{ "AOIs": [ { "name": "NZ_QRTN010000521.169.AOI_01", "filename": "/data/pg-molgen/USERS/Vicky/Genomes_Bacteroidales/Bacteriodaceae/Bacteroides_dorei/GCF_000156075.1_ASM15607v1_genomic.fna", "color": "gray", "yline": 10, "xstart": 5, "points": [ {"x":0,"y":10}, {"x":800,"y":10} ] } ], "Genes": [ { "name": "orf00001", "orfname": "orf00001", "gene_start": 258, "gene_end": 440, "gene_strand": "-", "real_start": 8657, "real_end": 8839 , "real_strand": "+", "name": "orf00001", "color": "#d5dce8", "yline": 10, "angle": -60, "xtext": 3.83642959217324, "motifs": "", "function": "", "annotation":"", "protein":"MVTDYIRDAFSLPENFSYYTQKIIFIQILTRGKILSIRCTWLYLFPLSSFLRKFIVSKTR", "dna":"ATGGTAACTGACTATATCCGGGATGCGTTTTCGCTCCCGGAAAACTTCTCATATTACACACAAAAAATCATATTTATACAAATTTTAACACGCGGAAAAATCCTCTCAATCCGTTGCACTTGGCTTTACCTATTTCCACTCTCTTCCTTTCTTCGGAAATTTATCGTATCAAAAACAAGG", "points": [{"x":2.83609981312521,"y":1},{"x":3.23609981312521,"y":2},{"x":4.83675937122128,"y":2},{"x":4.83675937122128,"y":0},{"x":3.23609981312521,"y":0}]} ,{ "name": "orf00002", "orfname": "orf00002", "gene_start": 434, "gene_end": 748, "gene_strand": "-", "real_start": 8349, "real_end": 8663 , "real_strand": "+", "name": "orf00002", "color": "#8fbcb9", "yline": 10, "angle": -60, "xtext": 6.49664724634495, "motifs": "", "function": "Antitoxin HipB OS=Shewanella oneidensis (strain MR-1) OX=211586 GN=hipB PE=1 SV=2", "annotation":"Species='-'
match=34.483%|Evalue=6.66e-05
UniRef:sp|Q8EIX4|HIPB_SHEON", "protein":"MEAKKFYTLEEIEDKYIGEKGTPKRDAYEEELNSFLIGEAIKQARQSKNLTQEELGNLIGVQRAQISRIENGKNLTFSTIARVFKAMGISAKLEIGSMGKVALW", "dna":"ATGGAAGCAAAGAAATTTTATACACTCGAAGAAATCGAAGATAAATACATCGGAGAAAAAGGTACTCCCAAACGTGATGCCTACGAAGAAGAACTTAACTCTTTTTTGATAGGTGAAGCCATTAAACAGGCTCGCCAATCAAAGAACTTAACCCAAGAGGAATTAGGCAATTTGATAGGAGTGCAGCGGGCTCAAATCTCCCGAATTGAAAACGGTAAGAATTTAACCTTTTCCACCATTGCAAGAGTTTTTAAGGCTATGGGGATAAGTGCTAAACTTGAAATCGGAAGCATGGGTAAAGTTGCATTATGG", "points": [{"x":4.77080356161372,"y":1},{"x":5.17080356161372,"y":2},{"x":8.22249093107618,"y":2},{"x":8.22249093107618,"y":0},{"x":5.17080356161372,"y":0}]} ,{ "name": "orf00004", "orfname": "orf00004", "gene_start": 754, "gene_end": 1143, "gene_strand": "-", "real_start": 7954, "real_end": 8343 , "real_strand": "+", "name": "orf00004", "color": "#d5dce8", "yline": 10, "angle": -60, "xtext": 10.4265142354622, "motifs": "", "function": "", "annotation":"", "protein":"METNCYICNTKKLYMEAKSRFKVKLSNEAQEFLDGLPNKVREKIISNIRKSTFVLDPDLFKKLDDTDIWEFRTFYNKTKYRLLAFWDKGDKINTLVIATHGFIKKTQKTPLKEIAKAEEIRKDYFNSKR", "dna":"ATGGAAACAAATTGTTATATTTGCAACACTAAAAAACTTTATATGGAAGCAAAATCAAGATTCAAGGTCAAATTATCCAACGAAGCCCAAGAGTTTTTAGACGGATTGCCCAACAAGGTACGTGAGAAGATCATTAGCAATATTCGTAAATCCACCTTTGTACTTGATCCTGATTTATTCAAGAAATTGGATGATACGGATATCTGGGAGTTCAGAACGTTCTATAACAAAACCAAGTACAGGCTTCTTGCTTTTTGGGATAAGGGCGATAAGATAAACACTCTGGTAATCGCAACGCACGGGTTTATCAAGAAAACCCAAAAGACACCCCTCAAAGAAATAGCCAAAGCCGAAGAGATTAGAAAAGATTATTTTAATTCAAAAAGA", "points": [{"x":8.28844674068374,"y":1},{"x":8.68844674068374,"y":2},{"x":12.5645817302407,"y":2},{"x":12.5645817302407,"y":0},{"x":8.68844674068374,"y":0}]} ,{ "name": "sORF_6", "orfname": "sORF_6", "gene_start": 1163, "gene_end": 1408, "gene_strand": "-", "real_start": 7689, "real_end": 7934 , "real_strand": "+", "name": "sORF_6", "color": "#d5dce8", "yline": 10, "angle": -60, "xtext": 14.1310322084204, "motifs": "RBS=CACAATTTCAAACTAATT
", "function": "", "annotation":"", "protein":"VVKKLKRLIFSRNPVGQEEKQGKARFPLAVLSTAEQSTNTLPCGTAKARTRGTRRSRSEALRKNLFHKQKTHQNGTTGCIKx", "dna":"GTGGTTAAAAAACTTAAACGGCTGATATTCAGCCGTAATCCCGTAGGGCAAGAGGAAAAACAGGGCAAAGCCCGGTTTCCTCTTGCTGTTCTTTCGACTGCCGAGCAATCGACGAACACCCTCCCCTGCGGTACGGCGAAAGCTCGTACAAGGGGGACGAGGAGAAGTCGGAGCGAGGCACTAAGAAAGAACCTATTCCACAAACAAAAAACACATCAAAACGGCACAACAGGCTGCATAAAATAA", "points": [{"x":12.7844344289326,"y":1},{"x":13.1844344289326,"y":2},{"x":15.4776299879081,"y":2},{"x":15.4776299879081,"y":0},{"x":13.1844344289326,"y":0}]} ,{ "name": "sORF_1", "orfname": "sORF_1", "gene_start": 1180, "gene_end": 1380, "gene_strand": "+", "real_start": 7717, "real_end": 7917 , "real_strand": "-", "name": "sORF_1", "color": "#d5dce8", "yline": 10, "angle": -60, "xtext": 14.0705727162801, "motifs": "RBS=TTTATTTTATGCAGCCTG
", "function": "", "annotation":"", "protein":"LCRFDVFFVCGIGSFLVPRSDFSSSPLYELSPYRRGGCSSIARQSKEQQEETGLCPVFPLALRDYGx", "dna":"TTGTGCCGTTTTGATGTGTTTTTTGTTTGTGGAATAGGTTCTTTCTTAGTGCCTCGCTCCGACTTCTCCTCGTCCCCCTTGTACGAGCTTTCGCCGTACCGCAGGGGAGGGTGTTCGTCGATTGCTCGGCAGTCGAAAGAACAGCAAGAGGAAACCGGGCTTTGCCCTGTTTTTCCTCTTGCCCTACGGGATTACGGCTGA", "points": [{"x":12.9713092228207,"y":0},{"x":12.9713092228207,"y":2},{"x":14.7698362097395,"y":2},{"x":15.1698362097395,"y":1},{"x":14.7698362097395,"y":0}]} ,{ "name": "sORF_7", "orfname": "sORF_7", "gene_start": 1225, "gene_end": 1326, "gene_strand": "-", "real_start": 7771, "real_end": 7872 , "real_strand": "+", "name": "sORF_7", "color": "#d5dce8", "yline": 10, "angle": -60, "xtext": 14.0211058590744, "motifs": "RBS=GCAAAGCCCGGTTTCCTC
", "function": "", "annotation":"", "protein":"LLFFRLPSNRRTPSPAVRRKLVQGGRGEVGARHx", "dna":"TTGCTGTTCTTTCGACTGCCGAGCAATCGACGAACACCCTCCCCTGCGGTACGGCGAAAGCTCGTACAAGGGGGACGAGGAGAAGTCGGAGCGAGGCACTAA", "points": [{"x":13.4659777948774,"y":1},{"x":13.8659777948774,"y":2},{"x":14.5762339232714,"y":2},{"x":14.5762339232714,"y":0},{"x":13.8659777948774,"y":0}]} ,{ "name": "sORF_2", "orfname": "sORF_2", "gene_start": 1258, "gene_end": 1380, "gene_strand": "+", "real_start": 7717, "real_end": 7839 , "real_strand": "-", "name": "sORF_2", "color": "#d5dce8", "yline": 10, "angle": -60, "xtext": 14.4992854787293, "motifs": "RBS=TTCTCCTCGTCCCCC
