/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_ABJL020000061.0.fna -queryname NZ_ABJL020000061.0
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_ABJL020000061.0.fna -queryname NZ_ABJL020000061.0
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_ABJL020000061.0.fna -queryname NZ_ABJL020000061.0
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_ABJL020000061.0.AOI.fna -queryname NZ_ABJL020000061.0
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_ABJL020000061.0.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_ABJL020000061.0.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -queryname NZ_ABJL020000061.0
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -table NZ_ABJL020000061.0.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002421.9.fna -queryname NZ_CDQQ010002421.9
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002421.9.fna -queryname NZ_CDQQ010002421.9
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002421.9.fna -queryname NZ_CDQQ010002421.9
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000131.99.fna -queryname NZ_CDQQ010000131.99
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000131.99.fna -queryname NZ_CDQQ010000131.99
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000131.99.fna -queryname NZ_CDQQ010000131.99
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000021.999.fna -queryname NZ_QSFN010000021.999
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000021.999.fna -queryname NZ_QSFN010000021.999
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000021.999.fna -queryname NZ_QSFN010000021.999
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000131.1000.fna -queryname NZ_QSFN010000131.1000
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000131.1000.fna -queryname NZ_QSFN010000131.1000
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000131.1000.fna -queryname NZ_QSFN010000131.1000
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000191.1001.fna -queryname NZ_QSFN010000191.1001
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000191.1001.fna -queryname NZ_QSFN010000191.1001
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000191.1001.fna -queryname NZ_QSFN010000191.1001
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000331.1002.fna -queryname NZ_QSFN010000331.1002
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000331.1002.fna -queryname NZ_QSFN010000331.1002
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000331.1002.fna -queryname NZ_QSFN010000331.1002
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000271.1003.fna -queryname NZ_QSFN010000271.1003
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000271.1003.fna -queryname NZ_QSFN010000271.1003
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000271.1003.fna -queryname NZ_QSFN010000271.1003
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000011.1004.fna -queryname NZ_QSFN010000011.1004
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000011.1004.fna -queryname NZ_QSFN010000011.1004
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000011.1004.fna -queryname NZ_QSFN010000011.1004
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000011.1004.AOI.fna -queryname NZ_QSFN010000011.1004
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000011.1004.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000011.1004.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -queryname NZ_QSFN010000011.1004
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -table NZ_QSFN010000011.1004.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000141.1005.fna -queryname NZ_QSFN010000141.1005
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000141.1005.fna -queryname NZ_QSFN010000141.1005
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000141.1005.fna -queryname NZ_QSFN010000141.1005
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000141.1005.AOI.fna -queryname NZ_QSFN010000141.1005
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000141.1005.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000141.1005.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -queryname NZ_QSFN010000141.1005
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -table NZ_QSFN010000141.1005.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000301.1006.fna -queryname NZ_QSFN010000301.1006
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000301.1006.fna -queryname NZ_QSFN010000301.1006
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000301.1006.fna -queryname NZ_QSFN010000301.1006
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000321.1007.fna -queryname NZ_QSFN010000321.1007
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000321.1007.fna -queryname NZ_QSFN010000321.1007
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000321.1007.fna -queryname NZ_QSFN010000321.1007
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000181.1008.fna -queryname NZ_QSFN010000181.1008
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000181.1008.fna -queryname NZ_QSFN010000181.1008
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000181.1008.fna -queryname NZ_QSFN010000181.1008
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003261.100.fna -queryname NZ_CDQQ010003261.100
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003261.100.fna -queryname NZ_CDQQ010003261.100
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003261.100.fna -queryname NZ_CDQQ010003261.100
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000371.1009.fna -queryname NZ_QSFN010000371.1009
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000371.1009.fna -queryname NZ_QSFN010000371.1009
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000371.1009.fna -queryname NZ_QSFN010000371.1009
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000251.1010.fna -queryname NZ_QSKV010000251.1010
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000251.1010.fna -queryname NZ_QSKV010000251.1010
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000251.1010.fna -queryname NZ_QSKV010000251.1010
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000121.1011.fna -queryname NZ_QSKV010000121.1011
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000121.1011.fna -queryname NZ_QSKV010000121.1011
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000121.1011.fna -queryname NZ_QSKV010000121.1011
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000081.1012.fna -queryname NZ_QSKV010000081.1012
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000081.1012.fna -queryname NZ_QSKV010000081.1012
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000081.1012.fna -queryname NZ_QSKV010000081.1012
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000031.1013.fna -queryname NZ_QSKV010000031.1013
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000031.1013.fna -queryname NZ_QSKV010000031.1013
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000031.1013.fna -queryname NZ_QSKV010000031.1013
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000341.1014.fna -queryname NZ_QSKV010000341.1014
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000341.1014.fna -queryname NZ_QSKV010000341.1014
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000341.1014.fna -queryname NZ_QSKV010000341.1014
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000091.1015.fna -queryname NZ_QSKV010000091.1015
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000091.1015.fna -queryname NZ_QSKV010000091.1015
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000091.1015.fna -queryname NZ_QSKV010000091.1015
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000091.1015.AOI.fna -queryname NZ_QSKV010000091.1015
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000091.1015.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000091.1015.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -queryname NZ_QSKV010000091.1015
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -table NZ_QSKV010000091.1015.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000151.1016.fna -queryname NZ_QSKV010000151.1016
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000151.1016.fna -queryname NZ_QSKV010000151.1016
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000151.1016.fna -queryname NZ_QSKV010000151.1016
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000281.1017.fna -queryname NZ_QSKV010000281.1017
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000281.1017.fna -queryname NZ_QSKV010000281.1017
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000281.1017.fna -queryname NZ_QSKV010000281.1017
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000271.1018.fna -queryname NZ_QSKV010000271.1018
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000271.1018.fna -queryname NZ_QSKV010000271.1018
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000271.1018.fna -queryname NZ_QSKV010000271.1018
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000331.101.fna -queryname NZ_CDQQ010000331.101
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000331.101.fna -queryname NZ_CDQQ010000331.101
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000331.101.fna -queryname NZ_CDQQ010000331.101
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000361.1019.fna -queryname NZ_QSKV010000361.1019
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000361.1019.fna -queryname NZ_QSKV010000361.1019
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000361.1019.fna -queryname NZ_QSKV010000361.1019
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000221.1020.fna -queryname NZ_QSKV010000221.1020
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000221.1020.fna -queryname NZ_QSKV010000221.1020
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000221.1020.fna -queryname NZ_QSKV010000221.1020
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000181.1021.fna -queryname NZ_QSKV010000181.1021
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000181.1021.fna -queryname NZ_QSKV010000181.1021
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000181.1021.fna -queryname NZ_QSKV010000181.1021
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000111.1022.fna -queryname NZ_QSKV010000111.1022
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000111.1022.fna -queryname NZ_QSKV010000111.1022
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000111.1022.fna -queryname NZ_QSKV010000111.1022
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000041.1023.fna -queryname NZ_QSKV010000041.1023
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000041.1023.fna -queryname NZ_QSKV010000041.1023
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000041.1023.fna -queryname NZ_QSKV010000041.1023
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000311.1024.fna -queryname NZ_QSKV010000311.1024
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000311.1024.fna -queryname NZ_QSKV010000311.1024
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000311.1024.fna -queryname NZ_QSKV010000311.1024
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000061.1025.fna -queryname NZ_QSKV010000061.1025
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000061.1025.fna -queryname NZ_QSKV010000061.1025
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000061.1025.fna -queryname NZ_QSKV010000061.1025
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000331.1026.fna -queryname NZ_QSKV010000331.1026
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000331.1026.fna -queryname NZ_QSKV010000331.1026
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000331.1026.fna -queryname NZ_QSKV010000331.1026
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000161.1027.fna -queryname NZ_QSKV010000161.1027
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000161.1027.fna -queryname NZ_QSKV010000161.1027
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000161.1027.fna -queryname NZ_QSKV010000161.1027
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000191.1028.fna -queryname NZ_QSKV010000191.1028
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000191.1028.fna -queryname NZ_QSKV010000191.1028
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000191.1028.fna -queryname NZ_QSKV010000191.1028
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000851.102.fna -queryname NZ_CDQQ010000851.102
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000851.102.fna -queryname NZ_CDQQ010000851.102
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000851.102.fna -queryname NZ_CDQQ010000851.102
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000211.1029.fna -queryname NZ_QSKV010000211.1029
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000211.1029.fna -queryname NZ_QSKV010000211.1029
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000211.1029.fna -queryname NZ_QSKV010000211.1029
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000171.1030.fna -queryname NZ_QSKV010000171.1030
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000171.1030.fna -queryname NZ_QSKV010000171.1030
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000171.1030.fna -queryname NZ_QSKV010000171.1030
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000141.1031.fna -queryname NZ_QSKV010000141.1031
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000141.1031.fna -queryname NZ_QSKV010000141.1031
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000141.1031.fna -queryname NZ_QSKV010000141.1031
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000261.1032.fna -queryname NZ_QSKV010000261.1032
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000261.1032.fna -queryname NZ_QSKV010000261.1032
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000261.1032.fna -queryname NZ_QSKV010000261.1032
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000101.1033.fna -queryname NZ_QSKV010000101.1033
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000101.1033.fna -queryname NZ_QSKV010000101.1033
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000101.1033.fna -queryname NZ_QSKV010000101.1033
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000021.1034.fna -queryname NZ_QSKV010000021.1034
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000021.1034.fna -queryname NZ_QSKV010000021.1034
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000021.1034.fna -queryname NZ_QSKV010000021.1034
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000351.1035.fna -queryname NZ_QSKV010000351.1035
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000351.1035.fna -queryname NZ_QSKV010000351.1035
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000351.1035.fna -queryname NZ_QSKV010000351.1035
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000131.1036.fna -queryname NZ_QSKV010000131.1036
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000131.1036.fna -queryname NZ_QSKV010000131.1036
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000131.1036.fna -queryname NZ_QSKV010000131.1036
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000291.1037.fna -queryname NZ_QSKV010000291.1037
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000291.1037.fna -queryname NZ_QSKV010000291.1037
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000291.1037.fna -queryname NZ_QSKV010000291.1037
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000301.1038.fna -queryname NZ_QSKV010000301.1038
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000301.1038.fna -queryname NZ_QSKV010000301.1038
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000301.1038.fna -queryname NZ_QSKV010000301.1038
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005121.103.fna -queryname NZ_CDQQ010005121.103
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005121.103.fna -queryname NZ_CDQQ010005121.103
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005121.103.fna -queryname NZ_CDQQ010005121.103
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000231.1039.fna -queryname NZ_QSKV010000231.1039
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000231.1039.fna -queryname NZ_QSKV010000231.1039
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000231.1039.fna -queryname NZ_QSKV010000231.1039
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000071.1040.fna -queryname NZ_QSKV010000071.1040
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000071.1040.fna -queryname NZ_QSKV010000071.1040
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000071.1040.fna -queryname NZ_QSKV010000071.1040
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000241.1041.fna -queryname NZ_QSKV010000241.1041
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000241.1041.fna -queryname NZ_QSKV010000241.1041
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000241.1041.fna -queryname NZ_QSKV010000241.1041
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000051.1042.fna -queryname NZ_QSKV010000051.1042
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000051.1042.fna -queryname NZ_QSKV010000051.1042
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000051.1042.fna -queryname NZ_QSKV010000051.1042
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000051.1042.AOI.fna -queryname NZ_QSKV010000051.1042
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000051.1042.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000051.1042.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -queryname NZ_QSKV010000051.1042
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -table NZ_QSKV010000051.1042.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000321.1043.fna -queryname NZ_QSKV010000321.1043
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000321.1043.fna -queryname NZ_QSKV010000321.1043
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000321.1043.fna -queryname NZ_QSKV010000321.1043
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000201.1044.fna -queryname NZ_QSKV010000201.1044
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000201.1044.fna -queryname NZ_QSKV010000201.1044
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000201.1044.fna -queryname NZ_QSKV010000201.1044
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000011.1045.fna -queryname NZ_QSKV010000011.1045
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000011.1045.fna -queryname NZ_QSKV010000011.1045
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSKV010000011.1045.fna -queryname NZ_QSKV010000011.1045
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000261.1046.fna -queryname NZ_QRKQ010000261.1046
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000261.1046.fna -queryname NZ_QRKQ010000261.1046
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000261.1046.fna -queryname NZ_QRKQ010000261.1046
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000081.1047.fna -queryname NZ_QRKQ010000081.1047
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000081.1047.fna -queryname NZ_QRKQ010000081.1047
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000081.1047.fna -queryname NZ_QRKQ010000081.1047
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000161.1048.fna -queryname NZ_QRKQ010000161.1048
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000161.1048.fna -queryname NZ_QRKQ010000161.1048
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000161.1048.fna -queryname NZ_QRKQ010000161.1048
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004921.104.fna -queryname NZ_CDQQ010004921.104
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004921.104.fna -queryname NZ_CDQQ010004921.104
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004921.104.fna -queryname NZ_CDQQ010004921.104
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000181.1049.fna -queryname NZ_QRKQ010000181.1049
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000181.1049.fna -queryname NZ_QRKQ010000181.1049
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000181.1049.fna -queryname NZ_QRKQ010000181.1049
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000031.1050.fna -queryname NZ_QRKQ010000031.1050
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000031.1050.fna -queryname NZ_QRKQ010000031.1050
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000031.1050.fna -queryname NZ_QRKQ010000031.1050
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000011.1051.fna -queryname NZ_QRKQ010000011.1051
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000011.1051.fna -queryname NZ_QRKQ010000011.1051
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000011.1051.fna -queryname NZ_QRKQ010000011.1051
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000371.1052.fna -queryname NZ_QRKQ010000371.1052
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000371.1052.fna -queryname NZ_QRKQ010000371.1052
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000371.1052.fna -queryname NZ_QRKQ010000371.1052
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000091.1053.fna -queryname NZ_QRKQ010000091.1053
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000091.1053.fna -queryname NZ_QRKQ010000091.1053
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000091.1053.fna -queryname NZ_QRKQ010000091.1053
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000351.1054.fna -queryname NZ_QRKQ010000351.1054
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000351.1054.fna -queryname NZ_QRKQ010000351.1054
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000351.1054.fna -queryname NZ_QRKQ010000351.1054
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000191.1055.fna -queryname NZ_QRKQ010000191.1055
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000191.1055.fna -queryname NZ_QRKQ010000191.1055
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000191.1055.fna -queryname NZ_QRKQ010000191.1055
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000041.1056.fna -queryname NZ_QRKQ010000041.1056
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000041.1056.fna -queryname NZ_QRKQ010000041.1056
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000041.1056.fna -queryname NZ_QRKQ010000041.1056
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000131.1057.fna -queryname NZ_QRKQ010000131.1057
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000131.1057.fna -queryname NZ_QRKQ010000131.1057
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000131.1057.fna -queryname NZ_QRKQ010000131.1057
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000141.1058.fna -queryname NZ_QRKQ010000141.1058
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000141.1058.fna -queryname NZ_QRKQ010000141.1058
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000141.1058.fna -queryname NZ_QRKQ010000141.1058
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002211.105.fna -queryname NZ_CDQQ010002211.105
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002211.105.fna -queryname NZ_CDQQ010002211.105
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002211.105.fna -queryname NZ_CDQQ010002211.105
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000361.1059.fna -queryname NZ_QRKQ010000361.1059
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000361.1059.fna -queryname NZ_QRKQ010000361.1059
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000361.1059.fna -queryname NZ_QRKQ010000361.1059
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000331.1060.fna -queryname NZ_QRKQ010000331.1060
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000331.1060.fna -queryname NZ_QRKQ010000331.1060
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000331.1060.fna -queryname NZ_QRKQ010000331.1060
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000341.1061.fna -queryname NZ_QRKQ010000341.1061
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000341.1061.fna -queryname NZ_QRKQ010000341.1061
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000341.1061.fna -queryname NZ_QRKQ010000341.1061
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000381.1062.fna -queryname NZ_QRKQ010000381.1062
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000381.1062.fna -queryname NZ_QRKQ010000381.1062
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000381.1062.fna -queryname NZ_QRKQ010000381.1062
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000171.1063.fna -queryname NZ_QRKQ010000171.1063
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000171.1063.fna -queryname NZ_QRKQ010000171.1063
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000171.1063.fna -queryname NZ_QRKQ010000171.1063
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000251.1064.fna -queryname NZ_QRKQ010000251.1064
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000251.1064.fna -queryname NZ_QRKQ010000251.1064
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000251.1064.fna -queryname NZ_QRKQ010000251.1064
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000281.1065.fna -queryname NZ_QRKQ010000281.1065
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000281.1065.fna -queryname NZ_QRKQ010000281.1065
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000281.1065.fna -queryname NZ_QRKQ010000281.1065
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000061.1066.fna -queryname NZ_QRKQ010000061.1066
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000061.1066.fna -queryname NZ_QRKQ010000061.1066
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000061.1066.fna -queryname NZ_QRKQ010000061.1066
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000061.1066.AOI.fna -queryname NZ_QRKQ010000061.1066
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000061.1066.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000061.1066.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -queryname NZ_QRKQ010000061.1066
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -table NZ_QRKQ010000061.1066.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000021.1067.fna -queryname NZ_QRKQ010000021.1067
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000021.1067.fna -queryname NZ_QRKQ010000021.1067
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000021.1067.fna -queryname NZ_QRKQ010000021.1067
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000071.1068.fna -queryname NZ_QRKQ010000071.1068
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000071.1068.fna -queryname NZ_QRKQ010000071.1068
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000071.1068.fna -queryname NZ_QRKQ010000071.1068
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004651.106.fna -queryname NZ_CDQQ010004651.106
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004651.106.fna -queryname NZ_CDQQ010004651.106
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004651.106.fna -queryname NZ_CDQQ010004651.106
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000321.1069.fna -queryname NZ_QRKQ010000321.1069
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000321.1069.fna -queryname NZ_QRKQ010000321.1069
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000321.1069.fna -queryname NZ_QRKQ010000321.1069
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000311.1070.fna -queryname NZ_QRKQ010000311.1070
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000311.1070.fna -queryname NZ_QRKQ010000311.1070
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000311.1070.fna -queryname NZ_QRKQ010000311.1070
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000211.1071.fna -queryname NZ_QRKQ010000211.1071
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000211.1071.fna -queryname NZ_QRKQ010000211.1071
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000211.1071.fna -queryname NZ_QRKQ010000211.1071
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000221.1072.fna -queryname NZ_QRKQ010000221.1072
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000221.1072.fna -queryname NZ_QRKQ010000221.1072
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000221.1072.fna -queryname NZ_QRKQ010000221.1072
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000201.1073.fna -queryname NZ_QRKQ010000201.1073
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000201.1073.fna -queryname NZ_QRKQ010000201.1073
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000201.1073.fna -queryname NZ_QRKQ010000201.1073
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000101.1074.fna -queryname NZ_QRKQ010000101.1074
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000101.1074.fna -queryname NZ_QRKQ010000101.1074
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000101.1074.fna -queryname NZ_QRKQ010000101.1074
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000271.1075.fna -queryname NZ_QRKQ010000271.1075
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000271.1075.fna -queryname NZ_QRKQ010000271.1075
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000271.1075.fna -queryname NZ_QRKQ010000271.1075
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000231.1076.fna -queryname NZ_QRKQ010000231.1076
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000231.1076.fna -queryname NZ_QRKQ010000231.1076
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000231.1076.fna -queryname NZ_QRKQ010000231.1076
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000121.1077.fna -queryname NZ_QRKQ010000121.1077
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000121.1077.fna -queryname NZ_QRKQ010000121.1077
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000121.1077.fna -queryname NZ_QRKQ010000121.1077
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000301.1078.fna -queryname NZ_QRKQ010000301.1078
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000301.1078.fna -queryname NZ_QRKQ010000301.1078
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000301.1078.fna -queryname NZ_QRKQ010000301.1078
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003001.107.fna -queryname NZ_CDQQ010003001.107
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003001.107.fna -queryname NZ_CDQQ010003001.107
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003001.107.fna -queryname NZ_CDQQ010003001.107
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000111.1079.fna -queryname NZ_QRKQ010000111.1079
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000111.1079.fna -queryname NZ_QRKQ010000111.1079
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000111.1079.fna -queryname NZ_QRKQ010000111.1079
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000051.1080.fna -queryname NZ_QRKQ010000051.1080
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000051.1080.fna -queryname NZ_QRKQ010000051.1080
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000051.1080.fna -queryname NZ_QRKQ010000051.1080
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000051.1080.AOI.fna -queryname NZ_QRKQ010000051.1080
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000051.1080.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000051.1080.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -queryname NZ_QRKQ010000051.1080
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -table NZ_QRKQ010000051.1080.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000151.1081.fna -queryname NZ_QRKQ010000151.1081
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000151.1081.fna -queryname NZ_QRKQ010000151.1081
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000151.1081.fna -queryname NZ_QRKQ010000151.1081
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000241.1082.fna -queryname NZ_QRKQ010000241.1082
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000241.1082.fna -queryname NZ_QRKQ010000241.1082
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000241.1082.fna -queryname NZ_QRKQ010000241.1082
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000391.1083.fna -queryname NZ_QRKQ010000391.1083
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000391.1083.fna -queryname NZ_QRKQ010000391.1083
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000391.1083.fna -queryname NZ_QRKQ010000391.1083
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000291.1084.fna -queryname NZ_QRKQ010000291.1084
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000291.1084.fna -queryname NZ_QRKQ010000291.1084
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRKQ010000291.1084.fna -queryname NZ_QRKQ010000291.1084
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000031.1085.fna -queryname NZ_QRPE010000031.1085
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000031.1085.fna -queryname NZ_QRPE010000031.1085
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000031.1085.fna -queryname NZ_QRPE010000031.1085
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000501.1086.fna -queryname NZ_QRPE010000501.1086
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000501.1086.fna -queryname NZ_QRPE010000501.1086
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000501.1086.fna -queryname NZ_QRPE010000501.1086
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000481.1087.fna -queryname NZ_QRPE010000481.1087
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000481.1087.fna -queryname NZ_QRPE010000481.1087
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000481.1087.fna -queryname NZ_QRPE010000481.1087
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000061.1088.fna -queryname NZ_QRPE010000061.1088
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000061.1088.fna -queryname NZ_QRPE010000061.1088
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000061.1088.fna -queryname NZ_QRPE010000061.1088
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002441.108.fna -queryname NZ_CDQQ010002441.108
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002441.108.fna -queryname NZ_CDQQ010002441.108
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002441.108.fna -queryname NZ_CDQQ010002441.108
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000321.1089.fna -queryname NZ_QRPE010000321.1089
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000321.1089.fna -queryname NZ_QRPE010000321.1089
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000321.1089.fna -queryname NZ_QRPE010000321.1089
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000131.1090.fna -queryname NZ_QRPE010000131.1090
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000131.1090.fna -queryname NZ_QRPE010000131.1090
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000131.1090.fna -queryname NZ_QRPE010000131.1090
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000371.1091.fna -queryname NZ_QRPE010000371.1091
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000371.1091.fna -queryname NZ_QRPE010000371.1091
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000371.1091.fna -queryname NZ_QRPE010000371.1091
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000561.1092.fna -queryname NZ_QRPE010000561.1092
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000561.1092.fna -queryname NZ_QRPE010000561.1092
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000561.1092.fna -queryname NZ_QRPE010000561.1092
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000651.1093.fna -queryname NZ_QRPE010000651.1093
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000651.1093.fna -queryname NZ_QRPE010000651.1093
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000651.1093.fna -queryname NZ_QRPE010000651.1093
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000441.1094.fna -queryname NZ_QRPE010000441.1094
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000441.1094.fna -queryname NZ_QRPE010000441.1094
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000441.1094.fna -queryname NZ_QRPE010000441.1094
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000601.1095.fna -queryname NZ_QRPE010000601.1095
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000601.1095.fna -queryname NZ_QRPE010000601.1095
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000601.1095.fna -queryname NZ_QRPE010000601.1095
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000071.1096.fna -queryname NZ_QRPE010000071.1096
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000071.1096.fna -queryname NZ_QRPE010000071.1096
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000071.1096.fna -queryname NZ_QRPE010000071.1096
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000081.1097.fna -queryname NZ_QRPE010000081.1097
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000081.1097.fna -queryname NZ_QRPE010000081.1097
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000081.1097.fna -queryname NZ_QRPE010000081.1097
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000521.1098.fna -queryname NZ_QRPE010000521.1098
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000521.1098.fna -queryname NZ_QRPE010000521.1098
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000521.1098.fna -queryname NZ_QRPE010000521.1098
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002081.10.fna -queryname NZ_CDQQ010002081.10
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002081.10.fna -queryname NZ_CDQQ010002081.10
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002081.10.fna -queryname NZ_CDQQ010002081.10
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002151.109.fna -queryname NZ_CDQQ010002151.109
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002151.109.fna -queryname NZ_CDQQ010002151.109
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002151.109.fna -queryname NZ_CDQQ010002151.109
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000281.1099.fna -queryname NZ_QRPE010000281.1099
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000281.1099.fna -queryname NZ_QRPE010000281.1099
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000281.1099.fna -queryname NZ_QRPE010000281.1099
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000261.1100.fna -queryname NZ_QRPE010000261.1100
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000261.1100.fna -queryname NZ_QRPE010000261.1100
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000261.1100.fna -queryname NZ_QRPE010000261.1100
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000631.1101.fna -queryname NZ_QRPE010000631.1101
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000631.1101.fna -queryname NZ_QRPE010000631.1101
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000631.1101.fna -queryname NZ_QRPE010000631.1101
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000471.1102.fna -queryname NZ_QRPE010000471.1102
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000471.1102.fna -queryname NZ_QRPE010000471.1102
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000471.1102.fna -queryname NZ_QRPE010000471.1102
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000051.1103.fna -queryname NZ_QRPE010000051.1103
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000051.1103.fna -queryname NZ_QRPE010000051.1103
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000051.1103.fna -queryname NZ_QRPE010000051.1103
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000571.1104.fna -queryname NZ_QRPE010000571.1104
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000571.1104.fna -queryname NZ_QRPE010000571.1104
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000571.1104.fna -queryname NZ_QRPE010000571.1104
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000241.1105.fna -queryname NZ_QRPE010000241.1105
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000241.1105.fna -queryname NZ_QRPE010000241.1105
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000241.1105.fna -queryname NZ_QRPE010000241.1105
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000511.1106.fna -queryname NZ_QRPE010000511.1106
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000511.1106.fna -queryname NZ_QRPE010000511.1106
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000511.1106.fna -queryname NZ_QRPE010000511.1106
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000171.1107.fna -queryname NZ_QRPE010000171.1107
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000171.1107.fna -queryname NZ_QRPE010000171.1107
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000171.1107.fna -queryname NZ_QRPE010000171.1107
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000271.1108.fna -queryname NZ_QRPE010000271.1108
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000271.1108.fna -queryname NZ_QRPE010000271.1108
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000271.1108.fna -queryname NZ_QRPE010000271.1108
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006821.110.fna -queryname NZ_CDQQ010006821.110
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006821.110.fna -queryname NZ_CDQQ010006821.110
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006821.110.fna -queryname NZ_CDQQ010006821.110
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000181.1109.fna -queryname NZ_QRPE010000181.1109
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000181.1109.fna -queryname NZ_QRPE010000181.1109
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000181.1109.fna -queryname NZ_QRPE010000181.1109
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000291.1110.fna -queryname NZ_QRPE010000291.1110
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000291.1110.fna -queryname NZ_QRPE010000291.1110
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000291.1110.fna -queryname NZ_QRPE010000291.1110
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000581.1111.fna -queryname NZ_QRPE010000581.1111
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000581.1111.fna -queryname NZ_QRPE010000581.1111
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000581.1111.fna -queryname NZ_QRPE010000581.1111
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000191.1112.fna -queryname NZ_QRPE010000191.1112
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000191.1112.fna -queryname NZ_QRPE010000191.1112
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000191.1112.fna -queryname NZ_QRPE010000191.1112
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000211.1113.fna -queryname NZ_QRPE010000211.1113
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000211.1113.fna -queryname NZ_QRPE010000211.1113
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000211.1113.fna -queryname NZ_QRPE010000211.1113
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000251.1114.fna -queryname NZ_QRPE010000251.1114
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000251.1114.fna -queryname NZ_QRPE010000251.1114
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000251.1114.fna -queryname NZ_QRPE010000251.1114
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000621.1115.fna -queryname NZ_QRPE010000621.1115
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000621.1115.fna -queryname NZ_QRPE010000621.1115
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000621.1115.fna -queryname NZ_QRPE010000621.1115
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000301.1116.fna -queryname NZ_QRPE010000301.1116
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000301.1116.fna -queryname NZ_QRPE010000301.1116
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000301.1116.fna -queryname NZ_QRPE010000301.1116
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000301.1116.AOI.fna -queryname NZ_QRPE010000301.1116
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000301.1116.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000301.1116.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -queryname NZ_QRPE010000301.1116
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -table NZ_QRPE010000301.1116.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000431.1117.fna -queryname NZ_QRPE010000431.1117
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000431.1117.fna -queryname NZ_QRPE010000431.1117
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000431.1117.fna -queryname NZ_QRPE010000431.1117
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000551.1118.fna -queryname NZ_QRPE010000551.1118
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000551.1118.fna -queryname NZ_QRPE010000551.1118
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000551.1118.fna -queryname NZ_QRPE010000551.1118
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001751.111.fna -queryname NZ_CDQQ010001751.111
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001751.111.fna -queryname NZ_CDQQ010001751.111
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001751.111.fna -queryname NZ_CDQQ010001751.111
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000041.1119.fna -queryname NZ_QRPE010000041.1119
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000041.1119.fna -queryname NZ_QRPE010000041.1119
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000041.1119.fna -queryname NZ_QRPE010000041.1119
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000671.1120.fna -queryname NZ_QRPE010000671.1120
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000671.1120.fna -queryname NZ_QRPE010000671.1120
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000671.1120.fna -queryname NZ_QRPE010000671.1120
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000611.1121.fna -queryname NZ_QRPE010000611.1121
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000611.1121.fna -queryname NZ_QRPE010000611.1121
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000611.1121.fna -queryname NZ_QRPE010000611.1121
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000121.1122.fna -queryname NZ_QRPE010000121.1122
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000121.1122.fna -queryname NZ_QRPE010000121.1122
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000121.1122.fna -queryname NZ_QRPE010000121.1122
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000491.1123.fna -queryname NZ_QRPE010000491.1123
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000491.1123.fna -queryname NZ_QRPE010000491.1123
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000491.1123.fna -queryname NZ_QRPE010000491.1123
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000661.1124.fna -queryname NZ_QRPE010000661.1124
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000661.1124.fna -queryname NZ_QRPE010000661.1124
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000661.1124.fna -queryname NZ_QRPE010000661.1124
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000101.1125.fna -queryname NZ_QRPE010000101.1125
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000101.1125.fna -queryname NZ_QRPE010000101.1125
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000101.1125.fna -queryname NZ_QRPE010000101.1125
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000381.1126.fna -queryname NZ_QRPE010000381.1126
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000381.1126.fna -queryname NZ_QRPE010000381.1126
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000381.1126.fna -queryname NZ_QRPE010000381.1126
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000021.1127.fna -queryname NZ_QRPE010000021.1127
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000021.1127.fna -queryname NZ_QRPE010000021.1127
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000021.1127.fna -queryname NZ_QRPE010000021.1127
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000401.1128.fna -queryname NZ_QRPE010000401.1128
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000401.1128.fna -queryname NZ_QRPE010000401.1128
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000401.1128.fna -queryname NZ_QRPE010000401.1128
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001941.112.fna -queryname NZ_CDQQ010001941.112
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001941.112.fna -queryname NZ_CDQQ010001941.112
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001941.112.fna -queryname NZ_CDQQ010001941.112
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000011.1129.fna -queryname NZ_QRPE010000011.1129
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000011.1129.fna -queryname NZ_QRPE010000011.1129
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000011.1129.fna -queryname NZ_QRPE010000011.1129
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000151.1130.fna -queryname NZ_QRPE010000151.1130
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000151.1130.fna -queryname NZ_QRPE010000151.1130
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000151.1130.fna -queryname NZ_QRPE010000151.1130
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000141.1131.fna -queryname NZ_QRPE010000141.1131
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000141.1131.fna -queryname NZ_QRPE010000141.1131
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000141.1131.fna -queryname NZ_QRPE010000141.1131
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000141.1131.AOI.fna -queryname NZ_QRPE010000141.1131
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000141.1131.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000141.1131.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -queryname NZ_QRPE010000141.1131
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -table NZ_QRPE010000141.1131.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000311.1132.fna -queryname NZ_QRPE010000311.1132
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000311.1132.fna -queryname NZ_QRPE010000311.1132
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000311.1132.fna -queryname NZ_QRPE010000311.1132
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000201.1133.fna -queryname NZ_QRPE010000201.1133
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000201.1133.fna -queryname NZ_QRPE010000201.1133
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000201.1133.fna -queryname NZ_QRPE010000201.1133
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000641.1134.fna -queryname NZ_QRPE010000641.1134
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000641.1134.fna -queryname NZ_QRPE010000641.1134
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000641.1134.fna -queryname NZ_QRPE010000641.1134
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000091.1135.fna -queryname NZ_QRPE010000091.1135
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000091.1135.fna -queryname NZ_QRPE010000091.1135
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000091.1135.fna -queryname NZ_QRPE010000091.1135
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000111.1136.fna -queryname NZ_QRPE010000111.1136
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000111.1136.fna -queryname NZ_QRPE010000111.1136
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000111.1136.fna -queryname NZ_QRPE010000111.1136
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000361.1137.fna -queryname NZ_QRPE010000361.1137
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000361.1137.fna -queryname NZ_QRPE010000361.1137
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000361.1137.fna -queryname NZ_QRPE010000361.1137
