ID CLASS_ID Description VC_0005 PF01809 VC_0005 VC_0010 PF00497 Bacterial extracellular solute-binding proteins, family 3 VC_0040 PF03006 VC_0040 VC_0069 PF07690 Major Facilitator Superfamily VC_0091 PF04072 Leucine carboxyl methyltransferase VC_0136 PF01810 VC_0136 VC_0139 PF00210 Ferritin-like domain VC_0217 PF04002 RadC-like JAB domain VC_0218 PF00830 Ribosomal L28 family VC_0280 PF13520 Amino acid permease VC_0281 PF01276 Orn/Lys/Arg decarboxylase, major domain VC_0281 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VC_0281 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VC_0324 PF00298 Ribosomal protein L11, RNA binding domain VC_0324 PF03946 Ribosomal protein L11, N-terminal domain VC_0337 PF00892 EamA-like transporter family VC_0359 PF00164 Ribosomal protein S12/S23 VC_0426 PF09834 VC_0426 VC_0474 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC_0474 PF03466 LysR substrate binding domain VC_0475 PF00593 TonB dependent receptor VC_0475 PF07715 TonB-dependent Receptor Plug Domain VC_0508 PF10980 Protein of unknown function (DUF2787) VC_0520 PF01165 Ribosomal protein S21 VC_0574 PF00032 Cytochrome b(C-terminal)/b6/petD VC_0574 PF00033 Cytochrome b(N-terminal)/b6/petB VC_0575 PF02167 Cytochrome C1 family VC_0576 PF00043 Glutathione S-transferase, C-terminal domain VC_0576 PF13417 Glutathione S-transferase, N-terminal domain VC_0577 PF04386 Stringent starvation protein B VC_0635 PF01985 CRS1 / YhbY (CRM) domain VC_0641 PF17384 VC_0641 VC_0641 PF02576 Uncharacterised BCR, YhbC family COG0779 VC_0704 PF13416 Bacterial extracellular solute-binding protein VC_0716 PF00037 4Fe-4S binding domain VC_0717 PF16325 VC_0717 VC_0717 PF01136 VC_0717 VC_0718 PF04381 Putative exonuclease, RdgC VC_0731 PF00578 AhpC/TSA family VC_0731 PF10417 C-terminal domain of 1-Cys peroxiredoxin VC_0767 PF00571 CBS domain VC_0767 PF00478 IMP dehydrogenase / GMP reductase domain VC_0768 PF00117 Glutamine amidotransferase class-I VC_0768 PF02540 NAD synthase VC_0768 PF00958 GMP synthase C terminal domain VC_0771 PF00857 Isochorismatase family VC_0771 PF00550 Phosphopantetheine attachment site VC_0772 PF13193 AMP-binding enzyme C-terminal domain VC_0772 PF00501 AMP-binding enzyme VC_0773 PF00425 chorismate binding enzyme VC_0774 PF13561 Enoyl-(Acyl carrier protein) reductase VC_0775 PF00668 Condensation domain VC_0776 PF01497 Periplasmic binding protein VC_0777 PF01032 FecCD transport family VC_0778 PF01032 FecCD transport family VC_0779 PF00005 ABC transporter VC_0819 PF00171 Aldehyde dehydrogenase family VC_0820 PF00041 Fibronectin type III domain VC_0820 PF10462 Peptidase M66 VC_0820 PF12561 VC_0820 VC_0824 PF08534 Redoxin VC_0828 PF05946 Toxin-coregulated pilus subunit TcpA VC_0828 PF07963 Prokaryotic N-terminal methylation motif VC_0837 PF06340 Vibrio cholerae toxin co-regulated pilus biosynthesis protein F VC_0844 PF13505 Outer membrane protein beta-barrel domain VC_0851 PF04355 SmpA / OmlA family VC_0897 PF04241 VC_0897 VC_0911 PF00128 Alpha amylase, catalytic domain VC_0936 PF10531 SLBB domain VC_0936 PF02563 Polysaccharide biosynthesis/export protein VC_0939 PF04892 VC_0939 VC_0988 PF00854 POT family VC_1009 PF10952 VC_1009 VC_1015 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VC_1015 PF13375 RnfC Barrel sandwich hybrid domain VC_1015 PF10531 SLBB domain VC_1015 PF12838 4Fe-4S dicluster domain VC_1024 PF06463 Molybdenum Cofactor Synthesis C VC_1024 PF13353 4Fe-4S single cluster domain VC_1024 PF04055 Radical SAM superfamily VC_1025 PF00994 Probable molybdopterin binding domain VC_1026 PF01967 MoaC family VC_1028 PF02391 MoaE protein VC_1040 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP VC_1040 PF12557 Cob(I)alamin adenosyltransferase N terminal VC_1042 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VC_1118 PF12680 SnoaL-like domain VC_1119 PF00106 short chain dehydrogenase VC_1120 PF01593 Flavin