", "function": "", "annotation":"", "protein":"LYELSPYRRGGCSSIARQSKEQQEETGLCPVFPLALRDYGx", "dna":"TTGTACGAGCTTTCGCCGTACCGCAGGGGAGGGTGTTCGTCGATTGCTCGGCAGTCGAAAGAACAGCAAGAGGAAACCGGGCTTTGCCCTGTTTTTCCTCTTGCCCTACGGGATTACGGCTGA", "points": [{"x":13.828734747719,"y":0},{"x":13.828734747719,"y":2},{"x":14.7698362097395,"y":2},{"x":15.1698362097395,"y":1},{"x":14.7698362097395,"y":0}]} ,{ "name": "sORF_3", "orfname": "sORF_3", "gene_start": 1341, "gene_end": 1460, "gene_strand": "+", "real_start": 7637, "real_end": 7756 , "real_strand": "-", "name": "sORF_3", "color": "#d5dce8", "yline": 10, "angle": -60, "xtext": 15.3951852258986, "motifs": "RBS=CAAGAGGAAACCGGGCT
", "function": "", "annotation":"", "protein":"LPCFSSCPTGLRLNISRLSFLTTISLKLWLKLYLCKSEIx", "dna":"TTGCCCTGTTTTTCCTCTTGCCCTACGGGATTACGGCTGAATATCAGCCGTTTAAGTTTTTTAACCACAATTAGTTTGAAATTGTGGTTAAAATTATACCTTTGTAAATCAGAGATTTAA", "points": [{"x":14.7411234472903,"y":0},{"x":14.7411234472903,"y":2},{"x":15.649247004507,"y":2},{"x":16.049247004507,"y":1},{"x":15.649247004507,"y":0}]} ,{ "name": "orf00006", "orfname": "orf00006", "gene_start": 1492, "gene_end": 2097, "gene_strand": "+", "real_start": 7000, "real_end": 7605 , "real_strand": "-", "name": "orf00006", "color": "#d5dce8", "yline": 10, "angle": -60, "xtext": 19.7262833901286, "motifs": "", "function": "", "annotation":"", "protein":"MDKETTTSVTIDRKTFARLDRLAKSNNVSKKDFLSCALEYFEKYGINPVEHESPAKEMQKLIKRCDQVIAFIRKQEQDFLRPACEAMGSTSMRVTMSMDSILTEKKFSQYQKDNDLFMRDLASLAGIREQALDRAEKVVGQSRDMLLKNQQAIYARLEAVTQRQEKIFSYIASYIDAKGKAGLFDDIKALYKDEKNKREKI", "dna":"ATGGATAAAGAAACAACCACTTCTGTCACCATTGATCGAAAAACGTTTGCCCGGCTTGACAGGCTGGCAAAGTCCAATAATGTATCAAAGAAAGACTTCCTTTCCTGTGCGCTGGAATACTTCGAGAAGTACGGCATCAACCCGGTTGAACATGAAAGTCCGGCAAAGGAAATGCAGAAACTTATCAAACGCTGTGATCAGGTGATAGCGTTCATCAGGAAGCAGGAGCAGGATTTCTTGCGTCCGGCTTGTGAAGCCATGGGCAGTACAAGCATGAGAGTGACCATGAGCATGGACTCGATACTTACGGAAAAAAAGTTTAGCCAATACCAAAAGGACAATGACCTATTCATGCGTGATCTTGCAAGCCTTGCCGGGATAAGGGAGCAGGCTTTGGACCGGGCGGAAAAGGTAGTCGGTCAGTCGAGGGATATGCTTCTGAAGAACCAACAAGCCATTTATGCAAGGCTGGAGGCTGTGACGCAAAGGCAGGAGAAGATCTTCTCCTATATCGCAAGCTACATCGACGCGAAAGGAAAAGCCGGGCTTTTCGATGATATAAAAGCCTTGTACAAGGACGAGAAGAACAAAAGGGAAAAGATA", "points": [{"x":16.401011322414,"y":0},{"x":16.401011322414,"y":2},{"x":22.6515554578432,"y":2},{"x":23.0515554578432,"y":1},{"x":22.6515554578432,"y":0}]} ,{ "name": "orf00008", "orfname": "orf00008", "gene_start": 2157, "gene_end": 2972, "gene_strand": "+", "real_start": 6125, "real_end": 6940 , "real_strand": "-", "name": "orf00008", "color": "#d5dce8", "yline": 10, "angle": -60, "xtext": 