTGATTTTTGCAGGAGCCGGACTGCCGTTCGATCTGCCGTCTTATCTGACCAAAGAAAGCACCACAAAATTAGTCCCGATTGTATCTTCATCGAGAGCTGCTAAGATACTATGCGATAAATGGAAAAACAACTACAATTATCTTCCCGACGCTATCGTCATAGAGGGACCCAAAGCGGGAGGACATCTGGGTTTTAAAACAGAACAAATAGACGATGAACATTTCTCTCTCGAACAAATCATACCTGAAGTCTTAAATATCACTACTCAATACAAAGAGGAAAAGGACATACCAGTAATAGTAGCGGGAGGTATCTCTTCGGGTAAAGATATACACCATTTTTTGGATATGGGAGTTTCAGGAGTTCAAATGGGAACAATATTTGTCACTACGGAAGAGTGTGATGCATCAACCGAATTCAAAAATGTATTCGTTAATGCTAAACAAGAAGATATAAAAATAATACAAAGCCCTGTGGGAATGCCCGGACGGGCTATTGACGGAGAATTTATCCGAAGTGTGGAGAAAGGACAGGAAGTGCCCAAAAGTTGTCCATTTCATTGTATCAAGACATGCGACTATAGTAAAAGCCCTTACTGTATCGTACAAGCTCTTTATCAGGCAGCAAAAGGAAATATGAAAAAAGGATATGCCTTCACAGGAATCAATGTTCACCTTTCTCAAAAAATTTCGAGTGTGAAAGAAGTTATCGAAAGGCTGAAATCTGAATTCAGAGGAGCTCAATTAGAAGCA",
"points": [{"x":21.1316497439903,"y":0},{"x":21.1316497439903,"y":2},{"x":30.0174260175302,"y":2},{"x":30.4174260175302,"y":1},{"x":30.0174260175302,"y":0}]}
,{
"name": "sORF_1",
"orfname": "sORF_1",
"gene_start": 3510,
"gene_end": 3605,
"gene_strand": "+",
"real_start": 89932,
"real_end": 90027 ,
"real_strand": "-",
"name": "sORF_1",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     30.8730365356244,
"motifs":    "RBS=AATTAGAAGCATAAGTCC<br>",
"function":  "",
"annotation":"",
"protein":"MSTQLTFNLSFFDRLNVFYYKYIVWGLSNHLx",
"dna":"ATGTCGACTCAGTTAACGTTCAATCTTTCATTTTTTGATAGATTGAACGTTTTTTATTATAAATATATAGTTTGGGGGCTATCAAATCACCTATAA",
"points": [{"x":30.4608174954439,"y":0},{"x":30.4608174954439,"y":2},{"x":30.8852555758049,"y":2},{"x":31.2852555758049,"y":1},{"x":30.8852555758049,"y":0}]}
,{
"name": "orf00006",
"orfname": "orf00006",
"gene_start": 3840,
"gene_end": 3968,
"gene_strand": "-",
"real_start": 89569,
"real_end": 89697 ,
"real_strand": "+",
"name": "orf00006",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     33.8800659550464,
"motifs":    "",
"function":  "",
"annotation":"",
"protein":"LLCLIKPEKSIRPFSRSAKIIHKPKSGKYQAVYKGFMYFISV",
"dna":"TTGTTATGCTTGATAAAACCTGAAAAAAGTATCAGACCTTTTTCAAGAAGTGCAAAGATAATACATAAACCGAAGAGTGGAAAATATCAGGCAGTTTATAAAGGATTTATGTACTTTATATCCGTA",
"points": [{"x":33.3246550377506,"y":1},{"x":33.7246550377506,"y":2},{"x":34.4354768723423,"y":2},{"x":34.4354768723423,"y":0},{"x":33.7246550377506,"y":0}]}
,{
"name": "orf00007",
"orfname": "orf00007",
