1 perform kraken2: 01.kraken2.sh

On NGS:
https://telatin.github.io/microbiome-bioinformatics/Kraken-to-Krona/
ktImportTaxonomy -t 5 -m 3 -o Bd1.html Bd1.report

ktImportTaxonomy -t 5 -m 3 -o Cm.html /data/PROJECTS/Primbio/kraken2/Cm*.report 
ktImportTaxonomy -t 5 -m 3 -o Dg.html /data/PROJECTS/Primbio/kraken2/Dg*.report 
ktImportTaxonomy -t 5 -m 3 -o Fx.html /data/PROJECTS/Primbio/kraken2/Fx*.report 
ktImportTaxonomy -t 5 -m 3 -o Po.html /data/PROJECTS/Primbio/kraken2/Po*.report 
ktImportTaxonomy -t 5 -m 3 -o Ra.html /data/PROJECTS/Primbio/kraken2/Ra*.report 
ktImportTaxonomy -t 5 -m 3 -o Sk.html /data/PROJECTS/Primbio/kraken2/Sk*.report 
ktImportTaxonomy -t 5 -m 3 -o Wc.html /data/PROJECTS/Primbio/kraken2/Wc*.report