containing amine oxidoreductase VC_1130 PF00816 H-NS histone family VC_1134 PF00155 Aminotransferase class I and II VC_1142 PF00313 'Cold-shock' DNA-binding domain VC_1173 PF00117 Glutamine amidotransferase class-I VC_1174 PF00425 chorismate binding enzyme VC_1174 PF04715 Anthranilate synthase component I, N terminal region VC_1176 PF08056 VC_1176 VC_1229 PF03547 VC_1229 VC_1231 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region VC_1231 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VC_1235 PF00375 Sodium:dicarboxylate symporter family VC_1254 PF00111 2Fe-2S iron-sulfur cluster binding domain VC_1255 PF00268 Ribonucleotide reductase, small chain VC_1256 PF03477 ATP cone domain VC_1256 PF02867 Ribonucleotide reductase, barrel domain VC_1256 PF00317 Ribonucleotide reductase, all-alpha domain VC_1271 PF11201 VC_1271 VC_1280 PF01522 Polysaccharide deacetylase VC_1281 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VC_1384 PF13505 Outer membrane protein beta-barrel domain VC_1389 PF10013 VC_1389 VC_1398 PF00072 Response regulator receiver domain VC_1408 PF14246 AefR-like transcriptional repressor, C-terminal region VC_1408 PF00440 Bacterial regulatory proteins, tetR family VC_1415 PF05638 Protein of unknown function (DUF796) VC_1439 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP VC_1439 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VC_1457 PF01375 Heat-labile enterotoxin alpha chain VC_1491 PF01180 Dihydroorotate dehydrogenase VC_1511 PF01292 Prokaryotic cytochrome b561 VC_1512 PF13247 4Fe-4S dicluster domain VC_1514 PF10518 TAT (twin-arginine translocation) pathway signal sequence VC_1515 PF02613 Nitrate reductase delta subunit VC_1516 PF00037 4Fe-4S binding domain VC_1516 PF12838 4Fe-4S dicluster domain VC_1516 PF12837 4Fe-4S binding domain VC_1517 PF11748 VC_1517 VC_1518 PF11749 VC_1518 VC_1524 PF00528 Binding-protein-dependent transport system inner membrane component VC_1546 PF01618 VC_1546 VC_1547 PF01618 VC_1547 VC_1548 PF11932 VC_1548 VC_1560 PF00141 Peroxidase VC_1566 PF12704 MacB-like periplasmic core domain VC_1566 PF02687 VC_1566 VC_1570 PF02322 VC_1570 VC_1571 PF01654 VC_1571 VC_1573 PF00206 Lyase VC_1573 PF10415 Fumarase C C-terminus VC_1589 PF03306 Alpha-acetolactate decarboxylase VC_1592 PF00563 EAL domain VC_1619 PF07209 VC_1619 VC_1659 PF13437 HlyD family secretion protein VC_1664 PF13416 Bacterial extracellular solute-binding protein VC_1665 PF00528 Binding-protein-dependent transport system inner membrane component VC_1666 PF00005 ABC transporter VC_1667 PF01066 CDP-alcohol phosphatidyltransferase VC_1688 PF11449 VC_1688 VC_1694 PF06796 VC_1694 VC_1695 PF01226 Formate/nitrite transporter VC_1696 PF06146 VC_1696 VC_1720 PF02613 Nitrate reductase delta subunit VC_1723 PF09335 VC_1723 VC_1724 PF09413 Domain of unknown function (DUF2007) VC_1772 PF13280 VC_1772 VC_1786 PF04002 RadC-like JAB domain VC_1812 PF04134 VC_1812 VC_1814 PF00875 DNA photolyase VC_1814 PF03441 FAD binding domain of DNA photolyase VC_1815 PF00106 short chain dehydrogenase VC_1834 PF13174 Tetratricopeptide repeat VC_1834 PF13432 Tetratricopeptide repeat VC_1834 PF16331 VC_1834 VC_1869 PF13353 4Fe-4S single cluster domain VC_1869 PF04055 Radical SAM superfamily VC_1875 PF02348 Cytidylyltransferase VC_1900 PF07840 FadR C-terminal domain VC_1900 PF00392 Bacterial regulatory proteins, gntR family VC_1915 PF00575 S1 RNA binding domain VC_1993 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VC_1993 PF07992 Pyridine nucleotide-disulphide oxidoreductase VC_2004 PF04187 Protein of unknown function, DUF399 VC_2045 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VC_2045 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VC_2051 PF08534 Redoxin VC_2053 PF03100 CcmE VC_2059 PF01584 CheW-like domain VC_2061 PF13614 AAA domain VC_2105 PF14539 Domain of unknown function (DUF4442) VC_2121 PF01311 VC_2121 