{
"AOIs": [ 
{
"name": "NZ_RWHZ010000071.5675.AOI_01",
"filename": "/data/pg-molgen/USERS/Vicky/Genomes_Bacteroidales/Bacteriodaceae/Bacteroides_vulgatus/GCF_000012825.1_ASM1282v1_genomic.fna",
"color": "gray",
"yline": 10,
"xstart": 5,
"points": [ {"x":0,"y":10}, {"x":800,"y":10} ]
}
],
"Genes": [
{
"name": "orf00001",
"orfname": "orf00001",
"gene_start": 162,
"gene_end": 284,
"gene_strand": "+",
"real_start": 104093,
"real_end": 104215 ,
"real_strand": "+",
"name": "orf00001",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     1.90614582442944,
"motifs":    "",
"function":  "",
"annotation":"",
"protein":"VLSKAMNQNAFFLSDIYFSVFYIYCRKSTNNSLVIPNFAF",
"dna":"GTGCTTAGTAAGGCTATGAACCAAAATGCTTTTTTCTTGTCTGACATATATTTTTCGGTCTTTTATATTTACTGTCGCAAAAGTACGAATAATTCTTTAGTAATACCTAACTTTGCATTT",
"points": [{"x":1.38473373792632,"y":0},{"x":1.38473373792632,"y":2},{"x":2.02755791093256,"y":2},{"x":2.42755791093256,"y":1},{"x":2.02755791093256,"y":0}]}
,{
"name": "orf00002",
"orfname": "orf00002",
"gene_start": 289,
"gene_end": 669,
"gene_strand": "+",
"real_start": 104220,
"real_end": 104600 ,
"real_strand": "+",
"name": "orf00002",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     4.09436703991794,
"motifs":    "",
"function":  "",
"annotation":"",
"protein":"MKMNKLKQIPEFLRFVMVGLFATGLHYGIYFVLQKFIQVNVAYTLGYVLSFVANFYLTAYFTFGQPPSWKKAFGFGGAHLTNYLIHIGLLNLFLRLGFSRPLAPIPVFLIAIPVNFLLVRFVFKQK",
"dna":"ATGAAAATGAATAAACTGAAACAGATACCCGAGTTCCTGCGATTTGTAATGGTAGGCCTTTTTGCTACAGGGCTGCACTATGGCATTTATTTTGTCTTGCAAAAATTCATTCAGGTCAATGTAGCCTATACCTTGGGATATGTGCTGAGTTTTGTTGCCAACTTTTATCTTACGGCTTATTTTACTTTCGGGCAGCCTCCTTCCTGGAAGAAAGCTTTTGGCTTCGGGGGGGCACATCTGACAAATTATCTGATACATATCGGATTGTTGAATCTCTTTCTGCGGTTGGGTTTTTCCCGTCCGTTGGCTCCCATCCCAGTGTTTCTCATTGCCATTCCGGTAAATTTTTTATTAGTGAGGTTTGTTTTCAAACAAAAG",
"points": [{"x":2.47029660654757,"y":0},{"x":2.47029660654757,"y":2},{"x":5.31843747328831,"y":2},{"x":5.71843747328831,"y":1},{"x":5.31843747328831,"y":0}]}
,{
"name": "orf00005",
"orfname": "orf00005",
"gene_start": 688,
"gene_end": 1653,
"gene_strand": "+",
"real_start": 104619,
"real_end": 105584 ,
"real_strand": "+",
"name": "orf00005",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     10.0051286434738,
"motifs":    "PF00535",
"function":  "Uncharacterized glycosyltransferase sll0501 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=sll0501 PE=1 SV=1",
"annotation":"Species='-'<br>match=46.205%|Evalue=3.34e-103<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|Q55487|Y501_SYNY3>sp|Q55487|Y501_SYNY3</a>",
"protein":"MIVKNDMKKVTLLIPVYNEEAMLPTLYQRLIELVNRNAVYEWEILFVNDGSSDTTLECLRRLRQQDKRVNYVNLSRNFGKEVAMLAGFDYATGDCCVVMDADLQDPPELVDQMLEYWEEGYDDIYAKRRTRGEESWLRRQFSLAFYGILQRMSRIDILPNVGDFRLLDRRCVLTLRRLRECERYTKGLFCWIGYQKKSIEFDRGDRLMGHSSWNFLKLLNLAVEGITSFSIAPLRIATVCGVLCSISSFIYAIYFLIKTVLYGDETAGFPTLIIVMLFLGGIQLFSLGIIGEYVGRIFKETKGRPTYIASDYNEEKLGYDR",