28.1906122897659, "motifs": "", "function": "", "annotation":"", "protein":"VTNYLQHEDLERMKKGEEVQPFFNQFRDYVSAREVTFKIDNNKAKLSRTDAKFYVITVSPSEKELRCMGRTPQERAEALQRYIRQDVMRNYAEGFGKGLRSDDVEYYAKIHFNRDGDSDSDMHAHIIVSRKDRSNTKKLSPKTNHTGKKNCGNVKGGFDRTDFFRKCESSFDRCMGFDREPEESFDYLNAVKNGSPAEIARQVERAERIRKEKWDNLKAELQSRQEPEKSKIQQVEKTPDIEQPIPKKKQQEEDLELLKKPKRSRGFGMGM", "dna":"GTGACGAACTATCTCCAGCATGAGGATCTGGAGAGGATGAAGAAAGGGGAGGAGGTGCAGCCGTTCTTCAACCAGTTCCGGGACTACGTGAGCGCAAGGGAGGTCACATTCAAGATAGACAACAACAAGGCGAAGTTAAGCCGGACTGACGCAAAGTTCTATGTTATCACCGTCAGCCCTTCAGAGAAGGAGCTGCGCTGCATGGGCAGGACTCCGCAGGAGCGTGCGGAAGCCTTGCAGCGGTACATCCGGCAGGACGTGATGAGAAACTATGCAGAGGGTTTCGGAAAAGGCTTGAGAAGCGATGATGTGGAATATTACGCAAAGATCCATTTCAACCGGGACGGTGACAGTGACAGCGATATGCACGCACATATCATCGTCAGTCGGAAAGACCGGAGCAACACCAAAAAGTTAAGCCCTAAAACGAACCACACCGGAAAGAAGAACTGCGGCAACGTGAAGGGAGGTTTTGACCGGACGGATTTTTTCCGGAAGTGTGAAAGCTCTTTTGATCGGTGCATGGGGTTTGACCGGGAGCCGGAGGAAAGCTTCGACTATCTTAACGCTGTCAAGAACGGAAGCCCGGCGGAAATAGCCCGGCAGGTGGAACGTGCGGAACGCATCAGAAAGGAGAAATGGGACAATCTCAAAGCGGAGCTTCAATCCCGGCAGGAACCGGAGAAGTCAAAAATTCAACAGGTGGAGAAAACGCCGGACATCGAGCAGCCTATTCCCAAAAAGAAGCAGCAGGAGGAAGATCTGGAACTCCTGAAGAAGCCAAAAAGGAGCAGAGGTTTCGGAATGGGCATG", "points": [{"x":23.7111135539189,"y":0},{"x":23.7111135539189,"y":2},{"x":32.2701110256128,"y":2},{"x":32.6701110256128,"y":1},{"x":32.2701110256128,"y":0}]} ,{ "name": "sORF_5", "orfname": "sORF_5", "gene_start": 2978, "gene_end": 3091, "gene_strand": "-", "real_start": 6006, "real_end": 6119 , "real_strand": "+", "name": "sORF_5", "color": "#d5dce8", "yline": 10, "angle": -60, "xtext": 33.357150709025, "motifs": "RBS=CAGCGAAGCACAGAGTAT
", "function": "", "annotation":"", "protein":"LSRAKGKKYRTSEASTGDFLPFALDKYSVRSYLCAGKx", "dna":"TTGTCAAGGGCGAAGGGTAAAAAATACCGCACGAGCGAAGCGAGCACAGGAGATTTTTTACCCTTCGCCCTTGACAAATACTCTGTGCGGAGTTACCTTTGTGCCGGAAAATAG", "points": [{"x":32.7360668352204,"y":1},{"x":33.1360668352204,"y":2},{"x":33.9782345828295,"y":2},{"x":33.9782345828295,"y":0},{"x":33.1360668352204,"y":0}]} ,{ "name": "orf00012", "orfname": "orf00012", "gene_start": 3150, "gene_end": 3323, "gene_strand": "-", "real_start": 5774, "real_end": 5947 , "real_strand": "+", "name": "orf00012", "color": "#d5dce8", "yline": 10, "angle": -60, "xtext": 35.5776629658129, "motifs": "", "function": "", "annotation":"", "protein":"MKKKYLIFLVLSFCLFSSCSTMLEIITGNYKCAYPNCNERATENSVYCPYHKPYYLK", "dna":"ATGAAAAAAAAGTATCTTATTTTTTTAGTCCTAAGTTTCTGTTTGTTCTCGTCATGCTCAACAATGCTTGAAATAATAACAGGAAATTATAAATGCGCATACCCTAATTGTAATGAACGAGCAACAGAAAATTCAGTATATTGCCCATACCATAAGCCCTACTATCTTAAA", "points": [{"x":34.6268000439705,"y":1},{"x":35.0268000439705,"y":2},{"x":36.5285258876553,"y":2},{"x":36.5285258876553,"y":0},{"x":35.0268000439705,"y":0}]} ,{ "name": "100.3;BcpT", "orfname": "orf00013", "gene_start": 3380, "gene_end": 4879, "gene_strand": "-", "real_start": 4218, "real_end": 5717 , "real_strand": "+", "name": "100.3;BcpT", "color": "#70c947", "yline": 10, "angle": -60, "xtext": 45.3940859624052, "motifs": "", "function": "100.3;BcpT", "annotation":"Evalue=0.0 