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000411.1138.fna -queryname NZ_QRPE010000411.1138
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000411.1138.fna -queryname NZ_QRPE010000411.1138
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000411.1138.fna -queryname NZ_QRPE010000411.1138
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005531.113.fna -queryname NZ_CDQQ010005531.113
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005531.113.fna -queryname NZ_CDQQ010005531.113
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005531.113.fna -queryname NZ_CDQQ010005531.113
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000421.1139.fna -queryname NZ_QRPE010000421.1139
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000421.1139.fna -queryname NZ_QRPE010000421.1139
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000421.1139.fna -queryname NZ_QRPE010000421.1139
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000461.1140.fna -queryname NZ_QRPE010000461.1140
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000461.1140.fna -queryname NZ_QRPE010000461.1140
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000461.1140.fna -queryname NZ_QRPE010000461.1140
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000391.1141.fna -queryname NZ_QRPE010000391.1141
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000391.1141.fna -queryname NZ_QRPE010000391.1141
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000391.1141.fna -queryname NZ_QRPE010000391.1141
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000161.1142.fna -queryname NZ_QRPE010000161.1142
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000161.1142.fna -queryname NZ_QRPE010000161.1142
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000161.1142.fna -queryname NZ_QRPE010000161.1142
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000221.1143.fna -queryname NZ_QRPE010000221.1143
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000221.1143.fna -queryname NZ_QRPE010000221.1143
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000221.1143.fna -queryname NZ_QRPE010000221.1143
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000341.1144.fna -queryname NZ_QRPE010000341.1144
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000341.1144.fna -queryname NZ_QRPE010000341.1144
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000341.1144.fna -queryname NZ_QRPE010000341.1144
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000451.1145.fna -queryname NZ_QRPE010000451.1145
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000451.1145.fna -queryname NZ_QRPE010000451.1145
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000451.1145.fna -queryname NZ_QRPE010000451.1145
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000331.1146.fna -queryname NZ_QRPE010000331.1146
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000331.1146.fna -queryname NZ_QRPE010000331.1146
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000331.1146.fna -queryname NZ_QRPE010000331.1146
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000231.1147.fna -queryname NZ_QRPE010000231.1147
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000231.1147.fna -queryname NZ_QRPE010000231.1147
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000231.1147.fna -queryname NZ_QRPE010000231.1147
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000591.1148.fna -queryname NZ_QRPE010000591.1148
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000591.1148.fna -queryname NZ_QRPE010000591.1148
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000591.1148.fna -queryname NZ_QRPE010000591.1148
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006741.114.fna -queryname NZ_CDQQ010006741.114
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006741.114.fna -queryname NZ_CDQQ010006741.114
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006741.114.fna -queryname NZ_CDQQ010006741.114
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000541.1149.fna -queryname NZ_QRPE010000541.1149
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000541.1149.fna -queryname NZ_QRPE010000541.1149
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000541.1149.fna -queryname NZ_QRPE010000541.1149
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000531.1150.fna -queryname NZ_QRPE010000531.1150
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000531.1150.fna -queryname NZ_QRPE010000531.1150
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000531.1150.fna -queryname NZ_QRPE010000531.1150
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000351.1151.fna -queryname NZ_QRPE010000351.1151
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000351.1151.fna -queryname NZ_QRPE010000351.1151
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRPE010000351.1151.fna -queryname NZ_QRPE010000351.1151
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000031.1152.fna -queryname NZ_QRQM010000031.1152
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000031.1152.fna -queryname NZ_QRQM010000031.1152
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000031.1152.fna -queryname NZ_QRQM010000031.1152
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000011.1153.fna -queryname NZ_QRQM010000011.1153
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000011.1153.fna -queryname NZ_QRQM010000011.1153
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000011.1153.fna -queryname NZ_QRQM010000011.1153
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000431.1154.fna -queryname NZ_QRQM010000431.1154
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000431.1154.fna -queryname NZ_QRQM010000431.1154
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000431.1154.fna -queryname NZ_QRQM010000431.1154
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000331.1155.fna -queryname NZ_QRQM010000331.1155
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000331.1155.fna -queryname NZ_QRQM010000331.1155
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000331.1155.fna -queryname NZ_QRQM010000331.1155
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000441.1156.fna -queryname NZ_QRQM010000441.1156
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000441.1156.fna -queryname NZ_QRQM010000441.1156
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000441.1156.fna -queryname NZ_QRQM010000441.1156
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000311.1157.fna -queryname NZ_QRQM010000311.1157
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000311.1157.fna -queryname NZ_QRQM010000311.1157
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000311.1157.fna -queryname NZ_QRQM010000311.1157
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000461.1158.fna -queryname NZ_QRQM010000461.1158
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000461.1158.fna -queryname NZ_QRQM010000461.1158
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000461.1158.fna -queryname NZ_QRQM010000461.1158
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007141.115.fna -queryname NZ_CDQQ010007141.115
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007141.115.fna -queryname NZ_CDQQ010007141.115
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007141.115.fna -queryname NZ_CDQQ010007141.115
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000401.1159.fna -queryname NZ_QRQM010000401.1159
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000401.1159.fna -queryname NZ_QRQM010000401.1159
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000401.1159.fna -queryname NZ_QRQM010000401.1159
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000361.1160.fna -queryname NZ_QRQM010000361.1160
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000361.1160.fna -queryname NZ_QRQM010000361.1160
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000361.1160.fna -queryname NZ_QRQM010000361.1160
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000051.1161.fna -queryname NZ_QRQM010000051.1161
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000051.1161.fna -queryname NZ_QRQM010000051.1161
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000051.1161.fna -queryname NZ_QRQM010000051.1161
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000111.1162.fna -queryname NZ_QRQM010000111.1162
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000111.1162.fna -queryname NZ_QRQM010000111.1162
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000111.1162.fna -queryname NZ_QRQM010000111.1162
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000561.1163.fna -queryname NZ_QRQM010000561.1163
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000561.1163.fna -queryname NZ_QRQM010000561.1163
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000561.1163.fna -queryname NZ_QRQM010000561.1163
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000511.1164.fna -queryname NZ_QRQM010000511.1164
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000511.1164.fna -queryname NZ_QRQM010000511.1164
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000511.1164.fna -queryname NZ_QRQM010000511.1164
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000381.1165.fna -queryname NZ_QRQM010000381.1165
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000381.1165.fna -queryname NZ_QRQM010000381.1165
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000381.1165.fna -queryname NZ_QRQM010000381.1165
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000371.1166.fna -queryname NZ_QRQM010000371.1166
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000371.1166.fna -queryname NZ_QRQM010000371.1166
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000371.1166.fna -queryname NZ_QRQM010000371.1166
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000221.1167.fna -queryname NZ_QRQM010000221.1167
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000221.1167.fna -queryname NZ_QRQM010000221.1167
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000221.1167.fna -queryname NZ_QRQM010000221.1167
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000591.1168.fna -queryname NZ_QRQM010000591.1168
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000591.1168.fna -queryname NZ_QRQM010000591.1168
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000591.1168.fna -queryname NZ_QRQM010000591.1168
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003651.116.fna -queryname NZ_CDQQ010003651.116
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003651.116.fna -queryname NZ_CDQQ010003651.116
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003651.116.fna -queryname NZ_CDQQ010003651.116
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000061.1169.fna -queryname NZ_QRQM010000061.1169
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000061.1169.fna -queryname NZ_QRQM010000061.1169
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000061.1169.fna -queryname NZ_QRQM010000061.1169
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000551.1170.fna -queryname NZ_QRQM010000551.1170
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000551.1170.fna -queryname NZ_QRQM010000551.1170
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000551.1170.fna -queryname NZ_QRQM010000551.1170
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000341.1171.fna -queryname NZ_QRQM010000341.1171
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000341.1171.fna -queryname NZ_QRQM010000341.1171
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000341.1171.fna -queryname NZ_QRQM010000341.1171
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000141.1172.fna -queryname NZ_QRQM010000141.1172
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000141.1172.fna -queryname NZ_QRQM010000141.1172
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000141.1172.fna -queryname NZ_QRQM010000141.1172
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000141.1172.AOI.fna -queryname NZ_QRQM010000141.1172
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000141.1172.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000141.1172.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -queryname NZ_QRQM010000141.1172
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -table NZ_QRQM010000141.1172.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000231.1173.fna -queryname NZ_QRQM010000231.1173
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000231.1173.fna -queryname NZ_QRQM010000231.1173
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000231.1173.fna -queryname NZ_QRQM010000231.1173
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000241.1174.fna -queryname NZ_QRQM010000241.1174
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000241.1174.fna -queryname NZ_QRQM010000241.1174
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000241.1174.fna -queryname NZ_QRQM010000241.1174
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000261.1175.fna -queryname NZ_QRQM010000261.1175
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000261.1175.fna -queryname NZ_QRQM010000261.1175
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000261.1175.fna -queryname NZ_QRQM010000261.1175
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000301.1176.fna -queryname NZ_QRQM010000301.1176
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000301.1176.fna -queryname NZ_QRQM010000301.1176
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000301.1176.fna -queryname NZ_QRQM010000301.1176
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000541.1177.fna -queryname NZ_QRQM010000541.1177
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000541.1177.fna -queryname NZ_QRQM010000541.1177
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000541.1177.fna -queryname NZ_QRQM010000541.1177
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000041.1178.fna -queryname NZ_QRQM010000041.1178
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000041.1178.fna -queryname NZ_QRQM010000041.1178
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000041.1178.fna -queryname NZ_QRQM010000041.1178
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003811.117.fna -queryname NZ_CDQQ010003811.117
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003811.117.fna -queryname NZ_CDQQ010003811.117
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003811.117.fna -queryname NZ_CDQQ010003811.117
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000191.1179.fna -queryname NZ_QRQM010000191.1179
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000191.1179.fna -queryname NZ_QRQM010000191.1179
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000191.1179.fna -queryname NZ_QRQM010000191.1179
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000271.1180.fna -queryname NZ_QRQM010000271.1180
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000271.1180.fna -queryname NZ_QRQM010000271.1180
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000271.1180.fna -queryname NZ_QRQM010000271.1180
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000081.1181.fna -queryname NZ_QRQM010000081.1181
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000081.1181.fna -queryname NZ_QRQM010000081.1181
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000081.1181.fna -queryname NZ_QRQM010000081.1181
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000481.1182.fna -queryname NZ_QRQM010000481.1182
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000481.1182.fna -queryname NZ_QRQM010000481.1182
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000481.1182.fna -queryname NZ_QRQM010000481.1182
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000021.1183.fna -queryname NZ_QRQM010000021.1183
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000021.1183.fna -queryname NZ_QRQM010000021.1183
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000021.1183.fna -queryname NZ_QRQM010000021.1183
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000121.1184.fna -queryname NZ_QRQM010000121.1184
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000121.1184.fna -queryname NZ_QRQM010000121.1184
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000121.1184.fna -queryname NZ_QRQM010000121.1184
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000161.1185.fna -queryname NZ_QRQM010000161.1185
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000161.1185.fna -queryname NZ_QRQM010000161.1185
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000161.1185.fna -queryname NZ_QRQM010000161.1185
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000101.1186.fna -queryname NZ_QRQM010000101.1186
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000101.1186.fna -queryname NZ_QRQM010000101.1186
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000101.1186.fna -queryname NZ_QRQM010000101.1186
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000571.1187.fna -queryname NZ_QRQM010000571.1187
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000571.1187.fna -queryname NZ_QRQM010000571.1187
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000571.1187.fna -queryname NZ_QRQM010000571.1187
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000491.1188.fna -queryname NZ_QRQM010000491.1188
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000491.1188.fna -queryname NZ_QRQM010000491.1188
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000491.1188.fna -queryname NZ_QRQM010000491.1188
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010010951.118.fna -queryname NZ_CDQQ010010951.118
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010010951.118.fna -queryname NZ_CDQQ010010951.118
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010010951.118.fna -queryname NZ_CDQQ010010951.118
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000471.1189.fna -queryname NZ_QRQM010000471.1189
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000471.1189.fna -queryname NZ_QRQM010000471.1189
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000471.1189.fna -queryname NZ_QRQM010000471.1189
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000071.1190.fna -queryname NZ_QRQM010000071.1190
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000071.1190.fna -queryname NZ_QRQM010000071.1190
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000071.1190.fna -queryname NZ_QRQM010000071.1190
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000171.1191.fna -queryname NZ_QRQM010000171.1191
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000171.1191.fna -queryname NZ_QRQM010000171.1191
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000171.1191.fna -queryname NZ_QRQM010000171.1191
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000391.1192.fna -queryname NZ_QRQM010000391.1192
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000391.1192.fna -queryname NZ_QRQM010000391.1192
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000391.1192.fna -queryname NZ_QRQM010000391.1192
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000251.1193.fna -queryname NZ_QRQM010000251.1193
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000251.1193.fna -queryname NZ_QRQM010000251.1193
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000251.1193.fna -queryname NZ_QRQM010000251.1193
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000211.1194.fna -queryname NZ_QRQM010000211.1194
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000211.1194.fna -queryname NZ_QRQM010000211.1194
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000211.1194.fna -queryname NZ_QRQM010000211.1194
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000211.1194.AOI.fna -queryname NZ_QRQM010000211.1194
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000211.1194.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000211.1194.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -queryname NZ_QRQM010000211.1194
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -table NZ_QRQM010000211.1194.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000151.1195.fna -queryname NZ_QRQM010000151.1195
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000151.1195.fna -queryname NZ_QRQM010000151.1195
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000151.1195.fna -queryname NZ_QRQM010000151.1195
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000501.1196.fna -queryname NZ_QRQM010000501.1196
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000501.1196.fna -queryname NZ_QRQM010000501.1196
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000501.1196.fna -queryname NZ_QRQM010000501.1196
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000181.1197.fna -queryname NZ_QRQM010000181.1197
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000181.1197.fna -queryname NZ_QRQM010000181.1197
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000181.1197.fna -queryname NZ_QRQM010000181.1197
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000421.1198.fna -queryname NZ_QRQM010000421.1198
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000421.1198.fna -queryname NZ_QRQM010000421.1198
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000421.1198.fna -queryname NZ_QRQM010000421.1198
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003421.11.fna -queryname NZ_CDQQ010003421.11
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003421.11.fna -queryname NZ_CDQQ010003421.11
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003421.11.fna -queryname NZ_CDQQ010003421.11
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008171.119.fna -queryname NZ_CDQQ010008171.119
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008171.119.fna -queryname NZ_CDQQ010008171.119
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008171.119.fna -queryname NZ_CDQQ010008171.119
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000201.1199.fna -queryname NZ_QRQM010000201.1199
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000201.1199.fna -queryname NZ_QRQM010000201.1199
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000201.1199.fna -queryname NZ_QRQM010000201.1199
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000291.1200.fna -queryname NZ_QRQM010000291.1200
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000291.1200.fna -queryname NZ_QRQM010000291.1200
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000291.1200.fna -queryname NZ_QRQM010000291.1200
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000131.1201.fna -queryname NZ_QRQM010000131.1201
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000131.1201.fna -queryname NZ_QRQM010000131.1201
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000131.1201.fna -queryname NZ_QRQM010000131.1201
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000091.1202.fna -queryname NZ_QRQM010000091.1202
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000091.1202.fna -queryname NZ_QRQM010000091.1202
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000091.1202.fna -queryname NZ_QRQM010000091.1202
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000521.1203.fna -queryname NZ_QRQM010000521.1203
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000521.1203.fna -queryname NZ_QRQM010000521.1203
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000521.1203.fna -queryname NZ_QRQM010000521.1203
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000281.1204.fna -queryname NZ_QRQM010000281.1204
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000281.1204.fna -queryname NZ_QRQM010000281.1204
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000281.1204.fna -queryname NZ_QRQM010000281.1204
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000451.1205.fna -queryname NZ_QRQM010000451.1205
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000451.1205.fna -queryname NZ_QRQM010000451.1205
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000451.1205.fna -queryname NZ_QRQM010000451.1205
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000531.1206.fna -queryname NZ_QRQM010000531.1206
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000531.1206.fna -queryname NZ_QRQM010000531.1206
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000531.1206.fna -queryname NZ_QRQM010000531.1206
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000581.1207.fna -queryname NZ_QRQM010000581.1207
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000581.1207.fna -queryname NZ_QRQM010000581.1207
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000581.1207.fna -queryname NZ_QRQM010000581.1207
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000411.1208.fna -queryname NZ_QRQM010000411.1208
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000411.1208.fna -queryname NZ_QRQM010000411.1208
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000411.1208.fna -queryname NZ_QRQM010000411.1208
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008981.120.fna -queryname NZ_CDQQ010008981.120
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008981.120.fna -queryname NZ_CDQQ010008981.120
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008981.120.fna -queryname NZ_CDQQ010008981.120
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000321.1209.fna -queryname NZ_QRQM010000321.1209
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000321.1209.fna -queryname NZ_QRQM010000321.1209
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000321.1209.fna -queryname NZ_QRQM010000321.1209
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000351.1210.fna -queryname NZ_QRQM010000351.1210
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000351.1210.fna -queryname NZ_QRQM010000351.1210
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000351.1210.fna -queryname NZ_QRQM010000351.1210
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000601.1211.fna -queryname NZ_QRQM010000601.1211
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000601.1211.fna -queryname NZ_QRQM010000601.1211
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRQM010000601.1211.fna -queryname NZ_QRQM010000601.1211
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000011.1212.fna -queryname NZ_SPGP010000011.1212
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000011.1212.fna -queryname NZ_SPGP010000011.1212
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000011.1212.fna -queryname NZ_SPGP010000011.1212
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000011.1212.AOI.fna -queryname NZ_SPGP010000011.1212
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000011.1212.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000011.1212.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -queryname NZ_SPGP010000011.1212
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -table NZ_SPGP010000011.1212.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000401.1213.fna -queryname NZ_SPGP010000401.1213
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000401.1213.fna -queryname NZ_SPGP010000401.1213
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000401.1213.fna -queryname NZ_SPGP010000401.1213
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000371.1214.fna -queryname NZ_SPGP010000371.1214
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000371.1214.fna -queryname NZ_SPGP010000371.1214
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000371.1214.fna -queryname NZ_SPGP010000371.1214
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000321.1215.fna -queryname NZ_SPGP010000321.1215
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000321.1215.fna -queryname NZ_SPGP010000321.1215
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000321.1215.fna -queryname NZ_SPGP010000321.1215
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000071.1216.fna -queryname NZ_SPGP010000071.1216
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000071.1216.fna -queryname NZ_SPGP010000071.1216
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000071.1216.fna -queryname NZ_SPGP010000071.1216
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000241.1217.fna -queryname NZ_SPGP010000241.1217
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000241.1217.fna -queryname NZ_SPGP010000241.1217
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000241.1217.fna -queryname NZ_SPGP010000241.1217
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000061.1218.fna -queryname NZ_SPGP010000061.1218
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000061.1218.fna -queryname NZ_SPGP010000061.1218
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000061.1218.fna -queryname NZ_SPGP010000061.1218
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006571.121.fna -queryname NZ_CDQQ010006571.121
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006571.121.fna -queryname NZ_CDQQ010006571.121
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006571.121.fna -queryname NZ_CDQQ010006571.121
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000461.1219.fna -queryname NZ_SPGP010000461.1219
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000461.1219.fna -queryname NZ_SPGP010000461.1219
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000461.1219.fna -queryname NZ_SPGP010000461.1219
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000191.1220.fna -queryname NZ_SPGP010000191.1220
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000191.1220.fna -queryname NZ_SPGP010000191.1220
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000191.1220.fna -queryname NZ_SPGP010000191.1220
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000431.1221.fna -queryname NZ_SPGP010000431.1221
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000431.1221.fna -queryname NZ_SPGP010000431.1221
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000431.1221.fna -queryname NZ_SPGP010000431.1221
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000331.1222.fna -queryname NZ_SPGP010000331.1222
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000331.1222.fna -queryname NZ_SPGP010000331.1222
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000331.1222.fna -queryname NZ_SPGP010000331.1222
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000041.1223.fna -queryname NZ_SPGP010000041.1223
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000041.1223.fna -queryname NZ_SPGP010000041.1223
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000041.1223.fna -queryname NZ_SPGP010000041.1223
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000451.1224.fna -queryname NZ_SPGP010000451.1224
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000451.1224.fna -queryname NZ_SPGP010000451.1224
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000451.1224.fna -queryname NZ_SPGP010000451.1224
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000211.1225.fna -queryname NZ_SPGP010000211.1225
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000211.1225.fna -queryname NZ_SPGP010000211.1225
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000211.1225.fna -queryname NZ_SPGP010000211.1225
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000421.1226.fna -queryname NZ_SPGP010000421.1226
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000421.1226.fna -queryname NZ_SPGP010000421.1226
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000421.1226.fna -queryname NZ_SPGP010000421.1226
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000021.1227.fna -queryname NZ_SPGP010000021.1227
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000021.1227.fna -queryname NZ_SPGP010000021.1227
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000021.1227.fna -queryname NZ_SPGP010000021.1227
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000121.1228.fna -queryname NZ_SPGP010000121.1228
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000121.1228.fna -queryname NZ_SPGP010000121.1228
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000121.1228.fna -queryname NZ_SPGP010000121.1228
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008631.122.fna -queryname NZ_CDQQ010008631.122
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008631.122.fna -queryname NZ_CDQQ010008631.122
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008631.122.fna -queryname NZ_CDQQ010008631.122
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000141.1229.fna -queryname NZ_SPGP010000141.1229
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000141.1229.fna -queryname NZ_SPGP010000141.1229
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000141.1229.fna -queryname NZ_SPGP010000141.1229
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000231.1230.fna -queryname NZ_SPGP010000231.1230
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000231.1230.fna -queryname NZ_SPGP010000231.1230
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000231.1230.fna -queryname NZ_SPGP010000231.1230
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000171.1231.fna -queryname NZ_SPGP010000171.1231
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000171.1231.fna -queryname NZ_SPGP010000171.1231
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000171.1231.fna -queryname NZ_SPGP010000171.1231
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000031.1232.fna -queryname NZ_SPGP010000031.1232
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000031.1232.fna -queryname NZ_SPGP010000031.1232
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000031.1232.fna -queryname NZ_SPGP010000031.1232
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000181.1233.fna -queryname NZ_SPGP010000181.1233
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000181.1233.fna -queryname NZ_SPGP010000181.1233
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000181.1233.fna -queryname NZ_SPGP010000181.1233
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000101.1234.fna -queryname NZ_SPGP010000101.1234
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000101.1234.fna -queryname NZ_SPGP010000101.1234
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000101.1234.fna -queryname NZ_SPGP010000101.1234
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000261.1235.fna -queryname NZ_SPGP010000261.1235
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000261.1235.fna -queryname NZ_SPGP010000261.1235
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000261.1235.fna -queryname NZ_SPGP010000261.1235
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000281.1236.fna -queryname NZ_SPGP010000281.1236
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000281.1236.fna -queryname NZ_SPGP010000281.1236
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000281.1236.fna -queryname NZ_SPGP010000281.1236
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000311.1237.fna -queryname NZ_SPGP010000311.1237
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000311.1237.fna -queryname NZ_SPGP010000311.1237
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000311.1237.fna -queryname NZ_SPGP010000311.1237
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000411.1238.fna -queryname NZ_SPGP010000411.1238
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000411.1238.fna -queryname NZ_SPGP010000411.1238
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000411.1238.fna -queryname NZ_SPGP010000411.1238
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002921.123.fna -queryname NZ_CDQQ010002921.123
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002921.123.fna -queryname NZ_CDQQ010002921.123
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002921.123.fna -queryname NZ_CDQQ010002921.123
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000391.1239.fna -queryname NZ_SPGP010000391.1239
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000391.1239.fna -queryname NZ_SPGP010000391.1239
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000391.1239.fna -queryname NZ_SPGP010000391.1239
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000051.1240.fna -queryname NZ_SPGP010000051.1240
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000051.1240.fna -queryname NZ_SPGP010000051.1240
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000051.1240.fna -queryname NZ_SPGP010000051.1240
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000481.1241.fna -queryname NZ_SPGP010000481.1241
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000481.1241.fna -queryname NZ_SPGP010000481.1241
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000481.1241.fna -queryname NZ_SPGP010000481.1241
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000381.1242.fna -queryname NZ_SPGP010000381.1242
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000381.1242.fna -queryname NZ_SPGP010000381.1242
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000381.1242.fna -queryname NZ_SPGP010000381.1242
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000091.1243.fna -queryname NZ_SPGP010000091.1243
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000091.1243.fna -queryname NZ_SPGP010000091.1243
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000091.1243.fna -queryname NZ_SPGP010000091.1243
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000301.1244.fna -queryname NZ_SPGP010000301.1244
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000301.1244.fna -queryname NZ_SPGP010000301.1244
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000301.1244.fna -queryname NZ_SPGP010000301.1244
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000291.1245.fna -queryname NZ_SPGP010000291.1245
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000291.1245.fna -queryname NZ_SPGP010000291.1245
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000291.1245.fna -queryname NZ_SPGP010000291.1245
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000081.1246.fna -queryname NZ_SPGP010000081.1246
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000081.1246.fna -queryname NZ_SPGP010000081.1246
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000081.1246.fna -queryname NZ_SPGP010000081.1246
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000251.1247.fna -queryname NZ_SPGP010000251.1247
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000251.1247.fna -queryname NZ_SPGP010000251.1247
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000251.1247.fna -queryname NZ_SPGP010000251.1247
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000131.1248.fna -queryname NZ_SPGP010000131.1248
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000131.1248.fna -queryname NZ_SPGP010000131.1248
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000131.1248.fna -queryname NZ_SPGP010000131.1248
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002101.124.fna -queryname NZ_CDQQ010002101.124
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002101.124.fna -queryname NZ_CDQQ010002101.124
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002101.124.fna -queryname NZ_CDQQ010002101.124
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000201.1249.fna -queryname NZ_SPGP010000201.1249
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000201.1249.fna -queryname NZ_SPGP010000201.1249
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000201.1249.fna -queryname NZ_SPGP010000201.1249
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000471.1250.fna -queryname NZ_SPGP010000471.1250
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000471.1250.fna -queryname NZ_SPGP010000471.1250
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000471.1250.fna -queryname NZ_SPGP010000471.1250
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000361.1251.fna -queryname NZ_SPGP010000361.1251
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000361.1251.fna -queryname NZ_SPGP010000361.1251
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000361.1251.fna -queryname NZ_SPGP010000361.1251
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000271.1252.fna -queryname NZ_SPGP010000271.1252
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000271.1252.fna -queryname NZ_SPGP010000271.1252
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000271.1252.fna -queryname NZ_SPGP010000271.1252
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000161.1253.fna -queryname NZ_SPGP010000161.1253
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000161.1253.fna -queryname NZ_SPGP010000161.1253
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000161.1253.fna -queryname NZ_SPGP010000161.1253
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000221.1254.fna -queryname NZ_SPGP010000221.1254
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000221.1254.fna -queryname NZ_SPGP010000221.1254
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000221.1254.fna -queryname NZ_SPGP010000221.1254
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000441.1255.fna -queryname NZ_SPGP010000441.1255
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000441.1255.fna -queryname NZ_SPGP010000441.1255
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000441.1255.fna -queryname NZ_SPGP010000441.1255
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000111.1256.fna -queryname NZ_SPGP010000111.1256
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000111.1256.fna -queryname NZ_SPGP010000111.1256
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000111.1256.fna -queryname NZ_SPGP010000111.1256
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000151.1257.fna -queryname NZ_SPGP010000151.1257
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000151.1257.fna -queryname NZ_SPGP010000151.1257
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000151.1257.fna -queryname NZ_SPGP010000151.1257
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000341.1258.fna -queryname NZ_SPGP010000341.1258
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000341.1258.fna -queryname NZ_SPGP010000341.1258
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000341.1258.fna -queryname NZ_SPGP010000341.1258
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001491.125.fna -queryname NZ_CDQQ010001491.125
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001491.125.fna -queryname NZ_CDQQ010001491.125
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001491.125.fna -queryname NZ_CDQQ010001491.125
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000351.1259.fna -queryname NZ_SPGP010000351.1259
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000351.1259.fna -queryname NZ_SPGP010000351.1259
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_SPGP010000351.1259.fna -queryname NZ_SPGP010000351.1259
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000511.1260.fna -queryname NZ_VWFA010000511.1260
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000511.1260.fna -queryname NZ_VWFA010000511.1260
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000511.1260.fna -queryname NZ_VWFA010000511.1260
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000381.1261.fna -queryname NZ_VWFA010000381.1261
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000381.1261.fna -queryname NZ_VWFA010000381.1261
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000381.1261.fna -queryname NZ_VWFA010000381.1261
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000291.1262.fna -queryname NZ_VWFA010000291.1262
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000291.1262.fna -queryname NZ_VWFA010000291.1262
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000291.1262.fna -queryname NZ_VWFA010000291.1262
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000471.1263.fna -queryname NZ_VWFA010000471.1263
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000471.1263.fna -queryname NZ_VWFA010000471.1263
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000471.1263.fna -queryname NZ_VWFA010000471.1263
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000411.1264.fna -queryname NZ_VWFA010000411.1264
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000411.1264.fna -queryname NZ_VWFA010000411.1264
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000411.1264.fna -queryname NZ_VWFA010000411.1264
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000111.1265.fna -queryname NZ_VWFA010000111.1265
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000111.1265.fna -queryname NZ_VWFA010000111.1265
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000111.1265.fna -queryname NZ_VWFA010000111.1265
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000231.1266.fna -queryname NZ_VWFA010000231.1266
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000231.1266.fna -queryname NZ_VWFA010000231.1266
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000231.1266.fna -queryname NZ_VWFA010000231.1266
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000281.1267.fna -queryname NZ_VWFA010000281.1267
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000281.1267.fna -queryname NZ_VWFA010000281.1267
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000281.1267.fna -queryname NZ_VWFA010000281.1267
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000351.1268.fna -queryname NZ_VWFA010000351.1268
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000351.1268.fna -queryname NZ_VWFA010000351.1268
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000351.1268.fna -queryname NZ_VWFA010000351.1268
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001241.126.fna -queryname NZ_CDQQ010001241.126
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001241.126.fna -queryname NZ_CDQQ010001241.126
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001241.126.fna -queryname NZ_CDQQ010001241.126
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000341.1269.fna -queryname NZ_VWFA010000341.1269
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000341.1269.fna -queryname NZ_VWFA010000341.1269
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000341.1269.fna -queryname NZ_VWFA010000341.1269
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000621.1270.fna -queryname NZ_VWFA010000621.1270
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000621.1270.fna -queryname NZ_VWFA010000621.1270
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000621.1270.fna -queryname NZ_VWFA010000621.1270
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000141.1271.fna -queryname NZ_VWFA010000141.1271
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000141.1271.fna -queryname NZ_VWFA010000141.1271
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000141.1271.fna -queryname NZ_VWFA010000141.1271
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000521.1272.fna -queryname NZ_VWFA010000521.1272
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000521.1272.fna -queryname NZ_VWFA010000521.1272
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000521.1272.fna -queryname NZ_VWFA010000521.1272
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000331.1273.fna -queryname NZ_VWFA010000331.1273
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000331.1273.fna -queryname NZ_VWFA010000331.1273
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000331.1273.fna -queryname NZ_VWFA010000331.1273
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000561.1274.fna -queryname NZ_VWFA010000561.1274
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000561.1274.fna -queryname NZ_VWFA010000561.1274
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000561.1274.fna -queryname NZ_VWFA010000561.1274
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000101.1275.fna -queryname NZ_VWFA010000101.1275
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000101.1275.fna -queryname NZ_VWFA010000101.1275
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000101.1275.fna -queryname NZ_VWFA010000101.1275
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000361.1276.fna -queryname NZ_VWFA010000361.1276
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000361.1276.fna -queryname NZ_VWFA010000361.1276
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000361.1276.fna -queryname NZ_VWFA010000361.1276
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000361.1276.AOI.fna -queryname NZ_VWFA010000361.1276
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000361.1276.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000361.1276.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -queryname NZ_VWFA010000361.1276
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -table NZ_VWFA010000361.1276.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000201.1277.fna -queryname NZ_VWFA010000201.1277
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000201.1277.fna -queryname NZ_VWFA010000201.1277
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000201.1277.fna -queryname NZ_VWFA010000201.1277
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000301.1278.fna -queryname NZ_VWFA010000301.1278
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000301.1278.fna -queryname NZ_VWFA010000301.1278
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000301.1278.fna -queryname NZ_VWFA010000301.1278
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003951.127.fna -queryname NZ_CDQQ010003951.127
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003951.127.fna -queryname NZ_CDQQ010003951.127
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003951.127.fna -queryname NZ_CDQQ010003951.127
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000041.1279.fna -queryname NZ_VWFA010000041.1279
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000041.1279.fna -queryname NZ_VWFA010000041.1279
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000041.1279.fna -queryname NZ_VWFA010000041.1279
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000391.1280.fna -queryname NZ_VWFA010000391.1280
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000391.1280.fna -queryname NZ_VWFA010000391.1280
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000391.1280.fna -queryname NZ_VWFA010000391.1280
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000611.1281.fna -queryname NZ_VWFA010000611.1281
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000611.1281.fna -queryname NZ_VWFA010000611.1281
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000611.1281.fna -queryname NZ_VWFA010000611.1281
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000151.1282.fna -queryname NZ_VWFA010000151.1282
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000151.1282.fna -queryname NZ_VWFA010000151.1282
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000151.1282.fna -queryname NZ_VWFA010000151.1282
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000461.1283.fna -queryname NZ_VWFA010000461.1283
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000461.1283.fna -queryname NZ_VWFA010000461.1283
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000461.1283.fna -queryname NZ_VWFA010000461.1283
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000221.1284.fna -queryname NZ_VWFA010000221.1284