"gene_start": 3979,
"gene_end": 5577,
"gene_strand": "+",
"real_start": 87960,
"real_end": 89558 ,
"real_strand": "-",
"name": "orf00007",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     41.4648962943678,
"motifs":    "",
"function":  "Peptide chain release factor 3 OS=Syntrophus aciditrophicus (strain SB) OX=56780 GN=prfC PE=3 SV=1",
"annotation":"Species='-'<br>match=52.783%|Evalue=0.0<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|Q2LWC5|RF3_SYNAS>sp|Q2LWC5|RF3_SYNAS</a>",
"protein":"VTLSKYMSELDKEIHRRRTFAIISHPDAGKTTLTEKLLLFGGAIHVAGAVKSNKIKKTATSDWMEIEKQRGISVATSVMGFEYDGYKINILDTPGHQDFAEDTFRTLTAVDSVIIAVDVAKGVETQTRKLMEVCRMRKTPVMIFVNKMDRDGKDPFDLLDELEEELKIKVRPLSWPIDSGQSFRGVYNLYQEKLDLYTPSKQTVTESIEFKDINSPELERHIGDSLAAKLREDIELIEGVYPELDIDTYLQGEVAPVFFGSALNNFGVKELLDCFVKIAPSPRPIEAVERVVKPEEEAFTGFIFKIHANMDPNHRSCIAFVKICSGKFERNVNYKHVRFNRQMRFSSPTAFMAQKKETVDEAFAGDIVGLPDTGNFKIGDTLTSGEELHFKGLPSFSPEMFKYIENADPMKTKQLQKGIDQLMDEGVAQLFVNQFNGRKIIGTVGQLQFEVIQYRLLHEYGAQCKWEPINLFKACWIESDNEDELENFKKRKSQYMAKDKEGRDVFLADSNYVLMMAQQDFKDIRFHFTSEF",
"dna":"GTGACCTTAAGTAAATATATGAGCGAGTTAGACAAAGAAATTCATAGACGACGTACATTTGCGATTATCAGCCATCCCGATGCGGGTAAAACTACCTTAACAGAAAAGCTTCTGCTATTCGGGGGTGCAATCCACGTAGCCGGGGCTGTAAAATCGAATAAGATAAAAAAAACAGCCACATCCGACTGGATGGAAATAGAAAAGCAACGTGGTATATCGGTTGCAACATCTGTGATGGGCTTTGAATACGATGGCTATAAAATCAACATTCTGGATACACCCGGTCACCAGGATTTCGCAGAAGACACTTTCCGTACACTCACAGCTGTAGATAGTGTTATCATAGCAGTAGACGTCGCCAAAGGGGTTGAAACGCAAACCCGAAAACTAATGGAAGTCTGCCGCATGCGGAAAACTCCGGTGATGATCTTTGTCAATAAGATGGACAGGGACGGAAAAGATCCTTTCGATTTATTAGACGAACTCGAAGAAGAACTAAAAATAAAAGTACGTCCTCTGAGTTGGCCTATCGACAGCGGACAAAGCTTCAGAGGTGTATATAACTTATATCAGGAAAAGCTTGACCTATATACACCAAGTAAACAGACCGTTACTGAATCTATCGAATTTAAGGACATAAACAGTCCCGAACTCGAAAGACATATCGGAGACTCGCTTGCTGCAAAATTAAGAGAAGACATCGAACTGATAGAGGGAGTATATCCCGAACTCGATATAGACACCTATCTGCAAGGAGAAGTAGCTCCCGTATTTTTCGGATCAGCGCTGAATAACTTCGGGGTAAAGGAGCTTTTGGACTGTTTTGTAAAAATCGCCCCCTCTCCCCGCCCTATCGAGGCTGTAGAACGTGTAGTGAAACCCGAAGAAGAAGCATTTACAGGCTTTATATTTAAAATACATGCCAATATGGATCCAAACCATCGCTCATGTATTGCATTCGTAAAAATATGCTCAGGTAAATTTGAACGTAATGTCAATTACAAGCATGTAAGATTTAACCGTCAGATGCGATTCTCTTCACCAACGGCATTTATGGCTCAGAAAAAAGAGACTGTGGATGAAGCTTTCGCCGGAGATATTGTCGGATTACCTGATACCGGTAATTTCAAGATCGGAGATACTCTTACATCAGGCGAAGAGCTGCATTTCAAAGGGCTGCCAAGCTTCTCTCCCGAAATGTTTAAATACATAGAGAATGCAGATCCTATGAAAACAAAACAGTTGCAAAAAGGTATTGACCAGTTGATGGACGAAGGAGTTGCTCAGCTATTTGTAAACCAGTTTAACGGACGAAAGATCATCGGAACCGTTGGACAGCTTCAATTCGAAGTTATACAATACCGCCTGCTCCACGAATATGGAGCCCAATGTAAATGGGAACCTATCAATCTGTTCAAAGCATGCTGGATAGAAAGCGACAATGAAGATGAATTAGAGAACTTCAAAAAACGGAAATCCCAATACATGGCAAAAGACAAGGAAGGGCGAGATGTATTTCTTGCCGACTCAAACTATGTATTGATGATGGCTCAACAAGATTTTAAAGATATACGTTTCCACTTTACATCCGAATTT",
"points": [{"x":34.5309381237525,"y":0},{"x":34.5309381237525,"y":2},{"x":47.9988544649831,"y":2},{"x":48.3988544649831,"y":1},{"x":47.9988544649831,"y":0}]}
,{
"name": "orf00008",
"orfname": "orf00008",
"gene_start": 5574,
"gene_end": 6326,
"gene_strand": "+",
"real_start": 87211,
"real_end": 87963 ,
"real_strand": "-",
"name": "orf00008",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     51.6358587173479,
"motifs":    "",
"function":  "3-deoxy-D-manno-octulosonic acid kinase OS=Xanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85) OX=291331 GN=kdkA PE=3 SV=1",
"annotation":"Species='-'<br>match=22.000%|Evalue=2.01e-05<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|Q5H410|KDKA_XANOR>sp|Q5H410|KDKA_XANOR</a>",
"protein":"LRTRLIINPAYQELEDFIRNLPETFDFTGETIYDGRNTIKIIDTKSIRVNVKSFQKPNIINKFVYGNFRKSKAQRSFEYANILIKNKIDTPTPIGYMELRSGLSFGQSYYISVQEDFDGIMREFQRGTLAGRENLLQQFAQFTADMHEKQILHMDYSPGNILYKKSGESFRFYLVDLNRMFFGQISKEKGCQNFCRLWGNEEMISYIASEYAKTRDFDIKTCIELTLSYHREFWTKFSSRHPGKKPYIED",
"dna":"TTGAGAACTAGACTAATCATAAACCCTGCATATCAAGAGCTGGAAGATTTTATCCGAAATCTTCCGGAGACTTTTGATTTTACAGGAGAGACCATATATGATGGACGCAACACGATAAAAATAATAGACACTAAGAGCATTAGAGTAAACGTAAAATCATTTCAGAAACCCAATATTATAAATAAATTTGTATATGGGAATTTTAGAAAATCCAAAGCTCAGAGATCATTTGAATACGCTAACATACTAATAAAAAACAAAATAGACACACCTACTCCAATCGGATATATGGAGTTGAGATCGGGACTAAGTTTTGGACAAAGTTATTATATTTCAGTACAAGAAGATTTTGATGGCATCATGCGGGAGTTCCAACGTGGAACTTTAGCCGGCAGAGAAAACCTGTTGCAGCAGTTTGCTCAGTTCACGGCAGATATGCACGAAAAGCAAATCCTGCATATGGATTATTCTCCGGGGAACATACTCTACAAAAAATCGGGTGAAAGTTTCAGGTTTTATCTGGTAGATTTGAACAGAATGTTTTTCGGTCAAATTTCAAAAGAAAAAGGCTGCCAGAACTTCTGCCGTCTGTGGGGAAATGAAGAAATGATAAGCTACATTGCATCTGAATATGCTAAGACCAGAGACTTTGATATAAAAACATGCATAGAACTTACATTATCTTATCATCGCGAATTTTGGACTAAATTTTCATCACGACATCCAGGAAAAAAGCCTTACATAGAAGAT",
"points": [{"x":48.3728195782348,"y":0},{"x":48.3728195782348,"y":2},{"x":54.498897856461,"y":2},{"x":54.898897856461,"y":1},{"x":54.498897856461,"y":0}]}
