{
"AOIs": [ 
{
"name": "NZ_CBVI0100001441.69.AOI_01",
"filename": "/data/pg-molgen/USERS/Vicky/Genomes_Bacteroidales/Bacteriodaceae/Bacteroides_timonensis/GCF_000513195.1_AP1_genomic.fna",
"color": "gray",
"yline": 10,
"xstart": 5,
"points": [ {"x":0,"y":10}, {"x":800,"y":10} ]
}
],
"Genes": [
{
"name": "orf00001",
"orfname": "orf00001",
"gene_start": 8,
"gene_end": 331,
"gene_strand": "+",
"real_start": 27028,
"real_end": 27351 ,
"real_strand": "+",
"name": "orf00001",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     1.38074291300098,
"motifs":    "",
"function":  "",
"annotation":"",
"protein":"MMLPNIETDWIDTFKNDFSNDTIDLLCRLLKQEDLSDTLKLQIADTLFQHDYINEEALCIKCRILCQQGKKGLAKTVYDAFCKEYAASLGTTYKYSLMEIIDEQNKN",
"dna":"ATGATGCTTCCTAACATTGAGACTGATTGGATCGATACATTCAAGAATGATTTCTCCAATGACACCATCGACTTGTTATGCCGATTATTAAAGCAGGAGGATCTTTCGGACACGCTGAAATTGCAGATAGCGGACACCCTATTCCAGCATGACTACATCAATGAGGAAGCCCTCTGCATAAAGTGCCGCATTCTTTGCCAACAGGGAAAGAAAGGACTTGCTAAAACCGTTTACGATGCTTTCTGTAAAGAATATGCAGCTTCATTGGGAACTACATACAAATATTCCCTAATGGAAATCATTGATGAACAGAACAAGAAC",
"points": [{"x":0.065167807103291,"y":0},{"x":0.065167807103291,"y":2},{"x":2.29631801889866,"y":2},{"x":2.69631801889866,"y":1},{"x":2.29631801889866,"y":0}]}
,{
"name": "orf00004",
"orfname": "orf00004",
"gene_start": 328,
"gene_end": 1527,
"gene_strand": "-",
"real_start": 27348,
"real_end": 28547 ,
"real_strand": "-",
"name": "orf00004",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     7.5553926360378,
"motifs":    "",
"function":  "",
"annotation":"",
"protein":"LLFSIGITAQAAGKQYNSYKGLVMAGYQGWFNAPDDGANRGWYHYTGHDGFRPGSCTIDFWPEVSEYKKLYKTEFKFADGTPAYTFSSHDESTVDTHFRWMKEYGLDGVFMQRFVGEIRGESGLKHFNTVLNSAMKAANKYERAICVMYDLSGMRPSDEDVLLKDIADVAKRHSLKDHAKNPSYLYHNGKPLVTVWGVGFNDHRRYGLDEAEKIINGLKAQGFSVMLGVPTHWRELSGDTESDPRLHELIKRCDVVMPWFVGRYNEDSYPRYQKLIKGDIEWAKKNKVDYAPLAFPGFSWRNMKGHENSVQIPRNKGSFLWKQLSGALKEGAEMLYVAMFDEIDEGTAIFKCAKKVPVGASTFVPIEEGIGGDHYLWLVGQAGKMLRKEIPLEMKQPVR",
"dna":"TTGTTGTTTTCAATAGGTATTACGGCGCAGGCTGCCGGTAAACAGTACAATTCGTACAAAGGATTGGTGATGGCCGGTTATCAGGGGTGGTTTAATGCCCCTGATGATGGCGCCAATCGGGGGTGGTATCACTATACCGGACACGATGGCTTTCGCCCCGGTTCTTGTACGATTGACTTCTGGCCGGAAGTATCGGAGTATAAAAAACTGTATAAGACGGAGTTCAAGTTTGCAGACGGAACGCCCGCCTATACTTTCTCTTCGCACGATGAGTCTACGGTAGATACTCATTTCAGATGGATGAAAGAATATGGATTGGATGGTGTGTTTATGCAGCGTTTTGTCGGGGAAATCCGTGGTGAGAGTGGTTTGAAGCATTTCAATACTGTTTTGAACTCTGCCATGAAAGCAGCCAATAAATACGAGCGTGCCATTTGTGTCATGTATGATTTAAGTGGTATGCGTCCCAGTGATGAGGATGTTTTGCTGAAAGATATTGCCGATGTGGCTAAACGTCATTCTCTGAAAGATCATGCCAAGAATCCCTCTTATCTGTATCATAATGGAAAACCGCTGGTTACGGTCTGGGGAGTAGGTTTCAATGATCACCGCCGTTACGGTCTGGATGAAGCCGAAAAGATTATCAATGGTTTGAAGGCACAGGGCTTTAGTGTGATGCTGGGAGTGCCTACGCACTGGCGCGAATTGAGTGGGGATACCGAATCGGACCCTCGTCTGCATGAGTTGATAAAACGGTGTGATGTTGTGATGCCCTGGTTTGTTGGACGGTATAATGAAGACTCGTATCCCCGTTATCAGAAACTGATTAAAGGTGACATCGAGTGGGCGAAAAAGAATAAAGTGGATTATGCACCTTTGGCTTTTCCGGGATTCTCCTGGCGTAATATGAAGGGGCACGAAAACAGTGTGCAGATACCGCGTAACAAAGGTTCGTTCCTTTGGAAGCAGTTGTCCGGAGCTCTGAAGGAAGGTGCGGAAATGCTTTATGTAGCTATGTTTGATGAGATAGATGAAGGTACGGCTATCTTTAAATGTGCTAAAAAGGTTCCCGTAGGTGCCAGTACATTTGTACCCATTGAGGAAGGCATTGGTGGTGATCATTATTTGTGGCTGGTGGGTCAGGCCGGTAAAATGTTGCGTAAGGAAATACCGTTGGAGATGAAGCAACCGGTACGT",