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000221.1284.fna -queryname NZ_VWFA010000221.1284
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000221.1284.fna -queryname NZ_VWFA010000221.1284
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000241.1285.fna -queryname NZ_VWFA010000241.1285
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000241.1285.fna -queryname NZ_VWFA010000241.1285
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000241.1285.fna -queryname NZ_VWFA010000241.1285
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000261.1286.fna -queryname NZ_VWFA010000261.1286
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000261.1286.fna -queryname NZ_VWFA010000261.1286
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000261.1286.fna -queryname NZ_VWFA010000261.1286
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000631.1287.fna -queryname NZ_VWFA010000631.1287
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000631.1287.fna -queryname NZ_VWFA010000631.1287
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000631.1287.fna -queryname NZ_VWFA010000631.1287
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000581.1288.fna -queryname NZ_VWFA010000581.1288
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000581.1288.fna -queryname NZ_VWFA010000581.1288
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000581.1288.fna -queryname NZ_VWFA010000581.1288
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006561.128.fna -queryname NZ_CDQQ010006561.128
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006561.128.fna -queryname NZ_CDQQ010006561.128
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006561.128.fna -queryname NZ_CDQQ010006561.128
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000601.1289.fna -queryname NZ_VWFA010000601.1289
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000601.1289.fna -queryname NZ_VWFA010000601.1289
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000601.1289.fna -queryname NZ_VWFA010000601.1289
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000311.1290.fna -queryname NZ_VWFA010000311.1290
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000311.1290.fna -queryname NZ_VWFA010000311.1290
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000311.1290.fna -queryname NZ_VWFA010000311.1290
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000531.1291.fna -queryname NZ_VWFA010000531.1291
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000531.1291.fna -queryname NZ_VWFA010000531.1291
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000531.1291.fna -queryname NZ_VWFA010000531.1291
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000081.1292.fna -queryname NZ_VWFA010000081.1292
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000081.1292.fna -queryname NZ_VWFA010000081.1292
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000081.1292.fna -queryname NZ_VWFA010000081.1292
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000251.1293.fna -queryname NZ_VWFA010000251.1293
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000251.1293.fna -queryname NZ_VWFA010000251.1293
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000251.1293.fna -queryname NZ_VWFA010000251.1293
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000541.1294.fna -queryname NZ_VWFA010000541.1294
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000541.1294.fna -queryname NZ_VWFA010000541.1294
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000541.1294.fna -queryname NZ_VWFA010000541.1294
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000131.1295.fna -queryname NZ_VWFA010000131.1295
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000131.1295.fna -queryname NZ_VWFA010000131.1295
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000131.1295.fna -queryname NZ_VWFA010000131.1295
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000551.1296.fna -queryname NZ_VWFA010000551.1296
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000551.1296.fna -queryname NZ_VWFA010000551.1296
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000551.1296.fna -queryname NZ_VWFA010000551.1296
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000031.1297.fna -queryname NZ_VWFA010000031.1297
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000031.1297.fna -queryname NZ_VWFA010000031.1297
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000031.1297.fna -queryname NZ_VWFA010000031.1297
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000031.1297.AOI.fna -queryname NZ_VWFA010000031.1297
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000031.1297.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000031.1297.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -queryname NZ_VWFA010000031.1297
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -table NZ_VWFA010000031.1297.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000481.1298.fna -queryname NZ_VWFA010000481.1298
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000481.1298.fna -queryname NZ_VWFA010000481.1298
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000481.1298.fna -queryname NZ_VWFA010000481.1298
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002971.12.fna -queryname NZ_CDQQ010002971.12
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002971.12.fna -queryname NZ_CDQQ010002971.12
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002971.12.fna -queryname NZ_CDQQ010002971.12
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001201.129.fna -queryname NZ_CDQQ010001201.129
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001201.129.fna -queryname NZ_CDQQ010001201.129
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001201.129.fna -queryname NZ_CDQQ010001201.129
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000431.1299.fna -queryname NZ_VWFA010000431.1299
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000431.1299.fna -queryname NZ_VWFA010000431.1299
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000431.1299.fna -queryname NZ_VWFA010000431.1299
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000211.1300.fna -queryname NZ_VWFA010000211.1300
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000211.1300.fna -queryname NZ_VWFA010000211.1300
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000211.1300.fna -queryname NZ_VWFA010000211.1300
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000591.1301.fna -queryname NZ_VWFA010000591.1301
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000591.1301.fna -queryname NZ_VWFA010000591.1301
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000591.1301.fna -queryname NZ_VWFA010000591.1301
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000181.1302.fna -queryname NZ_VWFA010000181.1302
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000181.1302.fna -queryname NZ_VWFA010000181.1302
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000181.1302.fna -queryname NZ_VWFA010000181.1302
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000091.1303.fna -queryname NZ_VWFA010000091.1303
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000091.1303.fna -queryname NZ_VWFA010000091.1303
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000091.1303.fna -queryname NZ_VWFA010000091.1303
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000501.1304.fna -queryname NZ_VWFA010000501.1304
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000501.1304.fna -queryname NZ_VWFA010000501.1304
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000501.1304.fna -queryname NZ_VWFA010000501.1304
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000401.1305.fna -queryname NZ_VWFA010000401.1305
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000401.1305.fna -queryname NZ_VWFA010000401.1305
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000401.1305.fna -queryname NZ_VWFA010000401.1305
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000321.1306.fna -queryname NZ_VWFA010000321.1306
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000321.1306.fna -queryname NZ_VWFA010000321.1306
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000321.1306.fna -queryname NZ_VWFA010000321.1306
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000451.1307.fna -queryname NZ_VWFA010000451.1307
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000451.1307.fna -queryname NZ_VWFA010000451.1307
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000451.1307.fna -queryname NZ_VWFA010000451.1307
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000441.1308.fna -queryname NZ_VWFA010000441.1308
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000441.1308.fna -queryname NZ_VWFA010000441.1308
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000441.1308.fna -queryname NZ_VWFA010000441.1308
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000691.130.fna -queryname NZ_CDQQ010000691.130
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000691.130.fna -queryname NZ_CDQQ010000691.130
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000691.130.fna -queryname NZ_CDQQ010000691.130
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000121.1309.fna -queryname NZ_VWFA010000121.1309
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000121.1309.fna -queryname NZ_VWFA010000121.1309
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000121.1309.fna -queryname NZ_VWFA010000121.1309
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000161.1310.fna -queryname NZ_VWFA010000161.1310
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000161.1310.fna -queryname NZ_VWFA010000161.1310
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000161.1310.fna -queryname NZ_VWFA010000161.1310
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000191.1311.fna -queryname NZ_VWFA010000191.1311
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000191.1311.fna -queryname NZ_VWFA010000191.1311
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000191.1311.fna -queryname NZ_VWFA010000191.1311
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000171.1312.fna -queryname NZ_VWFA010000171.1312
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000171.1312.fna -queryname NZ_VWFA010000171.1312
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000171.1312.fna -queryname NZ_VWFA010000171.1312
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000021.1313.fna -queryname NZ_VWFA010000021.1313
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000021.1313.fna -queryname NZ_VWFA010000021.1313
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000021.1313.fna -queryname NZ_VWFA010000021.1313
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000271.1314.fna -queryname NZ_VWFA010000271.1314
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000271.1314.fna -queryname NZ_VWFA010000271.1314
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000271.1314.fna -queryname NZ_VWFA010000271.1314
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000371.1315.fna -queryname NZ_VWFA010000371.1315
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000371.1315.fna -queryname NZ_VWFA010000371.1315
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000371.1315.fna -queryname NZ_VWFA010000371.1315
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000421.1316.fna -queryname NZ_VWFA010000421.1316
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000421.1316.fna -queryname NZ_VWFA010000421.1316
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000421.1316.fna -queryname NZ_VWFA010000421.1316
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000571.1317.fna -queryname NZ_VWFA010000571.1317
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000571.1317.fna -queryname NZ_VWFA010000571.1317
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000571.1317.fna -queryname NZ_VWFA010000571.1317
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000491.1318.fna -queryname NZ_VWFA010000491.1318
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000491.1318.fna -queryname NZ_VWFA010000491.1318
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000491.1318.fna -queryname NZ_VWFA010000491.1318
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006761.131.fna -queryname NZ_CDQQ010006761.131
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006761.131.fna -queryname NZ_CDQQ010006761.131
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006761.131.fna -queryname NZ_CDQQ010006761.131
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000051.1319.fna -queryname NZ_VWFA010000051.1319
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000051.1319.fna -queryname NZ_VWFA010000051.1319
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000051.1319.fna -queryname NZ_VWFA010000051.1319
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000071.1320.fna -queryname NZ_VWFA010000071.1320
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000071.1320.fna -queryname NZ_VWFA010000071.1320
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000071.1320.fna -queryname NZ_VWFA010000071.1320
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000071.1320.AOI.fna -queryname NZ_VWFA010000071.1320
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000071.1320.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000071.1320.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -queryname NZ_VWFA010000071.1320
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -table NZ_VWFA010000071.1320.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000011.1321.fna -queryname NZ_VWFA010000011.1321
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000011.1321.fna -queryname NZ_VWFA010000011.1321
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000011.1321.fna -queryname NZ_VWFA010000011.1321
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000061.1322.fna -queryname NZ_VWFA010000061.1322
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000061.1322.fna -queryname NZ_VWFA010000061.1322
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_VWFA010000061.1322.fna -queryname NZ_VWFA010000061.1322
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000921.132.fna -queryname NZ_CDQQ010000921.132
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000921.132.fna -queryname NZ_CDQQ010000921.132
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000921.132.fna -queryname NZ_CDQQ010000921.132
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006481.133.fna -queryname NZ_CDQQ010006481.133
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006481.133.fna -queryname NZ_CDQQ010006481.133
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006481.133.fna -queryname NZ_CDQQ010006481.133
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001571.134.fna -queryname NZ_CDQQ010001571.134
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001571.134.fna -queryname NZ_CDQQ010001571.134
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001571.134.fna -queryname NZ_CDQQ010001571.134
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008511.135.fna -queryname NZ_CDQQ010008511.135
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008511.135.fna -queryname NZ_CDQQ010008511.135
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008511.135.fna -queryname NZ_CDQQ010008511.135
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002801.136.fna -queryname NZ_CDQQ010002801.136
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002801.136.fna -queryname NZ_CDQQ010002801.136
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002801.136.fna -queryname NZ_CDQQ010002801.136
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000231.137.fna -queryname NZ_CDQQ010000231.137
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000231.137.fna -queryname NZ_CDQQ010000231.137
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000231.137.fna -queryname NZ_CDQQ010000231.137
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007811.138.fna -queryname NZ_CDQQ010007811.138
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007811.138.fna -queryname NZ_CDQQ010007811.138
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007811.138.fna -queryname NZ_CDQQ010007811.138
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001711.13.fna -queryname NZ_CDQQ010001711.13
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001711.13.fna -queryname NZ_CDQQ010001711.13
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001711.13.fna -queryname NZ_CDQQ010001711.13
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006101.139.fna -queryname NZ_CDQQ010006101.139
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006101.139.fna -queryname NZ_CDQQ010006101.139
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006101.139.fna -queryname NZ_CDQQ010006101.139
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001311.140.fna -queryname NZ_CDQQ010001311.140
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001311.140.fna -queryname NZ_CDQQ010001311.140
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001311.140.fna -queryname NZ_CDQQ010001311.140
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007311.141.fna -queryname NZ_CDQQ010007311.141
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007311.141.fna -queryname NZ_CDQQ010007311.141
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007311.141.fna -queryname NZ_CDQQ010007311.141
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004421.142.fna -queryname NZ_CDQQ010004421.142
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004421.142.fna -queryname NZ_CDQQ010004421.142
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004421.142.fna -queryname NZ_CDQQ010004421.142
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000991.143.fna -queryname NZ_CDQQ010000991.143
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000991.143.fna -queryname NZ_CDQQ010000991.143
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000991.143.fna -queryname NZ_CDQQ010000991.143
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008571.144.fna -queryname NZ_CDQQ010008571.144
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008571.144.fna -queryname NZ_CDQQ010008571.144
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008571.144.fna -queryname NZ_CDQQ010008571.144
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004491.145.fna -queryname NZ_CDQQ010004491.145
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004491.145.fna -queryname NZ_CDQQ010004491.145
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004491.145.fna -queryname NZ_CDQQ010004491.145
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002811.146.fna -queryname NZ_CDQQ010002811.146
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002811.146.fna -queryname NZ_CDQQ010002811.146
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002811.146.fna -queryname NZ_CDQQ010002811.146
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007421.147.fna -queryname NZ_CDQQ010007421.147
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007421.147.fna -queryname NZ_CDQQ010007421.147
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007421.147.fna -queryname NZ_CDQQ010007421.147
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007031.148.fna -queryname NZ_CDQQ010007031.148
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007031.148.fna -queryname NZ_CDQQ010007031.148
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007031.148.fna -queryname NZ_CDQQ010007031.148
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003211.14.fna -queryname NZ_CDQQ010003211.14
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003211.14.fna -queryname NZ_CDQQ010003211.14
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003211.14.fna -queryname NZ_CDQQ010003211.14
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003341.149.fna -queryname NZ_CDQQ010003341.149
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003341.149.fna -queryname NZ_CDQQ010003341.149
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003341.149.fna -queryname NZ_CDQQ010003341.149
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001411.150.fna -queryname NZ_CDQQ010001411.150
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001411.150.fna -queryname NZ_CDQQ010001411.150
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001411.150.fna -queryname NZ_CDQQ010001411.150
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007921.151.fna -queryname NZ_CDQQ010007921.151
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007921.151.fna -queryname NZ_CDQQ010007921.151
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007921.151.fna -queryname NZ_CDQQ010007921.151
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007111.152.fna -queryname NZ_CDQQ010007111.152
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007111.152.fna -queryname NZ_CDQQ010007111.152
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007111.152.fna -queryname NZ_CDQQ010007111.152
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006191.153.fna -queryname NZ_CDQQ010006191.153
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006191.153.fna -queryname NZ_CDQQ010006191.153
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006191.153.fna -queryname NZ_CDQQ010006191.153
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006691.154.fna -queryname NZ_CDQQ010006691.154
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006691.154.fna -queryname NZ_CDQQ010006691.154
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006691.154.fna -queryname NZ_CDQQ010006691.154
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004681.155.fna -queryname NZ_CDQQ010004681.155
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004681.155.fna -queryname NZ_CDQQ010004681.155
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004681.155.fna -queryname NZ_CDQQ010004681.155
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002791.156.fna -queryname NZ_CDQQ010002791.156
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002791.156.fna -queryname NZ_CDQQ010002791.156
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002791.156.fna -queryname NZ_CDQQ010002791.156
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001691.157.fna -queryname NZ_CDQQ010001691.157
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001691.157.fna -queryname NZ_CDQQ010001691.157
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001691.157.fna -queryname NZ_CDQQ010001691.157
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004521.158.fna -queryname NZ_CDQQ010004521.158
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004521.158.fna -queryname NZ_CDQQ010004521.158
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004521.158.fna -queryname NZ_CDQQ010004521.158
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002871.15.fna -queryname NZ_CDQQ010002871.15
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002871.15.fna -queryname NZ_CDQQ010002871.15
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002871.15.fna -queryname NZ_CDQQ010002871.15
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007281.159.fna -queryname NZ_CDQQ010007281.159
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007281.159.fna -queryname NZ_CDQQ010007281.159
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007281.159.fna -queryname NZ_CDQQ010007281.159
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010012531.160.fna -queryname NZ_CDQQ010012531.160
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010012531.160.fna -queryname NZ_CDQQ010012531.160
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010012531.160.fna -queryname NZ_CDQQ010012531.160
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004251.161.fna -queryname NZ_CDQQ010004251.161
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004251.161.fna -queryname NZ_CDQQ010004251.161
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004251.161.fna -queryname NZ_CDQQ010004251.161
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001891.162.fna -queryname NZ_CDQQ010001891.162
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001891.162.fna -queryname NZ_CDQQ010001891.162
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001891.162.fna -queryname NZ_CDQQ010001891.162
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006951.163.fna -queryname NZ_CDQQ010006951.163
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006951.163.fna -queryname NZ_CDQQ010006951.163
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006951.163.fna -queryname NZ_CDQQ010006951.163
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004531.164.fna -queryname NZ_CDQQ010004531.164
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004531.164.fna -queryname NZ_CDQQ010004531.164
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004531.164.fna -queryname NZ_CDQQ010004531.164
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005371.165.fna -queryname NZ_CDQQ010005371.165
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005371.165.fna -queryname NZ_CDQQ010005371.165
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005371.165.fna -queryname NZ_CDQQ010005371.165
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003191.166.fna -queryname NZ_CDQQ010003191.166
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003191.166.fna -queryname NZ_CDQQ010003191.166
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003191.166.fna -queryname NZ_CDQQ010003191.166
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003521.167.fna -queryname NZ_CDQQ010003521.167
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003521.167.fna -queryname NZ_CDQQ010003521.167
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003521.167.fna -queryname NZ_CDQQ010003521.167
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009501.168.fna -queryname NZ_CDQQ010009501.168
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009501.168.fna -queryname NZ_CDQQ010009501.168
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009501.168.fna -queryname NZ_CDQQ010009501.168
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001981.16.fna -queryname NZ_CDQQ010001981.16
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001981.16.fna -queryname NZ_CDQQ010001981.16
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001981.16.fna -queryname NZ_CDQQ010001981.16
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003481.169.fna -queryname NZ_CDQQ010003481.169
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003481.169.fna -queryname NZ_CDQQ010003481.169
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003481.169.fna -queryname NZ_CDQQ010003481.169
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002241.170.fna -queryname NZ_CDQQ010002241.170
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002241.170.fna -queryname NZ_CDQQ010002241.170
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002241.170.fna -queryname NZ_CDQQ010002241.170
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003631.171.fna -queryname NZ_CDQQ010003631.171
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003631.171.fna -queryname NZ_CDQQ010003631.171
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003631.171.fna -queryname NZ_CDQQ010003631.171
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004111.172.fna -queryname NZ_CDQQ010004111.172
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004111.172.fna -queryname NZ_CDQQ010004111.172
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004111.172.fna -queryname NZ_CDQQ010004111.172
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002991.173.fna -queryname NZ_CDQQ010002991.173
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002991.173.fna -queryname NZ_CDQQ010002991.173
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002991.173.fna -queryname NZ_CDQQ010002991.173
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007841.174.fna -queryname NZ_CDQQ010007841.174
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007841.174.fna -queryname NZ_CDQQ010007841.174
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007841.174.fna -queryname NZ_CDQQ010007841.174
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000591.175.fna -queryname NZ_CDQQ010000591.175
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000591.175.fna -queryname NZ_CDQQ010000591.175
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000591.175.fna -queryname NZ_CDQQ010000591.175
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003691.176.fna -queryname NZ_CDQQ010003691.176
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003691.176.fna -queryname NZ_CDQQ010003691.176
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003691.176.fna -queryname NZ_CDQQ010003691.176
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002011.177.fna -queryname NZ_CDQQ010002011.177
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002011.177.fna -queryname NZ_CDQQ010002011.177
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002011.177.fna -queryname NZ_CDQQ010002011.177
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000701.178.fna -queryname NZ_CDQQ010000701.178
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000701.178.fna -queryname NZ_CDQQ010000701.178
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000701.178.fna -queryname NZ_CDQQ010000701.178
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005541.17.fna -queryname NZ_CDQQ010005541.17
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005541.17.fna -queryname NZ_CDQQ010005541.17
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005541.17.fna -queryname NZ_CDQQ010005541.17
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000351.179.fna -queryname NZ_CDQQ010000351.179
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000351.179.fna -queryname NZ_CDQQ010000351.179
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000351.179.fna -queryname NZ_CDQQ010000351.179
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003311.180.fna -queryname NZ_CDQQ010003311.180
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003311.180.fna -queryname NZ_CDQQ010003311.180
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003311.180.fna -queryname NZ_CDQQ010003311.180
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001381.181.fna -queryname NZ_CDQQ010001381.181
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001381.181.fna -queryname NZ_CDQQ010001381.181
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001381.181.fna -queryname NZ_CDQQ010001381.181
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000551.182.fna -queryname NZ_CDQQ010000551.182
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000551.182.fna -queryname NZ_CDQQ010000551.182
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000551.182.fna -queryname NZ_CDQQ010000551.182
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002051.183.fna -queryname NZ_CDQQ010002051.183
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002051.183.fna -queryname NZ_CDQQ010002051.183
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002051.183.fna -queryname NZ_CDQQ010002051.183
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000161.184.fna -queryname NZ_CDQQ010000161.184
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000161.184.fna -queryname NZ_CDQQ010000161.184
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000161.184.fna -queryname NZ_CDQQ010000161.184
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004001.185.fna -queryname NZ_CDQQ010004001.185
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004001.185.fna -queryname NZ_CDQQ010004001.185
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004001.185.fna -queryname NZ_CDQQ010004001.185
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009181.186.fna -queryname NZ_CDQQ010009181.186
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009181.186.fna -queryname NZ_CDQQ010009181.186
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009181.186.fna -queryname NZ_CDQQ010009181.186
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005681.187.fna -queryname NZ_CDQQ010005681.187
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005681.187.fna -queryname NZ_CDQQ010005681.187
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005681.187.fna -queryname NZ_CDQQ010005681.187
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004851.188.fna -queryname NZ_CDQQ010004851.188
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004851.188.fna -queryname NZ_CDQQ010004851.188
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004851.188.fna -queryname NZ_CDQQ010004851.188
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004771.18.fna -queryname NZ_CDQQ010004771.18
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004771.18.fna -queryname NZ_CDQQ010004771.18
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004771.18.fna -queryname NZ_CDQQ010004771.18
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007291.189.fna -queryname NZ_CDQQ010007291.189
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007291.189.fna -queryname NZ_CDQQ010007291.189
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007291.189.fna -queryname NZ_CDQQ010007291.189
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000641.190.fna -queryname NZ_CDQQ010000641.190
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000641.190.fna -queryname NZ_CDQQ010000641.190
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000641.190.fna -queryname NZ_CDQQ010000641.190
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003011.191.fna -queryname NZ_CDQQ010003011.191
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003011.191.fna -queryname NZ_CDQQ010003011.191
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003011.191.fna -queryname NZ_CDQQ010003011.191
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007121.192.fna -queryname NZ_CDQQ010007121.192
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007121.192.fna -queryname NZ_CDQQ010007121.192
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007121.192.fna -queryname NZ_CDQQ010007121.192
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002531.193.fna -queryname NZ_CDQQ010002531.193
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002531.193.fna -queryname NZ_CDQQ010002531.193
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002531.193.fna -queryname NZ_CDQQ010002531.193
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005921.194.fna -queryname NZ_CDQQ010005921.194
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005921.194.fna -queryname NZ_CDQQ010005921.194
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005921.194.fna -queryname NZ_CDQQ010005921.194
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004341.195.fna -queryname NZ_CDQQ010004341.195
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004341.195.fna -queryname NZ_CDQQ010004341.195
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004341.195.fna -queryname NZ_CDQQ010004341.195
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003151.196.fna -queryname NZ_CDQQ010003151.196
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003151.196.fna -queryname NZ_CDQQ010003151.196
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003151.196.fna -queryname NZ_CDQQ010003151.196
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000481.197.fna -queryname NZ_CDQQ010000481.197
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000481.197.fna -queryname NZ_CDQQ010000481.197
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000481.197.fna -queryname NZ_CDQQ010000481.197
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000741.198.fna -queryname NZ_CDQQ010000741.198
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000741.198.fna -queryname NZ_CDQQ010000741.198
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000741.198.fna -queryname NZ_CDQQ010000741.198
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_ABJL020000081.1.fna -queryname NZ_ABJL020000081.1
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_ABJL020000081.1.fna -queryname NZ_ABJL020000081.1
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_ABJL020000081.1.fna -queryname NZ_ABJL020000081.1
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_ABJL020000081.1.AOI.fna -queryname NZ_ABJL020000081.1
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_ABJL020000081.1.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_ABJL020000081.1.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -queryname NZ_ABJL020000081.1
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -table NZ_ABJL020000081.1.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009191.19.fna -queryname NZ_CDQQ010009191.19
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009191.19.fna -queryname NZ_CDQQ010009191.19
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009191.19.fna -queryname NZ_CDQQ010009191.19
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001251.199.fna -queryname NZ_CDQQ010001251.199
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001251.199.fna -queryname NZ_CDQQ010001251.199
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001251.199.fna -queryname NZ_CDQQ010001251.199
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001301.200.fna -queryname NZ_CDQQ010001301.200
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001301.200.fna -queryname NZ_CDQQ010001301.200
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001301.200.fna -queryname NZ_CDQQ010001301.200
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005591.201.fna -queryname NZ_CDQQ010005591.201
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005591.201.fna -queryname NZ_CDQQ010005591.201
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005591.201.fna -queryname NZ_CDQQ010005591.201
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008541.202.fna -queryname NZ_CDQQ010008541.202
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008541.202.fna -queryname NZ_CDQQ010008541.202
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008541.202.fna -queryname NZ_CDQQ010008541.202
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002191.203.fna -queryname NZ_CDQQ010002191.203
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002191.203.fna -queryname NZ_CDQQ010002191.203
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002191.203.fna -queryname NZ_CDQQ010002191.203
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006121.204.fna -queryname NZ_CDQQ010006121.204
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006121.204.fna -queryname NZ_CDQQ010006121.204
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006121.204.fna -queryname NZ_CDQQ010006121.204
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002591.205.fna -queryname NZ_CDQQ010002591.205
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002591.205.fna -queryname NZ_CDQQ010002591.205
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002591.205.fna -queryname NZ_CDQQ010002591.205
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005161.206.fna -queryname NZ_CDQQ010005161.206
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005161.206.fna -queryname NZ_CDQQ010005161.206
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005161.206.fna -queryname NZ_CDQQ010005161.206
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003171.207.fna -queryname NZ_CDQQ010003171.207
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003171.207.fna -queryname NZ_CDQQ010003171.207
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003171.207.fna -queryname NZ_CDQQ010003171.207
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003621.208.fna -queryname NZ_CDQQ010003621.208
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003621.208.fna -queryname NZ_CDQQ010003621.208
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003621.208.fna -queryname NZ_CDQQ010003621.208
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001781.20.fna -queryname NZ_CDQQ010001781.20
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001781.20.fna -queryname NZ_CDQQ010001781.20
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001781.20.fna -queryname NZ_CDQQ010001781.20
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006281.209.fna -queryname NZ_CDQQ010006281.209
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006281.209.fna -queryname NZ_CDQQ010006281.209
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006281.209.fna -queryname NZ_CDQQ010006281.209
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007791.210.fna -queryname NZ_CDQQ010007791.210
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007791.210.fna -queryname NZ_CDQQ010007791.210
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007791.210.fna -queryname NZ_CDQQ010007791.210
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004081.211.fna -queryname NZ_CDQQ010004081.211
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004081.211.fna -queryname NZ_CDQQ010004081.211
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004081.211.fna -queryname NZ_CDQQ010004081.211
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007481.212.fna -queryname NZ_CDQQ010007481.212
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007481.212.fna -queryname NZ_CDQQ010007481.212
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007481.212.fna -queryname NZ_CDQQ010007481.212
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005611.213.fna -queryname NZ_CDQQ010005611.213
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005611.213.fna -queryname NZ_CDQQ010005611.213
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005611.213.fna -queryname NZ_CDQQ010005611.213
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001701.214.fna -queryname NZ_CDQQ010001701.214
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001701.214.fna -queryname NZ_CDQQ010001701.214
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001701.214.fna -queryname NZ_CDQQ010001701.214
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002431.215.fna -queryname NZ_CDQQ010002431.215
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002431.215.fna -queryname NZ_CDQQ010002431.215
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002431.215.fna -queryname NZ_CDQQ010002431.215
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002171.216.fna -queryname NZ_CDQQ010002171.216
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002171.216.fna -queryname NZ_CDQQ010002171.216
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002171.216.fna -queryname NZ_CDQQ010002171.216
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003731.217.fna -queryname NZ_CDQQ010003731.217
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003731.217.fna -queryname NZ_CDQQ010003731.217
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003731.217.fna -queryname NZ_CDQQ010003731.217
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000421.218.fna -queryname NZ_CDQQ010000421.218
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000421.218.fna -queryname NZ_CDQQ010000421.218
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000421.218.fna -queryname NZ_CDQQ010000421.218
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006311.21.fna -queryname NZ_CDQQ010006311.21
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006311.21.fna -queryname NZ_CDQQ010006311.21
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006311.21.fna -queryname NZ_CDQQ010006311.21
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000681.219.fna -queryname NZ_CDQQ010000681.219
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000681.219.fna -queryname NZ_CDQQ010000681.219
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000681.219.fna -queryname NZ_CDQQ010000681.219
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007721.220.fna -queryname NZ_CDQQ010007721.220
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007721.220.fna -queryname NZ_CDQQ010007721.220
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007721.220.fna -queryname NZ_CDQQ010007721.220
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008101.221.fna -queryname NZ_CDQQ010008101.221
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008101.221.fna -queryname NZ_CDQQ010008101.221
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008101.221.fna -queryname NZ_CDQQ010008101.221
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007331.222.fna -queryname NZ_CDQQ010007331.222
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007331.222.fna -queryname NZ_CDQQ010007331.222
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007331.222.fna -queryname NZ_CDQQ010007331.222
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003251.223.fna -queryname NZ_CDQQ010003251.223
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003251.223.fna -queryname NZ_CDQQ010003251.223
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003251.223.fna -queryname NZ_CDQQ010003251.223
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004751.224.fna -queryname NZ_CDQQ010004751.224
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004751.224.fna -queryname NZ_CDQQ010004751.224
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004751.224.fna -queryname NZ_CDQQ010004751.224
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002881.225.fna -queryname NZ_CDQQ010002881.225
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002881.225.fna -queryname NZ_CDQQ010002881.225
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002881.225.fna -queryname NZ_CDQQ010002881.225
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002771.226.fna -queryname NZ_CDQQ010002771.226
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002771.226.fna -queryname NZ_CDQQ010002771.226
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002771.226.fna -queryname NZ_CDQQ010002771.226
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002701.227.fna -queryname NZ_CDQQ010002701.227
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002701.227.fna -queryname NZ_CDQQ010002701.227
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002701.227.fna -queryname NZ_CDQQ010002701.227
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001071.228.fna -queryname NZ_CDQQ010001071.228
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001071.228.fna -queryname NZ_CDQQ010001071.228
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001071.228.fna -queryname NZ_CDQQ010001071.228
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004371.22.fna -queryname NZ_CDQQ010004371.22
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004371.22.fna -queryname NZ_CDQQ010004371.22
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004371.22.fna -queryname NZ_CDQQ010004371.22
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000971.229.fna -queryname NZ_CDQQ010000971.229
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000971.229.fna -queryname NZ_CDQQ010000971.229
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000971.229.fna -queryname NZ_CDQQ010000971.229
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003641.230.fna -queryname NZ_CDQQ010003641.230
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003641.230.fna -queryname NZ_CDQQ010003641.230
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003641.230.fna -queryname NZ_CDQQ010003641.230
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003751.231.fna -queryname NZ_CDQQ010003751.231
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003751.231.fna -queryname NZ_CDQQ010003751.231
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003751.231.fna -queryname NZ_CDQQ010003751.231
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003141.232.fna -queryname NZ_CDQQ010003141.232
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003141.232.fna -queryname NZ_CDQQ010003141.232
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003141.232.fna -queryname NZ_CDQQ010003141.232
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000821.233.fna -queryname NZ_CDQQ010000821.233
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000821.233.fna -queryname NZ_CDQQ010000821.233
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000821.233.fna -queryname NZ_CDQQ010000821.233
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002361.234.fna -queryname NZ_CDQQ010002361.234
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002361.234.fna -queryname NZ_CDQQ010002361.234
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002361.234.fna -queryname NZ_CDQQ010002361.234
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002401.235.fna -queryname NZ_CDQQ010002401.235
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002401.235.fna -queryname NZ_CDQQ010002401.235
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002401.235.fna -queryname NZ_CDQQ010002401.235
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007401.236.fna -queryname NZ_CDQQ010007401.236
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007401.236.fna -queryname NZ_CDQQ010007401.236
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007401.236.fna -queryname NZ_CDQQ010007401.236
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004791.237.fna -queryname NZ_CDQQ010004791.237
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004791.237.fna -queryname NZ_CDQQ010004791.237
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004791.237.fna -queryname NZ_CDQQ010004791.237
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007951.238.fna -queryname NZ_CDQQ010007951.238
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007951.238.fna -queryname NZ_CDQQ010007951.238
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007951.238.fna -queryname NZ_CDQQ010007951.238
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001121.23.fna -queryname NZ_CDQQ010001121.23
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001121.23.fna -queryname NZ_CDQQ010001121.23
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001121.23.fna -queryname NZ_CDQQ010001121.23
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000631.239.fna -queryname NZ_CDQQ010000631.239
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000631.239.fna -queryname NZ_CDQQ010000631.239
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000631.239.fna -queryname NZ_CDQQ010000631.239
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002581.240.fna -queryname NZ_CDQQ010002581.240
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002581.240.fna -queryname NZ_CDQQ010002581.240
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002581.240.fna -queryname NZ_CDQQ010002581.240
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007741.241.fna -queryname NZ_CDQQ010007741.241
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007741.241.fna -queryname NZ_CDQQ010007741.241
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007741.241.fna -queryname NZ_CDQQ010007741.241
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002381.242.fna -queryname NZ_CDQQ010002381.242
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002381.242.fna -queryname NZ_CDQQ010002381.242