match=100.000%;", "protein":"MKKISYIICLTAILCSCNNELPIENVQELQTPKSKEDSEILSFKNSEEFLSTIENFDLDNPILTRASSSFVSAENIYEQENNENADNEYIGFLIPDEKYRNFFNKDLEIIINDTLYKATKYGTLFTHISNKSELIKSLENISEFKPLSNNTKQYGNIKLIDTYGLWDKETNNPITDDSFFENDEDDLLVENNGTETLTRSASDGGIPKSVVESFPTIGTADVNLIDKVIHFNPGYLGHTKLRFKSNSKRKLYISLYRNDYGFAVSIGLDCKVMKKLWHGMKWGHMKHWDDGIYYGVASLVVKQKIKNPSFDTVLDENRKEFLKKQWQEAIKHNNFTNASNSLTGGISNQWNPEYNHSKQENKFIIPYISVIDDFFGTTNISKKIEDALIRQGANFLKSYVNSHKTQSTQLVCISQREKTAYSLFRNDLSWNGGGYRVKETFLRYYRNIVFSIKIKGDKTTPGADLGDNDFVGKPEIVSCEAIVYTKDGDGWIGAKIEKK", "dna":"ATGAAAAAAATCAGTTATATCATCTGTTTAACAGCTATTTTGTGTTCATGTAACAATGAACTTCCTATTGAAAATGTACAAGAGCTACAGACTCCTAAATCAAAAGAAGATTCAGAAATTCTTAGTTTTAAAAATTCAGAAGAGTTCTTATCAACAATAGAAAACTTCGACTTGGATAATCCTATTTTAACAAGAGCAAGTTCATCTTTTGTTTCTGCGGAAAATATCTATGAACAGGAAAACAATGAAAATGCAGATAATGAATATATTGGTTTTCTTATTCCTGATGAAAAATATAGAAATTTTTTCAATAAAGATCTAGAAATAATTATCAATGATACTCTTTACAAAGCAACTAAATATGGTACACTATTTACTCATATTTCAAATAAATCAGAATTAATCAAATCTTTAGAAAATATTTCTGAATTCAAACCGTTATCCAATAATACGAAACAATATGGAAACATTAAACTTATAGACACTTACGGACTATGGGATAAAGAGACTAACAATCCTATTACAGATGATAGTTTTTTTGAAAATGACGAGGATGATTTATTAGTAGAAAACAATGGGACTGAAACTCTCACACGTTCCGCAAGCGATGGAGGTATACCTAAATCTGTCGTAGAATCATTCCCCACAATAGGAACAGCTGATGTAAACCTTATAGATAAGGTCATACACTTTAATCCGGGCTATCTAGGACATACGAAATTAAGATTTAAATCTAATTCAAAAAGAAAACTATATATTTCTCTATACAGAAATGACTATGGATTTGCAGTAAGTATTGGACTTGATTGTAAGGTCATGAAAAAGTTATGGCATGGTATGAAATGGGGACACATGAAACATTGGGATGATGGTATATACTATGGAGTTGCATCACTCGTTGTAAAACAAAAAATCAAGAATCCCAGTTTTGATACTGTACTAGATGAAAATAGAAAAGAGTTTCTAAAGAAACAATGGCAAGAAGCTATTAAGCACAATAATTTCACTAACGCTTCAAACAGTCTAACTGGAGGAATTTCAAATCAATGGAATCCTGAATATAACCATAGCAAACAAGAAAATAAATTCATTATTCCATATATTTCAGTTATAGATGATTTCTTTGGAACAACAAATATATCAAAGAAAATCGAAGATGCTCTTATACGTCAAGGAGCTAATTTCCTAAAAAGCTATGTTAATAGTCATAAAACACAAAGTACACAATTAGTTTGCATATCACAACGAGAGAAAACTGCATATTCTTTATTTAGAAATGATCTCTCTTGGAACGGGGGAGGATATAGAGTAAAAGAAACATTCCTTAGATATTATAGAAACATTGTATTTTCCATTAAAATCAAAGGAGATAAAACAACTCCAGGAGCAGATCTAGGAGACAATGATTTTGTTGGTAAGCCAGAAATTGTATCCTGTGAGGCTATTGTATATACCAAAGATGGTGATGGCTGGATTGGAGCAAAAATAGAAAAAAAA", "points": [{"x":37.1551060789271,"y":1},{"x":37.5551060789271,"y":2},{"x":53.6330658458833,"y":2},{"x":53.6330658458833,"y":0},{"x":37.5551060789271,"y":0}]} ,{ "name": "orf00014", "orfname": "orf00014", "gene_start": 4893, "gene_end": 5438, "gene_strand": "-", "real_start": 3659, "real_end": 4204 , "real_strand": "+", "name": "orf00014", "color": "#d5dce8", "yline": 10, "angle": -60, "xtext": 