"points": [{"x":2.67188009123493,"y":1},{"x":3.07188009123493,"y":2},{"x":12.4389051808407,"y":2},{"x":12.4389051808407,"y":0},{"x":3.07188009123493,"y":0}]}
,{
"name": "orf00006",
"orfname": "orf00006",
"gene_start": 1596,
"gene_end": 4025,
"gene_strand": "-",
"real_start": 28616,
"real_end": 31045 ,
"real_strand": "-",
"name": "orf00006",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     22.8942652329749,
"motifs":    "",
"function":  "",
"annotation":"",
"protein":"MKNRLIGLCIVCACCLMAKADDLKLWYQQPAKVWTEALPLGNSRLGAMVYGGVVNEQIQLNEETVWGGGPHRNDSPKAFGVLPKVRELIFAGHEKEAEKVMADNFFTGQHGMPFQTIGSLMLEFDGHVDYSNYRRDLDLERAVASVRYKIGEVNYTRTIFTSLVDNALIIRIEADKPGAVNFTTRYSTPYKEYEIKKNGKSLLLSGHGSAHEGIPGAIRFETRTQIKAEKGKVNVTNDCIEVKGADAAVIYVTAATNFVNYKDVSANETRRATEFLAKAMKRPYAQALTAHEGAYQKLFGRVSLNIGPSSQEETSYRIKHFNERKDLGLVALMFQFGRYLLISSSQPGGQPAGLQGIWNHELLAPWDGKYTININTEMNYWPAEVTNLPEMHEPMFQMVKELSESAQGTARTLYDCRGWTVHHNTDLWRMAGPVDGASYVWPLGGAWLSQHLWQHYLYTGDQAFLKTAYPALKGAADFFLDFLVEHPKYGWMVCAPSMSPEQGPPGTGTMITAGCTMDTQIVLDALTSVLSATQLLYPANTSYRDSLQSMIKRLPPMQIGKYNQLQEWLADVDDPNNDHRHVSHLYGLYPSNQISPYAHPQLFQAAKRSLLYRGDMATGWSIGWKINLWARLLDGDHAYKIIKNMLKLVEKDNPDGRTYPNMFDAHPPFQIDGNFGFTAGVAEMLLQSHDEALHLLPALPQDWNKGSVKGLVARGAFEVDIDWDGGELTTATVTSRIGGNLRIRSYVPLEGVGLKEAKGDNPNPLMKRGDIKEPLVAAGLRAQYPLLYKIYEYDIQTQPGEKYTLHRAF",
"dna":"ATGAAAAACCGTTTGATAGGTCTGTGCATTGTCTGTGCTTGCTGCTTGATGGCTAAAGCTGATGACTTAAAACTCTGGTATCAGCAACCTGCCAAAGTATGGACCGAAGCATTACCTTTGGGTAATTCACGTTTGGGCGCCATGGTCTATGGCGGAGTAGTTAACGAACAGATACAGTTGAATGAGGAGACTGTCTGGGGCGGTGGCCCTCATCGCAACGATAGTCCGAAGGCATTCGGTGTATTGCCCAAGGTCAGGGAACTTATTTTTGCCGGACATGAGAAAGAAGCCGAAAAGGTTATGGCTGATAACTTCTTTACCGGGCAGCATGGCATGCCTTTCCAGACGATTGGCAGTTTGATGCTGGAATTTGATGGACATGTCGATTACTCCAATTATCGCAGGGATTTAGATTTGGAACGGGCGGTCGCATCCGTGCGGTATAAGATAGGCGAAGTGAATTATACCCGTACCATATTCACTTCTTTGGTAGATAATGCTTTGATCATCCGTATCGAGGCGGATAAACCCGGTGCAGTCAATTTTACAACCAGATATAGTACCCCGTATAAAGAGTACGAGATAAAGAAGAATGGCAAGAGCCTCCTGTTGTCCGGACATGGTTCGGCGCACGAAGGCATTCCTGGAGCTATTCGTTTTGAAACCCGCACACAGATAAAGGCGGAGAAGGGTAAAGTCAATGTCACCAATGATTGCATTGAAGTGAAAGGCGCAGATGCTGCTGTGATTTATGTGACGGCTGCAACCAACTTTGTCAATTATAAAGATGTAAGTGCCAATGAAACCCGTCGGGCAACGGAGTTTCTGGCAAAAGCCATGAAGCGCCCTTATGCCCAGGCGCTTACTGCTCATGAAGGAGCCTATCAAAAGCTTTTCGGACGTGTCTCTCTGAATATCGGCCCCTCCAGTCAGGAAGAAACATCTTACCGTATCAAGCATTTCAATGAAAGGAAAGATTTGGGCTTGGTGGCGTTGATGTTCCAGTTCGGGCGTTACCTACTTATATCCTCTTCGCAACCCGGCGGACAGCCTGCCGGACTGCAAGGCATCTGGAATCATGAACTATTGGCTCCGTGGGATGGAAAGTACACCATCAATATCAATACGGAGATGAACTACTGGCCGGCAGAAGTGACAAATCTCCCGGAAATGCATGAACCGATGTTCCAGATGGTGAAAGAATTGTCAGAGTCGGCACAAGGCACAGCACGCACCTTGTACGACTGCCGTGGGTGGACTGTACATCATAACACGGATCTGTGGCGTATGGCCGGACCTGTGGATGGTGCTTCGTATGTCTGGCCGTTGGGTGGCGCTTGGCTGAGCCAACATCTGTGGCAACATTATCTTTATACAGGCGATCAGGCATTCCTGAAAACTGCTTATCCGGCTTTGAAGGGGGCGGCTGATTTCTTCCTCGATTTCCTGGTGGAACATCCTAAATATGGCTGGATGGTCTGTGCTCCTTCTATGTCTCCCGAACAGGGCCCTCCGGGAACCGGTACAATGATTACTGCCGGATGTACGATGGACACTCAGATCGTGCTGGATGCGTTGACTTCCGTACTGTCGGCTACCCAACTGCTGTATCCAGCTAATACCTCCTATCGGGACAGTCTGCAAAGTATGATTAAGCGTTTGCCGCCTATGCAGATAGGTAAGTATAATCAGCTGCAGGAGTGGCTGGCGGATGTGGATGATCCGAATAATGACCATCGTCATGTTTCCCATTTGTACGGGCTTTATCCCAGTAATCAGATTTCCCCTTATGCGCATCCGCAGCTTTTCCAGGCAGCTAAACGCTCACTTCTCTATCGGGGTGACATGGCTACAGGGTGGTCAATCGGTTGGAAAATCAATCTGTGGGCACGTCTGCTCGACGGTGATCATGCTTATAAGATTATCAAGAATATGTTGAAGCTGGTGGAAAAGGATAATCCTGACGGACGTACTTATCCGAATATGTTTGACGCGCATCCGCCTTTCCAGATTGATGGAAACTTCGGTTTCACAGCCGGTGTAGCTGAGATGTTACTTCAAAGTCATGATGAGGCTTTACATTTATTGCCCGCCTTGCCTCAGGATTGGAACAAGGGTAGTGTAAAAGGTCTGGTAGCCCGCGGTGCTTTTGAAGTGGACATAGACTGGGATGGCGGTGAATTGACTACGGCTACCGTAACCTCACGCATTGGCGGCAATCTGCGTATACGTTCGTATGTGCCGTTGGAAGGTGTAGGTCTTAAGGAAGCGAAAGGTGATAATCCGAATCCGTTGATGAAGCGCGGAGATATTAAGGAACCGCTGGTCGCTGCCGGATTAAGGGCGCAATATCCTCTCTTGTATAAGATTTATGAGTATGATATACAGACACAACCGGGAGAAAAGTACACATTGCACAGAGCATTC",
"points": [{"x":13.0009775171066,"y":1},{"x":13.4009775171066,"y":2},{"x":32.7875529488433,"y":2},{"x":32.7875529488433,"y":0},{"x":13.4009775171066,"y":0}]}
,{
"name": "sORF_4",
"orfname": "sORF_4",
"gene_start": 4129,
"gene_end": 4227,
"gene_strand": "-",
"real_start": 31149,
"real_end": 31247 ,
"real_strand": "-",
"name": "sORF_4",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     34.0338872596937,
"motifs":    "RBS=ACTGATCTCGAAAATGTT<br>",
"function":  "",
"annotation":"",
"protein":"LFYKYLLFILEALIISDYRFVHNPTKMNYFRHx",
"dna":"TTGTTTTATAAATATTTATTATTTATATTAGAGGCGCTTATCATATCGGATTATCGTTTTGTTCATAACCCGACAAAAATGAATTATTTTCGACATTAA",
"points": [{"x":33.6347344411861,"y":1},{"x":34.0347344411861,"y":2},{"x":34.4330400782014,"y":2},{"x":34.4330400782014,"y":0},{"x":34.0347344411861,"y":0}]}
,{
"name": "sORF_1",
"orfname": "sORF_1",
"gene_start": 4548,
"gene_end": 4676,
"gene_strand": "+",
"real_start": 31568,
"real_end": 31696 ,
"real_strand": "+",
"name": "sORF_1",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     37.5692407950473,
"motifs":    "RBS=TAAACCTCCCCAAAACCT<br>",
"function":  "",
"annotation":"",
"protein":"VLGKVVTFATLSRYLSTPPLWGGAVEAILMMILCLRLRNEKWx",
"dna":"GTGTTAGGGAAAGTCGTTACCTTTGCCACCCTCAGTCGTTACCTTTCCACACCCCCTCTCTGGGGGGGTGCTGTAGAGGCGATTTTAATGATGATACTCTGTTTACGGCTAAGGAATGAGAAGTGGTAA",
"points": [{"x":37.0478983382209,"y":0},{"x":37.0478983382209,"y":2},{"x":37.6905832518736,"y":2},{"x":38.0905832518736,"y":1},{"x":37.6905832518736,"y":0}]}
,{
"name": "orf00008",
"orfname": "orf00008",
"gene_start": 4670,
"gene_end": 4795,
"gene_strand": "+",
"real_start": 31690,
"real_end": 31815 ,
"real_strand": "+",
"name": "orf00008",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     38.5508308895406,
"motifs":    "",
"function":  "",
"annotation":"",
"protein":"VVKKTGCMETNDLSFIIINIGNCSFLMDKAGIPDIIITFAG",
"dna":"GTGGTAAAAAAAACAGGATGTATGGAAACGAATGACCTGTCATTCATTATTATTAATATCGGAAATTGTTCATTTCTGATGGATAAAGCAGGCATTCCCGATATAATTATTACATTTGCAGGG",
"points": [{"x":38.0417073965461,"y":0},{"x":38.0417073965461,"y":2},{"x":38.659954382535,"y":2},{"x":39.059954382535,"y":1},{"x":38.659954382535,"y":0}]}
,{
"name": "orf00011",
"orfname": "orf00011",
"gene_start": 4818,
"gene_end": 6065,
"gene_strand": "+",
"real_start": 31838,
"real_end": 33085 ,
"real_strand": "+",
"name": "orf00011",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     44.3263277940697,
"motifs":    "",
"function":  "Gamma-glutamyl phosphate reductase OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) OX=226186 GN=proA PE=3 SV=1",
"annotation":"Species='-'<br>match=75.545%|Evalue=0.0<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|Q8A1E8|PROA_BACTN>sp|Q8A1E8|PROA_BACTN</a>",