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002381.242.fna -queryname NZ_CDQQ010002381.242
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004561.243.fna -queryname NZ_CDQQ010004561.243
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004561.243.fna -queryname NZ_CDQQ010004561.243
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004561.243.fna -queryname NZ_CDQQ010004561.243
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006301.244.fna -queryname NZ_CDQQ010006301.244
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006301.244.fna -queryname NZ_CDQQ010006301.244
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006301.244.fna -queryname NZ_CDQQ010006301.244
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001811.245.fna -queryname NZ_CDQQ010001811.245
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001811.245.fna -queryname NZ_CDQQ010001811.245
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001811.245.fna -queryname NZ_CDQQ010001811.245
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001851.246.fna -queryname NZ_CDQQ010001851.246
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001851.246.fna -queryname NZ_CDQQ010001851.246
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001851.246.fna -queryname NZ_CDQQ010001851.246
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003601.247.fna -queryname NZ_CDQQ010003601.247
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003601.247.fna -queryname NZ_CDQQ010003601.247
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003601.247.fna -queryname NZ_CDQQ010003601.247
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001481.248.fna -queryname NZ_CDQQ010001481.248
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001481.248.fna -queryname NZ_CDQQ010001481.248
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001481.248.fna -queryname NZ_CDQQ010001481.248
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008271.24.fna -queryname NZ_CDQQ010008271.24
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008271.24.fna -queryname NZ_CDQQ010008271.24
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008271.24.fna -queryname NZ_CDQQ010008271.24
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002501.249.fna -queryname NZ_CDQQ010002501.249
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002501.249.fna -queryname NZ_CDQQ010002501.249
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002501.249.fna -queryname NZ_CDQQ010002501.249
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001351.250.fna -queryname NZ_CDQQ010001351.250
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001351.250.fna -queryname NZ_CDQQ010001351.250
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001351.250.fna -queryname NZ_CDQQ010001351.250
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002521.251.fna -queryname NZ_CDQQ010002521.251
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002521.251.fna -queryname NZ_CDQQ010002521.251
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002521.251.fna -queryname NZ_CDQQ010002521.251
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000341.252.fna -queryname NZ_CDQQ010000341.252
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000341.252.fna -queryname NZ_CDQQ010000341.252
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000341.252.fna -queryname NZ_CDQQ010000341.252
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008551.253.fna -queryname NZ_CDQQ010008551.253
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008551.253.fna -queryname NZ_CDQQ010008551.253
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008551.253.fna -queryname NZ_CDQQ010008551.253
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006911.254.fna -queryname NZ_CDQQ010006911.254
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006911.254.fna -queryname NZ_CDQQ010006911.254
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006911.254.fna -queryname NZ_CDQQ010006911.254
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008001.255.fna -queryname NZ_CDQQ010008001.255
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008001.255.fna -queryname NZ_CDQQ010008001.255
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008001.255.fna -queryname NZ_CDQQ010008001.255
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009511.256.fna -queryname NZ_CDQQ010009511.256
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009511.256.fna -queryname NZ_CDQQ010009511.256
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009511.256.fna -queryname NZ_CDQQ010009511.256
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008491.257.fna -queryname NZ_CDQQ010008491.257
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008491.257.fna -queryname NZ_CDQQ010008491.257
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008491.257.fna -queryname NZ_CDQQ010008491.257
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000951.258.fna -queryname NZ_CDQQ010000951.258
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000951.258.fna -queryname NZ_CDQQ010000951.258
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000951.258.fna -queryname NZ_CDQQ010000951.258
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009221.25.fna -queryname NZ_CDQQ010009221.25
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009221.25.fna -queryname NZ_CDQQ010009221.25
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009221.25.fna -queryname NZ_CDQQ010009221.25
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003711.259.fna -queryname NZ_CDQQ010003711.259
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003711.259.fna -queryname NZ_CDQQ010003711.259
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003711.259.fna -queryname NZ_CDQQ010003711.259
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006541.260.fna -queryname NZ_CDQQ010006541.260
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006541.260.fna -queryname NZ_CDQQ010006541.260
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006541.260.fna -queryname NZ_CDQQ010006541.260
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005501.261.fna -queryname NZ_CDQQ010005501.261
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005501.261.fna -queryname NZ_CDQQ010005501.261
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005501.261.fna -queryname NZ_CDQQ010005501.261
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005271.262.fna -queryname NZ_CDQQ010005271.262
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005271.262.fna -queryname NZ_CDQQ010005271.262
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005271.262.fna -queryname NZ_CDQQ010005271.262
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004591.263.fna -queryname NZ_CDQQ010004591.263
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004591.263.fna -queryname NZ_CDQQ010004591.263
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004591.263.fna -queryname NZ_CDQQ010004591.263
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000911.264.fna -queryname NZ_CDQQ010000911.264
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000911.264.fna -queryname NZ_CDQQ010000911.264
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000911.264.fna -queryname NZ_CDQQ010000911.264
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004541.265.fna -queryname NZ_CDQQ010004541.265
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004541.265.fna -queryname NZ_CDQQ010004541.265
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004541.265.fna -queryname NZ_CDQQ010004541.265
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006611.266.fna -queryname NZ_CDQQ010006611.266
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006611.266.fna -queryname NZ_CDQQ010006611.266
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006611.266.fna -queryname NZ_CDQQ010006611.266
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003541.267.fna -queryname NZ_CDQQ010003541.267
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003541.267.fna -queryname NZ_CDQQ010003541.267
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003541.267.fna -queryname NZ_CDQQ010003541.267
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004841.268.fna -queryname NZ_CDQQ010004841.268
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004841.268.fna -queryname NZ_CDQQ010004841.268
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004841.268.fna -queryname NZ_CDQQ010004841.268
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005081.26.fna -queryname NZ_CDQQ010005081.26
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005081.26.fna -queryname NZ_CDQQ010005081.26
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005081.26.fna -queryname NZ_CDQQ010005081.26
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002751.269.fna -queryname NZ_CDQQ010002751.269
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002751.269.fna -queryname NZ_CDQQ010002751.269
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002751.269.fna -queryname NZ_CDQQ010002751.269
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003021.270.fna -queryname NZ_CDQQ010003021.270
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003021.270.fna -queryname NZ_CDQQ010003021.270
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003021.270.fna -queryname NZ_CDQQ010003021.270
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001391.271.fna -queryname NZ_CDQQ010001391.271
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001391.271.fna -queryname NZ_CDQQ010001391.271
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001391.271.fna -queryname NZ_CDQQ010001391.271
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005881.272.fna -queryname NZ_CDQQ010005881.272
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005881.272.fna -queryname NZ_CDQQ010005881.272
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005881.272.fna -queryname NZ_CDQQ010005881.272
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009261.273.fna -queryname NZ_CDQQ010009261.273
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009261.273.fna -queryname NZ_CDQQ010009261.273
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009261.273.fna -queryname NZ_CDQQ010009261.273
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001191.274.fna -queryname NZ_CDQQ010001191.274
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001191.274.fna -queryname NZ_CDQQ010001191.274
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001191.274.fna -queryname NZ_CDQQ010001191.274
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004171.275.fna -queryname NZ_CDQQ010004171.275
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004171.275.fna -queryname NZ_CDQQ010004171.275
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004171.275.fna -queryname NZ_CDQQ010004171.275
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001001.276.fna -queryname NZ_CDQQ010001001.276
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001001.276.fna -queryname NZ_CDQQ010001001.276
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001001.276.fna -queryname NZ_CDQQ010001001.276
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001061.277.fna -queryname NZ_CDQQ010001061.277
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001061.277.fna -queryname NZ_CDQQ010001061.277
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001061.277.fna -queryname NZ_CDQQ010001061.277
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006681.278.fna -queryname NZ_CDQQ010006681.278
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006681.278.fna -queryname NZ_CDQQ010006681.278
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006681.278.fna -queryname NZ_CDQQ010006681.278
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001681.27.fna -queryname NZ_CDQQ010001681.27
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001681.27.fna -queryname NZ_CDQQ010001681.27
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001681.27.fna -queryname NZ_CDQQ010001681.27
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000931.279.fna -queryname NZ_CDQQ010000931.279
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000931.279.fna -queryname NZ_CDQQ010000931.279
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000931.279.fna -queryname NZ_CDQQ010000931.279
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002731.280.fna -queryname NZ_CDQQ010002731.280
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002731.280.fna -queryname NZ_CDQQ010002731.280
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002731.280.fna -queryname NZ_CDQQ010002731.280
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000061.281.fna -queryname NZ_CDQQ010000061.281
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000061.281.fna -queryname NZ_CDQQ010000061.281
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000061.281.fna -queryname NZ_CDQQ010000061.281
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006271.282.fna -queryname NZ_CDQQ010006271.282
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006271.282.fna -queryname NZ_CDQQ010006271.282
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006271.282.fna -queryname NZ_CDQQ010006271.282
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002481.283.fna -queryname NZ_CDQQ010002481.283
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002481.283.fna -queryname NZ_CDQQ010002481.283
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002481.283.fna -queryname NZ_CDQQ010002481.283
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006461.284.fna -queryname NZ_CDQQ010006461.284
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006461.284.fna -queryname NZ_CDQQ010006461.284
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006461.284.fna -queryname NZ_CDQQ010006461.284
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000811.285.fna -queryname NZ_CDQQ010000811.285
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000811.285.fna -queryname NZ_CDQQ010000811.285
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000811.285.fna -queryname NZ_CDQQ010000811.285
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008561.286.fna -queryname NZ_CDQQ010008561.286
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008561.286.fna -queryname NZ_CDQQ010008561.286
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008561.286.fna -queryname NZ_CDQQ010008561.286
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005971.287.fna -queryname NZ_CDQQ010005971.287
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005971.287.fna -queryname NZ_CDQQ010005971.287
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005971.287.fna -queryname NZ_CDQQ010005971.287
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007831.288.fna -queryname NZ_CDQQ010007831.288
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007831.288.fna -queryname NZ_CDQQ010007831.288
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007831.288.fna -queryname NZ_CDQQ010007831.288
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002671.28.fna -queryname NZ_CDQQ010002671.28
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002671.28.fna -queryname NZ_CDQQ010002671.28
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002671.28.fna -queryname NZ_CDQQ010002671.28
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006061.289.fna -queryname NZ_CDQQ010006061.289
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006061.289.fna -queryname NZ_CDQQ010006061.289
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006061.289.fna -queryname NZ_CDQQ010006061.289
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006231.290.fna -queryname NZ_CDQQ010006231.290
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006231.290.fna -queryname NZ_CDQQ010006231.290
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006231.290.fna -queryname NZ_CDQQ010006231.290
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002541.291.fna -queryname NZ_CDQQ010002541.291
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002541.291.fna -queryname NZ_CDQQ010002541.291
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002541.291.fna -queryname NZ_CDQQ010002541.291
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005761.292.fna -queryname NZ_CDQQ010005761.292
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005761.292.fna -queryname NZ_CDQQ010005761.292
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005761.292.fna -queryname NZ_CDQQ010005761.292
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007641.293.fna -queryname NZ_CDQQ010007641.293
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007641.293.fna -queryname NZ_CDQQ010007641.293
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007641.293.fna -queryname NZ_CDQQ010007641.293
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001861.294.fna -queryname NZ_CDQQ010001861.294
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001861.294.fna -queryname NZ_CDQQ010001861.294
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001861.294.fna -queryname NZ_CDQQ010001861.294
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003851.295.fna -queryname NZ_CDQQ010003851.295
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003851.295.fna -queryname NZ_CDQQ010003851.295
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003851.295.fna -queryname NZ_CDQQ010003851.295
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000111.296.fna -queryname NZ_CDQQ010000111.296
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000111.296.fna -queryname NZ_CDQQ010000111.296
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000111.296.fna -queryname NZ_CDQQ010000111.296
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006801.297.fna -queryname NZ_CDQQ010006801.297
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006801.297.fna -queryname NZ_CDQQ010006801.297
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006801.297.fna -queryname NZ_CDQQ010006801.297
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001951.298.fna -queryname NZ_CDQQ010001951.298
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001951.298.fna -queryname NZ_CDQQ010001951.298
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001951.298.fna -queryname NZ_CDQQ010001951.298
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_ABJL020000051.2.fna -queryname NZ_ABJL020000051.2
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_ABJL020000051.2.fna -queryname NZ_ABJL020000051.2
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_ABJL020000051.2.fna -queryname NZ_ABJL020000051.2
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006201.29.fna -queryname NZ_CDQQ010006201.29
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006201.29.fna -queryname NZ_CDQQ010006201.29
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006201.29.fna -queryname NZ_CDQQ010006201.29
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006361.299.fna -queryname NZ_CDQQ010006361.299
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006361.299.fna -queryname NZ_CDQQ010006361.299
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006361.299.fna -queryname NZ_CDQQ010006361.299
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005061.300.fna -queryname NZ_CDQQ010005061.300
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005061.300.fna -queryname NZ_CDQQ010005061.300
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005061.300.fna -queryname NZ_CDQQ010005061.300
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003381.301.fna -queryname NZ_CDQQ010003381.301
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003381.301.fna -queryname NZ_CDQQ010003381.301
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003381.301.fna -queryname NZ_CDQQ010003381.301
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001611.302.fna -queryname NZ_CDQQ010001611.302
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001611.302.fna -queryname NZ_CDQQ010001611.302
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001611.302.fna -queryname NZ_CDQQ010001611.302
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001521.303.fna -queryname NZ_CDQQ010001521.303
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001521.303.fna -queryname NZ_CDQQ010001521.303
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001521.303.fna -queryname NZ_CDQQ010001521.303
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004061.304.fna -queryname NZ_CDQQ010004061.304
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004061.304.fna -queryname NZ_CDQQ010004061.304
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004061.304.fna -queryname NZ_CDQQ010004061.304
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001761.305.fna -queryname NZ_CDQQ010001761.305
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001761.305.fna -queryname NZ_CDQQ010001761.305
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001761.305.fna -queryname NZ_CDQQ010001761.305
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001631.306.fna -queryname NZ_CDQQ010001631.306
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001631.306.fna -queryname NZ_CDQQ010001631.306
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001631.306.fna -queryname NZ_CDQQ010001631.306
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003801.307.fna -queryname NZ_CDQQ010003801.307
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003801.307.fna -queryname NZ_CDQQ010003801.307
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003801.307.fna -queryname NZ_CDQQ010003801.307
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004031.308.fna -queryname NZ_CDQQ010004031.308
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004031.308.fna -queryname NZ_CDQQ010004031.308
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004031.308.fna -queryname NZ_CDQQ010004031.308
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005671.30.fna -queryname NZ_CDQQ010005671.30
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005671.30.fna -queryname NZ_CDQQ010005671.30
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005671.30.fna -queryname NZ_CDQQ010005671.30
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001111.309.fna -queryname NZ_CDQQ010001111.309
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001111.309.fna -queryname NZ_CDQQ010001111.309
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001111.309.fna -queryname NZ_CDQQ010001111.309
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009271.310.fna -queryname NZ_CDQQ010009271.310
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009271.310.fna -queryname NZ_CDQQ010009271.310
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009271.310.fna -queryname NZ_CDQQ010009271.310
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007301.311.fna -queryname NZ_CDQQ010007301.311
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007301.311.fna -queryname NZ_CDQQ010007301.311
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007301.311.fna -queryname NZ_CDQQ010007301.311
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005221.312.fna -queryname NZ_CDQQ010005221.312
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005221.312.fna -queryname NZ_CDQQ010005221.312
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005221.312.fna -queryname NZ_CDQQ010005221.312
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001431.313.fna -queryname NZ_CDQQ010001431.313
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001431.313.fna -queryname NZ_CDQQ010001431.313
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001431.313.fna -queryname NZ_CDQQ010001431.313
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007201.314.fna -queryname NZ_CDQQ010007201.314
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007201.314.fna -queryname NZ_CDQQ010007201.314
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007201.314.fna -queryname NZ_CDQQ010007201.314
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003181.315.fna -queryname NZ_CDQQ010003181.315
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003181.315.fna -queryname NZ_CDQQ010003181.315
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003181.315.fna -queryname NZ_CDQQ010003181.315
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006721.316.fna -queryname NZ_CDQQ010006721.316
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006721.316.fna -queryname NZ_CDQQ010006721.316
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006721.316.fna -queryname NZ_CDQQ010006721.316
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000721.317.fna -queryname NZ_CDQQ010000721.317
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000721.317.fna -queryname NZ_CDQQ010000721.317
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000721.317.fna -queryname NZ_CDQQ010000721.317
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000471.318.fna -queryname NZ_CDQQ010000471.318
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000471.318.fna -queryname NZ_CDQQ010000471.318
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000471.318.fna -queryname NZ_CDQQ010000471.318
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001881.31.fna -queryname NZ_CDQQ010001881.31
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001881.31.fna -queryname NZ_CDQQ010001881.31
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001881.31.fna -queryname NZ_CDQQ010001881.31
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001231.319.fna -queryname NZ_CDQQ010001231.319
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001231.319.fna -queryname NZ_CDQQ010001231.319
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001231.319.fna -queryname NZ_CDQQ010001231.319
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010012221.320.fna -queryname NZ_CDQQ010012221.320
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010012221.320.fna -queryname NZ_CDQQ010012221.320
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010012221.320.fna -queryname NZ_CDQQ010012221.320
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001801.321.fna -queryname NZ_CDQQ010001801.321
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001801.321.fna -queryname NZ_CDQQ010001801.321
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001801.321.fna -queryname NZ_CDQQ010001801.321
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007181.322.fna -queryname NZ_CDQQ010007181.322
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007181.322.fna -queryname NZ_CDQQ010007181.322
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007181.322.fna -queryname NZ_CDQQ010007181.322
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006041.323.fna -queryname NZ_CDQQ010006041.323
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006041.323.fna -queryname NZ_CDQQ010006041.323
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006041.323.fna -queryname NZ_CDQQ010006041.323
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006491.324.fna -queryname NZ_CDQQ010006491.324
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006491.324.fna -queryname NZ_CDQQ010006491.324
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006491.324.fna -queryname NZ_CDQQ010006491.324
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003611.325.fna -queryname NZ_CDQQ010003611.325
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003611.325.fna -queryname NZ_CDQQ010003611.325
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003611.325.fna -queryname NZ_CDQQ010003611.325
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005551.326.fna -queryname NZ_CDQQ010005551.326
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005551.326.fna -queryname NZ_CDQQ010005551.326
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005551.326.fna -queryname NZ_CDQQ010005551.326
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006351.327.fna -queryname NZ_CDQQ010006351.327
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006351.327.fna -queryname NZ_CDQQ010006351.327
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006351.327.fna -queryname NZ_CDQQ010006351.327
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008131.328.fna -queryname NZ_CDQQ010008131.328
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008131.328.fna -queryname NZ_CDQQ010008131.328
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008131.328.fna -queryname NZ_CDQQ010008131.328
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007941.32.fna -queryname NZ_CDQQ010007941.32
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007941.32.fna -queryname NZ_CDQQ010007941.32
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007941.32.fna -queryname NZ_CDQQ010007941.32
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002271.329.fna -queryname NZ_CDQQ010002271.329
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002271.329.fna -queryname NZ_CDQQ010002271.329
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002271.329.fna -queryname NZ_CDQQ010002271.329
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009211.330.fna -queryname NZ_CDQQ010009211.330
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009211.330.fna -queryname NZ_CDQQ010009211.330
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009211.330.fna -queryname NZ_CDQQ010009211.330
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006151.331.fna -queryname NZ_CDQQ010006151.331
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006151.331.fna -queryname NZ_CDQQ010006151.331
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006151.331.fna -queryname NZ_CDQQ010006151.331
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001341.332.fna -queryname NZ_CDQQ010001341.332
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001341.332.fna -queryname NZ_CDQQ010001341.332
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001341.332.fna -queryname NZ_CDQQ010001341.332
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006891.333.fna -queryname NZ_CDQQ010006891.333
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006891.333.fna -queryname NZ_CDQQ010006891.333
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006891.333.fna -queryname NZ_CDQQ010006891.333
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010010251.334.fna -queryname NZ_CDQQ010010251.334
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010010251.334.fna -queryname NZ_CDQQ010010251.334
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010010251.334.fna -queryname NZ_CDQQ010010251.334
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009111.335.fna -queryname NZ_CDQQ010009111.335
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009111.335.fna -queryname NZ_CDQQ010009111.335
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009111.335.fna -queryname NZ_CDQQ010009111.335
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001101.336.fna -queryname NZ_CDQQ010001101.336
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001101.336.fna -queryname NZ_CDQQ010001101.336
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001101.336.fna -queryname NZ_CDQQ010001101.336
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003561.337.fna -queryname NZ_CDQQ010003561.337
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003561.337.fna -queryname NZ_CDQQ010003561.337
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003561.337.fna -queryname NZ_CDQQ010003561.337
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000091.338.fna -queryname NZ_CDQQ010000091.338
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000091.338.fna -queryname NZ_CDQQ010000091.338
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000091.338.fna -queryname NZ_CDQQ010000091.338
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004011.33.fna -queryname NZ_CDQQ010004011.33
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004011.33.fna -queryname NZ_CDQQ010004011.33
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004011.33.fna -queryname NZ_CDQQ010004011.33
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006321.339.fna -queryname NZ_CDQQ010006321.339
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006321.339.fna -queryname NZ_CDQQ010006321.339
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006321.339.fna -queryname NZ_CDQQ010006321.339
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004461.340.fna -queryname NZ_CDQQ010004461.340
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004461.340.fna -queryname NZ_CDQQ010004461.340
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004461.340.fna -queryname NZ_CDQQ010004461.340
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000101.341.fna -queryname NZ_CDQQ010000101.341
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000101.341.fna -queryname NZ_CDQQ010000101.341
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000101.341.fna -queryname NZ_CDQQ010000101.341
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000371.342.fna -queryname NZ_CDQQ010000371.342
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000371.342.fna -queryname NZ_CDQQ010000371.342
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000371.342.fna -queryname NZ_CDQQ010000371.342
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004721.343.fna -queryname NZ_CDQQ010004721.343
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004721.343.fna -queryname NZ_CDQQ010004721.343
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004721.343.fna -queryname NZ_CDQQ010004721.343
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001271.344.fna -queryname NZ_CDQQ010001271.344
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001271.344.fna -queryname NZ_CDQQ010001271.344
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001271.344.fna -queryname NZ_CDQQ010001271.344
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003701.345.fna -queryname NZ_CDQQ010003701.345
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003701.345.fna -queryname NZ_CDQQ010003701.345
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003701.345.fna -queryname NZ_CDQQ010003701.345
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004101.346.fna -queryname NZ_CDQQ010004101.346
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004101.346.fna -queryname NZ_CDQQ010004101.346
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004101.346.fna -queryname NZ_CDQQ010004101.346
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006081.347.fna -queryname NZ_CDQQ010006081.347
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006081.347.fna -queryname NZ_CDQQ010006081.347
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006081.347.fna -queryname NZ_CDQQ010006081.347
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003161.348.fna -queryname NZ_CDQQ010003161.348
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003161.348.fna -queryname NZ_CDQQ010003161.348
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003161.348.fna -queryname NZ_CDQQ010003161.348
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006751.34.fna -queryname NZ_CDQQ010006751.34
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006751.34.fna -queryname NZ_CDQQ010006751.34
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006751.34.fna -queryname NZ_CDQQ010006751.34
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006471.349.fna -queryname NZ_CDQQ010006471.349
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006471.349.fna -queryname NZ_CDQQ010006471.349
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006471.349.fna -queryname NZ_CDQQ010006471.349
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000801.350.fna -queryname NZ_CDQQ010000801.350
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000801.350.fna -queryname NZ_CDQQ010000801.350
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000801.350.fna -queryname NZ_CDQQ010000801.350
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007621.351.fna -queryname NZ_CDQQ010007621.351
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007621.351.fna -queryname NZ_CDQQ010007621.351
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007621.351.fna -queryname NZ_CDQQ010007621.351
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003771.352.fna -queryname NZ_CDQQ010003771.352
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003771.352.fna -queryname NZ_CDQQ010003771.352
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003771.352.fna -queryname NZ_CDQQ010003771.352
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008611.353.fna -queryname NZ_CDQQ010008611.353
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008611.353.fna -queryname NZ_CDQQ010008611.353
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008611.353.fna -queryname NZ_CDQQ010008611.353
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001901.354.fna -queryname NZ_CDQQ010001901.354
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001901.354.fna -queryname NZ_CDQQ010001901.354
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001901.354.fna -queryname NZ_CDQQ010001901.354
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004221.355.fna -queryname NZ_CDQQ010004221.355
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004221.355.fna -queryname NZ_CDQQ010004221.355
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004221.355.fna -queryname NZ_CDQQ010004221.355
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008421.356.fna -queryname NZ_CDQQ010008421.356
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008421.356.fna -queryname NZ_CDQQ010008421.356
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008421.356.fna -queryname NZ_CDQQ010008421.356
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010010051.357.fna -queryname NZ_CDQQ010010051.357
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010010051.357.fna -queryname NZ_CDQQ010010051.357
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010010051.357.fna -queryname NZ_CDQQ010010051.357
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004381.358.fna -queryname NZ_CDQQ010004381.358
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004381.358.fna -queryname NZ_CDQQ010004381.358
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004381.358.fna -queryname NZ_CDQQ010004381.358
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006341.35.fna -queryname NZ_CDQQ010006341.35
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006341.35.fna -queryname NZ_CDQQ010006341.35
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006341.35.fna -queryname NZ_CDQQ010006341.35
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004611.359.fna -queryname NZ_CDQQ010004611.359
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004611.359.fna -queryname NZ_CDQQ010004611.359
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004611.359.fna -queryname NZ_CDQQ010004611.359
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002831.360.fna -queryname NZ_CDQQ010002831.360
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002831.360.fna -queryname NZ_CDQQ010002831.360
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002831.360.fna -queryname NZ_CDQQ010002831.360
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002641.361.fna -queryname NZ_CDQQ010002641.361
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002641.361.fna -queryname NZ_CDQQ010002641.361
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002641.361.fna -queryname NZ_CDQQ010002641.361
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009831.362.fna -queryname NZ_CDQQ010009831.362
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009831.362.fna -queryname NZ_CDQQ010009831.362
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009831.362.fna -queryname NZ_CDQQ010009831.362
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004161.363.fna -queryname NZ_CDQQ010004161.363
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004161.363.fna -queryname NZ_CDQQ010004161.363
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004161.363.fna -queryname NZ_CDQQ010004161.363
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002491.364.fna -queryname NZ_CDQQ010002491.364
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002491.364.fna -queryname NZ_CDQQ010002491.364
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002491.364.fna -queryname NZ_CDQQ010002491.364
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004801.365.fna -queryname NZ_CDQQ010004801.365
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004801.365.fna -queryname NZ_CDQQ010004801.365
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004801.365.fna -queryname NZ_CDQQ010004801.365
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007041.366.fna -queryname NZ_CDQQ010007041.366
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007041.366.fna -queryname NZ_CDQQ010007041.366
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007041.366.fna -queryname NZ_CDQQ010007041.366
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006591.367.fna -queryname NZ_CDQQ010006591.367
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006591.367.fna -queryname NZ_CDQQ010006591.367
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006591.367.fna -queryname NZ_CDQQ010006591.367
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007161.368.fna -queryname NZ_CDQQ010007161.368
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007161.368.fna -queryname NZ_CDQQ010007161.368
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007161.368.fna -queryname NZ_CDQQ010007161.368
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004731.36.fna -queryname NZ_CDQQ010004731.36
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004731.36.fna -queryname NZ_CDQQ010004731.36
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004731.36.fna -queryname NZ_CDQQ010004731.36
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005031.369.fna -queryname NZ_CDQQ010005031.369
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005031.369.fna -queryname NZ_CDQQ010005031.369
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005031.369.fna -queryname NZ_CDQQ010005031.369
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006871.370.fna -queryname NZ_CDQQ010006871.370
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006871.370.fna -queryname NZ_CDQQ010006871.370
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006871.370.fna -queryname NZ_CDQQ010006871.370
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002981.371.fna -queryname NZ_CDQQ010002981.371
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002981.371.fna -queryname NZ_CDQQ010002981.371
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002981.371.fna -queryname NZ_CDQQ010002981.371
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008241.372.fna -queryname NZ_CDQQ010008241.372
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008241.372.fna -queryname NZ_CDQQ010008241.372
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008241.372.fna -queryname NZ_CDQQ010008241.372
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002301.373.fna -queryname NZ_CDQQ010002301.373
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002301.373.fna -queryname NZ_CDQQ010002301.373
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002301.373.fna -queryname NZ_CDQQ010002301.373
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005181.374.fna -queryname NZ_CDQQ010005181.374
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005181.374.fna -queryname NZ_CDQQ010005181.374
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005181.374.fna -queryname NZ_CDQQ010005181.374
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001841.375.fna -queryname NZ_CDQQ010001841.375
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001841.375.fna -queryname NZ_CDQQ010001841.375
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001841.375.fna -queryname NZ_CDQQ010001841.375
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003931.376.fna -queryname NZ_CDQQ010003931.376
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003931.376.fna -queryname NZ_CDQQ010003931.376
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003931.376.fna -queryname NZ_CDQQ010003931.376
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002691.377.fna -queryname NZ_CDQQ010002691.377
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002691.377.fna -queryname NZ_CDQQ010002691.377
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002691.377.fna -queryname NZ_CDQQ010002691.377
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000221.378.fna -queryname NZ_CDQQ010000221.378
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000221.378.fna -queryname NZ_CDQQ010000221.378
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000221.378.fna -queryname NZ_CDQQ010000221.378
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000511.37.fna -queryname NZ_CDQQ010000511.37
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000511.37.fna -queryname NZ_CDQQ010000511.37
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000511.37.fna -queryname NZ_CDQQ010000511.37
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002321.379.fna -queryname NZ_CDQQ010002321.379
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002321.379.fna -queryname NZ_CDQQ010002321.379
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002321.379.fna -queryname NZ_CDQQ010002321.379
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008601.380.fna -queryname NZ_CDQQ010008601.380
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008601.380.fna -queryname NZ_CDQQ010008601.380
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008601.380.fna -queryname NZ_CDQQ010008601.380
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010010191.381.fna -queryname NZ_CDQQ010010191.381
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010010191.381.fna -queryname NZ_CDQQ010010191.381
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010010191.381.fna -queryname NZ_CDQQ010010191.381
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001821.382.fna -queryname NZ_CDQQ010001821.382
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001821.382.fna -queryname NZ_CDQQ010001821.382
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001821.382.fna -queryname NZ_CDQQ010001821.382
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000011.383.fna -queryname NZ_CDQQ010000011.383
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000011.383.fna -queryname NZ_CDQQ010000011.383
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000011.383.fna -queryname NZ_CDQQ010000011.383
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010010241.384.fna -queryname NZ_CDQQ010010241.384
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010010241.384.fna -queryname NZ_CDQQ010010241.384
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010010241.384.fna -queryname NZ_CDQQ010010241.384
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002001.385.fna -queryname NZ_CDQQ010002001.385
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002001.385.fna -queryname NZ_CDQQ010002001.385
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002001.385.fna -queryname NZ_CDQQ010002001.385
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005951.386.fna -queryname NZ_CDQQ010005951.386
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005951.386.fna -queryname NZ_CDQQ010005951.386
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005951.386.fna -queryname NZ_CDQQ010005951.386
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000491.387.fna -queryname NZ_CDQQ010000491.387
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000491.387.fna -queryname NZ_CDQQ010000491.387
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000491.387.fna -queryname NZ_CDQQ010000491.387
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000211.388.fna -queryname NZ_CDQQ010000211.388
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000211.388.fna -queryname NZ_CDQQ010000211.388
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000211.388.fna -queryname NZ_CDQQ010000211.388
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000311.38.fna -queryname NZ_CDQQ010000311.38
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000311.38.fna -queryname NZ_CDQQ010000311.38
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000311.38.fna -queryname NZ_CDQQ010000311.38
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000021.389.fna -queryname NZ_CDQQ010000021.389
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000021.389.fna -queryname NZ_CDQQ010000021.389
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000021.389.fna -queryname NZ_CDQQ010000021.389
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006551.390.fna -queryname NZ_CDQQ010006551.390
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006551.390.fna -queryname NZ_CDQQ010006551.390
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006551.390.fna -queryname NZ_CDQQ010006551.390
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004391.391.fna -queryname NZ_CDQQ010004391.391
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004391.391.fna -queryname NZ_CDQQ010004391.391
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004391.391.fna -queryname NZ_CDQQ010004391.391
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000181.392.fna -queryname NZ_CDQQ010000181.392
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000181.392.fna -queryname NZ_CDQQ010000181.392
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000181.392.fna -queryname NZ_CDQQ010000181.392
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000501.393.fna -queryname NZ_CDQQ010000501.393
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000501.393.fna -queryname NZ_CDQQ010000501.393
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000501.393.fna -queryname NZ_CDQQ010000501.393
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004241.394.fna -queryname NZ_CDQQ010004241.394
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004241.394.fna -queryname NZ_CDQQ010004241.394
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004241.394.fna -queryname NZ_CDQQ010004241.394
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007801.395.fna -queryname NZ_CDQQ010007801.395
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007801.395.fna -queryname NZ_CDQQ010007801.395
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007801.395.fna -queryname NZ_CDQQ010007801.395
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006391.396.fna -queryname NZ_CDQQ010006391.396
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006391.396.fna -queryname NZ_CDQQ010006391.396
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006391.396.fna -queryname NZ_CDQQ010006391.396
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008731.397.fna -queryname NZ_CDQQ010008731.397
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008731.397.fna -queryname NZ_CDQQ010008731.397