"dna":"ATGATAGTGAAGAATGATATGAAGAAAGTGACTCTTTTGATTCCGGTATATAATGAGGAAGCGATGCTGCCCACTCTGTATCAACGTTTGATAGAGCTTGTCAACCGCAATGCCGTTTATGAGTGGGAAATCCTGTTTGTCAATGATGGCAGCAGCGACACTACGCTGGAATGCCTCCGCCGGCTGAGGCAGCAGGACAAGCGGGTGAATTATGTCAACCTTTCGCGTAACTTTGGTAAAGAGGTAGCCATGCTGGCGGGTTTTGATTACGCCACCGGCGATTGCTGCGTTGTGATGGATGCTGATTTGCAGGACCCTCCGGAACTGGTAGACCAGATGCTGGAATATTGGGAAGAAGGATATGATGACATTTATGCCAAACGGCGTACCCGTGGCGAGGAAAGCTGGTTGCGTCGTCAGTTCTCTCTGGCTTTTTATGGTATACTTCAGCGGATGAGCCGTATTGATATTTTGCCCAATGTAGGCGATTTCAGGCTTCTGGACCGTCGTTGTGTGCTCACGTTGCGTCGTCTGCGCGAATGCGAGCGTTATACAAAAGGATTGTTTTGCTGGATAGGCTATCAGAAGAAAAGCATTGAATTTGATCGCGGAGACAGGCTGATGGGCCATTCCTCCTGGAACTTTCTCAAGCTGTTGAATCTGGCTGTCGAAGGGATAACCTCTTTCTCTATCGCCCCTTTGCGCATCGCCACGGTATGCGGAGTGCTCTGTTCAATCTCCAGTTTTATTTATGCCATTTATTTTCTGATAAAGACCGTGCTTTATGGTGATGAAACGGCCGGCTTCCCCACTTTGATCATTGTCATGCTCTTTTTAGGTGGCATCCAGCTTTTCTCTTTGGGAATTATAGGAGAGTACGTGGGGCGCATTTTCAAGGAGACCAAAGGCCGTCCTACCTACATAGCCTCTGATTATAACGAGGAGAAGTTGGGGTATGACCGT",
"points": [{"x":5.88084451662535,"y":0},{"x":5.88084451662535,"y":2},{"x":13.7294127703222,"y":2},{"x":14.1294127703222,"y":1},{"x":13.7294127703222,"y":0}]}
,{
"name": "orf00010",
"orfname": "orf00010",
"gene_start": 1684,
"gene_end": 3732,
"gene_strand": "-",
"real_start": 105615,
"real_end": 107663 ,
"real_strand": "-",
"name": "orf00010",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     23.1472775450893,
"motifs":    "",
"function":  "Uncharacterized protein HI_1246 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=HI_1246 PE=4 SV=1",
"annotation":"Species='-'<br>match=25.741%|Evalue=1.98e-39<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|P44135|Y1246_HAEIN>sp|P44135|Y1246_HAEIN</a>",
"protein":"MQTLLKQMKYLRSLMQQSVTACKNQAKLIQQFTLSLLYLLIIHIVALLFFFLFRLVLFTSIDYQFPPDIQNNFLMQATAFIKGLWFDNVIACYILLLPLVILWITALCNYHSKWVFRFISIFFILFYSLSFIISAANIPYFSYFFKTINSSIYNWFGYGATTAGMVLGETSFYFPIFLGLISILLLSGSVLRLSSYFYHLINSKSTSISPINRLCIFAAGAVCIGLCLFGIRGRMGYNPIRVSQAYYCTDPFLNQLGVNPVFNLLTSTLDDNRKENRYLHLMPEQEAITNMQSILQRKGIEGISPIAREVKCAAVPTQKNVVLIFMESMSANLMEHFGSTRKLTPFLDSLYLESLSFDHFYSAGIHTNHGMYATLYSFPAIMKRNAMKGAVVPVYSGLPTVLKDNGYRNLFFMTHESQYDNMNAFLRTNGFDEIYAQENYPKDKVVNSFGVQDDFLYQYALPILNKRAEERQPFFTVLLSISNHPSYVIPDYFKPHSTKLEDQIVEYADWAIRQFMQEARKQPWFENTIFVLLGDHGKLVGSPDCEIPQSYNHVPLMIYGKGIKPEIRQEPGGQTDVAPTLLGLLNMSYTQNDFGINLLTEQRPYVYFSADNLIAATDTTHLYIYSPHDRQEFKYKKQGNALQLVTGEDSTFYVMKKYCFSTLQSAEYLVKEHKTVNKATGQ",
"dna":"ATGCAAACTTTACTAAAACAAATGAAATATCTCCGTTCACTCATGCAGCAATCTGTAACAGCATGTAAGAATCAGGCTAAGCTTATCCAACAGTTTACTCTTTCTTTACTTTACTTATTAATCATACATATAGTTGCTTTACTTTTTTTCTTCCTGTTCCGGCTTGTCCTGTTCACCTCAATAGATTATCAGTTTCCTCCCGATATACAAAACAACTTTCTCATGCAAGCCACTGCATTTATAAAAGGGCTATGGTTTGACAATGTTATAGCTTGCTACATATTGCTGTTACCATTAGTCATTTTATGGATAACCGCTCTCTGCAACTATCACTCCAAGTGGGTATTCAGATTTATCTCTATCTTTTTCATCCTATTTTATTCACTGTCGTTCATTATTTCGGCAGCCAACATCCCTTATTTCTCCTATTTTTTTAAAACAATCAATTCTTCCATTTACAATTGGTTCGGATATGGAGCCACTACTGCCGGAATGGTATTGGGTGAGACATCATTCTATTTCCCTATTTTTCTAGGACTGATATCTATTCTTCTGCTGTCAGGAAGTGTACTACGGTTATCTTCTTATTTCTATCATCTCATCAATTCGAAATCTACTTCCATCAGCCCGATAAACCGCCTATGTATATTCGCCGCCGGTGCTGTTTGTATAGGACTTTGTCTATTCGGAATACGGGGACGCATGGGATATAACCCCATCAGGGTAAGTCAAGCATACTATTGTACCGATCCATTCCTGAATCAGCTAGGGGTTAATCCTGTCTTTAATCTACTTACCAGCACACTGGATGATAACCGTAAGGAAAACCGCTATCTTCACCTGATGCCGGAACAGGAGGCAATAACCAATATGCAAAGTATATTGCAAAGAAAAGGAATAGAAGGCATCTCCCCCATTGCACGTGAAGTGAAATGCGCAGCCGTCCCTACACAAAAGAATGTTGTTCTTATTTTCATGGAATCAATGTCGGCCAACTTGATGGAGCATTTCGGATCTACCAGAAAACTGACTCCTTTCCTAGACAGCCTTTATCTGGAATCTCTCAGTTTTGACCATTTTTATTCAGCAGGCATACATACCAACCACGGAATGTATGCCACCCTCTACTCTTTCCCTGCCATCATGAAACGGAATGCCATGAAAGGAGCAGTGGTACCTGTCTATTCGGGGTTGCCCACCGTATTAAAGGATAATGGCTATCGGAACCTGTTCTTCATGACGCACGAATCACAATACGATAATATGAACGCTTTTCTCCGCACTAACGGATTTGATGAAATATATGCACAAGAAAACTACCCAAAGGATAAAGTCGTTAACAGCTTTGGTGTACAAGACGATTTCCTATATCAATATGCCTTGCCCATTCTGAACAAAAGAGCAGAAGAAAGACAACCTTTCTTTACCGTATTGCTTTCTATCAGCAACCATCCCTCGTATGTGATACCTGACTATTTCAAACCACACAGCACAAAGCTTGAAGATCAGATTGTGGAATACGCGGACTGGGCCATCCGGCAATTCATGCAAGAAGCACGCAAACAACCTTGGTTTGAAAATACAATCTTTGTTTTGCTGGGTGACCATGGGAAATTGGTAGGAAGTCCGGACTGTGAAATACCACAATCCTACAACCATGTTCCACTAATGATTTACGGAAAAGGCATCAAGCCCGAAATCAGACAAGAGCCGGGCGGCCAGACTGATGTGGCACCGACTTTACTCGGACTGCTGAACATGAGTTATACCCAAAACGACTTCGGCATAAATTTGTTAACAGAACAACGCCCGTATGTCTATTTCTCCGCCGATAATTTGATAGCGGCTACAGATACAACCCACCTATATATTTATTCTCCACATGACCGGCAGGAATTCAAATATAAGAAGCAAGGAAACGCCTTGCAACTTGTAACAGGGGAGGACAGTACATTCTACGTGATGAAAAAATACTGTTTCTCCACATTGCAGAGTGCGGAGTATCTGGTAAAAGAGCACAAGACTGTCAATAAAGCTACCGGACAA",
"points": [{"x":14.3943926831353,"y":1},{"x":14.7943926831353,"y":2},{"x":31.9001624070433,"y":2},{"x":31.9001624070433,"y":0},{"x":14.7943926831353,"y":0}]}
,{
"name": "sORF_1",
"orfname": "sORF_1",
"gene_start": 3727,
"gene_end": 3915,
"gene_strand": "+",
"real_start": 107658,
"real_end": 107846 ,
"real_strand": "+",
"name": "sORF_1",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     32.6609111889905,
"motifs":    "RBS=CATTTGTTTTAGTAAAGT<br>",
"function":  "",
"annotation":"",
"protein":"LHLFESIRMIDNKGKQNFRNIKRGYAKSKIGCQFVHFRGRYVSPPENMGKQFPFLILFLGKEx",
"dna":"TTGCATTTGTTTGAATCAATCCGGATGATTGACAACAAAGGTAAACAGAATTTTAGAAATATCAAAAGAGGGTATGCCAAAAGTAAAATAGGCTGCCAATTTGTTCACTTTAGGGGCAGATATGTGAGTCCGCCCGAAAATATGGGCAAGCAGTTTCCGTTTCTTATCCTATTTCTCGGGAAGGAGTAA",
"points": [{"x":31.8574237114283,"y":0},{"x":31.8574237114283,"y":2},{"x":33.0643986665527,"y":2},{"x":33.4643986665527,"y":1},{"x":33.0643986665527,"y":0}]}
,{
"name": "sORF_5",
"orfname": "sORF_5",
"gene_start": 3742,
"gene_end": 3834,
"gene_strand": "-",
"real_start": 107673,
"real_end": 107765 ,
"real_strand": "-",
"name": "sORF_5",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     32.3788357979314,
"motifs":    "RBS=CACATATCTGCCCCTAAA<br>",
"function":  "",
"annotation":"",
"protein":"VNKLAAYFTFGIPSFDISKILFTFVVNHPDx",
"dna":"GTGAACAAATTGGCAGCCTATTTTACTTTTGGCATACCCTCTTTTGATATTTCTAAAATTCTGTTTACCTTTGTTGTCAATCATCCGGATTGA",
"points": [{"x":31.9856397982734,"y":1},{"x":32.3856397982734,"y":2},{"x":32.7720317975895,"y":2},{"x":32.7720317975895,"y":0},{"x":32.3856397982734,"y":0}]}
,{
"name": "orf00013",
"orfname": "orf00013",
"gene_start": 3890,
"gene_end": 4879,
"gene_strand": "-",
"real_start": 107821,
"real_end": 108810 ,
"real_strand": "-",
"name": "orf00013",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     37.4775621848021,
"motifs":    "PF00535",
"function":  "Glycosyltransferase GlyG OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=glyG PE=1 SV=1",
"annotation":"Species='-'<br>match=36.641%|Evalue=9.30e-17<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|A0A0H2UR96|GLYG_STRPN>sp|A0A0H2UR96|GLYG_STRPN</a>",