"protein":"MDLNKVFATVQEASRELLSLSDKEINQILSAVADAALAKSDFILAENKKDLERMDPKDPKYDRLKLTVERLQGIAADTRNVATLPSPVGRTLKEHTHPQGMRLRKVSVPFGVIGIVYEARPNVSFDVFSLCLKSGNACILKGGSDADSSNRAIINVIHEVLEHFNINPHIVELLPADREATAELLNARGYVDLLIPRGSSSLINFVRQNATIPVIETGAGICHTFFDRYGDVEKGAAIINNAKTRRVSVCNALDCLLIDGDRLNDLPALCAPLQKSYVIIYADMYAYNALKGSYPAELLKEATEEDFGTEFLDYKMSIKTVQSIREAIAHIQKYGSKHSECIVTEDKARAEWFCRDVDAACVYVNVPTSFTDGAQFGLGAEIGISTQKLHARGPMALEELTTYKWIVEGEGQVRK",
"dna":"ATGGACTTAAACAAAGTATTTGCCACCGTGCAGGAAGCCAGCCGGGAATTGTTATCACTGAGCGATAAAGAAATCAATCAGATACTATCGGCTGTAGCGGACGCTGCCCTGGCAAAATCGGACTTCATCCTCGCTGAGAACAAGAAGGACCTGGAAAGAATGGATCCGAAAGATCCGAAATACGACCGGCTGAAACTGACCGTAGAACGCCTGCAAGGCATCGCTGCCGATACACGCAATGTAGCAACCCTTCCCTCACCAGTGGGACGCACGCTGAAAGAGCACACACATCCCCAGGGAATGAGGCTCAGAAAGGTAAGTGTCCCGTTTGGCGTCATCGGCATTGTATACGAAGCACGCCCCAACGTGAGTTTCGACGTATTCTCCCTCTGCCTGAAAAGCGGAAATGCCTGCATACTGAAAGGCGGTAGTGATGCCGACTCCTCCAACCGAGCCATTATCAACGTGATACACGAAGTACTGGAACATTTCAACATCAACCCGCACATCGTAGAATTACTGCCCGCCGACCGGGAAGCTACAGCCGAGTTGCTGAATGCCCGGGGGTATGTAGACTTACTTATTCCGCGTGGCAGCAGTAGCCTCATCAACTTTGTACGTCAAAATGCCACCATACCCGTCATTGAAACAGGCGCAGGTATCTGCCATACTTTCTTCGACCGCTACGGTGATGTAGAGAAAGGTGCAGCTATCATCAACAATGCCAAAACGCGCCGCGTCAGCGTATGCAATGCTCTGGACTGTCTGTTGATTGACGGTGACCGCCTCAACGATCTGCCGGCACTTTGCGCACCGTTGCAAAAAAGCTATGTGATAATCTATGCGGATATGTACGCATACAACGCACTGAAGGGAAGCTATCCTGCGGAGCTACTGAAGGAGGCTACGGAGGAAGACTTCGGTACGGAATTTCTGGACTACAAGATGTCCATTAAAACCGTTCAGTCCATTCGTGAAGCCATAGCACATATTCAGAAATACGGTTCCAAACACAGCGAATGTATTGTAACCGAAGATAAGGCCCGTGCCGAGTGGTTCTGTCGTGATGTGGACGCCGCCTGCGTATACGTCAACGTACCGACTTCCTTTACAGACGGAGCGCAGTTCGGTCTGGGTGCCGAAATCGGTATCAGCACGCAGAAGCTGCATGCCCGCGGTCCCATGGCTCTGGAAGAACTGACCACGTACAAGTGGATTGTCGAAGGAGAAGGACAGGTAAGGAAG",
"points": [{"x":39.247311827957,"y":0},{"x":39.247311827957,"y":2},{"x":49.0053437601825,"y":2},{"x":49.4053437601825,"y":1},{"x":49.0053437601825,"y":0}]}
,{
"name": "orf00013",
"orfname": "orf00013",
"gene_start": 6090,
"gene_end": 7043,
"gene_strand": "+",
"real_start": 33110,
"real_end": 34063 ,
"real_strand": "+",
"name": "orf00013",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     53.49055066797,
"motifs":    "",
"function":  "N-succinylornithine carbamoyltransferase OS=Bacteroides fragilis (strain 638R) OX=862962 GN=argF' PE=1 SV=1",
"annotation":"Species='-'<br>match=94.322%|Evalue=0.0<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|E1WKT5|SOTC_BACF6>sp|E1WKT5|SOTC_BACF6</a>",
"protein":"MKKFTCVQDIGNLKAALDEAFEIKKDRFKYVELGRNKTLMMIFFNSSLRTRLSTQKAATNLGMNVIVLDINQGAWKLETERGVIMDGDKPEHLLEAIPVMGCYCDIIGVRSFARFENKEDDYNEVIINQFIQHSGRPVFSMEAATRHPLQSFADLITIEEYKKTARPKVVMSWAPHPRPLPQAVPNSFAEWMNATDYDFVITHPEGYELAPQFVGNARVEYDQMKAFEGADFVYAKNWAAYAGDNYGQILSKDREWTVSDRQMAVTNNAYFMHCLPVRRNMIVTDDVIESPQSIVIPEAANREISATVVLKRLLESL",