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008731.397.fna -queryname NZ_CDQQ010008731.397
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001581.398.fna -queryname NZ_CDQQ010001581.398
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001581.398.fna -queryname NZ_CDQQ010001581.398
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001581.398.fna -queryname NZ_CDQQ010001581.398
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_ABJL020000011.3.fna -queryname NZ_ABJL020000011.3
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_ABJL020000011.3.fna -queryname NZ_ABJL020000011.3
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_ABJL020000011.3.fna -queryname NZ_ABJL020000011.3
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001671.39.fna -queryname NZ_CDQQ010001671.39
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001671.39.fna -queryname NZ_CDQQ010001671.39
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001671.39.fna -queryname NZ_CDQQ010001671.39
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001291.399.fna -queryname NZ_CDQQ010001291.399
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001291.399.fna -queryname NZ_CDQQ010001291.399
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001291.399.fna -queryname NZ_CDQQ010001291.399
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000051.400.fna -queryname NZ_CDQQ010000051.400
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000051.400.fna -queryname NZ_CDQQ010000051.400
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000051.400.fna -queryname NZ_CDQQ010000051.400
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000441.401.fna -queryname NZ_CDQQ010000441.401
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000441.401.fna -queryname NZ_CDQQ010000441.401
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000441.401.fna -queryname NZ_CDQQ010000441.401
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002161.402.fna -queryname NZ_CDQQ010002161.402
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002161.402.fna -queryname NZ_CDQQ010002161.402
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002161.402.fna -queryname NZ_CDQQ010002161.402
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001991.403.fna -queryname NZ_CDQQ010001991.403
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001991.403.fna -queryname NZ_CDQQ010001991.403
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001991.403.fna -queryname NZ_CDQQ010001991.403
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004881.404.fna -queryname NZ_CDQQ010004881.404
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004881.404.fna -queryname NZ_CDQQ010004881.404
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004881.404.fna -queryname NZ_CDQQ010004881.404
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000411.405.fna -queryname NZ_CDQQ010000411.405
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000411.405.fna -queryname NZ_CDQQ010000411.405
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000411.405.fna -queryname NZ_CDQQ010000411.405
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010011701.406.fna -queryname NZ_CDQQ010011701.406
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010011701.406.fna -queryname NZ_CDQQ010011701.406
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010011701.406.fna -queryname NZ_CDQQ010011701.406
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003791.407.fna -queryname NZ_CDQQ010003791.407
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003791.407.fna -queryname NZ_CDQQ010003791.407
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003791.407.fna -queryname NZ_CDQQ010003791.407
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000271.408.fna -queryname NZ_CDQQ010000271.408
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000271.408.fna -queryname NZ_CDQQ010000271.408
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000271.408.fna -queryname NZ_CDQQ010000271.408
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000601.40.fna -queryname NZ_CDQQ010000601.40
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000601.40.fna -queryname NZ_CDQQ010000601.40
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000601.40.fna -queryname NZ_CDQQ010000601.40
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003991.409.fna -queryname NZ_CDQQ010003991.409
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003991.409.fna -queryname NZ_CDQQ010003991.409
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003991.409.fna -queryname NZ_CDQQ010003991.409
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009991.410.fna -queryname NZ_CDQQ010009991.410
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009991.410.fna -queryname NZ_CDQQ010009991.410
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009991.410.fna -queryname NZ_CDQQ010009991.410
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005091.411.fna -queryname NZ_CDQQ010005091.411
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005091.411.fna -queryname NZ_CDQQ010005091.411
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005091.411.fna -queryname NZ_CDQQ010005091.411
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005381.412.fna -queryname NZ_CDQQ010005381.412
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005381.412.fna -queryname NZ_CDQQ010005381.412
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005381.412.fna -queryname NZ_CDQQ010005381.412
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000041.413.fna -queryname NZ_CDQQ010000041.413
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000041.413.fna -queryname NZ_CDQQ010000041.413
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000041.413.fna -queryname NZ_CDQQ010000041.413
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004401.414.fna -queryname NZ_CDQQ010004401.414
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004401.414.fna -queryname NZ_CDQQ010004401.414
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004401.414.fna -queryname NZ_CDQQ010004401.414
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004661.415.fna -queryname NZ_CDQQ010004661.415
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004661.415.fna -queryname NZ_CDQQ010004661.415
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004661.415.fna -queryname NZ_CDQQ010004661.415
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006371.416.fna -queryname NZ_CDQQ010006371.416
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006371.416.fna -queryname NZ_CDQQ010006371.416
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006371.416.fna -queryname NZ_CDQQ010006371.416
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007771.417.fna -queryname NZ_CDQQ010007771.417
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007771.417.fna -queryname NZ_CDQQ010007771.417
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007771.417.fna -queryname NZ_CDQQ010007771.417
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007131.418.fna -queryname NZ_CDQQ010007131.418
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007131.418.fna -queryname NZ_CDQQ010007131.418
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007131.418.fna -queryname NZ_CDQQ010007131.418
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010010501.41.fna -queryname NZ_CDQQ010010501.41
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010010501.41.fna -queryname NZ_CDQQ010010501.41
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010010501.41.fna -queryname NZ_CDQQ010010501.41
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000301.419.fna -queryname NZ_CDQQ010000301.419
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000301.419.fna -queryname NZ_CDQQ010000301.419
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000301.419.fna -queryname NZ_CDQQ010000301.419
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004951.420.fna -queryname NZ_CDQQ010004951.420
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004951.420.fna -queryname NZ_CDQQ010004951.420
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004951.420.fna -queryname NZ_CDQQ010004951.420
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008111.421.fna -queryname NZ_CDQQ010008111.421
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008111.421.fna -queryname NZ_CDQQ010008111.421
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008111.421.fna -queryname NZ_CDQQ010008111.421
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001731.422.fna -queryname NZ_CDQQ010001731.422
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001731.422.fna -queryname NZ_CDQQ010001731.422
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001731.422.fna -queryname NZ_CDQQ010001731.422
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007171.423.fna -queryname NZ_CDQQ010007171.423
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007171.423.fna -queryname NZ_CDQQ010007171.423
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007171.423.fna -queryname NZ_CDQQ010007171.423
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006831.424.fna -queryname NZ_CDQQ010006831.424
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006831.424.fna -queryname NZ_CDQQ010006831.424
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006831.424.fna -queryname NZ_CDQQ010006831.424
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004351.425.fna -queryname NZ_CDQQ010004351.425
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004351.425.fna -queryname NZ_CDQQ010004351.425
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004351.425.fna -queryname NZ_CDQQ010004351.425
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003301.426.fna -queryname NZ_CDQQ010003301.426
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003301.426.fna -queryname NZ_CDQQ010003301.426
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003301.426.fna -queryname NZ_CDQQ010003301.426
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004581.427.fna -queryname NZ_CDQQ010004581.427
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004581.427.fna -queryname NZ_CDQQ010004581.427
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004581.427.fna -queryname NZ_CDQQ010004581.427
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004981.428.fna -queryname NZ_CDQQ010004981.428
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004981.428.fna -queryname NZ_CDQQ010004981.428
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004981.428.fna -queryname NZ_CDQQ010004981.428
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004311.42.fna -queryname NZ_CDQQ010004311.42
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004311.42.fna -queryname NZ_CDQQ010004311.42
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004311.42.fna -queryname NZ_CDQQ010004311.42
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006451.429.fna -queryname NZ_CDQQ010006451.429
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006451.429.fna -queryname NZ_CDQQ010006451.429
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006451.429.fna -queryname NZ_CDQQ010006451.429
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001771.430.fna -queryname NZ_CDQQ010001771.430
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001771.430.fna -queryname NZ_CDQQ010001771.430
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001771.430.fna -queryname NZ_CDQQ010001771.430
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006881.431.fna -queryname NZ_CDQQ010006881.431
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006881.431.fna -queryname NZ_CDQQ010006881.431
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006881.431.fna -queryname NZ_CDQQ010006881.431
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000451.432.fna -queryname NZ_CDQQ010000451.432
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000451.432.fna -queryname NZ_CDQQ010000451.432
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000451.432.fna -queryname NZ_CDQQ010000451.432
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003271.433.fna -queryname NZ_CDQQ010003271.433
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003271.433.fna -queryname NZ_CDQQ010003271.433
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003271.433.fna -queryname NZ_CDQQ010003271.433
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007761.434.fna -queryname NZ_CDQQ010007761.434
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007761.434.fna -queryname NZ_CDQQ010007761.434
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007761.434.fna -queryname NZ_CDQQ010007761.434
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000781.435.fna -queryname NZ_CDQQ010000781.435
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000781.435.fna -queryname NZ_CDQQ010000781.435
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000781.435.fna -queryname NZ_CDQQ010000781.435
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001011.436.fna -queryname NZ_CDQQ010001011.436
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001011.436.fna -queryname NZ_CDQQ010001011.436
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001011.436.fna -queryname NZ_CDQQ010001011.436
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000861.437.fna -queryname NZ_CDQQ010000861.437
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000861.437.fna -queryname NZ_CDQQ010000861.437
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000861.437.fna -queryname NZ_CDQQ010000861.437
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003581.438.fna -queryname NZ_CDQQ010003581.438
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003581.438.fna -queryname NZ_CDQQ010003581.438
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003581.438.fna -queryname NZ_CDQQ010003581.438
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009631.43.fna -queryname NZ_CDQQ010009631.43
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009631.43.fna -queryname NZ_CDQQ010009631.43
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009631.43.fna -queryname NZ_CDQQ010009631.43
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001361.439.fna -queryname NZ_CDQQ010001361.439
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001361.439.fna -queryname NZ_CDQQ010001361.439
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001361.439.fna -queryname NZ_CDQQ010001361.439
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006771.440.fna -queryname NZ_CDQQ010006771.440
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006771.440.fna -queryname NZ_CDQQ010006771.440
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006771.440.fna -queryname NZ_CDQQ010006771.440
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005851.441.fna -queryname NZ_CDQQ010005851.441
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005851.441.fna -queryname NZ_CDQQ010005851.441
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005851.441.fna -queryname NZ_CDQQ010005851.441
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010014051.442.fna -queryname NZ_CDQQ010014051.442
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010014051.442.fna -queryname NZ_CDQQ010014051.442
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010014051.442.fna -queryname NZ_CDQQ010014051.442
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002351.443.fna -queryname NZ_CDQQ010002351.443
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002351.443.fna -queryname NZ_CDQQ010002351.443
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002351.443.fna -queryname NZ_CDQQ010002351.443
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002571.444.fna -queryname NZ_CDQQ010002571.444
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002571.444.fna -queryname NZ_CDQQ010002571.444
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002571.444.fna -queryname NZ_CDQQ010002571.444
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006221.445.fna -queryname NZ_CDQQ010006221.445
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006221.445.fna -queryname NZ_CDQQ010006221.445
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006221.445.fna -queryname NZ_CDQQ010006221.445
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009661.446.fna -queryname NZ_CDQQ010009661.446
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009661.446.fna -queryname NZ_CDQQ010009661.446
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009661.446.fna -queryname NZ_CDQQ010009661.446
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002091.447.fna -queryname NZ_CDQQ010002091.447
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002091.447.fna -queryname NZ_CDQQ010002091.447
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002091.447.fna -queryname NZ_CDQQ010002091.447
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002231.448.fna -queryname NZ_CDQQ010002231.448
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002231.448.fna -queryname NZ_CDQQ010002231.448
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002231.448.fna -queryname NZ_CDQQ010002231.448
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000121.44.fna -queryname NZ_CDQQ010000121.44
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000121.44.fna -queryname NZ_CDQQ010000121.44
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000121.44.fna -queryname NZ_CDQQ010000121.44
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008971.449.fna -queryname NZ_CDQQ010008971.449
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008971.449.fna -queryname NZ_CDQQ010008971.449
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008971.449.fna -queryname NZ_CDQQ010008971.449
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000431.450.fna -queryname NZ_CDQQ010000431.450
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000431.450.fna -queryname NZ_CDQQ010000431.450
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000431.450.fna -queryname NZ_CDQQ010000431.450
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000761.451.fna -queryname NZ_CDQQ010000761.451
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000761.451.fna -queryname NZ_CDQQ010000761.451
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000761.451.fna -queryname NZ_CDQQ010000761.451
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003471.452.fna -queryname NZ_CDQQ010003471.452
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003471.452.fna -queryname NZ_CDQQ010003471.452
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003471.452.fna -queryname NZ_CDQQ010003471.452
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003461.453.fna -queryname NZ_CDQQ010003461.453
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003461.453.fna -queryname NZ_CDQQ010003461.453
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003461.453.fna -queryname NZ_CDQQ010003461.453
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003091.454.fna -queryname NZ_CDQQ010003091.454
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003091.454.fna -queryname NZ_CDQQ010003091.454
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003091.454.fna -queryname NZ_CDQQ010003091.454
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003571.455.fna -queryname NZ_CDQQ010003571.455
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003571.455.fna -queryname NZ_CDQQ010003571.455
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003571.455.fna -queryname NZ_CDQQ010003571.455
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000261.456.fna -queryname NZ_CDQQ010000261.456
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000261.456.fna -queryname NZ_CDQQ010000261.456
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000261.456.fna -queryname NZ_CDQQ010000261.456
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001511.457.fna -queryname NZ_CDQQ010001511.457
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001511.457.fna -queryname NZ_CDQQ010001511.457
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001511.457.fna -queryname NZ_CDQQ010001511.457
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001211.458.fna -queryname NZ_CDQQ010001211.458
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001211.458.fna -queryname NZ_CDQQ010001211.458
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001211.458.fna -queryname NZ_CDQQ010001211.458
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000521.45.fna -queryname NZ_CDQQ010000521.45
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000521.45.fna -queryname NZ_CDQQ010000521.45
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000521.45.fna -queryname NZ_CDQQ010000521.45
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002601.459.fna -queryname NZ_CDQQ010002601.459
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002601.459.fna -queryname NZ_CDQQ010002601.459
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002601.459.fna -queryname NZ_CDQQ010002601.459
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005151.460.fna -queryname NZ_CDQQ010005151.460
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005151.460.fna -queryname NZ_CDQQ010005151.460
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005151.460.fna -queryname NZ_CDQQ010005151.460
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002781.461.fna -queryname NZ_CDQQ010002781.461
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002781.461.fna -queryname NZ_CDQQ010002781.461
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002781.461.fna -queryname NZ_CDQQ010002781.461
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002901.462.fna -queryname NZ_CDQQ010002901.462
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002901.462.fna -queryname NZ_CDQQ010002901.462
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002901.462.fna -queryname NZ_CDQQ010002901.462
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005281.463.fna -queryname NZ_CDQQ010005281.463
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005281.463.fna -queryname NZ_CDQQ010005281.463
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005281.463.fna -queryname NZ_CDQQ010005281.463
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004821.464.fna -queryname NZ_CDQQ010004821.464
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004821.464.fna -queryname NZ_CDQQ010004821.464
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004821.464.fna -queryname NZ_CDQQ010004821.464
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001281.465.fna -queryname NZ_CDQQ010001281.465
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001281.465.fna -queryname NZ_CDQQ010001281.465
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001281.465.fna -queryname NZ_CDQQ010001281.465
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001151.466.fna -queryname NZ_CDQQ010001151.466
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001151.466.fna -queryname NZ_CDQQ010001151.466
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001151.466.fna -queryname NZ_CDQQ010001151.466
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003371.467.fna -queryname NZ_CDQQ010003371.467
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003371.467.fna -queryname NZ_CDQQ010003371.467
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003371.467.fna -queryname NZ_CDQQ010003371.467
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001471.468.fna -queryname NZ_CDQQ010001471.468
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001471.468.fna -queryname NZ_CDQQ010001471.468
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001471.468.fna -queryname NZ_CDQQ010001471.468
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003041.46.fna -queryname NZ_CDQQ010003041.46
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003041.46.fna -queryname NZ_CDQQ010003041.46
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003041.46.fna -queryname NZ_CDQQ010003041.46
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006381.469.fna -queryname NZ_CDQQ010006381.469
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006381.469.fna -queryname NZ_CDQQ010006381.469
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006381.469.fna -queryname NZ_CDQQ010006381.469
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002141.470.fna -queryname NZ_CDQQ010002141.470
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002141.470.fna -queryname NZ_CDQQ010002141.470
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002141.470.fna -queryname NZ_CDQQ010002141.470
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002201.471.fna -queryname NZ_CDQQ010002201.471
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002201.471.fna -queryname NZ_CDQQ010002201.471
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002201.471.fna -queryname NZ_CDQQ010002201.471
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002061.472.fna -queryname NZ_CDQQ010002061.472
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002061.472.fna -queryname NZ_CDQQ010002061.472
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002061.472.fna -queryname NZ_CDQQ010002061.472
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004941.473.fna -queryname NZ_CDQQ010004941.473
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004941.473.fna -queryname NZ_CDQQ010004941.473
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004941.473.fna -queryname NZ_CDQQ010004941.473
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006861.474.fna -queryname NZ_CDQQ010006861.474
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006861.474.fna -queryname NZ_CDQQ010006861.474
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006861.474.fna -queryname NZ_CDQQ010006861.474
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006421.475.fna -queryname NZ_CDQQ010006421.475
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006421.475.fna -queryname NZ_CDQQ010006421.475
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006421.475.fna -queryname NZ_CDQQ010006421.475
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000241.476.fna -queryname NZ_CDQQ010000241.476
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000241.476.fna -queryname NZ_CDQQ010000241.476
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000241.476.fna -queryname NZ_CDQQ010000241.476
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004501.477.fna -queryname NZ_CDQQ010004501.477
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004501.477.fna -queryname NZ_CDQQ010004501.477
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004501.477.fna -queryname NZ_CDQQ010004501.477
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004511.478.fna -queryname NZ_CDQQ010004511.478
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004511.478.fna -queryname NZ_CDQQ010004511.478
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004511.478.fna -queryname NZ_CDQQ010004511.478
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009131.47.fna -queryname NZ_CDQQ010009131.47
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009131.47.fna -queryname NZ_CDQQ010009131.47
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009131.47.fna -queryname NZ_CDQQ010009131.47
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007221.479.fna -queryname NZ_CDQQ010007221.479
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007221.479.fna -queryname NZ_CDQQ010007221.479
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007221.479.fna -queryname NZ_CDQQ010007221.479
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005351.480.fna -queryname NZ_CDQQ010005351.480
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005351.480.fna -queryname NZ_CDQQ010005351.480
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005351.480.fna -queryname NZ_CDQQ010005351.480
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002111.481.fna -queryname NZ_CDQQ010002111.481
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002111.481.fna -queryname NZ_CDQQ010002111.481
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002111.481.fna -queryname NZ_CDQQ010002111.481
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001031.482.fna -queryname NZ_CDQQ010001031.482
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001031.482.fna -queryname NZ_CDQQ010001031.482
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001031.482.fna -queryname NZ_CDQQ010001031.482
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005931.483.fna -queryname NZ_CDQQ010005931.483
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005931.483.fna -queryname NZ_CDQQ010005931.483
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005931.483.fna -queryname NZ_CDQQ010005931.483
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001961.484.fna -queryname NZ_CDQQ010001961.484
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001961.484.fna -queryname NZ_CDQQ010001961.484
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001961.484.fna -queryname NZ_CDQQ010001961.484
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003891.485.fna -queryname NZ_CDQQ010003891.485
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003891.485.fna -queryname NZ_CDQQ010003891.485
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003891.485.fna -queryname NZ_CDQQ010003891.485
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006161.486.fna -queryname NZ_CDQQ010006161.486
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006161.486.fna -queryname NZ_CDQQ010006161.486
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006161.486.fna -queryname NZ_CDQQ010006161.486
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008311.487.fna -queryname NZ_CDQQ010008311.487
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008311.487.fna -queryname NZ_CDQQ010008311.487
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008311.487.fna -queryname NZ_CDQQ010008311.487
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007611.488.fna -queryname NZ_CDQQ010007611.488
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007611.488.fna -queryname NZ_CDQQ010007611.488
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007611.488.fna -queryname NZ_CDQQ010007611.488
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007021.48.fna -queryname NZ_CDQQ010007021.48
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007021.48.fna -queryname NZ_CDQQ010007021.48
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007021.48.fna -queryname NZ_CDQQ010007021.48
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003821.489.fna -queryname NZ_CDQQ010003821.489
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003821.489.fna -queryname NZ_CDQQ010003821.489
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003821.489.fna -queryname NZ_CDQQ010003821.489
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006001.490.fna -queryname NZ_CDQQ010006001.490
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006001.490.fna -queryname NZ_CDQQ010006001.490
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006001.490.fna -queryname NZ_CDQQ010006001.490
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005021.491.fna -queryname NZ_CDQQ010005021.491
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005021.491.fna -queryname NZ_CDQQ010005021.491
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005021.491.fna -queryname NZ_CDQQ010005021.491
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000171.492.fna -queryname NZ_CDQQ010000171.492
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000171.492.fna -queryname NZ_CDQQ010000171.492
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000171.492.fna -queryname NZ_CDQQ010000171.492
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006411.493.fna -queryname NZ_CDQQ010006411.493
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006411.493.fna -queryname NZ_CDQQ010006411.493
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006411.493.fna -queryname NZ_CDQQ010006411.493
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007511.494.fna -queryname NZ_CDQQ010007511.494
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007511.494.fna -queryname NZ_CDQQ010007511.494
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007511.494.fna -queryname NZ_CDQQ010007511.494
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006671.495.fna -queryname NZ_CDQQ010006671.495
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006671.495.fna -queryname NZ_CDQQ010006671.495
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006671.495.fna -queryname NZ_CDQQ010006671.495
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003781.496.fna -queryname NZ_CDQQ010003781.496
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003781.496.fna -queryname NZ_CDQQ010003781.496
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003781.496.fna -queryname NZ_CDQQ010003781.496
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001501.497.fna -queryname NZ_CDQQ010001501.497
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001501.497.fna -queryname NZ_CDQQ010001501.497
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001501.497.fna -queryname NZ_CDQQ010001501.497
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000961.498.fna -queryname NZ_CDQQ010000961.498
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000961.498.fna -queryname NZ_CDQQ010000961.498
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000961.498.fna -queryname NZ_CDQQ010000961.498
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_ABJL020000071.4.fna -queryname NZ_ABJL020000071.4
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_ABJL020000071.4.fna -queryname NZ_ABJL020000071.4
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_ABJL020000071.4.fna -queryname NZ_ABJL020000071.4
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000361.49.fna -queryname NZ_CDQQ010000361.49
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000361.49.fna -queryname NZ_CDQQ010000361.49
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000361.49.fna -queryname NZ_CDQQ010000361.49
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002331.499.fna -queryname NZ_CDQQ010002331.499
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002331.499.fna -queryname NZ_CDQQ010002331.499
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002331.499.fna -queryname NZ_CDQQ010002331.499
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000621.500.fna -queryname NZ_CDQQ010000621.500
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000621.500.fna -queryname NZ_CDQQ010000621.500
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000621.500.fna -queryname NZ_CDQQ010000621.500
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006931.501.fna -queryname NZ_CDQQ010006931.501
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006931.501.fna -queryname NZ_CDQQ010006931.501
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006931.501.fna -queryname NZ_CDQQ010006931.501
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000151.502.fna -queryname NZ_CDQQ010000151.502
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000151.502.fna -queryname NZ_CDQQ010000151.502
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000151.502.fna -queryname NZ_CDQQ010000151.502
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003331.503.fna -queryname NZ_CDQQ010003331.503
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003331.503.fna -queryname NZ_CDQQ010003331.503
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003331.503.fna -queryname NZ_CDQQ010003331.503
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000771.504.fna -queryname NZ_CDQQ010000771.504
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000771.504.fna -queryname NZ_CDQQ010000771.504
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000771.504.fna -queryname NZ_CDQQ010000771.504
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005571.505.fna -queryname NZ_CDQQ010005571.505
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005571.505.fna -queryname NZ_CDQQ010005571.505
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005571.505.fna -queryname NZ_CDQQ010005571.505
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001331.506.fna -queryname NZ_CDQQ010001331.506
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001331.506.fna -queryname NZ_CDQQ010001331.506
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001331.506.fna -queryname NZ_CDQQ010001331.506
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000381.507.fna -queryname NZ_CDQQ010000381.507
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000381.507.fna -queryname NZ_CDQQ010000381.507
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000381.507.fna -queryname NZ_CDQQ010000381.507
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003921.508.fna -queryname NZ_CDQQ010003921.508
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003921.508.fna -queryname NZ_CDQQ010003921.508
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003921.508.fna -queryname NZ_CDQQ010003921.508
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000791.50.fna -queryname NZ_CDQQ010000791.50
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000791.50.fna -queryname NZ_CDQQ010000791.50
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000791.50.fna -queryname NZ_CDQQ010000791.50
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006791.509.fna -queryname NZ_CDQQ010006791.509
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006791.509.fna -queryname NZ_CDQQ010006791.509
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006791.509.fna -queryname NZ_CDQQ010006791.509
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002251.510.fna -queryname NZ_CDQQ010002251.510
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002251.510.fna -queryname NZ_CDQQ010002251.510
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002251.510.fna -queryname NZ_CDQQ010002251.510
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003401.511.fna -queryname NZ_CDQQ010003401.511
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003401.511.fna -queryname NZ_CDQQ010003401.511
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003401.511.fna -queryname NZ_CDQQ010003401.511
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003051.512.fna -queryname NZ_CDQQ010003051.512
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003051.512.fna -queryname NZ_CDQQ010003051.512
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003051.512.fna -queryname NZ_CDQQ010003051.512
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005171.513.fna -queryname NZ_CDQQ010005171.513
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005171.513.fna -queryname NZ_CDQQ010005171.513
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005171.513.fna -queryname NZ_CDQQ010005171.513
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007251.514.fna -queryname NZ_CDQQ010007251.514
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007251.514.fna -queryname NZ_CDQQ010007251.514
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007251.514.fna -queryname NZ_CDQQ010007251.514
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000871.515.fna -queryname NZ_CDQQ010000871.515
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000871.515.fna -queryname NZ_CDQQ010000871.515
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000871.515.fna -queryname NZ_CDQQ010000871.515
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000891.516.fna -queryname NZ_CDQQ010000891.516
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000891.516.fna -queryname NZ_CDQQ010000891.516
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000891.516.fna -queryname NZ_CDQQ010000891.516
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000071.517.fna -queryname NZ_CDQQ010000071.517
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000071.517.fna -queryname NZ_CDQQ010000071.517
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000071.517.fna -queryname NZ_CDQQ010000071.517
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001601.518.fna -queryname NZ_CDQQ010001601.518
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001601.518.fna -queryname NZ_CDQQ010001601.518
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001601.518.fna -queryname NZ_CDQQ010001601.518
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001551.51.fna -queryname NZ_CDQQ010001551.51
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001551.51.fna -queryname NZ_CDQQ010001551.51
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001551.51.fna -queryname NZ_CDQQ010001551.51
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001831.519.fna -queryname NZ_CDQQ010001831.519
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001831.519.fna -queryname NZ_CDQQ010001831.519
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001831.519.fna -queryname NZ_CDQQ010001831.519
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006241.520.fna -queryname NZ_CDQQ010006241.520
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006241.520.fna -queryname NZ_CDQQ010006241.520
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006241.520.fna -queryname NZ_CDQQ010006241.520
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001141.521.fna -queryname NZ_CDQQ010001141.521
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001141.521.fna -queryname NZ_CDQQ010001141.521
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001141.521.fna -queryname NZ_CDQQ010001141.521
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002311.522.fna -queryname NZ_CDQQ010002311.522
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002311.522.fna -queryname NZ_CDQQ010002311.522
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002311.522.fna -queryname NZ_CDQQ010002311.522
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010012391.523.fna -queryname NZ_CDQQ010012391.523
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010012391.523.fna -queryname NZ_CDQQ010012391.523
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010012391.523.fna -queryname NZ_CDQQ010012391.523
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004231.524.fna -queryname NZ_CDQQ010004231.524
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004231.524.fna -queryname NZ_CDQQ010004231.524
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004231.524.fna -queryname NZ_CDQQ010004231.524
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003881.525.fna -queryname NZ_CDQQ010003881.525
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003881.525.fna -queryname NZ_CDQQ010003881.525
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003881.525.fna -queryname NZ_CDQQ010003881.525
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001541.526.fna -queryname NZ_CDQQ010001541.526
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001541.526.fna -queryname NZ_CDQQ010001541.526
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001541.526.fna -queryname NZ_CDQQ010001541.526
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002371.527.fna -queryname NZ_CDQQ010002371.527
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002371.527.fna -queryname NZ_CDQQ010002371.527
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002371.527.fna -queryname NZ_CDQQ010002371.527
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001051.528.fna -queryname NZ_CDQQ010001051.528
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001051.528.fna -queryname NZ_CDQQ010001051.528
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001051.528.fna -queryname NZ_CDQQ010001051.528
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002711.52.fna -queryname NZ_CDQQ010002711.52
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002711.52.fna -queryname NZ_CDQQ010002711.52
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002711.52.fna -queryname NZ_CDQQ010002711.52
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003061.529.fna -queryname NZ_CDQQ010003061.529
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003061.529.fna -queryname NZ_CDQQ010003061.529
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003061.529.fna -queryname NZ_CDQQ010003061.529
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001621.530.fna -queryname NZ_CDQQ010001621.530
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001621.530.fna -queryname NZ_CDQQ010001621.530
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001621.530.fna -queryname NZ_CDQQ010001621.530
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003841.531.fna -queryname NZ_CDQQ010003841.531
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003841.531.fna -queryname NZ_CDQQ010003841.531
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003841.531.fna -queryname NZ_CDQQ010003841.531
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005341.532.fna -queryname NZ_CDQQ010005341.532
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005341.532.fna -queryname NZ_CDQQ010005341.532
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005341.532.fna -queryname NZ_CDQQ010005341.532
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003081.533.fna -queryname NZ_CDQQ010003081.533
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003081.533.fna -queryname NZ_CDQQ010003081.533
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003081.533.fna -queryname NZ_CDQQ010003081.533
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000661.534.fna -queryname NZ_CDQQ010000661.534
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000661.534.fna -queryname NZ_CDQQ010000661.534
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000661.534.fna -queryname NZ_CDQQ010000661.534
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004481.535.fna -queryname NZ_CDQQ010004481.535
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004481.535.fna -queryname NZ_CDQQ010004481.535
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004481.535.fna -queryname NZ_CDQQ010004481.535
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002821.536.fna -queryname NZ_CDQQ010002821.536
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002821.536.fna -queryname NZ_CDQQ010002821.536
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002821.536.fna -queryname NZ_CDQQ010002821.536
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000321.537.fna -queryname NZ_CDQQ010000321.537
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000321.537.fna -queryname NZ_CDQQ010000321.537
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000321.537.fna -queryname NZ_CDQQ010000321.537
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007931.538.fna -queryname NZ_CDQQ010007931.538
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007931.538.fna -queryname NZ_CDQQ010007931.538
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007931.538.fna -queryname NZ_CDQQ010007931.538
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004211.53.fna -queryname NZ_CDQQ010004211.53
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004211.53.fna -queryname NZ_CDQQ010004211.53
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004211.53.fna -queryname NZ_CDQQ010004211.53
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006181.539.fna -queryname NZ_CDQQ010006181.539
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006181.539.fna -queryname NZ_CDQQ010006181.539
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006181.539.fna -queryname NZ_CDQQ010006181.539
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008051.540.fna -queryname NZ_CDQQ010008051.540
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008051.540.fna -queryname NZ_CDQQ010008051.540
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008051.540.fna -queryname NZ_CDQQ010008051.540
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005641.541.fna -queryname NZ_CDQQ010005641.541
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005641.541.fna -queryname NZ_CDQQ010005641.541
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005641.541.fna -queryname NZ_CDQQ010005641.541
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007531.542.fna -queryname NZ_CDQQ010007531.542
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007531.542.fna -queryname NZ_CDQQ010007531.542
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007531.542.fna -queryname NZ_CDQQ010007531.542
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001591.543.fna -queryname NZ_CDQQ010001591.543
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001591.543.fna -queryname NZ_CDQQ010001591.543
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001591.543.fna -queryname NZ_CDQQ010001591.543
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006131.544.fna -queryname NZ_CDQQ010006131.544
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006131.544.fna -queryname NZ_CDQQ010006131.544
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006131.544.fna -queryname NZ_CDQQ010006131.544
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002861.545.fna -queryname NZ_CDQQ010002861.545
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002861.545.fna -queryname NZ_CDQQ010002861.545
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002861.545.fna -queryname NZ_CDQQ010002861.545
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001131.546.fna -queryname NZ_CDQQ010001131.546
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001131.546.fna -queryname NZ_CDQQ010001131.546
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001131.546.fna -queryname NZ_CDQQ010001131.546
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007981.547.fna -queryname NZ_CDQQ010007981.547
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007981.547.fna -queryname NZ_CDQQ010007981.547
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007981.547.fna -queryname NZ_CDQQ010007981.547
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000881.548.fna -queryname NZ_CDQQ010000881.548
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000881.548.fna -queryname NZ_CDQQ010000881.548
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000881.548.fna -queryname NZ_CDQQ010000881.548
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002651.54.fna -queryname NZ_CDQQ010002651.54
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002651.54.fna -queryname NZ_CDQQ010002651.54
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002651.54.fna -queryname NZ_CDQQ010002651.54
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004191.549.fna -queryname NZ_CDQQ010004191.549
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004191.549.fna -queryname NZ_CDQQ010004191.549
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004191.549.fna -queryname NZ_CDQQ010004191.549
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001651.550.fna -queryname NZ_CDQQ010001651.550
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001651.550.fna -queryname NZ_CDQQ010001651.550