"protein":"MNALPLVSVVVPNYNYKRYLNLRIQSILQQTYQNIELILLDDASTDGSEEVLSVYQNHAKVSHILLNEHNTGNPFKQWFKGMQLAKGKYIWIAEADDLCELTFLEKVVPLMEKYQQAAVCFAGSKYIDKDGNVLSCDMNKWKSAIPPYAVFNGKTYAEHNLYWRSYIANASSAIFRKSMVNAQNMEQCLQMRYSGDWLFWFYMAMQGDIIERYEVLNYFRQHNQKVTVKAENNGGGKSEDIEIVRIMEQHLTHLSRYKRCIRRGMLYNRIAKLSTTDRVKLQLWELLRQKLNGTQKDGRLERLNRIARLFCPFVLTMKRDRLTPSREIG",
"dna":"ATGAATGCACTCCCCTTGGTCAGTGTAGTGGTACCTAATTATAATTATAAACGATACCTCAATCTACGAATTCAGAGTATTCTGCAACAAACCTATCAGAATATCGAACTGATTTTACTTGATGATGCCTCAACAGACGGTAGCGAAGAGGTATTATCGGTCTATCAAAACCATGCCAAAGTGAGCCATATTCTATTAAACGAACACAACACCGGAAATCCATTTAAACAATGGTTTAAAGGCATGCAATTAGCCAAAGGAAAATATATATGGATAGCCGAAGCCGATGACTTGTGTGAGCTTACTTTTTTAGAGAAAGTAGTTCCTTTAATGGAGAAATACCAACAAGCCGCCGTATGCTTTGCCGGTTCCAAGTATATTGATAAAGACGGTAATGTGCTGAGTTGCGACATGAACAAATGGAAATCTGCCATACCTCCATACGCCGTGTTCAATGGGAAAACTTATGCCGAACATAACCTTTACTGGCGCAGCTATATAGCCAATGCAAGCTCGGCCATTTTCAGAAAAAGCATGGTAAATGCCCAAAATATGGAACAATGCCTGCAAATGCGTTACAGCGGCGACTGGCTGTTCTGGTTTTATATGGCAATGCAAGGAGACATTATAGAAAGGTATGAAGTACTGAACTACTTCAGACAACATAACCAGAAAGTTACCGTCAAAGCTGAAAACAACGGAGGGGGTAAGAGCGAAGATATTGAGATAGTCCGCATTATGGAACAACACCTTACCCACCTGAGCAGATACAAACGGTGCATACGAAGGGGAATGCTTTACAACCGCATTGCCAAACTAAGCACAACAGACCGGGTAAAACTGCAATTATGGGAACTCCTCCGGCAGAAATTAAACGGAACGCAGAAAGACGGACGTCTGGAGCGCCTCAACCGGATAGCACGGCTATTCTGTCCTTTTGTTCTGACTATGAAACGAGACCGCCTTACTCCTTCCCGAGAAATAGGA",
"points": [{"x":33.2507051884776,"y":1},{"x":33.6507051884776,"y":2},{"x":41.7044191811266,"y":2},{"x":41.7044191811266,"y":0},{"x":33.6507051884776,"y":0}]}
,{
"name": "orf00014",
"orfname": "orf00014",
"gene_start": 5125,
"gene_end": 6441,
"gene_strand": "+",
"real_start": 109056,
"real_end": 110372 ,
"real_strand": "+",
"name": "orf00014",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     49.4315753483204,
"motifs":    "",
"function":  "Uncharacterized 44.6 kDa protein in cps region OS=Klebsiella pneumoniae OX=573 PE=4 SV=1",
"annotation":"Species='-'<br>match=21.965%|Evalue=9.00e-06<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|Q48455|YC09_KLEPN>sp|Q48455|YC09_KLEPN</a>",
"protein":"MRKKILFIIPYIPYPLDSGGNQAFFNMVEYLRHKMSVSVLLYPETGRRMQDVESLKKIWDNVDFFIYTPKTKTVRLPKIKHPFYYKWLQKIHASVTRKMNRQQIWTDETGEVVDLVRGKSTLFSSCFQPLDQGYVEYVSQVAHSGFDIIQVEFYELLSLGFLLPENVQTIFVHHELRYIRNEKEITLFREQTAGDRMLFHIAKDFERSALLKYKDVIVLTEVDRKIMEDFIGRKDHIYTSPAVVQVGDRLEQPFVPVQSGRLTFVGSEDHFPNLDAVAWFCHEVIPHLRKRHFSFTLQVIGKWRGECINRLQSEYPELKLAGYVEDLGSFLKGSVAVVPIRIGSGMRMKILDAVLSKVPFVTTAKGVEGIDFKDGEDCLIVDDPAGFAEAVIALSSNPQLQRQLVTHVEDSLRQVYNPGQMQERRLAVYEQILGDKVG",
"dna":"ATGAGAAAGAAAATTCTTTTTATTATTCCGTACATTCCTTATCCGCTGGATTCGGGCGGTAATCAAGCTTTCTTTAATATGGTGGAATATCTGCGTCATAAGATGTCCGTATCTGTATTGCTTTATCCTGAAACAGGGAGACGTATGCAAGATGTAGAGTCATTGAAGAAAATTTGGGATAATGTGGATTTCTTTATTTATACTCCTAAAACTAAAACTGTCAGATTACCCAAAATTAAACATCCTTTTTATTATAAATGGCTGCAAAAGATACATGCGTCTGTAACCCGTAAAATGAACCGGCAACAGATATGGACGGATGAAACAGGCGAAGTTGTGGATTTAGTACGGGGAAAGAGTACTTTGTTCAGCTCTTGTTTCCAGCCGCTAGACCAGGGGTATGTGGAGTATGTTTCTCAGGTGGCTCATTCAGGTTTTGATATTATTCAAGTAGAGTTTTATGAACTGTTGTCATTGGGATTCTTGTTGCCTGAAAATGTACAGACTATTTTTGTGCATCATGAACTCCGCTACATCCGTAATGAAAAGGAGATTACTTTGTTCAGGGAACAGACTGCCGGTGACAGGATGTTGTTTCATATAGCAAAGGATTTTGAGCGCAGTGCATTATTGAAATATAAAGATGTTATTGTTCTGACTGAAGTAGACCGTAAAATTATGGAGGACTTCATAGGACGGAAAGACCATATCTACACTTCTCCGGCTGTGGTGCAAGTGGGTGACAGGCTGGAACAGCCTTTTGTTCCGGTCCAAAGCGGACGCCTGACTTTTGTGGGAAGTGAGGATCATTTTCCCAATCTGGATGCCGTGGCATGGTTCTGTCACGAAGTGATTCCGCATCTGCGTAAACGTCATTTTTCGTTTACATTGCAAGTAATTGGTAAATGGCGTGGAGAGTGTATCAATCGTTTGCAGTCCGAATACCCGGAATTGAAGCTGGCAGGCTATGTGGAAGATCTGGGCTCTTTTTTAAAAGGCAGTGTTGCTGTTGTTCCAATACGTATCGGTAGTGGTATGCGTATGAAAATATTAGATGCTGTATTGTCAAAAGTACCTTTTGTAACGACGGCAAAGGGTGTGGAAGGTATTGATTTTAAGGATGGTGAAGATTGCTTGATTGTTGATGACCCTGCCGGATTTGCAGAAGCTGTCATAGCCTTGTCAAGTAATCCGCAGTTGCAGAGACAGTTGGTTACCCATGTGGAAGACAGTTTGCGGCAAGTATATAACCCCGGACAGATGCAGGAAAGAAGGCTTGCCGTGTATGAACAAATATTAGGGGATAAAGTGGGG",
"points": [{"x":43.8071630053851,"y":0},{"x":43.8071630053851,"y":2},{"x":54.6559876912557,"y":2},{"x":55.0559876912557,"y":1},{"x":54.6559876912557,"y":0}]}
,{
"name": "ABC",
"orfname": "orf00017",
"gene_start": 6490,
"gene_end": 8337,
"gene_strand": "+",
"real_start": 110421,
"real_end": 112268 ,
"real_strand": "+",
"name": "ABC",
"color":     "#ff3f3f",
"yline":     10,
"angle":     -60,
"xtext":     63.3686639883751,
"motifs":    "PF00005",
"function":  "Lipid A export ATP-binding/permease protein MsbA OS=Syntrophus aciditrophicus (strain SB) OX=56780 GN=msbA PE=3 SV=1",
"annotation":"Species='-'<br>match=40.430%|Evalue=7.46e-135<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|Q2LVL0|MSBA_SYNAS>sp|Q2LVL0|MSBA_SYNAS</a>",
"protein":"LIIMLKQFFSLLKRYILPYRKYLTWALILNFLSQWLNVFSFMAIVPILNILFKIDTKSYEYIPMDIHNLDKDVLINNAYYFVSNFVATNGAFYTLAMMGGILIFMTMLKTAGYFASAAVMVPLRTGIVRDIRIQVYNKVLSLPLSFFSEERKGDIIARMSADVTVVENSLTSSIDMLIRNPIALLVCFVTLFSVSWQMTLFVIFILPLTGWIMGVVSRKLKRQSSTAQAQWGDIMSQLDETLGGLRVIKAFIAESKMSARFSKTNNDFRDAMNEMIIRQSSAHPMSEFLGTCVIVTVLLFGGALILNTNYAPMDAATFIFYLIILYSIINPLKEFSRAFYNIPQGLASMERIDMILKAENHIVEPEQPLPLDAFTDKLEFKNVSFSYVEGRPVLNHINLTVPKGKTIALVGQSGSGKSTLVDLVPRYHDVSEGALLIDGKNVKDVSIHSLRSLIGNVNQEAILFNDTFYNNITFGVENATMEQVIEAAKIANAHDFIMETEKGYDTMIGDRGGRLSGGQRQRVSIARAILKNPPILILDEATSALDTESERLVQEALERLMKSRTTIAIAHRLSTIKNADEICVLYEGDIVERGTHDELIALNGYYKKLNDMQSL",
"dna":"TTGATAATTATGCTGAAACAGTTCTTTAGTTTGTTGAAGCGGTATATTCTTCCATACCGCAAATATTTGACATGGGCATTGATACTGAACTTTCTGTCGCAATGGCTTAATGTGTTTTCGTTCATGGCGATTGTGCCAATTTTGAACATTCTGTTCAAAATTGATACCAAGTCTTATGAGTACATTCCTATGGATATTCATAATTTGGATAAGGATGTACTCATAAATAATGCCTATTACTTTGTGAGCAATTTTGTGGCTACAAATGGTGCGTTCTATACACTTGCCATGATGGGAGGAATACTTATCTTTATGACTATGTTGAAAACTGCCGGTTATTTTGCTTCTGCGGCTGTCATGGTACCTTTGCGTACAGGTATTGTCCGGGATATCCGTATTCAGGTTTATAATAAAGTGTTAAGTCTTCCTTTGAGTTTTTTCTCAGAAGAACGTAAAGGAGATATCATAGCCCGTATGAGTGCGGATGTTACGGTGGTGGAGAACTCGTTGACCAGTTCCATCGATATGCTTATCCGTAATCCTATCGCTCTTTTGGTTTGTTTTGTCACTCTGTTTTCGGTAAGTTGGCAAATGACGCTTTTTGTTATCTTTATTTTACCTCTGACAGGTTGGATAATGGGGGTTGTCAGCCGGAAGCTGAAAAGACAGTCCTCTACAGCACAGGCGCAATGGGGAGATATTATGTCCCAATTGGATGAAACATTAGGAGGTTTAAGGGTTATCAAAGCGTTTATAGCCGAAAGCAAAATGTCTGCCCGGTTCTCTAAAACAAACAATGACTTCCGCGATGCAATGAACGAGATGATTATCCGGCAAAGTTCAGCCCACCCCATGAGTGAGTTTTTAGGCACTTGTGTGATTGTGACCGTGCTGTTGTTTGGCGGTGCTTTAATCTTAAATACAAACTATGCTCCGATGGATGCGGCTACTTTCATATTTTATCTGATTATCCTTTATAGTATCATCAATCCTTTGAAAGAATTTTCAAGAGCATTTTATAATATTCCGCAGGGATTGGCCAGTATGGAGCGAATTGATATGATATTGAAAGCGGAAAATCATATCGTAGAGCCGGAGCAGCCTTTGCCATTGGACGCTTTCACAGATAAGTTAGAGTTTAAAAATGTAAGTTTCAGCTATGTAGAAGGACGTCCGGTCTTGAACCATATCAATCTGACTGTTCCTAAAGGAAAAACGATTGCGCTGGTGGGCCAGTCCGGTTCCGGAAAGTCTACTTTAGTGGACTTGGTACCGCGTTATCACGATGTATCGGAGGGTGCATTGCTGATTGACGGCAAGAATGTGAAAGATGTATCCATCCACAGTTTACGTTCTCTGATTGGTAATGTAAATCAGGAAGCTATTCTGTTTAATGACACCTTCTATAACAATATTACTTTTGGTGTAGAGAATGCCACTATGGAGCAAGTAATAGAAGCTGCCAAGATAGCGAATGCACATGATTTCATTATGGAAACGGAAAAAGGATATGACACGATGATTGGTGATCGTGGAGGGCGTTTGTCCGGTGGTCAGCGTCAGCGTGTCAGTATAGCCCGTGCAATTTTGAAAAATCCTCCTATCCTTATATTAGATGAGGCTACTTCGGCTCTTGACACAGAGTCCGAGCGTTTGGTTCAGGAAGCGTTGGAGCGTTTGATGAAATCGCGTACTACTATCGCTATCGCACATAGATTGAGTACCATTAAGAATGCCGATGAAATTTGTGTACTTTATGAAGGCGATATCGTAGAAAGAGGAACTCACGATGAACTGATAGCCTTGAATGGATATTACAAGAAGTTGAACGATATGCAGTCTTTG",
"points": [{"x":55.4748269082828,"y":0},{"x":55.4748269082828,"y":2},{"x":70.8625010684674,"y":2},{"x":71.2625010684674,"y":1},{"x":70.8625010684674,"y":0}]}
,{
"name": "orf00018",
"orfname": "orf00018",
"gene_start": 8339,
"gene_end": 9271,
"gene_strand": "+",
"real_start": 112270,
"real_end": 113202 ,
"real_strand": "+",
"name": "orf00018",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     75.2628429780323,
"motifs":    "PF00535",
"function":  "Poly(ribitol-phosphate) beta-N-acetylglucosaminyltransferase TarS OS=Staphylococcus aureus (strain MW2) OX=196620 GN=tarS PE=1 SV=1",
"annotation":"Species='-'<br>match=36.232%|Evalue=3.88e-05<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|A0A0H3JVA1|TARS_STAAW>sp|A0A0H3JVA1|TARS_STAAW</a>",
"protein":"VEQIKKLAIVIPAYKGRFLKETLDSIAVQAHKDEFVLYIGDDASPERLDKIVESYQNKVNLVYHRFSENMGGKDLVAHWERCIQLSAEPFIWLFSDDDLMPADGVERVMEVLSRPHHQRGYFFRFPLAVIDGENKRIRANRPLEEGSVSCYRLLLDKLQGKIDSAAVEYVFSREIWQSAGGFVHFPMAWCSDDATWAAFARHAGGVISLPGQPVCWRNVEGANISNSAGHDKDKLHATILFLRWMRNMFSDYVDDPELISALQCYIHTILRISLHKHYNICGLWGVSMALGRFNKRAAFTTFFRNFRLFS",
"dna":"GTGGAGCAAATAAAGAAATTGGCAATTGTTATTCCTGCCTACAAGGGGCGTTTCCTTAAGGAAACGCTCGACTCAATTGCAGTTCAGGCCCATAAAGATGAGTTCGTGTTATATATAGGTGATGATGCAAGTCCTGAAAGATTGGATAAGATTGTGGAATCTTATCAGAATAAGGTAAATCTGGTGTATCATCGCTTTAGCGAAAATATGGGGGGCAAAGATTTGGTGGCCCATTGGGAGAGGTGTATCCAGCTGTCTGCAGAGCCGTTTATCTGGCTTTTCTCGGATGATGATTTGATGCCGGCTGATGGTGTGGAACGTGTCATGGAGGTTTTGTCGCGCCCACACCATCAGCGAGGATATTTTTTTCGTTTTCCATTAGCTGTCATTGATGGTGAAAACAAGCGGATACGTGCCAATCGTCCTTTGGAAGAAGGAAGTGTGTCTTGTTACCGGCTGCTGCTAGATAAGTTACAGGGAAAGATAGATTCGGCTGCCGTAGAGTACGTGTTCAGTCGGGAGATATGGCAGTCGGCAGGTGGTTTTGTTCATTTTCCTATGGCTTGGTGTTCGGATGATGCTACGTGGGCTGCTTTTGCCCGTCATGCGGGGGGTGTTATTTCTTTGCCGGGGCAGCCTGTATGTTGGAGGAATGTTGAAGGTGCAAACATCAGTAACTCTGCCGGTCATGACAAAGATAAATTGCACGCTACTATTCTTTTCTTGAGATGGATGAGGAATATGTTTTCCGATTATGTGGATGATCCGGAACTGATTAGTGCATTGCAATGCTATATCCATACCATCCTTCGTATTTCATTGCATAAACATTATAATATATGTGGTTTGTGGGGGGTATCTATGGCTTTGGGAAGATTTAATAAAAGGGCGGCCTTTACTACGTTTTTCAGGAATTTTAGGTTGTTCTCT",
"points": [{"x":71.2795965467134,"y":0},{"x":71.2795965467134,"y":2},{"x":78.8460894093512,"y":2},{"x":79.2460894093512,"y":1},{"x":78.8460894093512,"y":0}]}
,{
"name": "orf00022",
"orfname": "orf00022",
"gene_start": 9352,
"gene_end": 9480,
"gene_strand": "-",
"real_start": 113283,
"real_end": 113411 ,
"real_strand": "-",
"name": "orf00022",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     80.4855115821865,