,{
"name": "sORF_2",
"orfname": "sORF_2",
"gene_start": 6356,
"gene_end": 6463,
"gene_strand": "-",
"real_start": 87074,
"real_end": 87181 ,
"real_strand": "+",
"name": "sORF_2",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     55.6235355376204,
"motifs":    "RBS=ATAAGTGGTTGTATATGA<br>",
"function":  "",
"annotation":"",
"protein":"VFYVLLKCCKILSFAKRYIREMNSLLFSYKLFVDYx",
"dna":"GTGTTCTATGTTTTGTTGAAATGTTGTAAAATACTTTCTTTTGCTAAAAGATATATAAGAGAGATGAATTCCTTACTGTTTAGTTATAAGTTGTTTGTAGATTATTGA",
"points": [{"x":55.1592467239434,"y":1},{"x":55.5592467239434,"y":2},{"x":56.0878243512974,"y":2},{"x":56.0878243512974,"y":0},{"x":55.5592467239434,"y":0}]}
,{
"name": "orf00009",
"orfname": "orf00009",
"gene_start": 6575,
"gene_end": 7627,
"gene_strand": "+",
"real_start": 85910,
"real_end": 86962 ,
"real_strand": "-",
"name": "orf00009",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     61.6245769330903,
"motifs":    "",
"function":  "Lipopolysaccharide core heptosyltransferase RfaQ OS=Escherichia coli OX=562 GN=rfaQ PE=1 SV=1",
"annotation":"Species='-'<br>match=20.875%|Evalue=1.59e-12<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|Q9R9D5|RFAQ_ECOLX>sp|Q9R9D5|RFAQ_ECOLX</a>",
"protein":"MQIKKVLVIRFRRVGDATLSSVICTSLRKSFPEAEIHYVLNESIAPLFKYHPDIDKLITFSNDDMSSLFKYIKKVYSIVKGQRYDIIIDTRSTLKTMFFSLFSPRTQFRIGRKKFYNPIIHNYRVNNKFDGIRDNTQLSLALLDPLNRDYSIEKTPLFKLYYTSEEYQQYREYMASKGIDFSKPIIVCAVTARLEYKVWDKDKMKAILERIISKYDAQLIFNFGDNKEKESSKHLQTLMNNDPHIFTDIEAKNLRELIALLANSNFFFGNEGGARHISQALDVPSFAIYPPDIPLDNWLPNKSERFQGIELKDIVHDIAIYETLSYNDKFALIDVDSVWNVTDKMLEKYL",
"dna":"ATGCAAATAAAAAAAGTTTTAGTGATCCGTTTTAGACGAGTTGGCGATGCAACACTATCATCTGTTATATGCACTTCACTAAGAAAATCTTTTCCTGAAGCCGAAATTCATTATGTTTTAAATGAAAGTATAGCTCCCCTTTTCAAATATCACCCGGATATAGACAAGCTGATTACTTTCAGCAATGATGATATGTCTTCATTATTTAAATATATCAAAAAAGTTTATTCTATTGTAAAGGGGCAGCGGTATGATATAATTATAGATACCAGATCAACCCTTAAAACGATGTTCTTCTCTCTTTTTTCGCCAAGAACTCAGTTTAGAATAGGACGAAAGAAATTTTATAACCCCATAATACATAACTATCGGGTAAATAATAAATTTGATGGTATACGCGACAATACGCAACTCTCTCTTGCATTACTTGATCCACTAAATAGGGACTACAGTATAGAGAAAACGCCTCTGTTCAAACTTTACTATACTTCCGAAGAATACCAGCAATACAGAGAATATATGGCAAGCAAAGGCATTGACTTTTCAAAACCCATTATTGTTTGTGCTGTTACTGCCCGATTAGAATACAAAGTGTGGGACAAAGATAAAATGAAAGCCATACTGGAACGCATTATCAGCAAATATGATGCTCAGCTGATTTTTAATTTTGGTGATAACAAGGAAAAGGAATCATCTAAGCATCTACAAACTTTAATGAATAATGATCCCCATATATTTACCGATATAGAAGCTAAAAACCTCAGAGAACTGATAGCATTACTCGCCAACAGTAACTTCTTCTTTGGGAATGAAGGTGGCGCAAGACATATTTCTCAGGCTCTGGATGTACCTTCTTTTGCAATATATCCTCCTGATATACCTCTCGACAACTGGTTACCAAATAAATCGGAACGCTTTCAGGGCATCGAGTTAAAAGATATCGTACATGATATCGCCATCTATGAAACACTTTCTTATAACGATAAGTTTGCATTAATTGATGTAGATTCGGTATGGAATGTAACTGATAAAATGCTGGAAAAATATCTT",
"points": [{"x":57.0597934565651,"y":0},{"x":57.0597934565651,"y":2},{"x":65.7893604096155,"y":2},{"x":66.1893604096155,"y":1},{"x":65.7893604096155,"y":0}]}
,{
"name": "orf00011",
"orfname": "orf00011",
"gene_start": 7666,
"gene_end": 8724,
"gene_strand": "+",
"real_start": 84813,
"real_end": 85871 ,
"real_strand": "-",
"name": "orf00011",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     71.1186323006162,
"motifs":    "",
"function":  "Uncharacterized glycosyltransferase MJ1607 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ1607 PE=3 SV=1",
"annotation":"Species='-'<br>match=26.562%|Evalue=5.01e-07<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|Q59002|Y1607_METJA>sp|Q59002|Y1607_METJA</a>",
"protein":"MKKKTILIDLRYLGIAHGFGELCGYYGNYIKEHADEINDLDITLLVPKSFVGKFGDYVKYLTIRRIYKILPILLPKFDIWHNTTQQAKYSSTNPTTKKILSIHDLNFIYEKSDSKANKRLKKLQQYINSAQVITFISQFTKQEVKKHLDISSKETLVNYVGIKDIRFENTTVPQFLINKDKKFLFTISRINKKKNFHVLLDTMKRLPQYDLYICGNFDSEYAQEMIRRIKEESITNIIMPGEISFSEKIWMYKNCHAFLFPSLFEGFGMPVIEAMQFGKPVFSSRCTSLPEIGSIHSYFFKDFTPEHMSSFINENIESFYLDTNKIQQQIEYSLSYTLDRHMNKYLELYRNI",
"dna":"ATGAAAAAAAAAACGATATTAATCGACTTGAGATACTTAGGTATAGCACATGGTTTTGGTGAACTCTGCGGATACTACGGGAACTACATTAAAGAGCATGCAGATGAAATCAACGATTTAGATATAACATTACTTGTTCCTAAAAGCTTTGTCGGAAAATTTGGAGATTATGTCAAATATCTAACAATAAGACGAATATATAAAATACTACCTATTTTATTACCTAAATTTGACATCTGGCATAATACCACGCAACAAGCTAAATACTCATCGACTAATCCAACAACGAAAAAAATATTATCAATACACGATCTTAACTTTATATATGAAAAGTCTGATTCTAAAGCTAATAAAAGATTAAAAAAATTACAGCAATATATTAACTCTGCCCAAGTTATCACTTTTATTTCTCAATTTACAAAACAGGAGGTAAAAAAACATTTAGATATAAGCTCTAAAGAAACTCTGGTTAATTATGTTGGCATAAAAGATATCCGGTTTGAAAATACCACAGTTCCCCAATTTCTAATAAACAAGGACAAAAAATTTCTATTCACCATTAGCAGGATAAACAAGAAGAAAAATTTTCATGTATTGCTAGATACAATGAAACGGCTACCTCAATACGATCTCTATATTTGTGGTAATTTCGATAGTGAATATGCCCAAGAGATGATACGACGTATCAAGGAAGAGAGCATTACCAATATTATAATGCCCGGAGAGATATCTTTCAGTGAAAAAATATGGATGTATAAGAACTGCCATGCATTTTTGTTCCCATCACTATTCGAAGGATTTGGCATGCCTGTAATAGAAGCAATGCAGTTCGGAAAACCAGTATTTAGCTCCCGCTGTACCAGTTTGCCTGAAATAGGATCCATACATTCTTATTTTTTTAAAGATTTCACTCCCGAACATATGTCTTCTTTTATCAATGAAAATATAGAATCTTTTTATTTGGACACCAATAAAATACAACAGCAAATAGAATATAGCTTATCATATACTCTGGATAGGCATATGAATAAGTATTTGGAGTTATATAGAAATATT",
"points": [{"x":66.5278139373427,"y":0},{"x":66.5278139373427,"y":2},{"x":75.3094506638896,"y":2},{"x":75.7094506638896,"y":1},{"x":75.3094506638896,"y":0}]}
,{
"name": "orf00012",
"orfname": "orf00012",
"gene_start": 8721,
"gene_end": 9533,
"gene_strand": "-",
"real_start": 84004,
"real_end": 84816 ,
"real_strand": "+",
"name": "orf00012",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     79.2068037837369,
"motifs":    "",
"function":  "",
"annotation":"",
"protein":"MISNKNLVAVVIPIYQTELTLIELSILEHNLEILNSYPIVIVCPQDLNVFNIPIFRNCQKLDIKRFSNNYFTSIEGYNELMLASEFYSYFSEFRYVLICQTDAFVFKDELSSWCDKNYDYIGGPWLGSSNNRYLNKLNSLLADFNLIKRRDTWFLFKVGNGGFSLRKVSSFLKVLAHPAYNELINSIRGASGEHVFATEDLFWSFKAKELVPDFYIPDYIEACGFSTDRRPNIALKIHKSLPFGCHGLGRPNVWKFWKDLIKRILKSENR",
"dna":"ATGATATCAAATAAGAATCTAGTTGCAGTTGTTATTCCTATATATCAAACAGAATTAACTCTCATAGAGCTTTCAATATTAGAGCATAATTTAGAAATTTTAAATAGTTACCCAATCGTGATTGTTTGTCCCCAGGATTTGAATGTATTTAATATACCGATTTTTCGGAATTGCCAGAAGTTGGATATAAAACGTTTCTCTAATAATTATTTTACAAGTATTGAAGGGTACAATGAATTAATGTTGGCATCTGAGTTTTATTCTTATTTTTCAGAGTTTCGTTATGTTCTTATTTGTCAGACAGATGCTTTTGTTTTTAAGGATGAGCTTTCCTCGTGGTGCGACAAAAACTATGATTATATAGGTGGTCCATGGCTAGGTTCTTCTAATAATAGATATCTTAACAAACTTAACAGTCTACTCGCCGATTTTAATCTAATAAAAAGAAGAGATACATGGTTTTTGTTTAAAGTTGGTAATGGAGGTTTCTCTTTGCGCAAGGTTTCAAGCTTTTTAAAAGTATTAGCTCATCCTGCTTATAACGAATTAATAAATTCAATTAGAGGAGCCAGTGGAGAGCATGTATTTGCTACGGAAGATTTATTTTGGTCATTCAAAGCAAAGGAACTAGTCCCTGATTTTTATATTCCTGATTATATTGAGGCTTGCGGTTTTTCTACAGATAGACGTCCTAATATTGCCTTAAAAATACATAAAAGTTTACCGTTTGGATGTCATGGCTTAGGTCGTCCTAATGTTTGGAAGTTTTGGAAGGATTTGATCAAGAGGATATTAAAATCCGAAAATCGT",
"points": [{"x":75.6834157771414,"y":1},{"x":76.0834157771414,"y":2},{"x":82.7301917903324,"y":2},{"x":82.7301917903324,"y":0},{"x":76.0834157771414,"y":0}]}
,{
"name": "103.3;BSAP-3",
"orfname": "orf00013",
"gene_start": 9986,
"gene_end": 11380,
"gene_strand": "-",
"real_start": 82157,
"real_end": 83551 ,
"real_strand": "+",