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001651.550.fna -queryname NZ_CDQQ010001651.550
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003291.551.fna -queryname NZ_CDQQ010003291.551
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003291.551.fna -queryname NZ_CDQQ010003291.551
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003291.551.fna -queryname NZ_CDQQ010003291.551
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002391.552.fna -queryname NZ_CDQQ010002391.552
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002391.552.fna -queryname NZ_CDQQ010002391.552
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002391.552.fna -queryname NZ_CDQQ010002391.552
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005051.553.fna -queryname NZ_CDQQ010005051.553
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005051.553.fna -queryname NZ_CDQQ010005051.553
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005051.553.fna -queryname NZ_CDQQ010005051.553
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001041.554.fna -queryname NZ_CDQQ010001041.554
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001041.554.fna -queryname NZ_CDQQ010001041.554
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001041.554.fna -queryname NZ_CDQQ010001041.554
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001561.555.fna -queryname NZ_CDQQ010001561.555
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001561.555.fna -queryname NZ_CDQQ010001561.555
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001561.555.fna -queryname NZ_CDQQ010001561.555
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000901.556.fna -queryname NZ_CDQQ010000901.556
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000901.556.fna -queryname NZ_CDQQ010000901.556
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000901.556.fna -queryname NZ_CDQQ010000901.556
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004291.557.fna -queryname NZ_CDQQ010004291.557
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004291.557.fna -queryname NZ_CDQQ010004291.557
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004291.557.fna -queryname NZ_CDQQ010004291.557
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002931.558.fna -queryname NZ_CDQQ010002931.558
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002931.558.fna -queryname NZ_CDQQ010002931.558
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002931.558.fna -queryname NZ_CDQQ010002931.558
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001911.55.fna -queryname NZ_CDQQ010001911.55
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001911.55.fna -queryname NZ_CDQQ010001911.55
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001911.55.fna -queryname NZ_CDQQ010001911.55
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001911.55.AOI.fna -queryname NZ_CDQQ010001911.55
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001911.55.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001911.55.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -queryname NZ_CDQQ010001911.55
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -table NZ_CDQQ010001911.55.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006261.559.fna -queryname NZ_CDQQ010006261.559
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006261.559.fna -queryname NZ_CDQQ010006261.559
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006261.559.fna -queryname NZ_CDQQ010006261.559
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002281.560.fna -queryname NZ_CDQQ010002281.560
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002281.560.fna -queryname NZ_CDQQ010002281.560
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002281.560.fna -queryname NZ_CDQQ010002281.560
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005441.561.fna -queryname NZ_CDQQ010005441.561
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005441.561.fna -queryname NZ_CDQQ010005441.561
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005441.561.fna -queryname NZ_CDQQ010005441.561
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000711.562.fna -queryname NZ_CDQQ010000711.562
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000711.562.fna -queryname NZ_CDQQ010000711.562
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000711.562.fna -queryname NZ_CDQQ010000711.562
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002961.563.fna -queryname NZ_CDQQ010002961.563
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002961.563.fna -queryname NZ_CDQQ010002961.563
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002961.563.fna -queryname NZ_CDQQ010002961.563
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005001.564.fna -queryname NZ_CDQQ010005001.564
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005001.564.fna -queryname NZ_CDQQ010005001.564
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005001.564.fna -queryname NZ_CDQQ010005001.564
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001741.565.fna -queryname NZ_CDQQ010001741.565
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001741.565.fna -queryname NZ_CDQQ010001741.565
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001741.565.fna -queryname NZ_CDQQ010001741.565
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003411.566.fna -queryname NZ_CDQQ010003411.566
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003411.566.fna -queryname NZ_CDQQ010003411.566
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003411.566.fna -queryname NZ_CDQQ010003411.566
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001181.567.fna -queryname NZ_CDQQ010001181.567
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001181.567.fna -queryname NZ_CDQQ010001181.567
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001181.567.fna -queryname NZ_CDQQ010001181.567
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005261.568.fna -queryname NZ_CDQQ010005261.568
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005261.568.fna -queryname NZ_CDQQ010005261.568
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005261.568.fna -queryname NZ_CDQQ010005261.568
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007151.56.fna -queryname NZ_CDQQ010007151.56
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007151.56.fna -queryname NZ_CDQQ010007151.56
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007151.56.fna -queryname NZ_CDQQ010007151.56
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002851.569.fna -queryname NZ_CDQQ010002851.569
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002851.569.fna -queryname NZ_CDQQ010002851.569
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002851.569.fna -queryname NZ_CDQQ010002851.569
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004861.570.fna -queryname NZ_CDQQ010004861.570
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004861.570.fna -queryname NZ_CDQQ010004861.570
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004861.570.fna -queryname NZ_CDQQ010004861.570
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000081.571.fna -queryname NZ_CDQQ010000081.571
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000081.571.fna -queryname NZ_CDQQ010000081.571
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000081.571.fna -queryname NZ_CDQQ010000081.571
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004131.572.fna -queryname NZ_CDQQ010004131.572
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004131.572.fna -queryname NZ_CDQQ010004131.572
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004131.572.fna -queryname NZ_CDQQ010004131.572
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007681.573.fna -queryname NZ_CDQQ010007681.573
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007681.573.fna -queryname NZ_CDQQ010007681.573
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007681.573.fna -queryname NZ_CDQQ010007681.573
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001421.574.fna -queryname NZ_CDQQ010001421.574
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001421.574.fna -queryname NZ_CDQQ010001421.574
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001421.574.fna -queryname NZ_CDQQ010001421.574
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006051.575.fna -queryname NZ_CDQQ010006051.575
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006051.575.fna -queryname NZ_CDQQ010006051.575
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006051.575.fna -queryname NZ_CDQQ010006051.575
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004301.576.fna -queryname NZ_CDQQ010004301.576
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004301.576.fna -queryname NZ_CDQQ010004301.576
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004301.576.fna -queryname NZ_CDQQ010004301.576
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004641.577.fna -queryname NZ_CDQQ010004641.577
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004641.577.fna -queryname NZ_CDQQ010004641.577
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004641.577.fna -queryname NZ_CDQQ010004641.577
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001721.578.fna -queryname NZ_CDQQ010001721.578
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001721.578.fna -queryname NZ_CDQQ010001721.578
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001721.578.fna -queryname NZ_CDQQ010001721.578
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003221.57.fna -queryname NZ_CDQQ010003221.57
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003221.57.fna -queryname NZ_CDQQ010003221.57
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003221.57.fna -queryname NZ_CDQQ010003221.57
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004151.579.fna -queryname NZ_CDQQ010004151.579
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004151.579.fna -queryname NZ_CDQQ010004151.579
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004151.579.fna -queryname NZ_CDQQ010004151.579
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001531.580.fna -queryname NZ_CDQQ010001531.580
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001531.580.fna -queryname NZ_CDQQ010001531.580
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001531.580.fna -queryname NZ_CDQQ010001531.580
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006211.581.fna -queryname NZ_CDQQ010006211.581
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006211.581.fna -queryname NZ_CDQQ010006211.581
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006211.581.fna -queryname NZ_CDQQ010006211.581
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000391.582.fna -queryname NZ_CDQQ010000391.582
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000391.582.fna -queryname NZ_CDQQ010000391.582
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000391.582.fna -queryname NZ_CDQQ010000391.582
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006031.583.fna -queryname NZ_CDQQ010006031.583
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006031.583.fna -queryname NZ_CDQQ010006031.583
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006031.583.fna -queryname NZ_CDQQ010006031.583
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000401.584.fna -queryname NZ_CDQQ010000401.584
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000401.584.fna -queryname NZ_CDQQ010000401.584
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000401.584.fna -queryname NZ_CDQQ010000401.584
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004551.585.fna -queryname NZ_CDQQ010004551.585
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004551.585.fna -queryname NZ_CDQQ010004551.585
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004551.585.fna -queryname NZ_CDQQ010004551.585
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005411.586.fna -queryname NZ_CDQQ010005411.586
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005411.586.fna -queryname NZ_CDQQ010005411.586
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005411.586.fna -queryname NZ_CDQQ010005411.586
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009401.587.fna -queryname NZ_CDQQ010009401.587
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009401.587.fna -queryname NZ_CDQQ010009401.587
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009401.587.fna -queryname NZ_CDQQ010009401.587
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001021.588.fna -queryname NZ_CDQQ010001021.588
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001021.588.fna -queryname NZ_CDQQ010001021.588
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001021.588.fna -queryname NZ_CDQQ010001021.588
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006661.58.fna -queryname NZ_CDQQ010006661.58
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006661.58.fna -queryname NZ_CDQQ010006661.58
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006661.58.fna -queryname NZ_CDQQ010006661.58
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000651.589.fna -queryname NZ_CDQQ010000651.589
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000651.589.fna -queryname NZ_CDQQ010000651.589
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000651.589.fna -queryname NZ_CDQQ010000651.589
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003591.590.fna -queryname NZ_CDQQ010003591.590
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003591.590.fna -queryname NZ_CDQQ010003591.590
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003591.590.fna -queryname NZ_CDQQ010003591.590
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006991.591.fna -queryname NZ_CDQQ010006991.591
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006991.591.fna -queryname NZ_CDQQ010006991.591
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006991.591.fna -queryname NZ_CDQQ010006991.591
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004121.592.fna -queryname NZ_CDQQ010004121.592
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004121.592.fna -queryname NZ_CDQQ010004121.592
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004121.592.fna -queryname NZ_CDQQ010004121.592
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002681.593.fna -queryname NZ_CDQQ010002681.593
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002681.593.fna -queryname NZ_CDQQ010002681.593
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002681.593.fna -queryname NZ_CDQQ010002681.593
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003071.594.fna -queryname NZ_CDQQ010003071.594
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003071.594.fna -queryname NZ_CDQQ010003071.594
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003071.594.fna -queryname NZ_CDQQ010003071.594
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006511.595.fna -queryname NZ_CDQQ010006511.595
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006511.595.fna -queryname NZ_CDQQ010006511.595
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006511.595.fna -queryname NZ_CDQQ010006511.595
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002041.596.fna -queryname NZ_CDQQ010002041.596
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002041.596.fna -queryname NZ_CDQQ010002041.596
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002041.596.fna -queryname NZ_CDQQ010002041.596
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002021.597.fna -queryname NZ_CDQQ010002021.597
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002021.597.fna -queryname NZ_CDQQ010002021.597
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002021.597.fna -queryname NZ_CDQQ010002021.597
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007541.598.fna -queryname NZ_CDQQ010007541.598
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007541.598.fna -queryname NZ_CDQQ010007541.598
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007541.598.fna -queryname NZ_CDQQ010007541.598
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_ABJL020000041.5.fna -queryname NZ_ABJL020000041.5
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_ABJL020000041.5.fna -queryname NZ_ABJL020000041.5
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_ABJL020000041.5.fna -queryname NZ_ABJL020000041.5
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007781.59.fna -queryname NZ_CDQQ010007781.59
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007781.59.fna -queryname NZ_CDQQ010007781.59
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007781.59.fna -queryname NZ_CDQQ010007781.59
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006621.599.fna -queryname NZ_CDQQ010006621.599
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006621.599.fna -queryname NZ_CDQQ010006621.599
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006621.599.fna -queryname NZ_CDQQ010006621.599
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006811.600.fna -queryname NZ_CDQQ010006811.600
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006811.600.fna -queryname NZ_CDQQ010006811.600
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006811.600.fna -queryname NZ_CDQQ010006811.600
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005791.601.fna -queryname NZ_CDQQ010005791.601
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005791.601.fna -queryname NZ_CDQQ010005791.601
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005791.601.fna -queryname NZ_CDQQ010005791.601
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004621.602.fna -queryname NZ_CDQQ010004621.602
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004621.602.fna -queryname NZ_CDQQ010004621.602
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004621.602.fna -queryname NZ_CDQQ010004621.602
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002611.603.fna -queryname NZ_CDQQ010002611.603
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002611.603.fna -queryname NZ_CDQQ010002611.603
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002611.603.fna -queryname NZ_CDQQ010002611.603
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006601.604.fna -queryname NZ_CDQQ010006601.604
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006601.604.fna -queryname NZ_CDQQ010006601.604
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006601.604.fna -queryname NZ_CDQQ010006601.604
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005231.605.fna -queryname NZ_CDQQ010005231.605
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005231.605.fna -queryname NZ_CDQQ010005231.605
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005231.605.fna -queryname NZ_CDQQ010005231.605
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005361.606.fna -queryname NZ_CDQQ010005361.606
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005361.606.fna -queryname NZ_CDQQ010005361.606
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005361.606.fna -queryname NZ_CDQQ010005361.606
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000281.607.fna -queryname NZ_CDQQ010000281.607
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000281.607.fna -queryname NZ_CDQQ010000281.607
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000281.607.fna -queryname NZ_CDQQ010000281.607
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002911.608.fna -queryname NZ_CDQQ010002911.608
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002911.608.fna -queryname NZ_CDQQ010002911.608
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002911.608.fna -queryname NZ_CDQQ010002911.608
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001931.60.fna -queryname NZ_CDQQ010001931.60
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001931.60.fna -queryname NZ_CDQQ010001931.60
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001931.60.fna -queryname NZ_CDQQ010001931.60
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001461.609.fna -queryname NZ_CDQQ010001461.609
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001461.609.fna -queryname NZ_CDQQ010001461.609
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001461.609.fna -queryname NZ_CDQQ010001461.609
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008701.610.fna -queryname NZ_CDQQ010008701.610
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008701.610.fna -queryname NZ_CDQQ010008701.610
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008701.610.fna -queryname NZ_CDQQ010008701.610
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006111.611.fna -queryname NZ_CDQQ010006111.611
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006111.611.fna -queryname NZ_CDQQ010006111.611
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006111.611.fna -queryname NZ_CDQQ010006111.611
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002031.612.fna -queryname NZ_CDQQ010002031.612
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002031.612.fna -queryname NZ_CDQQ010002031.612
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002031.612.fna -queryname NZ_CDQQ010002031.612
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004051.613.fna -queryname NZ_CDQQ010004051.613
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004051.613.fna -queryname NZ_CDQQ010004051.613
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004051.613.fna -queryname NZ_CDQQ010004051.613
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002951.614.fna -queryname NZ_CDQQ010002951.614
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002951.614.fna -queryname NZ_CDQQ010002951.614
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002951.614.fna -queryname NZ_CDQQ010002951.614
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005521.615.fna -queryname NZ_CDQQ010005521.615
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005521.615.fna -queryname NZ_CDQQ010005521.615
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005521.615.fna -queryname NZ_CDQQ010005521.615
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005321.616.fna -queryname NZ_CDQQ010005321.616
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005321.616.fna -queryname NZ_CDQQ010005321.616
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005321.616.fna -queryname NZ_CDQQ010005321.616
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004691.617.fna -queryname NZ_CDQQ010004691.617
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004691.617.fna -queryname NZ_CDQQ010004691.617
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004691.617.fna -queryname NZ_CDQQ010004691.617
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002741.618.fna -queryname NZ_CDQQ010002741.618
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002741.618.fna -queryname NZ_CDQQ010002741.618
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002741.618.fna -queryname NZ_CDQQ010002741.618
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002261.61.fna -queryname NZ_CDQQ010002261.61
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002261.61.fna -queryname NZ_CDQQ010002261.61
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002261.61.fna -queryname NZ_CDQQ010002261.61
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002121.619.fna -queryname NZ_CDQQ010002121.619
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002121.619.fna -queryname NZ_CDQQ010002121.619
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002121.619.fna -queryname NZ_CDQQ010002121.619
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006521.620.fna -queryname NZ_CDQQ010006521.620
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006521.620.fna -queryname NZ_CDQQ010006521.620
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006521.620.fna -queryname NZ_CDQQ010006521.620
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007971.621.fna -queryname NZ_CDQQ010007971.621
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007971.621.fna -queryname NZ_CDQQ010007971.621
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007971.621.fna -queryname NZ_CDQQ010007971.621
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004141.622.fna -queryname NZ_CDQQ010004141.622
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004141.622.fna -queryname NZ_CDQQ010004141.622
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004141.622.fna -queryname NZ_CDQQ010004141.622
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001401.623.fna -queryname NZ_CDQQ010001401.623
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001401.623.fna -queryname NZ_CDQQ010001401.623
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001401.623.fna -queryname NZ_CDQQ010001401.623
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002411.624.fna -queryname NZ_CDQQ010002411.624
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002411.624.fna -queryname NZ_CDQQ010002411.624
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002411.624.fna -queryname NZ_CDQQ010002411.624
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007371.625.fna -queryname NZ_CDQQ010007371.625
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007371.625.fna -queryname NZ_CDQQ010007371.625
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007371.625.fna -queryname NZ_CDQQ010007371.625
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004781.626.fna -queryname NZ_CDQQ010004781.626
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004781.626.fna -queryname NZ_CDQQ010004781.626
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004781.626.fna -queryname NZ_CDQQ010004781.626
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001871.627.fna -queryname NZ_CDQQ010001871.627
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001871.627.fna -queryname NZ_CDQQ010001871.627
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001871.627.fna -queryname NZ_CDQQ010001871.627
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005211.628.fna -queryname NZ_CDQQ010005211.628
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005211.628.fna -queryname NZ_CDQQ010005211.628
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010005211.628.fna -queryname NZ_CDQQ010005211.628
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006171.62.fna -queryname NZ_CDQQ010006171.62
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006171.62.fna -queryname NZ_CDQQ010006171.62
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006171.62.fna -queryname NZ_CDQQ010006171.62
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010010121.629.fna -queryname NZ_CDQQ010010121.629
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010010121.629.fna -queryname NZ_CDQQ010010121.629
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010010121.629.fna -queryname NZ_CDQQ010010121.629
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006921.630.fna -queryname NZ_CDQQ010006921.630
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006921.630.fna -queryname NZ_CDQQ010006921.630
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006921.630.fna -queryname NZ_CDQQ010006921.630
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003391.631.fna -queryname NZ_CDQQ010003391.631
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003391.631.fna -queryname NZ_CDQQ010003391.631
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003391.631.fna -queryname NZ_CDQQ010003391.631
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000291.632.fna -queryname NZ_CDQQ010000291.632
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000291.632.fna -queryname NZ_CDQQ010000291.632
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000291.632.fna -queryname NZ_CDQQ010000291.632
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003131.633.fna -queryname NZ_CDQQ010003131.633
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003131.633.fna -queryname NZ_CDQQ010003131.633
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003131.633.fna -queryname NZ_CDQQ010003131.633
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004571.634.fna -queryname NZ_CDQQ010004571.634
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004571.634.fna -queryname NZ_CDQQ010004571.634
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004571.634.fna -queryname NZ_CDQQ010004571.634
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006401.635.fna -queryname NZ_CDQQ010006401.635
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006401.635.fna -queryname NZ_CDQQ010006401.635
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006401.635.fna -queryname NZ_CDQQ010006401.635
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003121.636.fna -queryname NZ_CDQQ010003121.636
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003121.636.fna -queryname NZ_CDQQ010003121.636
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003121.636.fna -queryname NZ_CDQQ010003121.636
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686841.637.fna -queryname NZ_KQ9686841.637
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686841.637.fna -queryname NZ_KQ9686841.637
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686841.637.fna -queryname NZ_KQ9686841.637
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686811.638.fna -queryname NZ_KQ9686811.638
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686811.638.fna -queryname NZ_KQ9686811.638
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686811.638.fna -queryname NZ_KQ9686811.638
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001321.63.fna -queryname NZ_CDQQ010001321.63
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001321.63.fna -queryname NZ_CDQQ010001321.63
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001321.63.fna -queryname NZ_CDQQ010001321.63
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687271.639.fna -queryname NZ_KQ9687271.639
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687271.639.fna -queryname NZ_KQ9687271.639
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687271.639.fna -queryname NZ_KQ9687271.639
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686951.640.fna -queryname NZ_KQ9686951.640
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686951.640.fna -queryname NZ_KQ9686951.640
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686951.640.fna -queryname NZ_KQ9686951.640
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686601.641.fna -queryname NZ_KQ9686601.641
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686601.641.fna -queryname NZ_KQ9686601.641
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686601.641.fna -queryname NZ_KQ9686601.641
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686551.642.fna -queryname NZ_KQ9686551.642
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686551.642.fna -queryname NZ_KQ9686551.642
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686551.642.fna -queryname NZ_KQ9686551.642
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686911.643.fna -queryname NZ_KQ9686911.643
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686911.643.fna -queryname NZ_KQ9686911.643
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686911.643.fna -queryname NZ_KQ9686911.643
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687341.644.fna -queryname NZ_KQ9687341.644
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687341.644.fna -queryname NZ_KQ9687341.644
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687341.644.fna -queryname NZ_KQ9687341.644
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687251.645.fna -queryname NZ_KQ9687251.645
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687251.645.fna -queryname NZ_KQ9687251.645
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687251.645.fna -queryname NZ_KQ9687251.645
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687151.646.fna -queryname NZ_KQ9687151.646
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687151.646.fna -queryname NZ_KQ9687151.646
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687151.646.fna -queryname NZ_KQ9687151.646
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687361.647.fna -queryname NZ_KQ9687361.647
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687361.647.fna -queryname NZ_KQ9687361.647
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687361.647.fna -queryname NZ_KQ9687361.647
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687291.648.fna -queryname NZ_KQ9687291.648
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687291.648.fna -queryname NZ_KQ9687291.648
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687291.648.fna -queryname NZ_KQ9687291.648
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004091.64.fna -queryname NZ_CDQQ010004091.64
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004091.64.fna -queryname NZ_CDQQ010004091.64
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004091.64.fna -queryname NZ_CDQQ010004091.64
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686981.649.fna -queryname NZ_KQ9686981.649
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686981.649.fna -queryname NZ_KQ9686981.649
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686981.649.fna -queryname NZ_KQ9686981.649
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686901.650.fna -queryname NZ_KQ9686901.650
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686901.650.fna -queryname NZ_KQ9686901.650
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686901.650.fna -queryname NZ_KQ9686901.650
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686451.651.fna -queryname NZ_KQ9686451.651
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686451.651.fna -queryname NZ_KQ9686451.651
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686451.651.fna -queryname NZ_KQ9686451.651
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687101.652.fna -queryname NZ_KQ9687101.652
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687101.652.fna -queryname NZ_KQ9687101.652
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687101.652.fna -queryname NZ_KQ9687101.652
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686861.653.fna -queryname NZ_KQ9686861.653
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686861.653.fna -queryname NZ_KQ9686861.653
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686861.653.fna -queryname NZ_KQ9686861.653
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686791.654.fna -queryname NZ_KQ9686791.654
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686791.654.fna -queryname NZ_KQ9686791.654
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686791.654.fna -queryname NZ_KQ9686791.654
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686641.655.fna -queryname NZ_KQ9686641.655
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686641.655.fna -queryname NZ_KQ9686641.655
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686641.655.fna -queryname NZ_KQ9686641.655
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687381.656.fna -queryname NZ_KQ9687381.656
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687381.656.fna -queryname NZ_KQ9687381.656
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687381.656.fna -queryname NZ_KQ9687381.656
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687011.657.fna -queryname NZ_KQ9687011.657
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687011.657.fna -queryname NZ_KQ9687011.657
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687011.657.fna -queryname NZ_KQ9687011.657
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687221.658.fna -queryname NZ_KQ9687221.658
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687221.658.fna -queryname NZ_KQ9687221.658
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687221.658.fna -queryname NZ_KQ9687221.658
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009721.65.fna -queryname NZ_CDQQ010009721.65
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009721.65.fna -queryname NZ_CDQQ010009721.65
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010009721.65.fna -queryname NZ_CDQQ010009721.65
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686421.659.fna -queryname NZ_KQ9686421.659
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686421.659.fna -queryname NZ_KQ9686421.659
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686421.659.fna -queryname NZ_KQ9686421.659
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686881.660.fna -queryname NZ_KQ9686881.660
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686881.660.fna -queryname NZ_KQ9686881.660
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686881.660.fna -queryname NZ_KQ9686881.660
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686751.661.fna -queryname NZ_KQ9686751.661
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686751.661.fna -queryname NZ_KQ9686751.661
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686751.661.fna -queryname NZ_KQ9686751.661
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687421.662.fna -queryname NZ_KQ9687421.662
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687421.662.fna -queryname NZ_KQ9687421.662
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687421.662.fna -queryname NZ_KQ9687421.662
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687131.663.fna -queryname NZ_KQ9687131.663
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687131.663.fna -queryname NZ_KQ9687131.663
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687131.663.fna -queryname NZ_KQ9687131.663
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686921.664.fna -queryname NZ_KQ9686921.664
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686921.664.fna -queryname NZ_KQ9686921.664
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686921.664.fna -queryname NZ_KQ9686921.664
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687391.665.fna -queryname NZ_KQ9687391.665
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687391.665.fna -queryname NZ_KQ9687391.665
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687391.665.fna -queryname NZ_KQ9687391.665
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686871.666.fna -queryname NZ_KQ9686871.666
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686871.666.fna -queryname NZ_KQ9686871.666
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686871.666.fna -queryname NZ_KQ9686871.666
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687321.667.fna -queryname NZ_KQ9687321.667
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687321.667.fna -queryname NZ_KQ9687321.667
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687321.667.fna -queryname NZ_KQ9687321.667
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686441.668.fna -queryname NZ_KQ9686441.668
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686441.668.fna -queryname NZ_KQ9686441.668
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686441.668.fna -queryname NZ_KQ9686441.668
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003761.66.fna -queryname NZ_CDQQ010003761.66
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003761.66.fna -queryname NZ_CDQQ010003761.66
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003761.66.fna -queryname NZ_CDQQ010003761.66
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687201.669.fna -queryname NZ_KQ9687201.669
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687201.669.fna -queryname NZ_KQ9687201.669
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687201.669.fna -queryname NZ_KQ9687201.669
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686491.670.fna -queryname NZ_KQ9686491.670
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686491.670.fna -queryname NZ_KQ9686491.670
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686491.670.fna -queryname NZ_KQ9686491.670
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686661.671.fna -queryname NZ_KQ9686661.671
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686661.671.fna -queryname NZ_KQ9686661.671
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686661.671.fna -queryname NZ_KQ9686661.671
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687411.672.fna -queryname NZ_KQ9687411.672
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687411.672.fna -queryname NZ_KQ9687411.672
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687411.672.fna -queryname NZ_KQ9687411.672
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686621.673.fna -queryname NZ_KQ9686621.673
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686621.673.fna -queryname NZ_KQ9686621.673
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686621.673.fna -queryname NZ_KQ9686621.673
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687331.674.fna -queryname NZ_KQ9687331.674
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687331.674.fna -queryname NZ_KQ9687331.674
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687331.674.fna -queryname NZ_KQ9687331.674
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686931.675.fna -queryname NZ_KQ9686931.675
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686931.675.fna -queryname NZ_KQ9686931.675
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686931.675.fna -queryname NZ_KQ9686931.675
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687241.676.fna -queryname NZ_KQ9687241.676
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687241.676.fna -queryname NZ_KQ9687241.676
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687241.676.fna -queryname NZ_KQ9687241.676
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686591.677.fna -queryname NZ_KQ9686591.677
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686591.677.fna -queryname NZ_KQ9686591.677
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686591.677.fna -queryname NZ_KQ9686591.677
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686961.678.fna -queryname NZ_KQ9686961.678
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686961.678.fna -queryname NZ_KQ9686961.678
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686961.678.fna -queryname NZ_KQ9686961.678
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001221.67.fna -queryname NZ_CDQQ010001221.67
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001221.67.fna -queryname NZ_CDQQ010001221.67
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001221.67.fna -queryname NZ_CDQQ010001221.67
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687431.679.fna -queryname NZ_KQ9687431.679
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687431.679.fna -queryname NZ_KQ9687431.679
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687431.679.fna -queryname NZ_KQ9687431.679
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687141.680.fna -queryname NZ_KQ9687141.680
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687141.680.fna -queryname NZ_KQ9687141.680
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687141.680.fna -queryname NZ_KQ9687141.680
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686781.681.fna -queryname NZ_KQ9686781.681
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686781.681.fna -queryname NZ_KQ9686781.681
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686781.681.fna -queryname NZ_KQ9686781.681
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686481.682.fna -queryname NZ_KQ9686481.682
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686481.682.fna -queryname NZ_KQ9686481.682
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686481.682.fna -queryname NZ_KQ9686481.682
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687091.683.fna -queryname NZ_KQ9687091.683
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687091.683.fna -queryname NZ_KQ9687091.683
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687091.683.fna -queryname NZ_KQ9687091.683
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687061.684.fna -queryname NZ_KQ9687061.684
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687061.684.fna -queryname NZ_KQ9687061.684
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687061.684.fna -queryname NZ_KQ9687061.684
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686581.685.fna -queryname NZ_KQ9686581.685
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686581.685.fna -queryname NZ_KQ9686581.685
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686581.685.fna -queryname NZ_KQ9686581.685
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687371.686.fna -queryname NZ_KQ9687371.686
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687371.686.fna -queryname NZ_KQ9687371.686
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687371.686.fna -queryname NZ_KQ9687371.686
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687371.686.AOI.fna -queryname NZ_KQ9687371.686
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687371.686.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9687371.686.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -queryname NZ_KQ9687371.686
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -table NZ_KQ9687371.686.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686941.687.fna -queryname NZ_KQ9686941.687
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686941.687.fna -queryname NZ_KQ9686941.687
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686941.687.fna -queryname NZ_KQ9686941.687
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686821.688.fna -queryname NZ_KQ9686821.688
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686821.688.fna -queryname NZ_KQ9686821.688
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686821.688.fna -queryname NZ_KQ9686821.688
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002291.68.fna -queryname NZ_CDQQ010002291.68
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002291.68.fna -queryname NZ_CDQQ010002291.68
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002291.68.fna -queryname NZ_CDQQ010002291.68
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686671.689.fna -queryname NZ_KQ9686671.689
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686671.689.fna -queryname NZ_KQ9686671.689
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686671.689.fna -queryname NZ_KQ9686671.689
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686711.690.fna -queryname NZ_KQ9686711.690
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686711.690.fna -queryname NZ_KQ9686711.690
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686711.690.fna -queryname NZ_KQ9686711.690
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686711.690.AOI.fna -queryname NZ_KQ9686711.690
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686711.690.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_KQ9686711.690.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -queryname NZ_KQ9686711.690
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -table NZ_KQ9686711.690.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CP0413791.691.fna -queryname NZ_CP0413791.691
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CP0413791.691.fna -queryname NZ_CP0413791.691
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CP0413791.691.fna -queryname NZ_CP0413791.691
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CP0413791.691.AOI.fna -queryname NZ_CP0413791.691
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CP0413791.691.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CP0413791.691.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -queryname NZ_CP0413791.691
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -table NZ_CP0413791.691.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000391.692.fna -queryname NZ_QSPF010000391.692
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000391.692.fna -queryname NZ_QSPF010000391.692
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000391.692.fna -queryname NZ_QSPF010000391.692
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000191.693.fna -queryname NZ_QSPF010000191.693
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000191.693.fna -queryname NZ_QSPF010000191.693
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000191.693.fna -queryname NZ_QSPF010000191.693
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000451.694.fna -queryname NZ_QSPF010000451.694
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000451.694.fna -queryname NZ_QSPF010000451.694
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000451.694.fna -queryname NZ_QSPF010000451.694
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000061.695.fna -queryname NZ_QSPF010000061.695
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000061.695.fna -queryname NZ_QSPF010000061.695
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000061.695.fna -queryname NZ_QSPF010000061.695
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000621.696.fna -queryname NZ_QSPF010000621.696
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000621.696.fna -queryname NZ_QSPF010000621.696
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000621.696.fna -queryname NZ_QSPF010000621.696
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000581.697.fna -queryname NZ_QSPF010000581.697
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000581.697.fna -queryname NZ_QSPF010000581.697
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000581.697.fna -queryname NZ_QSPF010000581.697
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000501.698.fna -queryname NZ_QSPF010000501.698
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000501.698.fna -queryname NZ_QSPF010000501.698
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000501.698.fna -queryname NZ_QSPF010000501.698
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_ABJL020000021.6.fna -queryname NZ_ABJL020000021.6
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_ABJL020000021.6.fna -queryname NZ_ABJL020000021.6
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_ABJL020000021.6.fna -queryname NZ_ABJL020000021.6
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002471.69.fna -queryname NZ_CDQQ010002471.69
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002471.69.fna -queryname NZ_CDQQ010002471.69
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002471.69.fna -queryname NZ_CDQQ010002471.69
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000251.699.fna -queryname NZ_QSPF010000251.699
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000251.699.fna -queryname NZ_QSPF010000251.699
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000251.699.fna -queryname NZ_QSPF010000251.699
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000521.700.fna -queryname NZ_QSPF010000521.700
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000521.700.fna -queryname NZ_QSPF010000521.700
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000521.700.fna -queryname NZ_QSPF010000521.700
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000461.701.fna -queryname NZ_QSPF010000461.701
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000461.701.fna -queryname NZ_QSPF010000461.701