56.7824557546444, "motifs": "", "function": "", "annotation":"", "protein":"LFAIGVFANIFAQDTLSFKKTRDKNIYIEFLGASNLIGVSFDSRFTPISPWGYRIGISYFQGGDSFIKASNSNRGLFFPIEVNFLTSGNKHKLELGLGSNLGIYNEHISFIEESKEQYETISSTSNTTFGYYFFSNIGYRYISTKGFLFRIGLSPSFSFNDKHGITKEPFIYPYISFGYSF", "dna":"TTGTTTGCTATAGGTGTTTTTGCAAATATATTCGCACAGGACACCTTATCTTTCAAAAAGACGAGAGATAAAAATATCTATATAGAGTTTTTAGGAGCTTCTAACCTTATTGGAGTTTCTTTCGATTCAAGATTTACTCCTATATCCCCATGGGGATATAGGATTGGTATTTCTTATTTTCAAGGAGGGGATTCTTTTATTAAAGCATCTAACTCTAATAGAGGGCTATTTTTCCCTATTGAAGTAAACTTCCTCACCTCTGGAAATAAGCACAAATTAGAACTTGGATTAGGATCTAATCTTGGAATATATAACGAACACATTTCTTTTATAGAAGAATCAAAGGAACAATATGAAACAATAAGTTCCACTTCCAATACAACATTTGGATATTATTTCTTTTCTAATATAGGTTACCGTTACATATCAACTAAAGGTTTTCTATTTAGAATAGGATTAAGCCCTTCTTTTAGTTTTAATGATAAACACGGTATAACAAAAGAACCATTTATTTACCCTTATATTAGTTTTGGATATTCATTT", "points": [{"x":53.7869627349676,"y":1},{"x":54.1869627349676,"y":2},{"x":59.7779487743212,"y":2},{"x":59.7779487743212,"y":0},{"x":54.1869627349676,"y":0}]} ,{ "name": "orf00015", "orfname": "orf00015", "gene_start": 5438, "gene_end": 5608, "gene_strand": "+", "real_start": 3489, "real_end": 3659 , "real_strand": "-", "name": "orf00015", "color": "#d5dce8", "yline": 10, "angle": -60, "xtext": 60.7123227437617, "motifs": "", "function": "", "annotation":"", "protein":"MQVKNLFLSYNLLILNVAKLDLILQIAICKLFCEFVNLIYNYLIVKVHHKKKIVKV", "dna":"ATGCAAGTAAAAAACCTTTTTTTATCATATAATTTATTGATTTTGAACGTTGCAAAGTTAGACTTAATACTTCAAATCGCCATTTGTAAGCTTTTTTGTGAATTTGTAAACTTAATATATAACTATTTGATAGTTAAGGTGCATCACAAAAAAAAGATTGTAAAAGTA", "points": [{"x":59.7779487743212,"y":0},{"x":59.7779487743212,"y":2},{"x":61.2466967132022,"y":2},{"x":61.6466967132022,"y":1},{"x":61.2466967132022,"y":0}]} ,{ "name": "orf00016", "orfname": "orf00016", "gene_start": 5613, "gene_end": 7250, "gene_strand": "-", "real_start": 1847, "real_end": 3484 , "real_strand": "+", "name": "orf00016", "color": "#d5dce8", "yline": 10, "angle": -60, "xtext": 70.6991315818402, "motifs": "", "function": "", "annotation":"", "protein":"MKKQSIYFLVIIILLVQTSCQQNNEEEDFFNNQITLLENNPRLYLSKIDSTQVTNLNNSKEATHFLLVSLANYYVNNYYPPKEVLQKSIHIFTKKKLIQQQLESLLFLAKTYKKEKNLKMEVQAIEKAIDIASQIEDKEWLCCLYGYLGDMYIRKYNMLKFIKYQTLANQCIEDIAFRDMDISTQVQTAKSFLYIGNHKKSYELLNLIESSIDKNNIYYNEIKCLQGITLFKTKQWALCIEKLQEAIILSQTDDFLFVCHSILTYCYYSINDLANANKHRKLAIEYDTDSETNFAEIEFYKLCAEFARENNYIDNQIDYLYKAIERYEILLRNLNGSSLDEAIQAYTHFCDKKNYEKKLSTYKYAALSSLFIASIGLLIYINKKRKQAYQIVALHQQIETLEGLNNIKDEAKMFILRDFEIAKQIAMLRYTQKEQSAKFIKELNRFNITQNNSLLTTQWDNFYKHIDLSFDNFYTLLKDNFSDLNEKELQLCCMMVAGFKTEEIAAIWMQSIFSVHKYKTNIRKKLKTPEGANIIAFLRSALPFQ", "dna":"ATGAAAAAACAATCTATATATTTTTTAGTTATCATCATTTTGTTAGTACAGACATCTTGCCAACAAAACAATGAGGAAGAAGACTTTTTTAATAATCAAATAACACTCTTAGAAAATAATCCTCGATTATATCTTTCTAAAATTGATTCAACCCAAGTCACTAATCTTAATAACTCAAAAGAAGCAACTCATTTCTTATTAGTTTCATTAGCCAACTACTATGTAAATAATTACTACCCACCCAAAGAAGTATTACAAAAAAGTATTCATATTTTCACAAAAAAGAAACTAATTCAACAACAACTTGAATCCCTTTTGTTTCTTGCCAAAACATACAAAAAAGAAAAAAACTTAAAAATGGAGGTGCAAGCTATAGAAAAAGCTATAGATATAGCAAGCCAAATAGAGGATAAAGAATGGCTATGTTGTCTATATGGCTATCTAGGAGATATGTATATCCGCAAATACAACATGTTGAAATTTATCAAATATCAAACATTAGCTAACCAGTGTATTGAAGATATTGCATTTAGGGATATGGATATATCAACTCAAGTACAAACGGCAAAAAGTTTTTTATATATAGGAAATCATAAAAAGTCCTACGAGCTATTGAATTTAATAGAAAGCTCCATTGATAAAAACAACATTTATTATAATGAGATAAAATGCCTACAAGGTATTACGCTATTTAAGACTAAACAATGGGCACTATGTATCGAAAAATTACAGGAAGCTATAATATTAAGCCAAACAGATGATTTTTTGTTTGTCTGCCATTCTATACTAACTTATTGCTATTACTCCATAAATGATTTAGCAAATGCTAATAAACATAGAAAATTAGCTATAGAATATGATACAGATTCGGAAACCAATTTTGCTGAAATAGAATTTTATAAACTGTGTGCAGAATTTGCTAGAGAAAATAATTATATAGACAATCAAATTGATTACCTGTATAAGGCAATAGAACGATATGAAATTCTTCTAAGGAACTTGAATGGAAGTTCTTTAGATGAAGCTATTCAAGCATATACTCACTTTTGCGATAAAAAAAATTATGAAAAGAAATTATCTACATACAAATATGCTGCTTTAAGTTCTCTTTTTATAGCAAGCATAGGGCTATTAATCTACATCAATAAAAAAAGAAAACAAGCTTACCAAATTGTGGCTCTTCACCAACAAATAGAAACATTGGAAGGCTTAAATAATATAAAAGATGAAGCAAAAATGTTCATCTTACGTGATTTTGAAATAGCCAAACAAATTGCAATGTTGAGATATACGCAAAAAGAACAAAGTGCTAAATTTATAAAAGAATTAAACAGATTCAATATTACACAAAATAATTCTTTACTAACTACGCAATGGGACAATTTTTATAAACACATTGATTTATCTTTTGATAATTTTTATACACTGCTGAAAGATAACTTTTCAGATCTAAATGAAAAAGAACTACAACTTTGCTGTATGATGGTTGCAGGGTTCAAGACAGAAGAAATTGCAGCTATATGGATGCAAAGTATTTTTTCTGTACACAAATATAAAACCAATATCCGAAAGAAACTTAAAACTCCTGAAGGTGCTAATATAATAGCTTTTTTAAGGTCTGCTCTTCCATTCCAA", "points": [{"x":61.7016598878751,"y":1},{"x":62.1016598878751,"y":2},{"x":79.6966032758052,"y":2},{"x":79.6966032758052,"y":0},{"x":62.1016598878751,"y":0}]} ,{ "name": "orf00018", "orfname": "orf00018", "gene_start": 7271, "gene_end": 7792, "gene_strand": "-", "real_start": 1305, "real_end": 1826 , "real_strand": "+", "name": "orf00018", "color": "#d5dce8", "yline": 10, "angle": -60, "xtext": 82.7910300098934, "motifs": "", "function": "", "annotation":"", "protein":"MEKGQESKQKRKTPLTTIAISQEYAQKLDEYLNGTGITRKEFVELSVDYFQRTGFDLRGEAFDLSPLEKVAGRLEQSAKIMEQHNEGTEAVRQLLLAVREQTAKQLPAPELIAHAAEEKAKAEAKNEEQEREITRLRSENSALLEYKKKAHRELCRVRDEQKIFGKIHVKTEL", "dna":"ATGGAAAAAGGACAGGAAAGCAAGCAAAAGAGGAAAACACCGCTTACCACCATAGCGATAAGCCAAGAGTACGCCCAAAAATTAGACGAGTATTTAAACGGTACGGGTATAACTCGCAAAGAATTTGTCGAGTTGTCCGTTGATTATTTCCAAAGAACTGGATTCGACCTTCGAGGTGAAGCATTTGACCTCTCCCCATTAGAAAAGGTTGCCGGGCGGCTGGAACAATCTGCAAAGATCATGGAACAGCACAACGAGGGAACAGAAGCGGTACGCCAGCTATTGCTAGCAGTCCGGGAACAGACCGCTAAACAGCTTCCGGCACCAGAACTGATTGCCCATGCTGCCGAAGAAAAAGCAAAGGCAGAAGCCAAAAACGAAGAACAAGAAAGGGAGATTACCCGGTTACGCTCTGAGAACTCTGCTTTGCTAGAATATAAGAAAAAGGCACATCGAGAACTGTGTCGGGTACGTGACGAACAAAAAATTTTCGGAAAAATACATGTAAAAACTGAGTTG", "points": [{"x":79.9274486094317,"y":1},{"x":80.3274486094317,"y":2},{"x":85.6546114103551,"y":2},{"x":85.6546114103551,"y":0},{"x":80.3274486094317,"y":0}]} ,{ "name": "sORF_4", "orfname": "sORF_4", "gene_start": 7770, "gene_end": 7865, "gene_strand": "+", "real_start": 1232, "real_end": 1327 , "real_strand": "-", "name": "sORF_4", "color": "#d5dce8", "yline": 10, "angle": -60, "xtext": 85.9349236011872, "motifs": "RBS=CTTTTGC