"dna":"ATGAAGAAGTTTACTTGTGTGCAGGACATCGGAAACCTGAAAGCTGCACTGGATGAAGCATTTGAGATTAAGAAAGACCGTTTTAAATACGTAGAGTTGGGACGGAACAAGACGTTGATGATGATTTTCTTCAACTCCAGCTTACGTACCCGTCTCAGCACACAGAAAGCGGCTACGAATCTGGGTATGAATGTTATCGTGCTGGACATCAACCAGGGAGCATGGAAACTGGAGACGGAACGCGGTGTCATCATGGATGGAGACAAACCCGAACATCTACTGGAGGCTATTCCTGTGATGGGTTGCTACTGCGACATCATCGGTGTACGTTCGTTCGCCCGCTTCGAAAACAAAGAGGATGACTATAACGAGGTAATCATAAACCAGTTCATCCAACATTCCGGTCGCCCGGTGTTCTCAATGGAAGCAGCTACCCGCCATCCGTTGCAAAGCTTTGCCGACCTCATCACAATTGAAGAATACAAGAAGACGGCACGCCCTAAAGTGGTAATGAGCTGGGCACCGCATCCGCGCCCATTGCCCCAAGCCGTGCCTAATTCATTTGCCGAATGGATGAACGCCACGGATTATGATTTCGTCATCACCCATCCCGAAGGTTACGAACTTGCTCCGCAATTCGTAGGAAATGCCCGTGTGGAATATGATCAGATGAAAGCCTTCGAAGGCGCTGACTTCGTCTATGCCAAGAACTGGGCGGCTTATGCCGGAGATAATTACGGACAGATCCTAAGCAAAGATCGTGAATGGACCGTAAGCGACCGCCAGATGGCAGTAACCAACAATGCTTATTTCATGCACTGCCTGCCCGTGCGCCGCAATATGATTGTAACAGATGATGTCATCGAAAGTCCGCAATCTATTGTCATCCCCGAAGCGGCTAATCGTGAAATATCAGCTACGGTAGTATTAAAGAGACTGCTTGAGTCACTC",
"points": [{"x":49.6089931573803,"y":0},{"x":49.6089931573803,"y":2},{"x":56.9721081785598,"y":2},{"x":57.3721081785598,"y":1},{"x":56.9721081785598,"y":0}]}
,{
"name": "sORF_2",
"orfname": "sORF_2",
"gene_start": 7030,
"gene_end": 7125,
"gene_strand": "+",
"real_start": 34050,
"real_end": 34145 ,
"real_strand": "+",
"name": "sORF_2",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     57.6531443466927,
"motifs":    "RBS=GTATTAAAGAGACTGC<br>",
"function":  "",
"annotation":"",
"protein":"LSHSELNKELEGVRGVLTSLTPERSDNFFLLx",
"dna":"TTGAGTCACTCTGAACTGAATAAGGAGTTAGAAGGAGTTAGAGGAGTTCTAACTTCTTTAACTCCCGAGCGAAGTGATAACTTCTTTCTCCTTTAA",
"points": [{"x":57.2662104920169,"y":0},{"x":57.2662104920169,"y":2},{"x":57.6400782013685,"y":2},{"x":58.0400782013685,"y":1},{"x":57.6400782013685,"y":0}]}
,{
"name": "sORF_3",
"orfname": "sORF_3",
"gene_start": 7067,
"gene_end": 7198,
"gene_strand": "-",
"real_start": 34087,
"real_end": 34218 ,
"real_strand": "-",
"name": "sORF_3",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     58.1011730205279,
"motifs":    "RBS=CATAATCCTTGGCGTTGT<br>",
"function":  "",
"annotation":"",
"protein":"LGTKIMQTESSTKYACLFLMLRSFFKGERSYHFARELKKLELLx",
"dna":"TTGGGGACAAAGATAATGCAAACCGAAAGCAGTACAAAATATGCTTGCTTATTTTTGATGCTGAGGAGCTTTTTTAAAGGAGAAAGAAGTTATCACTTCGCTCGGGAGTTAAAGAAGTTAGAACTCCTCTAA",
"points": [{"x":57.5676115998697,"y":1},{"x":57.9676115998697,"y":2},{"x":58.6347344411861,"y":2},{"x":58.6347344411861,"y":0},{"x":57.9676115998697,"y":0}]}
,{
"name": "orf00015",
"orfname": "orf00015",
"gene_start": 7214,
"gene_end": 7855,
"gene_strand": "+",
"real_start": 34234,
"real_end": 34875 ,
"real_strand": "+",
"name": "orf00015",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     61.3758553274682,
"motifs":    "PF00069",
"function":  "Serine/threonine-protein kinase PK-1 OS=Streptomyces toyocaensis OX=55952 GN=spk1 PE=1 SV=1",
"annotation":"Species='-'<br>match=28.000%|Evalue=1.06e-06<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|Q9KIG4|PK1_STRTO>sp|Q9KIG4|PK1_STRTO</a>",
"protein":"MTIKEFFSFKQNKFFWINLIAMVIVVALVLFGVLKGLDIYTRHGEAVVVPNVKGMGVAEAEKMFRNQGLTCIVSDSSYVKNLPAGCILEHNPAAGQKVKEGRTIYLTINTLSTPLLIVPNVADNSSMRQAQAHLLAAGFKLSENERIAGEKDWVYGVKYKGRTLTNGEKVPVGATLTLIVGDGGELPQEGDSTAVEATTPTSSKDSAADESWF",