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000461.701.fna -queryname NZ_QSPF010000461.701
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000031.702.fna -queryname NZ_QSPF010000031.702
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000031.702.fna -queryname NZ_QSPF010000031.702
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000031.702.fna -queryname NZ_QSPF010000031.702
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000381.703.fna -queryname NZ_QSPF010000381.703
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000381.703.fna -queryname NZ_QSPF010000381.703
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000381.703.fna -queryname NZ_QSPF010000381.703
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000341.704.fna -queryname NZ_QSPF010000341.704
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000341.704.fna -queryname NZ_QSPF010000341.704
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000341.704.fna -queryname NZ_QSPF010000341.704
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000201.705.fna -queryname NZ_QSPF010000201.705
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000201.705.fna -queryname NZ_QSPF010000201.705
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000201.705.fna -queryname NZ_QSPF010000201.705
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000651.706.fna -queryname NZ_QSPF010000651.706
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000651.706.fna -queryname NZ_QSPF010000651.706
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000651.706.fna -queryname NZ_QSPF010000651.706
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000081.707.fna -queryname NZ_QSPF010000081.707
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000081.707.fna -queryname NZ_QSPF010000081.707
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000081.707.fna -queryname NZ_QSPF010000081.707
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000071.708.fna -queryname NZ_QSPF010000071.708
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000071.708.fna -queryname NZ_QSPF010000071.708
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000071.708.fna -queryname NZ_QSPF010000071.708
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000071.708.AOI.fna -queryname NZ_QSPF010000071.708
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000071.708.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000071.708.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -queryname NZ_QSPF010000071.708
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -table NZ_QSPF010000071.708.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008791.70.fna -queryname NZ_CDQQ010008791.70
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008791.70.fna -queryname NZ_CDQQ010008791.70
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008791.70.fna -queryname NZ_CDQQ010008791.70
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000331.709.fna -queryname NZ_QSPF010000331.709
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000331.709.fna -queryname NZ_QSPF010000331.709
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000331.709.fna -queryname NZ_QSPF010000331.709
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000661.710.fna -queryname NZ_QSPF010000661.710
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000661.710.fna -queryname NZ_QSPF010000661.710
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000661.710.fna -queryname NZ_QSPF010000661.710
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000401.711.fna -queryname NZ_QSPF010000401.711
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000401.711.fna -queryname NZ_QSPF010000401.711
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000401.711.fna -queryname NZ_QSPF010000401.711
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000091.712.fna -queryname NZ_QSPF010000091.712
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000091.712.fna -queryname NZ_QSPF010000091.712
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000091.712.fna -queryname NZ_QSPF010000091.712
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000231.713.fna -queryname NZ_QSPF010000231.713
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000231.713.fna -queryname NZ_QSPF010000231.713
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000231.713.fna -queryname NZ_QSPF010000231.713
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000271.714.fna -queryname NZ_QSPF010000271.714
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000271.714.fna -queryname NZ_QSPF010000271.714
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000271.714.fna -queryname NZ_QSPF010000271.714
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000481.715.fna -queryname NZ_QSPF010000481.715
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000481.715.fna -queryname NZ_QSPF010000481.715
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000481.715.fna -queryname NZ_QSPF010000481.715
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000561.716.fna -queryname NZ_QSPF010000561.716
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000561.716.fna -queryname NZ_QSPF010000561.716
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000561.716.fna -queryname NZ_QSPF010000561.716
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000351.717.fna -queryname NZ_QSPF010000351.717
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000351.717.fna -queryname NZ_QSPF010000351.717
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000351.717.fna -queryname NZ_QSPF010000351.717
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000761.718.fna -queryname NZ_QSPF010000761.718
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000761.718.fna -queryname NZ_QSPF010000761.718
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000761.718.fna -queryname NZ_QSPF010000761.718
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001971.71.fna -queryname NZ_CDQQ010001971.71
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001971.71.fna -queryname NZ_CDQQ010001971.71
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001971.71.fna -queryname NZ_CDQQ010001971.71
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000311.719.fna -queryname NZ_QSPF010000311.719
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000311.719.fna -queryname NZ_QSPF010000311.719
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000311.719.fna -queryname NZ_QSPF010000311.719
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000211.720.fna -queryname NZ_QSPF010000211.720
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000211.720.fna -queryname NZ_QSPF010000211.720
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000211.720.fna -queryname NZ_QSPF010000211.720
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000631.721.fna -queryname NZ_QSPF010000631.721
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000631.721.fna -queryname NZ_QSPF010000631.721
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000631.721.fna -queryname NZ_QSPF010000631.721
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000471.722.fna -queryname NZ_QSPF010000471.722
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000471.722.fna -queryname NZ_QSPF010000471.722
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000471.722.fna -queryname NZ_QSPF010000471.722
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000021.723.fna -queryname NZ_QSPF010000021.723
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000021.723.fna -queryname NZ_QSPF010000021.723
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000021.723.fna -queryname NZ_QSPF010000021.723
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000261.724.fna -queryname NZ_QSPF010000261.724
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000261.724.fna -queryname NZ_QSPF010000261.724
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000261.724.fna -queryname NZ_QSPF010000261.724
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000261.724.AOI.fna -queryname NZ_QSPF010000261.724
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000261.724.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000261.724.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -queryname NZ_QSPF010000261.724
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -table NZ_QSPF010000261.724.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000771.725.fna -queryname NZ_QSPF010000771.725
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000771.725.fna -queryname NZ_QSPF010000771.725
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000771.725.fna -queryname NZ_QSPF010000771.725
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000371.726.fna -queryname NZ_QSPF010000371.726
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000371.726.fna -queryname NZ_QSPF010000371.726
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000371.726.fna -queryname NZ_QSPF010000371.726
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000041.727.fna -queryname NZ_QSPF010000041.727
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000041.727.fna -queryname NZ_QSPF010000041.727
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000041.727.fna -queryname NZ_QSPF010000041.727
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000241.728.fna -queryname NZ_QSPF010000241.728
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000241.728.fna -queryname NZ_QSPF010000241.728
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000241.728.fna -queryname NZ_QSPF010000241.728
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007661.72.fna -queryname NZ_CDQQ010007661.72
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007661.72.fna -queryname NZ_CDQQ010007661.72
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007661.72.fna -queryname NZ_CDQQ010007661.72
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000361.729.fna -queryname NZ_QSPF010000361.729
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000361.729.fna -queryname NZ_QSPF010000361.729
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000361.729.fna -queryname NZ_QSPF010000361.729
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000751.730.fna -queryname NZ_QSPF010000751.730
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000751.730.fna -queryname NZ_QSPF010000751.730
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000751.730.fna -queryname NZ_QSPF010000751.730
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000431.731.fna -queryname NZ_QSPF010000431.731
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000431.731.fna -queryname NZ_QSPF010000431.731
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000431.731.fna -queryname NZ_QSPF010000431.731
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000171.732.fna -queryname NZ_QSPF010000171.732
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000171.732.fna -queryname NZ_QSPF010000171.732
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000171.732.fna -queryname NZ_QSPF010000171.732
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000221.733.fna -queryname NZ_QSPF010000221.733
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000221.733.fna -queryname NZ_QSPF010000221.733
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000221.733.fna -queryname NZ_QSPF010000221.733
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000611.734.fna -queryname NZ_QSPF010000611.734
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000611.734.fna -queryname NZ_QSPF010000611.734
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000611.734.fna -queryname NZ_QSPF010000611.734
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000511.735.fna -queryname NZ_QSPF010000511.735
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000511.735.fna -queryname NZ_QSPF010000511.735
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000511.735.fna -queryname NZ_QSPF010000511.735
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000721.736.fna -queryname NZ_QSPF010000721.736
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000721.736.fna -queryname NZ_QSPF010000721.736
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000721.736.fna -queryname NZ_QSPF010000721.736
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000791.737.fna -queryname NZ_QSPF010000791.737
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000791.737.fna -queryname NZ_QSPF010000791.737
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000791.737.fna -queryname NZ_QSPF010000791.737
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000711.738.fna -queryname NZ_QSPF010000711.738
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000711.738.fna -queryname NZ_QSPF010000711.738
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000711.738.fna -queryname NZ_QSPF010000711.738
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006251.73.fna -queryname NZ_CDQQ010006251.73
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006251.73.fna -queryname NZ_CDQQ010006251.73
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006251.73.fna -queryname NZ_CDQQ010006251.73
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000111.739.fna -queryname NZ_QSPF010000111.739
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000111.739.fna -queryname NZ_QSPF010000111.739
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000111.739.fna -queryname NZ_QSPF010000111.739
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000731.740.fna -queryname NZ_QSPF010000731.740
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000731.740.fna -queryname NZ_QSPF010000731.740
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000731.740.fna -queryname NZ_QSPF010000731.740
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000141.741.fna -queryname NZ_QSPF010000141.741
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000141.741.fna -queryname NZ_QSPF010000141.741
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000141.741.fna -queryname NZ_QSPF010000141.741
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000321.742.fna -queryname NZ_QSPF010000321.742
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000321.742.fna -queryname NZ_QSPF010000321.742
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000321.742.fna -queryname NZ_QSPF010000321.742
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000131.743.fna -queryname NZ_QSPF010000131.743
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000131.743.fna -queryname NZ_QSPF010000131.743
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000131.743.fna -queryname NZ_QSPF010000131.743
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000671.744.fna -queryname NZ_QSPF010000671.744
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000671.744.fna -queryname NZ_QSPF010000671.744
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000671.744.fna -queryname NZ_QSPF010000671.744
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000411.745.fna -queryname NZ_QSPF010000411.745
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000411.745.fna -queryname NZ_QSPF010000411.745
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000411.745.fna -queryname NZ_QSPF010000411.745
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000491.746.fna -queryname NZ_QSPF010000491.746
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000491.746.fna -queryname NZ_QSPF010000491.746
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000491.746.fna -queryname NZ_QSPF010000491.746
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000291.747.fna -queryname NZ_QSPF010000291.747
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000291.747.fna -queryname NZ_QSPF010000291.747
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000291.747.fna -queryname NZ_QSPF010000291.747
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000421.748.fna -queryname NZ_QSPF010000421.748
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000421.748.fna -queryname NZ_QSPF010000421.748
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000421.748.fna -queryname NZ_QSPF010000421.748
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006711.74.fna -queryname NZ_CDQQ010006711.74
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006711.74.fna -queryname NZ_CDQQ010006711.74
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006711.74.fna -queryname NZ_CDQQ010006711.74
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000641.749.fna -queryname NZ_QSPF010000641.749
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000641.749.fna -queryname NZ_QSPF010000641.749
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000641.749.fna -queryname NZ_QSPF010000641.749
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000781.750.fna -queryname NZ_QSPF010000781.750
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000781.750.fna -queryname NZ_QSPF010000781.750
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000781.750.fna -queryname NZ_QSPF010000781.750
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000181.751.fna -queryname NZ_QSPF010000181.751
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000181.751.fna -queryname NZ_QSPF010000181.751
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000181.751.fna -queryname NZ_QSPF010000181.751
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000541.752.fna -queryname NZ_QSPF010000541.752
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000541.752.fna -queryname NZ_QSPF010000541.752
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000541.752.fna -queryname NZ_QSPF010000541.752
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000551.753.fna -queryname NZ_QSPF010000551.753
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000551.753.fna -queryname NZ_QSPF010000551.753
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000551.753.fna -queryname NZ_QSPF010000551.753
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000681.754.fna -queryname NZ_QSPF010000681.754
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000681.754.fna -queryname NZ_QSPF010000681.754
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000681.754.fna -queryname NZ_QSPF010000681.754
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000101.755.fna -queryname NZ_QSPF010000101.755
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000101.755.fna -queryname NZ_QSPF010000101.755
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000101.755.fna -queryname NZ_QSPF010000101.755
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000701.756.fna -queryname NZ_QSPF010000701.756
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000701.756.fna -queryname NZ_QSPF010000701.756
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000701.756.fna -queryname NZ_QSPF010000701.756
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000691.757.fna -queryname NZ_QSPF010000691.757
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000691.757.fna -queryname NZ_QSPF010000691.757
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000691.757.fna -queryname NZ_QSPF010000691.757
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000151.758.fna -queryname NZ_QSPF010000151.758
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000151.758.fna -queryname NZ_QSPF010000151.758
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000151.758.fna -queryname NZ_QSPF010000151.758
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000141.75.fna -queryname NZ_CDQQ010000141.75
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000141.75.fna -queryname NZ_CDQQ010000141.75
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000141.75.fna -queryname NZ_CDQQ010000141.75
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000011.759.fna -queryname NZ_QSPF010000011.759
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000011.759.fna -queryname NZ_QSPF010000011.759
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000011.759.fna -queryname NZ_QSPF010000011.759
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000601.760.fna -queryname NZ_QSPF010000601.760
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000601.760.fna -queryname NZ_QSPF010000601.760
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000601.760.fna -queryname NZ_QSPF010000601.760
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000801.761.fna -queryname NZ_QSPF010000801.761
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000801.761.fna -queryname NZ_QSPF010000801.761
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000801.761.fna -queryname NZ_QSPF010000801.761
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000531.762.fna -queryname NZ_QSPF010000531.762
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000531.762.fna -queryname NZ_QSPF010000531.762
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000531.762.fna -queryname NZ_QSPF010000531.762
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000051.763.fna -queryname NZ_QSPF010000051.763
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000051.763.fna -queryname NZ_QSPF010000051.763
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000051.763.fna -queryname NZ_QSPF010000051.763
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000301.764.fna -queryname NZ_QSPF010000301.764
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000301.764.fna -queryname NZ_QSPF010000301.764
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000301.764.fna -queryname NZ_QSPF010000301.764
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000441.765.fna -queryname NZ_QSPF010000441.765
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000441.765.fna -queryname NZ_QSPF010000441.765
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000441.765.fna -queryname NZ_QSPF010000441.765
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000591.766.fna -queryname NZ_QSPF010000591.766
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000591.766.fna -queryname NZ_QSPF010000591.766
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000591.766.fna -queryname NZ_QSPF010000591.766
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000281.767.fna -queryname NZ_QSPF010000281.767
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000281.767.fna -queryname NZ_QSPF010000281.767
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000281.767.fna -queryname NZ_QSPF010000281.767
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000741.768.fna -queryname NZ_QSPF010000741.768
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000741.768.fna -queryname NZ_QSPF010000741.768
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000741.768.fna -queryname NZ_QSPF010000741.768
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003441.76.fna -queryname NZ_CDQQ010003441.76
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003441.76.fna -queryname NZ_CDQQ010003441.76
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003441.76.fna -queryname NZ_CDQQ010003441.76
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000571.769.fna -queryname NZ_QSPF010000571.769
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000571.769.fna -queryname NZ_QSPF010000571.769
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000571.769.fna -queryname NZ_QSPF010000571.769
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000161.770.fna -queryname NZ_QSPF010000161.770
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000161.770.fna -queryname NZ_QSPF010000161.770
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000161.770.fna -queryname NZ_QSPF010000161.770
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000121.771.fna -queryname NZ_QSPF010000121.771
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000121.771.fna -queryname NZ_QSPF010000121.771
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSPF010000121.771.fna -queryname NZ_QSPF010000121.771
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000111.772.fna -queryname NZ_QSQI010000111.772
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000111.772.fna -queryname NZ_QSQI010000111.772
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000111.772.fna -queryname NZ_QSQI010000111.772
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000141.773.fna -queryname NZ_QSQI010000141.773
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000141.773.fna -queryname NZ_QSQI010000141.773
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000141.773.fna -queryname NZ_QSQI010000141.773
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000021.774.fna -queryname NZ_QSQI010000021.774
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000021.774.fna -queryname NZ_QSQI010000021.774
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000021.774.fna -queryname NZ_QSQI010000021.774
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000291.775.fna -queryname NZ_QSQI010000291.775
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000291.775.fna -queryname NZ_QSQI010000291.775
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000291.775.fna -queryname NZ_QSQI010000291.775
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000101.776.fna -queryname NZ_QSQI010000101.776
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000101.776.fna -queryname NZ_QSQI010000101.776
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000101.776.fna -queryname NZ_QSQI010000101.776
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000041.777.fna -queryname NZ_QSQI010000041.777
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000041.777.fna -queryname NZ_QSQI010000041.777
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000041.777.fna -queryname NZ_QSQI010000041.777
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000011.778.fna -queryname NZ_QSQI010000011.778
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000011.778.fna -queryname NZ_QSQI010000011.778
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000011.778.fna -queryname NZ_QSQI010000011.778
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001081.77.fna -queryname NZ_CDQQ010001081.77
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001081.77.fna -queryname NZ_CDQQ010001081.77
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010001081.77.fna -queryname NZ_CDQQ010001081.77
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000221.779.fna -queryname NZ_QSQI010000221.779
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000221.779.fna -queryname NZ_QSQI010000221.779
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000221.779.fna -queryname NZ_QSQI010000221.779
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000191.780.fna -queryname NZ_QSQI010000191.780
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000191.780.fna -queryname NZ_QSQI010000191.780
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000191.780.fna -queryname NZ_QSQI010000191.780
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000191.780.AOI.fna -queryname NZ_QSQI010000191.780
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000191.780.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000191.780.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -queryname NZ_QSQI010000191.780
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -table NZ_QSQI010000191.780.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000171.781.fna -queryname NZ_QSQI010000171.781
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000171.781.fna -queryname NZ_QSQI010000171.781
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000171.781.fna -queryname NZ_QSQI010000171.781
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000201.782.fna -queryname NZ_QSQI010000201.782
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000201.782.fna -queryname NZ_QSQI010000201.782
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000201.782.fna -queryname NZ_QSQI010000201.782
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000281.783.fna -queryname NZ_QSQI010000281.783
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000281.783.fna -queryname NZ_QSQI010000281.783
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000281.783.fna -queryname NZ_QSQI010000281.783
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000061.784.fna -queryname NZ_QSQI010000061.784
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000061.784.fna -queryname NZ_QSQI010000061.784
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000061.784.fna -queryname NZ_QSQI010000061.784
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000061.784.AOI.fna -queryname NZ_QSQI010000061.784
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000061.784.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000061.784.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -queryname NZ_QSQI010000061.784
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -table NZ_QSQI010000061.784.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000331.785.fna -queryname NZ_QSQI010000331.785
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000331.785.fna -queryname NZ_QSQI010000331.785
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000331.785.fna -queryname NZ_QSQI010000331.785
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000031.786.fna -queryname NZ_QSQI010000031.786
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000031.786.fna -queryname NZ_QSQI010000031.786
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000031.786.fna -queryname NZ_QSQI010000031.786
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000271.787.fna -queryname NZ_QSQI010000271.787
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000271.787.fna -queryname NZ_QSQI010000271.787
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000271.787.fna -queryname NZ_QSQI010000271.787
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000051.788.fna -queryname NZ_QSQI010000051.788
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000051.788.fna -queryname NZ_QSQI010000051.788
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000051.788.fna -queryname NZ_QSQI010000051.788
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003351.78.fna -queryname NZ_CDQQ010003351.78
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003351.78.fna -queryname NZ_CDQQ010003351.78
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003351.78.fna -queryname NZ_CDQQ010003351.78
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000081.789.fna -queryname NZ_QSQI010000081.789
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000081.789.fna -queryname NZ_QSQI010000081.789
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000081.789.fna -queryname NZ_QSQI010000081.789
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000131.790.fna -queryname NZ_QSQI010000131.790
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000131.790.fna -queryname NZ_QSQI010000131.790
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000131.790.fna -queryname NZ_QSQI010000131.790
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000181.791.fna -queryname NZ_QSQI010000181.791
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000181.791.fna -queryname NZ_QSQI010000181.791
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000181.791.fna -queryname NZ_QSQI010000181.791
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000241.792.fna -queryname NZ_QSQI010000241.792
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000241.792.fna -queryname NZ_QSQI010000241.792
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000241.792.fna -queryname NZ_QSQI010000241.792
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000321.793.fna -queryname NZ_QSQI010000321.793
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000321.793.fna -queryname NZ_QSQI010000321.793
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000321.793.fna -queryname NZ_QSQI010000321.793
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000351.794.fna -queryname NZ_QSQI010000351.794
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000351.794.fna -queryname NZ_QSQI010000351.794
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000351.794.fna -queryname NZ_QSQI010000351.794
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000161.795.fna -queryname NZ_QSQI010000161.795
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000161.795.fna -queryname NZ_QSQI010000161.795
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000161.795.fna -queryname NZ_QSQI010000161.795
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000121.796.fna -queryname NZ_QSQI010000121.796
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000121.796.fna -queryname NZ_QSQI010000121.796
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000121.796.fna -queryname NZ_QSQI010000121.796
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000071.797.fna -queryname NZ_QSQI010000071.797
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000071.797.fna -queryname NZ_QSQI010000071.797
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000071.797.fna -queryname NZ_QSQI010000071.797
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000231.798.fna -queryname NZ_QSQI010000231.798
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000231.798.fna -queryname NZ_QSQI010000231.798
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000231.798.fna -queryname NZ_QSQI010000231.798
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_ABJL020000031.7.fna -queryname NZ_ABJL020000031.7
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_ABJL020000031.7.fna -queryname NZ_ABJL020000031.7
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_ABJL020000031.7.fna -queryname NZ_ABJL020000031.7
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003661.79.fna -queryname NZ_CDQQ010003661.79
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003661.79.fna -queryname NZ_CDQQ010003661.79
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003661.79.fna -queryname NZ_CDQQ010003661.79
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000151.799.fna -queryname NZ_QSQI010000151.799
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000151.799.fna -queryname NZ_QSQI010000151.799
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000151.799.fna -queryname NZ_QSQI010000151.799
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000301.800.fna -queryname NZ_QSQI010000301.800
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000301.800.fna -queryname NZ_QSQI010000301.800
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000301.800.fna -queryname NZ_QSQI010000301.800
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000261.801.fna -queryname NZ_QSQI010000261.801
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000261.801.fna -queryname NZ_QSQI010000261.801
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000261.801.fna -queryname NZ_QSQI010000261.801
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000211.802.fna -queryname NZ_QSQI010000211.802
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000211.802.fna -queryname NZ_QSQI010000211.802
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000211.802.fna -queryname NZ_QSQI010000211.802
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000341.803.fna -queryname NZ_QSQI010000341.803
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000341.803.fna -queryname NZ_QSQI010000341.803
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000341.803.fna -queryname NZ_QSQI010000341.803
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000091.804.fna -queryname NZ_QSQI010000091.804
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000091.804.fna -queryname NZ_QSQI010000091.804
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000091.804.fna -queryname NZ_QSQI010000091.804
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000371.805.fna -queryname NZ_QSQI010000371.805
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000371.805.fna -queryname NZ_QSQI010000371.805
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000371.805.fna -queryname NZ_QSQI010000371.805
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000251.806.fna -queryname NZ_QSQI010000251.806
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000251.806.fna -queryname NZ_QSQI010000251.806
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000251.806.fna -queryname NZ_QSQI010000251.806
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000311.807.fna -queryname NZ_QSQI010000311.807
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000311.807.fna -queryname NZ_QSQI010000311.807
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000311.807.fna -queryname NZ_QSQI010000311.807
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000361.808.fna -queryname NZ_QSQI010000361.808
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000361.808.fna -queryname NZ_QSQI010000361.808
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSQI010000361.808.fna -queryname NZ_QSQI010000361.808
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006441.80.fna -queryname NZ_CDQQ010006441.80
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006441.80.fna -queryname NZ_CDQQ010006441.80
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006441.80.fna -queryname NZ_CDQQ010006441.80
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000301.809.fna -queryname NZ_QRWT010000301.809
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000301.809.fna -queryname NZ_QRWT010000301.809
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000301.809.fna -queryname NZ_QRWT010000301.809
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000661.810.fna -queryname NZ_QRWT010000661.810
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000661.810.fna -queryname NZ_QRWT010000661.810
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000661.810.fna -queryname NZ_QRWT010000661.810
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000701.811.fna -queryname NZ_QRWT010000701.811
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000701.811.fna -queryname NZ_QRWT010000701.811
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000701.811.fna -queryname NZ_QRWT010000701.811
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000061.812.fna -queryname NZ_QRWT010000061.812
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000061.812.fna -queryname NZ_QRWT010000061.812
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000061.812.fna -queryname NZ_QRWT010000061.812
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000031.813.fna -queryname NZ_QRWT010000031.813
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000031.813.fna -queryname NZ_QRWT010000031.813
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000031.813.fna -queryname NZ_QRWT010000031.813
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000601.814.fna -queryname NZ_QRWT010000601.814
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000601.814.fna -queryname NZ_QRWT010000601.814
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000601.814.fna -queryname NZ_QRWT010000601.814
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000361.815.fna -queryname NZ_QRWT010000361.815
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000361.815.fna -queryname NZ_QRWT010000361.815
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000361.815.fna -queryname NZ_QRWT010000361.815
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000481.816.fna -queryname NZ_QRWT010000481.816
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000481.816.fna -queryname NZ_QRWT010000481.816
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000481.816.fna -queryname NZ_QRWT010000481.816
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000441.817.fna -queryname NZ_QRWT010000441.817
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000441.817.fna -queryname NZ_QRWT010000441.817
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000441.817.fna -queryname NZ_QRWT010000441.817
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000181.818.fna -queryname NZ_QRWT010000181.818
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000181.818.fna -queryname NZ_QRWT010000181.818
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000181.818.fna -queryname NZ_QRWT010000181.818
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000611.81.fna -queryname NZ_CDQQ010000611.81
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000611.81.fna -queryname NZ_CDQQ010000611.81
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000611.81.fna -queryname NZ_CDQQ010000611.81
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000501.819.fna -queryname NZ_QRWT010000501.819
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000501.819.fna -queryname NZ_QRWT010000501.819
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000501.819.fna -queryname NZ_QRWT010000501.819
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000261.820.fna -queryname NZ_QRWT010000261.820
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000261.820.fna -queryname NZ_QRWT010000261.820
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000261.820.fna -queryname NZ_QRWT010000261.820
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000551.821.fna -queryname NZ_QRWT010000551.821
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000551.821.fna -queryname NZ_QRWT010000551.821
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000551.821.fna -queryname NZ_QRWT010000551.821
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000451.822.fna -queryname NZ_QRWT010000451.822
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000451.822.fna -queryname NZ_QRWT010000451.822
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000451.822.fna -queryname NZ_QRWT010000451.822
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000431.823.fna -queryname NZ_QRWT010000431.823
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000431.823.fna -queryname NZ_QRWT010000431.823
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000431.823.fna -queryname NZ_QRWT010000431.823
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000461.824.fna -queryname NZ_QRWT010000461.824
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000461.824.fna -queryname NZ_QRWT010000461.824
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000461.824.fna -queryname NZ_QRWT010000461.824
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000371.825.fna -queryname NZ_QRWT010000371.825
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000371.825.fna -queryname NZ_QRWT010000371.825
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000371.825.fna -queryname NZ_QRWT010000371.825
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000161.826.fna -queryname NZ_QRWT010000161.826
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000161.826.fna -queryname NZ_QRWT010000161.826
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000161.826.fna -queryname NZ_QRWT010000161.826
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000021.827.fna -queryname NZ_QRWT010000021.827
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000021.827.fna -queryname NZ_QRWT010000021.827
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000021.827.fna -queryname NZ_QRWT010000021.827
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000191.828.fna -queryname NZ_QRWT010000191.828
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000191.828.fna -queryname NZ_QRWT010000191.828
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000191.828.fna -queryname NZ_QRWT010000191.828
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004041.82.fna -queryname NZ_CDQQ010004041.82
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004041.82.fna -queryname NZ_CDQQ010004041.82
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010004041.82.fna -queryname NZ_CDQQ010004041.82
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000081.829.fna -queryname NZ_QRWT010000081.829
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000081.829.fna -queryname NZ_QRWT010000081.829
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000081.829.fna -queryname NZ_QRWT010000081.829
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000531.830.fna -queryname NZ_QRWT010000531.830
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000531.830.fna -queryname NZ_QRWT010000531.830
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000531.830.fna -queryname NZ_QRWT010000531.830
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000071.831.fna -queryname NZ_QRWT010000071.831
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000071.831.fna -queryname NZ_QRWT010000071.831
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000071.831.fna -queryname NZ_QRWT010000071.831
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000571.832.fna -queryname NZ_QRWT010000571.832
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000571.832.fna -queryname NZ_QRWT010000571.832
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000571.832.fna -queryname NZ_QRWT010000571.832
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000421.833.fna -queryname NZ_QRWT010000421.833
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000421.833.fna -queryname NZ_QRWT010000421.833
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000421.833.fna -queryname NZ_QRWT010000421.833
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000251.834.fna -queryname NZ_QRWT010000251.834
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000251.834.fna -queryname NZ_QRWT010000251.834
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000251.834.fna -queryname NZ_QRWT010000251.834
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000231.835.fna -queryname NZ_QRWT010000231.835
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000231.835.fna -queryname NZ_QRWT010000231.835
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000231.835.fna -queryname NZ_QRWT010000231.835
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000341.836.fna -queryname NZ_QRWT010000341.836
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000341.836.fna -queryname NZ_QRWT010000341.836
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000341.836.fna -queryname NZ_QRWT010000341.836
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000221.837.fna -queryname NZ_QRWT010000221.837
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000221.837.fna -queryname NZ_QRWT010000221.837
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000221.837.fna -queryname NZ_QRWT010000221.837
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000281.838.fna -queryname NZ_QRWT010000281.838
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000281.838.fna -queryname NZ_QRWT010000281.838
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000281.838.fna -queryname NZ_QRWT010000281.838
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003361.83.fna -queryname NZ_CDQQ010003361.83
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003361.83.fna -queryname NZ_CDQQ010003361.83
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003361.83.fna -queryname NZ_CDQQ010003361.83
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000641.839.fna -queryname NZ_QRWT010000641.839
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000641.839.fna -queryname NZ_QRWT010000641.839
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000641.839.fna -queryname NZ_QRWT010000641.839
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000131.840.fna -queryname NZ_QRWT010000131.840
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000131.840.fna -queryname NZ_QRWT010000131.840
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000131.840.fna -queryname NZ_QRWT010000131.840
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000331.841.fna -queryname NZ_QRWT010000331.841
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000331.841.fna -queryname NZ_QRWT010000331.841
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000331.841.fna -queryname NZ_QRWT010000331.841
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000291.842.fna -queryname NZ_QRWT010000291.842
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000291.842.fna -queryname NZ_QRWT010000291.842
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000291.842.fna -queryname NZ_QRWT010000291.842
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000521.843.fna -queryname NZ_QRWT010000521.843
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000521.843.fna -queryname NZ_QRWT010000521.843
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000521.843.fna -queryname NZ_QRWT010000521.843
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000681.844.fna -queryname NZ_QRWT010000681.844
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000681.844.fna -queryname NZ_QRWT010000681.844
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000681.844.fna -queryname NZ_QRWT010000681.844
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000211.845.fna -queryname NZ_QRWT010000211.845
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000211.845.fna -queryname NZ_QRWT010000211.845
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000211.845.fna -queryname NZ_QRWT010000211.845
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000351.846.fna -queryname NZ_QRWT010000351.846
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000351.846.fna -queryname NZ_QRWT010000351.846
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000351.846.fna -queryname NZ_QRWT010000351.846
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000541.847.fna -queryname NZ_QRWT010000541.847
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000541.847.fna -queryname NZ_QRWT010000541.847
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000541.847.fna -queryname NZ_QRWT010000541.847
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000121.848.fna -queryname NZ_QRWT010000121.848
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000121.848.fna -queryname NZ_QRWT010000121.848
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000121.848.fna -queryname NZ_QRWT010000121.848
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000981.84.fna -queryname NZ_CDQQ010000981.84
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000981.84.fna -queryname NZ_CDQQ010000981.84
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000981.84.fna -queryname NZ_CDQQ010000981.84
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000391.849.fna -queryname NZ_QRWT010000391.849
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000391.849.fna -queryname NZ_QRWT010000391.849
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000391.849.fna -queryname NZ_QRWT010000391.849
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000581.850.fna -queryname NZ_QRWT010000581.850
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000581.850.fna -queryname NZ_QRWT010000581.850
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000581.850.fna -queryname NZ_QRWT010000581.850
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000051.851.fna -queryname NZ_QRWT010000051.851
