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"value":2 }, { "key": "PF01546:Peptidase family M20/M25/M40", "experiment": "NO3_3-NO", "class": "Pfam", "class_id": "PF01546", "description": "Peptidase family M20/M25/M40", "genes": "VC_1343;VC_A0180", "url": "http://pfam.xfam.org/family/PF01546", "value":2 }, { "key": "SSF88659:Sigma3 and sigma4 domains of RNA polymerase sigma factors", "experiment": "NO-none", "class": "SUPERFAMILY", "class_id": "SSF88659", "description": "Sigma3 and sigma4 domains of RNA polymerase sigma factors", "genes": "VC_0534;VC_2302", "url": "http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF88659", "value":2 }, { "key": "operon_1009:AE003852.1|gene834|VC_0772", "experiment": "NO3-NO", "class": "operons", "class_id": "operon_1009", "description": "AE003852.1|gene834|VC_0772", "genes": "VC_0772;VC_0773", "url": "http://genome2d.molgenrug.nl/index.php/show-operon?operonname=operon_1009", "value":2 }, { "key": "operon_1009:AE003852.1|gene834|VC_0772", "experiment": "NO3-none", "class": 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"IPR010432:RDD", "experiment": "NO3-none", "class": "IPR", "class_id": "IPR010432", "description": "RDD", "genes": "VC_0842;VC_2498", "url": "http://www.ebi.ac.uk/interpro/entry/IPR010432", "value":2 }, { "key": "IPR002178:PTS EIIA type-2 domain", "experiment": "NO-none", "class": "IPR", "class_id": "IPR002178", "description": "PTS EIIA type-2 domain", "genes": "VC_A0245;VC_A0518", "url": "http://www.ebi.ac.uk/interpro/entry/IPR002178", "value":2 }, { "key": "IPR002178:PTS EIIA type-2 domain", "experiment": "NO3-none", "class": "IPR", "class_id": "IPR002178", "description": "PTS EIIA type-2 domain", "genes": "VC_1824;VC_A0245", "url": "http://www.ebi.ac.uk/interpro/entry/IPR002178", "value":2 }, { "key": "IPR002178:PTS EIIA type-2 domain", "experiment": "NO3_low-NO", "class": "IPR", "class_id": "IPR002178", "description": "PTS EIIA type-2 domain", "genes": "VC_A0245;VC_A0518", "url": "http://www.ebi.ac.uk/interpro/entry/IPR002178", "value":2 }, { "key": "GO:0030694:bacterial-type 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"operon_0493:AE003853.1|gene3782|VC_A0891", "experiment": "NO3_3-none", "class": "operons", "class_id": "operon_0493", "description": "AE003853.1|gene3782|VC_A0891", "genes": "VC_A0891;VC_A0892", "url": "http://genome2d.molgenrug.nl/index.php/show-operon?operonname=operon_0493", "value":2 }, { "key": "SSF46626:Cytochrome c", "experiment": "NO3_3-none", "class": "SUPERFAMILY", "class_id": "SSF46626", "description": "Cytochrome c", "genes": "VC_0089;VC_2241", "url": "http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF46626", "value":2 }, { "key": "SSF46626:Cytochrome c", "experiment": "NO3_low-NO", "class": "SUPERFAMILY", "class_id": "SSF46626", "description": "Cytochrome c", "genes": "VC_0575;VC_1439;VC_A0766", "url": "http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF46626", "value":3 }, { "key": "IPR039261:VC_0312", "experiment": "NO-none", "class": "IPR", "class_id": "IPR039261", "description": "VC_0312", "genes": "VC_2210;VC_A0183", "url": "http://www.ebi.ac.uk/interpro/entry/IPR039261", "value":2 }, { "key": "IPR039261:VC_0312", "experiment": "NO3-none", "class": "IPR", "class_id": "IPR039261", "description": "VC_0312", "genes": "VC_2210;VC_A0183", "url": "http://www.ebi.ac.uk/interpro/entry/IPR039261", "value":2 }, { "key": "IPR039261:VC_0312", "experiment": "NO3_3-none", "class": "IPR", "class_id": "IPR039261", "description": "VC_0312", "genes": "VC_0384;VC_A0183", "url": "http://www.ebi.ac.uk/interpro/entry/IPR039261", "value":2 }, { "key": "IPR039261:VC_0312", "experiment": "NO3_low-NO", "class": "IPR", "class_id": "IPR039261", "description": "VC_0312", "genes": "VC_2210;VC_A0151", "url": "http://www.ebi.ac.uk/interpro/entry/IPR039261", "value":2 }, { "key": "IPR039261:VC_0312", "experiment": "NO3_low-none", "class": "IPR", "class_id": "IPR039261", "description": "VC_0312", "genes": "VC_A0151;VC_A0183", "url": "http://www.ebi.ac.uk/interpro/entry/IPR039261", "value":2 }, { "key": "KEGG:00405:VC_1173", "experiment": 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histidine kinase-related protein, C-terminal", "experiment": "NO3_3-NO", "class": "IPR", "class_id": "IPR004358", "description": "Signal transduction histidine kinase-related protein, C-terminal", "genes": "VC_1084;VC_1088;VC_A0211;VC_A0719;VC_A1095", "url": "http://www.ebi.ac.uk/interpro/entry/IPR004358", "value":5 }, { "key": "PF03264:NapC/NirT cytochrome c family, N-terminal region", "experiment": "NO-none", "class": "Pfam", "class_id": "PF03264", "description": "NapC/NirT cytochrome c family, N-terminal region", "genes": "VC_1693;VC_1951", "url": "http://pfam.xfam.org/family/PF03264", "value":2 }, { "key": "PF03264:NapC/NirT cytochrome c family, N-terminal region", "experiment": "NO3_3-none", "class": "Pfam", "class_id": "PF03264", "description": "NapC/NirT cytochrome c family, N-terminal region", "genes": "VC_1951;VC_A0680", "url": "http://pfam.xfam.org/family/PF03264", "value":2 }, { "key": "PF03264:NapC/NirT cytochrome c family, N-terminal region", "experiment": "NO3_low-none", 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