"dna":"ATGACTATAAAAGAGTTTTTTTCTTTCAAACAGAATAAGTTTTTCTGGATAAACCTGATCGCAATGGTCATTGTGGTTGCCCTTGTACTGTTTGGAGTGCTGAAGGGACTGGATATATACACCCGTCACGGTGAAGCGGTAGTAGTGCCCAACGTGAAAGGTATGGGAGTGGCAGAAGCCGAGAAAATGTTCCGTAACCAAGGCCTTACCTGCATCGTTTCCGACTCCAGCTACGTAAAGAACTTACCAGCCGGATGCATCCTCGAACACAATCCTGCCGCCGGGCAGAAAGTGAAGGAAGGACGCACCATCTATCTGACCATAAACACCCTGAGTACCCCTTTGCTAATCGTTCCCAATGTAGCGGACAACAGTTCCATGCGCCAAGCACAGGCACACCTGCTGGCGGCCGGCTTCAAACTGTCCGAGAACGAACGCATAGCCGGAGAAAAAGACTGGGTATACGGTGTGAAATATAAAGGCCGTACACTGACCAACGGTGAAAAAGTACCTGTAGGTGCCACACTTACACTAATTGTGGGAGACGGTGGAGAACTTCCTCAGGAAGGGGATTCTACAGCAGTAGAAGCTACCACCCCTACCTCCTCTAAAGATTCCGCAGCAGACGAGTCCTGGTTT",
"points": [{"x":58.7650700553926,"y":0},{"x":58.7650700553926,"y":2},{"x":63.5866405995438,"y":2},{"x":63.9866405995438,"y":1},{"x":63.5866405995438,"y":0}]}
,{
"name": "orf00017",
"orfname": "orf00017",
"gene_start": 7905,
"gene_end": 8978,
"gene_strand": "+",
"real_start": 34925,
"real_end": 35998 ,
"real_strand": "+",
"name": "orf00017",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     68.7642554578038,
"motifs":    "",
"function":  "Uncharacterized RNA pseudouridine synthase Cpar_0723 OS=Chlorobaculum parvum (strain NCIB 8327) OX=517417 GN=Cpar_0723 PE=3 SV=1",
"annotation":"Species='-'<br>match=47.040%|Evalue=1.09e-98<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|O50310|Y723_CHLP8>sp|O50310|Y723_CHLP8</a>",
"protein":"MIEDLPDDIVTEDDLDDIEPVGDEAQLYEHFRVVVDRGQEMMRVDKYLFDRLTNASRNRIQKSAEAGFVMANNKPVKSSYKVKPMDVITIMMDRPRYENEVIPEDIPLNIVYEDKYLMVVNKPAGLVVHPGHGNYQGTLVNAIAWHMKDNPDYDANDPHVGLVHRIDKDTSGLLVIAKTPDAKTNLGMQFFNKTTKRRYRALVWGTVEQDEGTITGNIGRNPRDRMQMTVLPDDQGKHAVTHYRVLERLGYVTLVECILETGRTHQIRVHMKHIGHVLFNDERYGGHEILKGTHFSKYKQFVNNCFDTCPRQALHAMTLGFVHPATGEKMYFTSEIPEDMTLLIDKWRGYISNRDLE",
"dna":"ATGATAGAAGATTTGCCGGACGACATAGTGACTGAGGATGATCTGGACGACATAGAACCTGTCGGTGATGAAGCCCAACTCTATGAACACTTCCGCGTGGTAGTGGATAGAGGACAGGAAATGATGCGCGTAGACAAATACCTGTTCGACCGCCTGACAAACGCTTCGCGCAACCGCATACAGAAATCAGCGGAAGCCGGTTTCGTAATGGCTAACAACAAACCAGTCAAGAGCAGCTACAAGGTGAAACCGATGGATGTCATCACCATCATGATGGATCGTCCGCGTTATGAAAACGAAGTCATTCCCGAAGATATTCCACTTAATATAGTCTACGAGGATAAATACCTCATGGTAGTGAACAAACCTGCCGGACTGGTGGTACACCCCGGGCATGGAAACTACCAGGGGACTTTAGTGAACGCCATCGCCTGGCACATGAAAGATAATCCTGACTACGATGCCAACGACCCGCACGTTGGTCTGGTTCATCGCATCGATAAAGACACTTCCGGGCTGCTCGTCATAGCCAAAACACCGGATGCCAAAACCAACCTCGGTATGCAGTTCTTCAACAAAACCACCAAACGACGCTACCGCGCCCTGGTGTGGGGAACCGTTGAACAGGACGAGGGAACCATCACCGGAAACATTGGCCGGAATCCCAGAGACCGCATGCAGATGACCGTTCTGCCCGATGATCAGGGAAAGCATGCCGTGACCCATTACCGGGTTCTGGAGCGTCTGGGCTATGTCACTCTTGTAGAATGCATTCTTGAAACGGGACGTACCCATCAGATACGTGTTCACATGAAACATATCGGCCATGTACTCTTCAATGATGAGCGCTACGGCGGTCACGAGATTCTGAAAGGTACCCATTTCAGTAAATACAAACAATTTGTAAATAACTGCTTCGATACTTGTCCACGGCAGGCATTACACGCCATGACACTGGGTTTTGTACATCCCGCCACCGGCGAAAAGATGTACTTCACCTCCGAAATACCCGAAGACATGACCTTGCTGATAGACAAATGGAGAGGCTACATCAGTAACAGAGATTTAGAA",
"points": [{"x":64.3939393939394,"y":0},{"x":64.3939393939394,"y":2},{"x":72.7345715216683,"y":2},{"x":73.1345715216683,"y":1},{"x":72.7345715216683,"y":0}]}
,{
"name": "orf00018",
"orfname": "orf00018",
"gene_start": 8975,
"gene_end": 9949,
"gene_strand": "+",
"real_start": 35995,
"real_end": 36969 ,
"real_strand": "+",
"name": "orf00018",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     77.0772238514174,
"motifs":    "",
"function":  "D-alanine--D-alanine ligase OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) OX=226186 GN=ddl PE=3 SV=1",
"annotation":"Species='-'<br>match=86.111%|Evalue=0.0<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|Q8A1F3|DDL_BACTN>sp|Q8A1F3|DDL_BACTN</a>",