"motifs":    "",
"function":  "",
"annotation":"",
"protein":"MNLILKPHNSLRMKNSPMSFFKKVKQYMTGRYTSDYTYRTEI",
"dna":"ATGAATCTGATTTTAAAACCACACAATTCCTTACGGATGAAAAACTCCCCAATGTCCTTCTTTAAAAAAGTGAAACAATATATGACAGGAAGATATACATCTGACTATACATACAGGACAGAAATA",
"points": [{"x":79.9384562783144,"y":1},{"x":80.3384562783144,"y":2},{"x":81.0325668860586,"y":2},{"x":81.0325668860586,"y":0},{"x":80.3384562783144,"y":0}]}
,{
"name": "sORF_4",
"orfname": "sORF_4",
"gene_start": 9505,
"gene_end": 9603,
"gene_strand": "-",
"real_start": 113436,
"real_end": 113534 ,
"real_strand": "-",
"name": "sORF_4",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     81.6650995811608,
"motifs":    "RBS=GAGTTATCTCCATAAGCT<br>",
"function":  "",
"annotation":"",
"protein":"LELSPKTMELTPKACGDKTNRKKALNHTARNVx",
"dna":"TTGGAGTTATCTCCCAAGACTATGGAGTTAACTCCAAAGGCTTGCGGAGATAAAACAAACAGGAAGAAAGCCCTTAACCATACAGCAAGAAATGTTTAG",
"points": [{"x":81.2462603641337,"y":1},{"x":81.6462603641337,"y":2},{"x":82.0839387981879,"y":2},{"x":82.0839387981879,"y":0},{"x":81.6462603641337,"y":0}]}
,{
"name": "sORF_3",
"orfname": "sORF_3",
"gene_start": 9573,
"gene_end": 9716,
"gene_strand": "-",
"real_start": 113504,
"real_end": 113647 ,
"real_strand": "-",
"name": "sORF_3",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     82.4386699717925,
"motifs":    "RBS=CAATAAATAAGGGAATGA<br>",
"function":  "",
"annotation":"",
"protein":"MDVYSSQPYCISFFYLQIKPFYMHLFYLHSLWSYLHKLWSYLPRLWSx",
"dna":"ATGGATGTGTATAGCAGTCAGCCCTATTGCATAAGCTTTTTCTATCTCCAGATTAAACCTTTTTATATGCATCTATTCTATCTCCATAGCCTTTGGAGTTATCTCCATAAGCTTTGGAGTTATCTCCCAAGACTATGGAGTTAA",
"points": [{"x":81.8275066244978,"y":1},{"x":82.2275066244978,"y":2},{"x":83.0498333190871,"y":2},{"x":83.0498333190871,"y":0},{"x":82.2275066244978,"y":0}]}
,{
"name": "sORF_2",
"orfname": "sORF_2",
"gene_start": 9645,
"gene_end": 9764,
"gene_strand": "+",
"real_start": 113576,
"real_end": 113695 ,
"real_strand": "+",
"name": "sORF_2",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     82.9515343191726,
"motifs":    "RBS=GCTATGGAGATAGAATAG<br>",
"function":  "",
"annotation":"",
"protein":"MHIKRFNLEIEKAYAIGLTAIHIHSFPYLLEEFIDSLYYx",
"dna":"ATGCATATAAAAAGGTTTAATCTGGAGATAGAAAAAGCTTATGCAATAGGGCTGACTGCTATACACATCCATTCATTCCCTTATTTATTGGAAGAATTTATAGATAGCCTGTATTATTGA",
"points": [{"x":82.442943841354,"y":0},{"x":82.442943841354,"y":2},{"x":83.0601247969912,"y":2},{"x":83.4601247969912,"y":1},{"x":83.0601247969912,"y":0}]}
,{
"name": "orf00024",
"orfname": "orf00024",
"gene_start": 9765,
"gene_end": 9887,
"gene_strand": "+",
"real_start": 113696,
"real_end": 113818 ,
"real_strand": "+",
"name": "orf00024",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     83.9900846226173,
"motifs":    "",
"function":  "",
"annotation":"",
"protein":"LSFFSAKISQFRLQIQCFFVYCQSTPYNLCLRYLCLWNEY",
"dna":"TTGTCTTTTTTTTCTGCAAAAATATCACAATTTCGCTTGCAAATTCAATGTTTTTTTGTATATTGCCAATCTACTCCTTATAATCTCTGTTTGAGATATCTTTGTTTGTGGAATGAATAC",
"points": [{"x":83.4686725361142,"y":0},{"x":83.4686725361142,"y":2},{"x":84.1114967091204,"y":2},{"x":84.5114967091204,"y":1},{"x":84.1114967091204,"y":0}]}
,{
"name": "103.3;BSAP-3",