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000051.851.fna -queryname NZ_QRWT010000051.851
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000051.851.fna -queryname NZ_QRWT010000051.851
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000241.852.fna -queryname NZ_QRWT010000241.852
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000241.852.fna -queryname NZ_QRWT010000241.852
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000241.852.fna -queryname NZ_QRWT010000241.852
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000311.853.fna -queryname NZ_QRWT010000311.853
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000311.853.fna -queryname NZ_QRWT010000311.853
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000311.853.fna -queryname NZ_QRWT010000311.853
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000311.853.AOI.fna -queryname NZ_QRWT010000311.853
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000311.853.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000311.853.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -queryname NZ_QRWT010000311.853
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -table NZ_QRWT010000311.853.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000691.854.fna -queryname NZ_QRWT010000691.854
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000691.854.fna -queryname NZ_QRWT010000691.854
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000691.854.fna -queryname NZ_QRWT010000691.854
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000101.855.fna -queryname NZ_QRWT010000101.855
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000101.855.fna -queryname NZ_QRWT010000101.855
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000101.855.fna -queryname NZ_QRWT010000101.855
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000621.856.fna -queryname NZ_QRWT010000621.856
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000621.856.fna -queryname NZ_QRWT010000621.856
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000621.856.fna -queryname NZ_QRWT010000621.856
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000411.857.fna -queryname NZ_QRWT010000411.857
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000411.857.fna -queryname NZ_QRWT010000411.857
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000411.857.fna -queryname NZ_QRWT010000411.857
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000381.858.fna -queryname NZ_QRWT010000381.858
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000381.858.fna -queryname NZ_QRWT010000381.858
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000381.858.fna -queryname NZ_QRWT010000381.858
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002661.85.fna -queryname NZ_CDQQ010002661.85
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002661.85.fna -queryname NZ_CDQQ010002661.85
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002661.85.fna -queryname NZ_CDQQ010002661.85
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000631.859.fna -queryname NZ_QRWT010000631.859
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000631.859.fna -queryname NZ_QRWT010000631.859
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000631.859.fna -queryname NZ_QRWT010000631.859
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000091.860.fna -queryname NZ_QRWT010000091.860
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000091.860.fna -queryname NZ_QRWT010000091.860
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000091.860.fna -queryname NZ_QRWT010000091.860
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000141.861.fna -queryname NZ_QRWT010000141.861
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000141.861.fna -queryname NZ_QRWT010000141.861
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000141.861.fna -queryname NZ_QRWT010000141.861
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000401.862.fna -queryname NZ_QRWT010000401.862
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000401.862.fna -queryname NZ_QRWT010000401.862
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000401.862.fna -queryname NZ_QRWT010000401.862
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000171.863.fna -queryname NZ_QRWT010000171.863
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000171.863.fna -queryname NZ_QRWT010000171.863
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000171.863.fna -queryname NZ_QRWT010000171.863
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000201.864.fna -queryname NZ_QRWT010000201.864
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000201.864.fna -queryname NZ_QRWT010000201.864
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000201.864.fna -queryname NZ_QRWT010000201.864
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000321.865.fna -queryname NZ_QRWT010000321.865
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000321.865.fna -queryname NZ_QRWT010000321.865
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000321.865.fna -queryname NZ_QRWT010000321.865
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000151.866.fna -queryname NZ_QRWT010000151.866
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000151.866.fna -queryname NZ_QRWT010000151.866
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000151.866.fna -queryname NZ_QRWT010000151.866
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000151.866.AOI.fna -queryname NZ_QRWT010000151.866
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000151.866.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000151.866.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -queryname NZ_QRWT010000151.866
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -table NZ_QRWT010000151.866.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000271.867.fna -queryname NZ_QRWT010000271.867
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000271.867.fna -queryname NZ_QRWT010000271.867
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000271.867.fna -queryname NZ_QRWT010000271.867
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000111.868.fna -queryname NZ_QRWT010000111.868
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000111.868.fna -queryname NZ_QRWT010000111.868
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000111.868.fna -queryname NZ_QRWT010000111.868
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008301.86.fna -queryname NZ_CDQQ010008301.86
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008301.86.fna -queryname NZ_CDQQ010008301.86
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010008301.86.fna -queryname NZ_CDQQ010008301.86
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000041.869.fna -queryname NZ_QRWT010000041.869
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000041.869.fna -queryname NZ_QRWT010000041.869
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000041.869.fna -queryname NZ_QRWT010000041.869
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000491.870.fna -queryname NZ_QRWT010000491.870
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000491.870.fna -queryname NZ_QRWT010000491.870
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000491.870.fna -queryname NZ_QRWT010000491.870
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000561.871.fna -queryname NZ_QRWT010000561.871
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000561.871.fna -queryname NZ_QRWT010000561.871
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000561.871.fna -queryname NZ_QRWT010000561.871
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000711.872.fna -queryname NZ_QRWT010000711.872
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000711.872.fna -queryname NZ_QRWT010000711.872
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000711.872.fna -queryname NZ_QRWT010000711.872
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000011.873.fna -queryname NZ_QRWT010000011.873
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000011.873.fna -queryname NZ_QRWT010000011.873
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000011.873.fna -queryname NZ_QRWT010000011.873
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000651.874.fna -queryname NZ_QRWT010000651.874
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000651.874.fna -queryname NZ_QRWT010000651.874
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000651.874.fna -queryname NZ_QRWT010000651.874
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000471.875.fna -queryname NZ_QRWT010000471.875
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000471.875.fna -queryname NZ_QRWT010000471.875
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000471.875.fna -queryname NZ_QRWT010000471.875
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000591.876.fna -queryname NZ_QRWT010000591.876
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000591.876.fna -queryname NZ_QRWT010000591.876
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000591.876.fna -queryname NZ_QRWT010000591.876
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000671.877.fna -queryname NZ_QRWT010000671.877
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000671.877.fna -queryname NZ_QRWT010000671.877
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000671.877.fna -queryname NZ_QRWT010000671.877
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000611.878.fna -queryname NZ_QRWT010000611.878
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000611.878.fna -queryname NZ_QRWT010000611.878
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000611.878.fna -queryname NZ_QRWT010000611.878
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000571.87.fna -queryname NZ_CDQQ010000571.87
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000571.87.fna -queryname NZ_CDQQ010000571.87
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000571.87.fna -queryname NZ_CDQQ010000571.87
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000511.879.fna -queryname NZ_QRWT010000511.879
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000511.879.fna -queryname NZ_QRWT010000511.879
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRWT010000511.879.fna -queryname NZ_QRWT010000511.879
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000021.880.fna -queryname NZ_QSCJ010000021.880
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000021.880.fna -queryname NZ_QSCJ010000021.880
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000021.880.fna -queryname NZ_QSCJ010000021.880
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000021.880.AOI.fna -queryname NZ_QSCJ010000021.880
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000021.880.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000021.880.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -queryname NZ_QSCJ010000021.880
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -table NZ_QSCJ010000021.880.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000201.881.fna -queryname NZ_QSCJ010000201.881
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000201.881.fna -queryname NZ_QSCJ010000201.881
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000201.881.fna -queryname NZ_QSCJ010000201.881
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000271.882.fna -queryname NZ_QSCJ010000271.882
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000271.882.fna -queryname NZ_QSCJ010000271.882
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000271.882.fna -queryname NZ_QSCJ010000271.882
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000051.883.fna -queryname NZ_QSCJ010000051.883
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000051.883.fna -queryname NZ_QSCJ010000051.883
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000051.883.fna -queryname NZ_QSCJ010000051.883
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000261.884.fna -queryname NZ_QSCJ010000261.884
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000261.884.fna -queryname NZ_QSCJ010000261.884
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000261.884.fna -queryname NZ_QSCJ010000261.884
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000171.885.fna -queryname NZ_QSCJ010000171.885
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000171.885.fna -queryname NZ_QSCJ010000171.885
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000171.885.fna -queryname NZ_QSCJ010000171.885
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000151.886.fna -queryname NZ_QSCJ010000151.886
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000151.886.fna -queryname NZ_QSCJ010000151.886
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000151.886.fna -queryname NZ_QSCJ010000151.886
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000361.887.fna -queryname NZ_QSCJ010000361.887
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000361.887.fna -queryname NZ_QSCJ010000361.887
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000361.887.fna -queryname NZ_QSCJ010000361.887
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000341.888.fna -queryname NZ_QSCJ010000341.888
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000341.888.fna -queryname NZ_QSCJ010000341.888
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000341.888.fna -queryname NZ_QSCJ010000341.888
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010014061.88.fna -queryname NZ_CDQQ010014061.88
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010014061.88.fna -queryname NZ_CDQQ010014061.88
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010014061.88.fna -queryname NZ_CDQQ010014061.88
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000131.889.fna -queryname NZ_QSCJ010000131.889
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000131.889.fna -queryname NZ_QSCJ010000131.889
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000131.889.fna -queryname NZ_QSCJ010000131.889
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000101.890.fna -queryname NZ_QSCJ010000101.890
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000101.890.fna -queryname NZ_QSCJ010000101.890
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000101.890.fna -queryname NZ_QSCJ010000101.890
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000161.891.fna -queryname NZ_QSCJ010000161.891
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000161.891.fna -queryname NZ_QSCJ010000161.891
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000161.891.fna -queryname NZ_QSCJ010000161.891
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000251.892.fna -queryname NZ_QSCJ010000251.892
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000251.892.fna -queryname NZ_QSCJ010000251.892
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000251.892.fna -queryname NZ_QSCJ010000251.892
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000061.893.fna -queryname NZ_QSCJ010000061.893
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000061.893.fna -queryname NZ_QSCJ010000061.893
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000061.893.fna -queryname NZ_QSCJ010000061.893
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000121.894.fna -queryname NZ_QSCJ010000121.894
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000121.894.fna -queryname NZ_QSCJ010000121.894
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000121.894.fna -queryname NZ_QSCJ010000121.894
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000011.895.fna -queryname NZ_QSCJ010000011.895
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000011.895.fna -queryname NZ_QSCJ010000011.895
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000011.895.fna -queryname NZ_QSCJ010000011.895
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000291.896.fna -queryname NZ_QSCJ010000291.896
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000291.896.fna -queryname NZ_QSCJ010000291.896
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000291.896.fna -queryname NZ_QSCJ010000291.896
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000081.897.fna -queryname NZ_QSCJ010000081.897
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000081.897.fna -queryname NZ_QSCJ010000081.897
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000081.897.fna -queryname NZ_QSCJ010000081.897
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000091.898.fna -queryname NZ_QSCJ010000091.898
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000091.898.fna -queryname NZ_QSCJ010000091.898
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000091.898.fna -queryname NZ_QSCJ010000091.898
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000201.8.fna -queryname NZ_CDQQ010000201.8
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000201.8.fna -queryname NZ_CDQQ010000201.8
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010000201.8.fna -queryname NZ_CDQQ010000201.8
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006431.89.fna -queryname NZ_CDQQ010006431.89
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006431.89.fna -queryname NZ_CDQQ010006431.89
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006431.89.fna -queryname NZ_CDQQ010006431.89
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000231.899.fna -queryname NZ_QSCJ010000231.899
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000231.899.fna -queryname NZ_QSCJ010000231.899
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000231.899.fna -queryname NZ_QSCJ010000231.899
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000111.900.fna -queryname NZ_QSCJ010000111.900
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000111.900.fna -queryname NZ_QSCJ010000111.900
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000111.900.fna -queryname NZ_QSCJ010000111.900
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000071.901.fna -queryname NZ_QSCJ010000071.901
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000071.901.fna -queryname NZ_QSCJ010000071.901
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000071.901.fna -queryname NZ_QSCJ010000071.901
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000141.902.fna -queryname NZ_QSCJ010000141.902
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000141.902.fna -queryname NZ_QSCJ010000141.902
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000141.902.fna -queryname NZ_QSCJ010000141.902
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000181.903.fna -queryname NZ_QSCJ010000181.903
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000181.903.fna -queryname NZ_QSCJ010000181.903
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000181.903.fna -queryname NZ_QSCJ010000181.903
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000321.904.fna -queryname NZ_QSCJ010000321.904
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000321.904.fna -queryname NZ_QSCJ010000321.904
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000321.904.fna -queryname NZ_QSCJ010000321.904
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000031.905.fna -queryname NZ_QSCJ010000031.905
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000031.905.fna -queryname NZ_QSCJ010000031.905
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000031.905.fna -queryname NZ_QSCJ010000031.905
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000241.906.fna -queryname NZ_QSCJ010000241.906
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000241.906.fna -queryname NZ_QSCJ010000241.906
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000241.906.fna -queryname NZ_QSCJ010000241.906
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000041.907.fna -queryname NZ_QSCJ010000041.907
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000041.907.fna -queryname NZ_QSCJ010000041.907
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000041.907.fna -queryname NZ_QSCJ010000041.907
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000351.908.fna -queryname NZ_QSCJ010000351.908
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000351.908.fna -queryname NZ_QSCJ010000351.908
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000351.908.fna -queryname NZ_QSCJ010000351.908
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003671.90.fna -queryname NZ_CDQQ010003671.90
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003671.90.fna -queryname NZ_CDQQ010003671.90
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003671.90.fna -queryname NZ_CDQQ010003671.90
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000331.909.fna -queryname NZ_QSCJ010000331.909
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000331.909.fna -queryname NZ_QSCJ010000331.909
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000331.909.fna -queryname NZ_QSCJ010000331.909
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000211.910.fna -queryname NZ_QSCJ010000211.910
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000211.910.fna -queryname NZ_QSCJ010000211.910
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000211.910.fna -queryname NZ_QSCJ010000211.910
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000311.911.fna -queryname NZ_QSCJ010000311.911
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000311.911.fna -queryname NZ_QSCJ010000311.911
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000311.911.fna -queryname NZ_QSCJ010000311.911
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000221.912.fna -queryname NZ_QSCJ010000221.912
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000221.912.fna -queryname NZ_QSCJ010000221.912
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000221.912.fna -queryname NZ_QSCJ010000221.912
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000301.913.fna -queryname NZ_QSCJ010000301.913
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000301.913.fna -queryname NZ_QSCJ010000301.913
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000301.913.fna -queryname NZ_QSCJ010000301.913
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000191.914.fna -queryname NZ_QSCJ010000191.914
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000191.914.fna -queryname NZ_QSCJ010000191.914
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000191.914.fna -queryname NZ_QSCJ010000191.914
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000191.914.AOI.fna -queryname NZ_QSCJ010000191.914
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000191.914.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000191.914.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -queryname NZ_QSCJ010000191.914
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -table NZ_QSCJ010000191.914.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000281.915.fna -queryname NZ_QSCJ010000281.915
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000281.915.fna -queryname NZ_QSCJ010000281.915
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSCJ010000281.915.fna -queryname NZ_QSCJ010000281.915
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000231.916.fna -queryname NZ_QRZF010000231.916
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000231.916.fna -queryname NZ_QRZF010000231.916
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000231.916.fna -queryname NZ_QRZF010000231.916
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000061.917.fna -queryname NZ_QRZF010000061.917
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000061.917.fna -queryname NZ_QRZF010000061.917
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000061.917.fna -queryname NZ_QRZF010000061.917
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000401.918.fna -queryname NZ_QRZF010000401.918
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000401.918.fna -queryname NZ_QRZF010000401.918
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000401.918.fna -queryname NZ_QRZF010000401.918
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002721.91.fna -queryname NZ_CDQQ010002721.91
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002721.91.fna -queryname NZ_CDQQ010002721.91
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002721.91.fna -queryname NZ_CDQQ010002721.91
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000181.919.fna -queryname NZ_QRZF010000181.919
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000181.919.fna -queryname NZ_QRZF010000181.919
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000181.919.fna -queryname NZ_QRZF010000181.919
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000381.920.fna -queryname NZ_QRZF010000381.920
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000381.920.fna -queryname NZ_QRZF010000381.920
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000381.920.fna -queryname NZ_QRZF010000381.920
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000461.921.fna -queryname NZ_QRZF010000461.921
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000461.921.fna -queryname NZ_QRZF010000461.921
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000461.921.fna -queryname NZ_QRZF010000461.921
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000151.922.fna -queryname NZ_QRZF010000151.922
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000151.922.fna -queryname NZ_QRZF010000151.922
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000151.922.fna -queryname NZ_QRZF010000151.922
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000131.923.fna -queryname NZ_QRZF010000131.923
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000131.923.fna -queryname NZ_QRZF010000131.923
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000131.923.fna -queryname NZ_QRZF010000131.923
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000421.924.fna -queryname NZ_QRZF010000421.924
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000421.924.fna -queryname NZ_QRZF010000421.924
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000421.924.fna -queryname NZ_QRZF010000421.924
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000361.925.fna -queryname NZ_QRZF010000361.925
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000361.925.fna -queryname NZ_QRZF010000361.925
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000361.925.fna -queryname NZ_QRZF010000361.925
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000021.926.fna -queryname NZ_QRZF010000021.926
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000021.926.fna -queryname NZ_QRZF010000021.926
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000021.926.fna -queryname NZ_QRZF010000021.926
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000521.927.fna -queryname NZ_QRZF010000521.927
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000521.927.fna -queryname NZ_QRZF010000521.927
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000521.927.fna -queryname NZ_QRZF010000521.927
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000531.928.fna -queryname NZ_QRZF010000531.928
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000531.928.fna -queryname NZ_QRZF010000531.928
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000531.928.fna -queryname NZ_QRZF010000531.928
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006021.92.fna -queryname NZ_CDQQ010006021.92
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006021.92.fna -queryname NZ_CDQQ010006021.92
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006021.92.fna -queryname NZ_CDQQ010006021.92
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000351.929.fna -queryname NZ_QRZF010000351.929
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000351.929.fna -queryname NZ_QRZF010000351.929
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000351.929.fna -queryname NZ_QRZF010000351.929
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000441.930.fna -queryname NZ_QRZF010000441.930
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000441.930.fna -queryname NZ_QRZF010000441.930
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000441.930.fna -queryname NZ_QRZF010000441.930
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000091.931.fna -queryname NZ_QRZF010000091.931
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000091.931.fna -queryname NZ_QRZF010000091.931
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000091.931.fna -queryname NZ_QRZF010000091.931
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000501.932.fna -queryname NZ_QRZF010000501.932
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000501.932.fna -queryname NZ_QRZF010000501.932
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000501.932.fna -queryname NZ_QRZF010000501.932
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000191.933.fna -queryname NZ_QRZF010000191.933
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000191.933.fna -queryname NZ_QRZF010000191.933
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000191.933.fna -queryname NZ_QRZF010000191.933
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000371.934.fna -queryname NZ_QRZF010000371.934
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000371.934.fna -queryname NZ_QRZF010000371.934
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000371.934.fna -queryname NZ_QRZF010000371.934
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000271.935.fna -queryname NZ_QRZF010000271.935
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000271.935.fna -queryname NZ_QRZF010000271.935
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000271.935.fna -queryname NZ_QRZF010000271.935
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000161.936.fna -queryname NZ_QRZF010000161.936
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000161.936.fna -queryname NZ_QRZF010000161.936
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000161.936.fna -queryname NZ_QRZF010000161.936
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000071.937.fna -queryname NZ_QRZF010000071.937
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000071.937.fna -queryname NZ_QRZF010000071.937
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000071.937.fna -queryname NZ_QRZF010000071.937
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000211.938.fna -queryname NZ_QRZF010000211.938
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000211.938.fna -queryname NZ_QRZF010000211.938
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000211.938.fna -queryname NZ_QRZF010000211.938
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002761.93.fna -queryname NZ_CDQQ010002761.93
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002761.93.fna -queryname NZ_CDQQ010002761.93
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010002761.93.fna -queryname NZ_CDQQ010002761.93
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000471.939.fna -queryname NZ_QRZF010000471.939
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000471.939.fna -queryname NZ_QRZF010000471.939
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000471.939.fna -queryname NZ_QRZF010000471.939
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000241.940.fna -queryname NZ_QRZF010000241.940
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000241.940.fna -queryname NZ_QRZF010000241.940
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000241.940.fna -queryname NZ_QRZF010000241.940
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000281.941.fna -queryname NZ_QRZF010000281.941
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000281.941.fna -queryname NZ_QRZF010000281.941
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000281.941.fna -queryname NZ_QRZF010000281.941
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000321.942.fna -queryname NZ_QRZF010000321.942
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000321.942.fna -queryname NZ_QRZF010000321.942
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000321.942.fna -queryname NZ_QRZF010000321.942
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000261.943.fna -queryname NZ_QRZF010000261.943
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000261.943.fna -queryname NZ_QRZF010000261.943
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000261.943.fna -queryname NZ_QRZF010000261.943
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000391.944.fna -queryname NZ_QRZF010000391.944
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000391.944.fna -queryname NZ_QRZF010000391.944
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000391.944.fna -queryname NZ_QRZF010000391.944
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000511.945.fna -queryname NZ_QRZF010000511.945
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000511.945.fna -queryname NZ_QRZF010000511.945
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000511.945.fna -queryname NZ_QRZF010000511.945
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000171.946.fna -queryname NZ_QRZF010000171.946
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000171.946.fna -queryname NZ_QRZF010000171.946
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000171.946.fna -queryname NZ_QRZF010000171.946
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000081.947.fna -queryname NZ_QRZF010000081.947
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000081.947.fna -queryname NZ_QRZF010000081.947
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000081.947.fna -queryname NZ_QRZF010000081.947
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000081.947.AOI.fna -queryname NZ_QRZF010000081.947
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000081.947.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000081.947.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -queryname NZ_QRZF010000081.947
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -table NZ_QRZF010000081.947.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000111.948.fna -queryname NZ_QRZF010000111.948
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000111.948.fna -queryname NZ_QRZF010000111.948
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000111.948.fna -queryname NZ_QRZF010000111.948
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003941.94.fna -queryname NZ_CDQQ010003941.94
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003941.94.fna -queryname NZ_CDQQ010003941.94
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003941.94.fna -queryname NZ_CDQQ010003941.94
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000411.949.fna -queryname NZ_QRZF010000411.949
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000411.949.fna -queryname NZ_QRZF010000411.949
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000411.949.fna -queryname NZ_QRZF010000411.949
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000221.950.fna -queryname NZ_QRZF010000221.950
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000221.950.fna -queryname NZ_QRZF010000221.950
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000221.950.fna -queryname NZ_QRZF010000221.950
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000291.951.fna -queryname NZ_QRZF010000291.951
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000291.951.fna -queryname NZ_QRZF010000291.951
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000291.951.fna -queryname NZ_QRZF010000291.951
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000121.952.fna -queryname NZ_QRZF010000121.952
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000121.952.fna -queryname NZ_QRZF010000121.952
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000121.952.fna -queryname NZ_QRZF010000121.952
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000031.953.fna -queryname NZ_QRZF010000031.953
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000031.953.fna -queryname NZ_QRZF010000031.953
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000031.953.fna -queryname NZ_QRZF010000031.953
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000431.954.fna -queryname NZ_QRZF010000431.954
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000431.954.fna -queryname NZ_QRZF010000431.954
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000431.954.fna -queryname NZ_QRZF010000431.954
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000341.955.fna -queryname NZ_QRZF010000341.955
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000341.955.fna -queryname NZ_QRZF010000341.955
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000341.955.fna -queryname NZ_QRZF010000341.955
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000331.956.fna -queryname NZ_QRZF010000331.956
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000331.956.fna -queryname NZ_QRZF010000331.956
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000331.956.fna -queryname NZ_QRZF010000331.956
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000481.957.fna -queryname NZ_QRZF010000481.957
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000481.957.fna -queryname NZ_QRZF010000481.957
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000481.957.fna -queryname NZ_QRZF010000481.957
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000041.958.fna -queryname NZ_QRZF010000041.958
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000041.958.fna -queryname NZ_QRZF010000041.958
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000041.958.fna -queryname NZ_QRZF010000041.958
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010010911.95.fna -queryname NZ_CDQQ010010911.95
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010010911.95.fna -queryname NZ_CDQQ010010911.95
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010010911.95.fna -queryname NZ_CDQQ010010911.95
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000101.959.fna -queryname NZ_QRZF010000101.959
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000101.959.fna -queryname NZ_QRZF010000101.959
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000101.959.fna -queryname NZ_QRZF010000101.959
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000451.960.fna -queryname NZ_QRZF010000451.960
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000451.960.fna -queryname NZ_QRZF010000451.960
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000451.960.fna -queryname NZ_QRZF010000451.960
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000011.961.fna -queryname NZ_QRZF010000011.961
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000011.961.fna -queryname NZ_QRZF010000011.961
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000011.961.fna -queryname NZ_QRZF010000011.961
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000011.961.AOI.fna -queryname NZ_QRZF010000011.961
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000011.961.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000011.961.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -queryname NZ_QRZF010000011.961
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -table NZ_QRZF010000011.961.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000251.962.fna -queryname NZ_QRZF010000251.962
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000251.962.fna -queryname NZ_QRZF010000251.962
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000251.962.fna -queryname NZ_QRZF010000251.962
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000491.963.fna -queryname NZ_QRZF010000491.963
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000491.963.fna -queryname NZ_QRZF010000491.963
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000491.963.fna -queryname NZ_QRZF010000491.963
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000301.964.fna -queryname NZ_QRZF010000301.964
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000301.964.fna -queryname NZ_QRZF010000301.964
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000301.964.fna -queryname NZ_QRZF010000301.964
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000201.965.fna -queryname NZ_QRZF010000201.965
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000201.965.fna -queryname NZ_QRZF010000201.965
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000201.965.fna -queryname NZ_QRZF010000201.965
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000311.966.fna -queryname NZ_QRZF010000311.966
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000311.966.fna -queryname NZ_QRZF010000311.966
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000311.966.fna -queryname NZ_QRZF010000311.966
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000051.967.fna -queryname NZ_QRZF010000051.967
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000051.967.fna -queryname NZ_QRZF010000051.967
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000051.967.fna -queryname NZ_QRZF010000051.967
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000141.968.fna -queryname NZ_QRZF010000141.968
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000141.968.fna -queryname NZ_QRZF010000141.968
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QRZF010000141.968.fna -queryname NZ_QRZF010000141.968
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007091.96.fna -queryname NZ_CDQQ010007091.96
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007091.96.fna -queryname NZ_CDQQ010007091.96
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010007091.96.fna -queryname NZ_CDQQ010007091.96
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000171.969.fna -queryname NZ_QSFN010000171.969
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000171.969.fna -queryname NZ_QSFN010000171.969
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000171.969.fna -queryname NZ_QSFN010000171.969
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000091.970.fna -queryname NZ_QSFN010000091.970
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000091.970.fna -queryname NZ_QSFN010000091.970
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000091.970.fna -queryname NZ_QSFN010000091.970
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000211.971.fna -queryname NZ_QSFN010000211.971
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000211.971.fna -queryname NZ_QSFN010000211.971
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000211.971.fna -queryname NZ_QSFN010000211.971
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000161.972.fna -queryname NZ_QSFN010000161.972
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000161.972.fna -queryname NZ_QSFN010000161.972
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000161.972.fna -queryname NZ_QSFN010000161.972
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000081.973.fna -queryname NZ_QSFN010000081.973
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000081.973.fna -queryname NZ_QSFN010000081.973
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000081.973.fna -queryname NZ_QSFN010000081.973
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000201.974.fna -queryname NZ_QSFN010000201.974
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000201.974.fna -queryname NZ_QSFN010000201.974
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000201.974.fna -queryname NZ_QSFN010000201.974
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000361.975.fna -queryname NZ_QSFN010000361.975
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000361.975.fna -queryname NZ_QSFN010000361.975
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000361.975.fna -queryname NZ_QSFN010000361.975
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000261.976.fna -queryname NZ_QSFN010000261.976
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000261.976.fna -queryname NZ_QSFN010000261.976
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000261.976.fna -queryname NZ_QSFN010000261.976
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000241.977.fna -queryname NZ_QSFN010000241.977
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000241.977.fna -queryname NZ_QSFN010000241.977
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000241.977.fna -queryname NZ_QSFN010000241.977
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000311.978.fna -queryname NZ_QSFN010000311.978
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000311.978.fna -queryname NZ_QSFN010000311.978
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000311.978.fna -queryname NZ_QSFN010000311.978
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006091.97.fna -queryname NZ_CDQQ010006091.97
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006091.97.fna -queryname NZ_CDQQ010006091.97
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010006091.97.fna -queryname NZ_CDQQ010006091.97
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000221.979.fna -queryname NZ_QSFN010000221.979
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000221.979.fna -queryname NZ_QSFN010000221.979
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000221.979.fna -queryname NZ_QSFN010000221.979
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000061.980.fna -queryname NZ_QSFN010000061.980
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000061.980.fna -queryname NZ_QSFN010000061.980
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000061.980.fna -queryname NZ_QSFN010000061.980
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000251.981.fna -queryname NZ_QSFN010000251.981
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000251.981.fna -queryname NZ_QSFN010000251.981
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000251.981.fna -queryname NZ_QSFN010000251.981
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000151.982.fna -queryname NZ_QSFN010000151.982
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000151.982.fna -queryname NZ_QSFN010000151.982
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000151.982.fna -queryname NZ_QSFN010000151.982
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000041.983.fna -queryname NZ_QSFN010000041.983
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000041.983.fna -queryname NZ_QSFN010000041.983
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000041.983.fna -queryname NZ_QSFN010000041.983
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000101.984.fna -queryname NZ_QSFN010000101.984
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000101.984.fna -queryname NZ_QSFN010000101.984
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000101.984.fna -queryname NZ_QSFN010000101.984
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000231.985.fna -queryname NZ_QSFN010000231.985
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000231.985.fna -queryname NZ_QSFN010000231.985
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000231.985.fna -queryname NZ_QSFN010000231.985
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000411.986.fna -queryname NZ_QSFN010000411.986
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000411.986.fna -queryname NZ_QSFN010000411.986
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000411.986.fna -queryname NZ_QSFN010000411.986
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000341.987.fna -queryname NZ_QSFN010000341.987
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000341.987.fna -queryname NZ_QSFN010000341.987
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000341.987.fna -queryname NZ_QSFN010000341.987
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000111.988.fna -queryname NZ_QSFN010000111.988
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000111.988.fna -queryname NZ_QSFN010000111.988
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000111.988.fna -queryname NZ_QSFN010000111.988
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003901.98.fna -queryname NZ_CDQQ010003901.98
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003901.98.fna -queryname NZ_CDQQ010003901.98
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_CDQQ010003901.98.fna -queryname NZ_CDQQ010003901.98
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000121.989.fna -queryname NZ_QSFN010000121.989
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000121.989.fna -queryname NZ_QSFN010000121.989
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000121.989.fna -queryname NZ_QSFN010000121.989
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000281.990.fna -queryname NZ_QSFN010000281.990
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000281.990.fna -queryname NZ_QSFN010000281.990
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000281.990.fna -queryname NZ_QSFN010000281.990
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000401.991.fna -queryname NZ_QSFN010000401.991
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000401.991.fna -queryname NZ_QSFN010000401.991
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000401.991.fna -queryname NZ_QSFN010000401.991
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000381.992.fna -queryname NZ_QSFN010000381.992
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000381.992.fna -queryname NZ_QSFN010000381.992
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000381.992.fna -queryname NZ_QSFN010000381.992
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000391.993.fna -queryname NZ_QSFN010000391.993
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000391.993.fna -queryname NZ_QSFN010000391.993
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000391.993.fna -queryname NZ_QSFN010000391.993
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000291.994.fna -queryname NZ_QSFN010000291.994
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000291.994.fna -queryname NZ_QSFN010000291.994
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000291.994.fna -queryname NZ_QSFN010000291.994
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000351.995.fna -queryname NZ_QSFN010000351.995
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000351.995.fna -queryname NZ_QSFN010000351.995
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000351.995.fna -queryname NZ_QSFN010000351.995
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000031.996.fna -queryname NZ_QSFN010000031.996
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000031.996.fna -queryname NZ_QSFN010000031.996
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000031.996.fna -queryname NZ_QSFN010000031.996
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000051.997.fna -queryname NZ_QSFN010000051.997
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000051.997.fna -queryname NZ_QSFN010000051.997
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000051.997.fna -queryname NZ_QSFN010000051.997
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000071.998.fna -queryname NZ_QSFN010000071.998
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000071.998.fna -queryname NZ_QSFN010000071.998
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result/NZ_QSFN010000071.998.fna -queryname NZ_QSFN010000071.998
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Bacteroidaceae//Bacteroides_intestinalis.result