"protein":"MKRTIAIVGGGDTSEFQVSLRSAQGIYSFINKEKYTLYIVEIHGLDWHVQLPDGGKAPIDRNDFSFQMNGRKVTFDFAYITIHGTPGEDGRLQGYFDLLHIPYSCCGVLAAALTYDKFACNQYLKVFGVRIAESLVLRQGQSISDEDVIEKIGLPCFIKPSLGGSSFGVTKVKTKEQIQPAIVKAFDEAQEVLIEAYMEGTEVTCGCYKTKEKSVVFPITEVVTENEFFDYDAKYNGQVSEITPARISDDLTHRIQTLTSAIYDILGASGIIRVDYIITAGDKVNLLEVNTTPGMTATSFIPQQVRAAGLDIKDVMTDIIENQF",
"dna":"ATGAAACGCACGATTGCTATTGTTGGCGGAGGCGATACCTCCGAATTTCAAGTTTCCCTGCGCAGCGCACAGGGAATCTACTCCTTTATCAATAAGGAAAAGTACACATTATATATTGTGGAGATACACGGACTCGACTGGCACGTGCAACTGCCCGACGGCGGCAAAGCGCCCATTGACCGGAATGACTTCAGTTTTCAGATGAATGGCAGGAAGGTAACATTCGACTTTGCCTACATCACCATTCACGGCACTCCGGGTGAGGACGGACGCTTGCAAGGCTATTTCGATCTCCTTCACATCCCCTACTCATGTTGTGGTGTACTGGCAGCAGCACTTACGTATGATAAGTTTGCCTGCAACCAATATCTCAAAGTTTTTGGAGTACGCATAGCAGAATCCTTAGTGCTTCGCCAGGGACAATCCATTTCCGATGAAGATGTGATTGAAAAGATAGGTTTGCCCTGTTTCATCAAACCCAGCCTAGGAGGTTCCAGCTTTGGCGTAACGAAAGTTAAGACGAAAGAACAAATACAGCCTGCCATTGTTAAGGCATTCGATGAAGCGCAAGAAGTTCTGATAGAAGCCTACATGGAAGGCACCGAAGTGACCTGCGGTTGTTATAAGACTAAAGAGAAGTCAGTCGTATTCCCTATCACCGAAGTAGTGACCGAAAATGAATTCTTCGACTACGACGCCAAGTACAACGGACAGGTTTCCGAAATCACCCCAGCCCGCATCTCCGATGACCTGACGCACCGGATACAGACACTGACTTCCGCCATTTACGATATCCTGGGCGCTTCAGGTATCATTCGTGTGGACTACATCATCACTGCCGGAGATAAAGTCAATCTGCTGGAAGTGAACACCACGCCCGGAATGACGGCTACCAGCTTCATACCCCAGCAAGTACGTGCCGCAGGATTAGACATTAAGGATGTAATGACTGATATAATCGAGAACCAGTTT",
"points": [{"x":73.1101335940046,"y":0},{"x":73.1101335940046,"y":2},{"x":80.6443141088302,"y":2},{"x":81.0443141088302,"y":1},{"x":80.6443141088302,"y":0}]}
,{
"name": "105.3;Nigrescin",
"orfname": "orf00019",
"gene_start": 9991,
"gene_end": 11148,
"gene_strand": "+",
"real_start": 37011,
"real_end": 38168 ,
"real_strand": "+",
"name": "105.3;Nigrescin",
"color":     "#70c947",
"yline":     10,
"angle":     -60,
"xtext":     86.0988921472792,
"motifs":    "",
"function":  "105.3;Nigrescin",
"annotation":"Evalue=6.45e-143 match=50.663%;",
"protein":"MNMEFDEIRPYHDEELPQIYEELIADPAFQQVASAVFPEVPFEALAQKMRTCKTKLEFQKAFCYTILKRFARDTTQGVTLDLTAQTDKTSAYTYISNHRDIILDSGFLSVELIDKGMDTVEIAIGDNLLIYPWIKKFVRVNKSFIVQRALTMRQMLESSGRMSRYMHHTIKDKNQSIWIAQREGRAKDSNDRTQESVLKMLAMGGEGDIIDRLIEMNILPLAISYEYDPCDYLKAQEFQQKRDIPDYKKTQEDDLKNMQTGLFGPKGRVHFQVASCINEELEKLDRSLSKPELFSLISALIDRRIHANYRMYPGNYIAHDYLSGTQAFAGHYTAEEKKHFTDYIDQQLTRIELPNKDIPFLREKMLLMYANPLTNYLATRTDNPK",
"dna":"ATGAATATGGAATTTGATGAAATCCGCCCTTATCATGACGAGGAGCTTCCTCAGATTTACGAGGAACTGATTGCCGATCCGGCTTTCCAGCAGGTGGCGTCTGCTGTTTTCCCGGAAGTTCCCTTTGAGGCACTTGCGCAGAAAATGCGTACATGCAAGACGAAGTTGGAGTTTCAGAAAGCATTCTGTTACACAATCCTGAAAAGATTTGCCAGAGATACGACACAGGGAGTAACTCTGGACCTTACGGCACAGACGGACAAGACATCCGCTTATACTTATATCTCCAACCACCGCGATATCATTCTCGACTCCGGTTTCCTGTCCGTAGAGTTGATAGACAAAGGTATGGATACAGTAGAAATTGCCATCGGCGATAACCTGCTGATCTATCCCTGGATTAAGAAGTTCGTGCGTGTCAACAAATCATTCATAGTACAACGTGCCCTGACCATGCGCCAAATGCTGGAATCTTCCGGACGCATGTCGCGCTATATGCACCACACTATTAAGGATAAGAACCAGTCCATCTGGATAGCTCAACGTGAAGGGCGTGCCAAAGACTCAAACGACCGTACTCAAGAAAGCGTTCTCAAGATGCTGGCTATGGGCGGTGAGGGTGACATCATCGACCGCCTGATTGAAATGAACATCCTTCCATTGGCCATTTCGTACGAATACGATCCTTGTGATTACCTGAAAGCACAGGAGTTCCAACAGAAACGCGATATACCGGACTACAAGAAGACGCAGGAAGACGACCTGAAGAATATGCAGACCGGCTTGTTCGGACCTAAAGGACGCGTGCACTTCCAGGTAGCATCGTGCATCAATGAAGAGCTGGAAAAGCTGGACCGTTCTCTTTCCAAACCCGAACTGTTTTCATTGATCTCCGCCCTTATAGATCGGAGAATCCATGCAAACTATCGTATGTATCCCGGCAATTACATAGCTCACGATTATTTGTCGGGCACCCAGGCCTTCGCCGGTCATTATACCGCCGAAGAGAAAAAACACTTCACTGACTACATCGACCAGCAACTTACACGCATTGAACTGCCCAATAAAGACATCCCGTTCCTGCGCGAAAAGATGTTGTTGATGTATGCCAATCCACTGACGAATTATTTGGCTACAAGAACTGATAATCCGAAA",