"orfname": "orf00026",
"gene_start": 9989,
"gene_end": 11455,
"gene_strand": "+",
"real_start": 113920,
"real_end": 115386 ,
"real_strand": "+",
"name": "103.3;BSAP-3",
"color":     "#70c947",
"yline":     10,
"angle":     -60,
"xtext":     91.6488588768271,
"motifs":    "",
"function":  "103.3;BSAP-3",
"annotation":"Evalue=1.80e-174 match=57.172%;",
"protein":"VIIMKKRISLLSLCLGLFIAACTDSSGFEDLQNFSEKEVMPRAAGDGIYDVLGYGYDITSDYLGEASVRQPVLDVEAFIRDNKGRFDNPFIGTIEQKVTAGEDAWSFLQQTISNTNFSGSVAAMGKSDTSKGFFSGSITTGFKSDSKYSYSSKYSFARAEVIKKQRQYLLYTNAETLSRYLSSNFIADLNKYSADEIVRMYGTHVLTKITVGGSYRAYYKSVIVEEANRTEKMKTVTAGAKYNMKKVGLDANGSWNTTTITETNKKNSNWTCDIKCLGGTTSGTTITLSPNQGPTTTINLGAWTQSVDDTHSRLVDVDWNATYPIYDLVSDPAKKVALKNAVEKYIDSFKLEILELLPLYNYYSSKHINSSYFTEWKGTHFNTDDYQGVTCYLCASQVEGTVPLYEYYSAKYINQSLSSVWRGNQSNTDVYQRITGYIYKSQVLGTVPLYEYYSAKHINHSYSVQWKGLHFNTDDFQKIVGYVFPFED",
"dna":"GTGATAATTATGAAAAAACGAATTAGTTTATTAAGCCTTTGTTTAGGTTTATTCATTGCTGCTTGTACAGACAGTAGTGGTTTTGAGGATTTACAGAATTTCTCGGAAAAAGAGGTTATGCCACGTGCGGCAGGTGACGGAATTTATGATGTGTTGGGTTATGGATATGATATAACATCAGACTACTTGGGAGAAGCTTCTGTTCGTCAACCGGTTTTAGATGTAGAAGCATTTATTAGAGATAATAAGGGACGTTTTGATAATCCTTTTATTGGAACTATAGAACAAAAAGTTACTGCTGGTGAGGATGCATGGTCTTTTCTTCAGCAAACAATAAGTAATACAAATTTTTCTGGTTCTGTAGCTGCAATGGGTAAGTCTGATACATCAAAAGGATTTTTCTCCGGGAGTATTACTACAGGATTTAAGTCTGATTCTAAATATTCATATTCTTCCAAATATTCTTTTGCGCGAGCGGAAGTTATAAAGAAACAGAGACAATATCTTTTATATACTAATGCTGAAACCTTATCACGGTATTTATCTTCAAATTTTATAGCGGATTTAAATAAATACTCAGCTGATGAGATAGTTAGAATGTATGGAACTCATGTACTGACTAAAATAACAGTGGGTGGTTCCTATAGGGCCTATTATAAATCTGTTATTGTAGAAGAAGCCAATCGCACAGAGAAAATGAAGACTGTAACAGCTGGTGCTAAATATAATATGAAAAAGGTGGGGCTCGATGCAAATGGAAGTTGGAATACTACAACTATTACTGAAACGAATAAGAAAAATTCTAATTGGACGTGTGATATTAAATGTCTAGGAGGAACAACTTCTGGTACTACTATAACTTTATCTCCTAATCAGGGACCTACGACTACTATCAATTTAGGTGCATGGACACAATCAGTTGATGATACTCATTCCCGTTTGGTTGATGTTGATTGGAATGCTACTTATCCTATTTATGATTTAGTTTCAGATCCTGCAAAAAAAGTAGCATTAAAAAATGCAGTAGAAAAATACATTGATAGTTTTAAACTGGAGATATTGGAATTGTTGCCTTTATATAATTATTATAGCTCCAAACATATAAATAGTAGTTATTTTACAGAGTGGAAAGGAACGCATTTTAATACGGATGATTATCAAGGTGTAACATGCTATCTCTGTGCGAGTCAAGTGGAGGGAACAGTTCCTTTATATGAATATTATAGTGCAAAATATATAAATCAAAGTTTAAGTTCTGTATGGAGAGGTAATCAGAGTAATACAGATGTATACCAAAGAATAACAGGTTATATTTATAAATCGCAGGTTTTAGGAACAGTACCTTTATATGAATATTATAGTGCAAAACATATAAATCATAGTTATTCTGTTCAATGGAAAGGACTTCATTTTAATACGGATGATTTTCAAAAAATTGTAGGATATGTATTTCCTTTTGAAGAT",
"points": [{"x":85.3833660996666,"y":0},{"x":85.3833660996666,"y":2},{"x":97.5143516539875,"y":2},{"x":97.9143516539875,"y":1},{"x":97.5143516539875,"y":0}]}
,{
"name": "orf00027",
"orfname": "orf00027",
"gene_start": 11457,
"gene_end": 11585,
"gene_strand": "-",
"real_start": 115388,
"real_end": 115516 ,
"real_strand": "-",
"name": "orf00027",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     98.4785024361057,
"motifs":    "",
"function":  "",
"annotation":"",
"protein":"MSLLYQQVSDKVPHCFCYIFITPLPLLYCRGKKNINIFLSPT",
"dna":"ATGTCCCTACTTTATCAGCAAGTATCCGATAAAGTACCTCACTGTTTCTGTTACATTTTCATTACACCTTTGCCTCTGCTATATTGCAGAGGCAAAAAGAATATTAACATTTTTTTATCTCCAACA",
"points": [{"x":97.9314471322335,"y":1},{"x":98.3314471322335,"y":2},{"x":99.0255577399778,"y":2},{"x":99.0255577399778,"y":0},{"x":98.3314471322335,"y":0}]}
]}