", "function": "", "annotation":"", "protein":"LLSCPFSIAVNAIFCYKGSYKFYYCNLLHVLx", "dna":"TTGCTTTCCTGTCCTTTTTCCATTGCTGTAAATGCTATATTTTGTTACAAAGGTAGTTATAAGTTTTATTATTGCAATTTATTACATGTGTTATAG", "points": [{"x":85.412773441794,"y":0},{"x":85.412773441794,"y":2},{"x":86.0570737605804,"y":2},{"x":86.4570737605804,"y":1},{"x":86.0570737605804,"y":0}]} ,{ "name": "orf00020", "orfname": "orf00020", "gene_start": 7894, "gene_end": 8085, "gene_strand": "-", "real_start": 1012, "real_end": 1203 , "real_strand": "+", "name": "orf00020", "color": "#d5dce8", "yline": 10, "angle": -60, "xtext": 87.8256568099373, "motifs": "", "function": "", "annotation":"", "protein":"MKTGDKVIVPAEINGYGRDLQAMVTEIEKFAGTIFVTVVFTEPCPEAYGRKGGVYHDFQLITE", "dna":"ATGAAAACAGGTGATAAAGTTATCGTGCCAGCCGAAATTAACGGCTATGGCAGGGATTTACAGGCAATGGTTACAGAGATAGAGAAGTTTGCTGGGACAATATTCGTAACAGTGGTATTCACCGAACCATGTCCGGAAGCCTACGGAAGAAAAGGAGGCGTTTACCATGACTTCCAGCTAATAACAGAG", "points": [{"x":86.7758601736836,"y":1},{"x":87.1758601736836,"y":2},{"x":88.875453446191,"y":2},{"x":88.875453446191,"y":0},{"x":87.1758601736836,"y":0}]} ,{ "name": "orf00022", "orfname": "orf00022", "gene_start": 8099, "gene_end": 9076, "gene_strand": "-", "real_start": 21, "real_end": 998 , "real_strand": "+", "name": "orf00022", "color": "#8fbcb9", "yline": 10, "angle": -60, "xtext": 94.3992525008244, "motifs": "", "function": "Replication protein OS=Neisseria gonorrhoeae OX=485 PE=3 SV=1", "annotation":"Species='-'
match=26.718%|Evalue=1.59e-16
UniRef:sp|P17492|REPA_NEIGO", "protein":"MAKKDQKKRDIILSQDNALTTARYKFDLIEKRALYCIIRNIRANYIEQEDGQRTLFENLIITIKEEELQKCGDNTKMKNIYDALKRLRNRDIEINNEKMWLSIGFVNYVKHIKNKSYFEVEVSKEVLPYYVELAQNFTSYSMTVAIALKSTFTQRFYELCCQYQNKGFFFYAVNELREMFMLENKYPRSFDFKKWVLETPAKELKNLYDAGQCDLYFDFDIREKKGKEALSYNFFIHSRQTEQQKLLEYESAKQAIIYITTTISRFSKSDKGYVKRVVNAVQLHPEIAVQVAQKIQKKFEQYIDKPAKQIGAIIRVCLMEDFGIE", "dna":"ATGGCAAAGAAAGACCAAAAGAAACGAGATATTATCTTATCTCAAGATAATGCACTCACAACTGCCCGTTATAAGTTCGACCTTATCGAAAAGCGTGCGTTATATTGCATCATTCGCAATATACGGGCAAACTATATCGAACAAGAGGACGGACAAAGAACTTTGTTTGAAAATCTTATAATCACAATCAAAGAGGAAGAACTTCAAAAATGTGGTGATAATACTAAAATGAAGAATATCTATGATGCGCTAAAGCGGCTTAGAAATCGTGATATAGAGATTAATAACGAAAAGATGTGGCTGAGTATCGGTTTTGTCAATTACGTTAAGCATATCAAAAATAAATCATATTTTGAAGTGGAAGTATCCAAAGAGGTACTACCCTATTACGTGGAACTCGCCCAAAACTTCACGAGTTACTCCATGACAGTAGCAATCGCACTCAAAAGCACATTTACCCAACGTTTCTATGAACTATGCTGCCAATATCAAAATAAAGGTTTCTTTTTCTATGCTGTCAATGAGCTACGGGAAATGTTCATGTTGGAAAACAAATATCCACGTTCTTTCGATTTTAAAAAATGGGTACTTGAAACGCCAGCTAAAGAATTAAAAAACCTATATGATGCCGGACAATGTGATTTATACTTCGATTTCGACATAAGGGAAAAGAAAGGTAAAGAAGCACTCTCTTATAACTTTTTCATACACAGCCGTCAAACCGAACAACAAAAGCTATTGGAATACGAAAGTGCCAAACAAGCGATCATCTACATAACAACCACTATTTCGAGATTCTCTAAAAGTGACAAAGGATATGTTAAACGTGTAGTGAACGCTGTACAGTTACACCCGGAAATAGCCGTACAGGTGGCGCAAAAAATACAAAAGAAGTTTGAGCAATATATAGACAAGCCAGCCAAACAAATAGGAGCTATCATCCGGGTTTGCTTAATGGAAGATTTTGGTATAGAA", "points": [{"x":89.0293503352754,"y":1},{"x":89.4293503352754,"y":2},{"x":99.7691546663735,"y":2},{"x":99.7691546663735,"y":0},{"x":89.4293503352754,"y":0}]} ]}