"points": [{"x":81.3864450961225,"y":0},{"x":81.3864450961225,"y":2},{"x":90.411339198436,"y":2},{"x":90.811339198436,"y":1},{"x":90.411339198436,"y":0}]}
,{
"name": "orf00020",
"orfname": "orf00020",
"gene_start": 11157,
"gene_end": 11846,
"gene_strand": "+",
"real_start": 38177,
"real_end": 38866 ,
"real_strand": "+",
"name": "orf00020",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     93.6909416748126,
"motifs":    "",
"function":  "",
"annotation":"",
"protein":"MKGKLQFPVSLCWFLPVLVFMLVSCGDDDDYHYPSVKLDFLTAQAGADGSLQSVLTDEGETLAIVEDASKTRIDANASARIVSNYGKAEAADGTSGVKLYAVLSAISPVPQSADKFKDGIKRDPADILSIWMGIDYLNIMLEIKSQNGKHSFHFIEDEVTTDKEAGTRTVRLSLYHDDGGDVQAYTKHAYASVPLRQYAEDGIDKVTIYFSLNTYSGKEVTYEFEYNPQ",
"dna":"ATGAAAGGTAAGCTACAATTTCCGGTTTCTTTATGCTGGTTTCTTCCCGTACTGGTATTCATGCTGGTTTCCTGCGGCGATGACGATGATTATCATTATCCGTCCGTAAAACTGGACTTCCTGACTGCACAGGCCGGTGCCGACGGCAGCCTGCAATCCGTGCTGACGGATGAAGGCGAAACACTTGCAATAGTGGAAGACGCGTCGAAAACACGTATAGACGCTAATGCCTCTGCCCGCATTGTCAGCAACTATGGCAAGGCGGAAGCTGCCGATGGGACATCCGGAGTGAAATTGTATGCAGTATTGAGTGCCATATCGCCTGTACCGCAGTCTGCGGATAAATTTAAGGATGGAATCAAGCGTGATCCGGCAGATATACTGAGTATCTGGATGGGGATTGATTACCTGAACATAATGCTGGAAATCAAGTCGCAGAACGGAAAGCACTCGTTCCATTTCATTGAGGACGAAGTCACCACGGATAAAGAAGCAGGAACCCGGACGGTACGTCTGTCTCTCTATCATGATGATGGCGGAGATGTGCAGGCATACACGAAACATGCATATGCATCCGTTCCGTTACGGCAATATGCAGAGGATGGAATTGATAAAGTTACAATCTATTTCAGCTTAAACACGTATTCCGGCAAAGAAGTAACTTATGAATTTGAATATAATCCCCAG",
"points": [{"x":90.8846529814272,"y":0},{"x":90.8846529814272,"y":2},{"x":96.0972303681981,"y":2},{"x":96.4972303681981,"y":1},{"x":96.0972303681981,"y":0}]}
,{
"name": "orf00021",
"orfname": "orf00021",
"gene_start": 11848,
"gene_end": 12237,
"gene_strand": "+",
"real_start": 38868,
"real_end": 39257 ,
"real_strand": "+",
"name": "orf00021",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     98.0979146301727,
"motifs":    "",
"function":  "Sulfurtransferase Alvin_2599 OS=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D) OX=572477 GN=rhd_2599 PE=1 SV=1",
"annotation":"Species='-'<br>match=35.714%|Evalue=1.42e-10<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|D3RPB9|RHODA_ALLVD>sp|D3RPB9|RHODA_ALLVD</a>",
"protein":"MKINSLIAGICLFFSSLFSCQQKGDFKSVSVEDFSTLIANPEIQRLDVRTVAEYSESHIPKSININVLDKTFAEIADSTLQKDKPVALYCRSGKRSKKAAAILSEKGYVVYDLDKGFEEWKKAGKEIEE",
"dna":"ATGAAAATAAATTCTTTGATTGCAGGCATCTGTCTATTCTTCTCCTCTCTTTTCTCCTGTCAGCAGAAAGGAGATTTCAAGTCTGTATCCGTGGAAGATTTCTCCACGCTGATAGCCAATCCTGAGATACAGCGTCTGGATGTACGCACCGTAGCCGAATACTCGGAGTCACACATTCCCAAAAGCATCAACATCAATGTGCTTGATAAGACTTTTGCGGAAATAGCCGACTCCACTCTACAGAAAGATAAACCCGTTGCTTTGTATTGTCGTAGTGGTAAACGCAGTAAAAAGGCTGCCGCTATACTCAGCGAAAAGGGATACGTGGTTTACGACCTCGACAAAGGTTTCGAAGAATGGAAAAAAGCCGGAAAGGAAATAGAGGAA",
"points": [{"x":96.5135223199739,"y":0},{"x":96.5135223199739,"y":2},{"x":99.2823069403715,"y":2},{"x":99.6823069403715,"y":1},{"x":99.2823069403715,"y":0}]}
]}