"name": "103.3;BSAP-3",
"color":     "#70c947",
"yline":     10,
"angle":     -60,
"xtext":     92.7102317104921,
"motifs":    "",
"function":  "103.3;BSAP-3",
"annotation":"Evalue=2.46e-55 match=30.400%;",
"protein":"MKKLFYLLFICILSSCSSEESISSIEENDINLSSLRVSVHSKYKSLGWGIDLTGDYLKLDAVKAPVIDVDKFERDFSSRIISRESERYSYSNNFYGNNATEYVKSIDASLNGDFGAKIGEKDKEKFSKTISGNFSSKQSYASNYTFVGKDECIEVGKAYFVEKNVEVLQKYLDSGFLYSLSQNSASTIVSEYGTHVLLDITLGGKLSLLYRSEVVKTTKETTAKAGFSLVLSNFGLGGSGSVNTLLINNNTNAFLYAQSSGGSKSISESWDFNNGPLKSVSTSEWNSSVNFANCVVLKIQKAVPIYDLIADVTKKAQVKAVVEKYMEDRQLEILTPMHRYWSAGLRDHMYLVNRDDTAHEKWYVYEGIEFYGYNEQLPGTVPLYRYWSADLRDHMYKIVMDNNTKYKYEGIECYVYKKAEENTVPVYGYWSSKLRDHMYKISKDNNSKYAYEGIQFYAYPGNIK",
"dna":"ATGAAAAAATTATTTTATTTATTATTTATTTGTATTCTATCCTCATGTTCGTCGGAGGAGTCGATATCCTCAATTGAAGAAAATGATATTAACCTATCTTCTTTAAGGGTCTCTGTTCATTCAAAGTATAAATCATTAGGATGGGGAATTGACTTGACTGGTGACTACCTTAAGCTTGATGCTGTAAAAGCACCGGTTATTGATGTTGATAAATTTGAAAGAGACTTTTCTTCTAGAATTATAAGTAGAGAATCGGAAAGATATTCTTATAGTAATAATTTTTATGGAAATAATGCTACTGAATATGTCAAATCTATAGATGCATCTCTTAATGGTGATTTTGGTGCAAAAATAGGAGAGAAGGATAAAGAAAAATTTTCAAAAACAATAAGCGGAAATTTCTCGTCTAAGCAATCTTATGCATCTAATTATACATTTGTAGGGAAAGATGAATGTATTGAAGTTGGAAAAGCCTATTTTGTGGAAAAAAATGTTGAAGTTTTACAAAAATATTTGGATTCTGGTTTTTTATATAGTTTGTCCCAAAATTCTGCTTCCACAATTGTTTCAGAGTATGGTACTCATGTTTTGTTAGATATTACTCTTGGGGGAAAATTGAGCCTGCTTTATAGAAGTGAAGTTGTAAAGACTACAAAAGAAACCACCGCAAAAGCTGGCTTTTCTCTCGTTTTAAGTAATTTTGGTTTAGGAGGTTCTGGTAGTGTGAATACTCTATTGATAAACAATAATACAAATGCGTTTTTGTATGCTCAATCAAGTGGTGGTAGTAAATCTATATCGGAATCTTGGGACTTTAATAATGGACCATTAAAAAGTGTTTCTACTTCGGAATGGAATAGTTCTGTTAATTTTGCAAATTGTGTTGTACTAAAAATACAAAAAGCAGTACCTATTTATGATCTAATTGCTGATGTTACAAAGAAGGCTCAGGTAAAAGCTGTTGTCGAAAAATATATGGAAGATAGACAATTGGAAATTCTTACGCCAATGCATAGGTATTGGAGTGCTGGGTTAAGAGATCATATGTATTTAGTTAATAGAGATGATACCGCTCATGAAAAATGGTATGTTTATGAGGGTATTGAATTTTATGGTTATAATGAACAGTTACCAGGAACAGTGCCATTGTATCGTTATTGGAGTGCCGACTTGAGGGATCATATGTATAAGATTGTAATGGACAATAATACAAAATATAAATATGAAGGAATCGAGTGCTATGTTTATAAAAAAGCAGAAGAAAATACAGTGCCTGTATATGGTTATTGGAGTTCTAAATTAAGAGATCATATGTATAAAATATCAAAGGATAATAATAGTAAATATGCTTATGAAGGTATTCAATTTTATGCTTATCCTGGAAATATAAAA",
"points": [{"x":86.661459689317,"y":1},{"x":87.061459689317,"y":2},{"x":98.7590037316671,"y":2},{"x":98.7590037316671,"y":0},{"x":87.061459689317,"y":0}]}
]}