VC_2128 PF02120 Flagellar hook-length control protein FliK VC_2129 PF02050 Flagellar FliJ protein VC_2171 PF00860 Permease family VC_2175 PF00793 DAHP synthetase I family VC_2176 PF13369 VC_2176 VC_2176 PF13371 Tetratricopeptide repeat VC_2177 PF04247 VC_2177 VC_2190 PF00700 Bacterial flagellin C-terminal helical region VC_2190 PF00669 Bacterial flagellin N-terminal helical region VC_2191 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VC_2192 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VC_2192 PF10135 VC_2192 VC_2193 PF02119 VC_2193 VC_2198 PF13860 FlgD Ig-like domain VC_2198 PF03963 VC_2198 VC_2198 PF13861 FlgD Tudor-like domain VC_2199 PF00460 Flagella basal body rod protein VC_2199 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VC_2208 PF16538 VC_2208 VC_2208 PF16548 VC_2208 VC_2208 PF16539 VC_2208 VC_2210 PF08021 Siderophore-interacting FAD-binding domain VC_2210 PF04954 Siderophore-interacting protein VC_2211 PF07715 TonB-dependent Receptor Plug Domain VC_2215 PF00403 Heavy-metal-associated domain VC_2215 PF00122 E1-E2 ATPase VC_2215 PF00702 haloacid dehalogenase-like hydrolase VC_2216 PF04214 VC_2216 VC_2283 PF00209 Sodium:neurotransmitter symporter family VC_2361 PF01228 Glycine radical VC_2378 PF07386 VC_2378 VC_2401 PF04101 Glycosyltransferase family 28 C-terminal domain VC_2401 PF03033 Glycosyltransferase family 28 N-terminal domain VC_2473 PF06526 Protein of unknown function (DUF1107) VC_2508 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VC_2508 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VC_2560 PF01507 Phosphoadenosine phosphosulfate reductase family VC_2561 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VC_2578 PF00327 Ribosomal protein L30p/L7e VC_2583 PF00253 Ribosomal protein S14p/S29e VC_2597 PF00338 Ribosomal protein S10p/S20e VC_2619 PF00117 Glutamine amidotransferase class-I VC_2637 PF08534 Redoxin VC_2637 PF00462 Glutaredoxin VC_2647 PF10400 Virulence activator alpha C-term VC_2647 PF03551 Transcriptional regulator PadR-like family VC_2658 PF02300 Fumarate reductase subunit C VC_2666 PF13412 Winged helix-turn-helix DNA-binding VC_2667 PF11333 VC_2667 VC_2679 PF01197 Ribosomal protein L31 VC_2691 PF07813 LTXXQ motif family protein VC_2694 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VC_2694 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VC_2695 PF00588 SpoU rRNA Methylase family VC_2728 PF02501 Type II secretion system (T2SS), protein I VC_2728 PF07963 Prokaryotic N-terminal methylation motif VC_2758 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VC_2758 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VC_2758 PF00378 Enoyl-CoA hydratase/isomerase family VC_A0008 PF17200 VC_A0008 VC_A0008 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC_A0010 PF10928 Protein of unknown function (DUF2810) VC_A0017 PF05638 Protein of unknown function (DUF796) VC_A0023 PF01757 VC_A0023 VC_A0063 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VC_A0063 PF00326 Prolyl oligopeptidase family VC_A0065 PF01483 Proprotein convertase P-domain VC_A0068 PF00672 HAMP domain VC_A0068 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC_A0083 PF07690 Major Facilitator Superfamily VC_A0109 PF04965 Gene 25-like lysozyme VC_A0111 PF06996 VC_A0111 VC_A0151 PF08022 VC_A0151 VC_A0151 PF01794 VC_A0151 VC_A0166 PF00313 'Cold-shock' DNA-binding domain VC_A0184 PF00313 'Cold-shock' DNA-binding domain VC_A0195 PF13505 Outer membrane protein beta-barrel domain VC_A0227 PF01497 Periplasmic binding protein VC_A0228 PF01032 FecCD transport family VC_A0229 PF01032 FecCD transport family VC_A0230 PF00005 ABC transporter VC_A0231 PF12833 Helix-turn-helix domain VC_A0233 PF09981 Uncharacterized protein conserved in bacteria (DUF2218) VC_A0244 PF00596 Class II Aldolase and Adducin N-terminal domain VC_A0245 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VC_A0246 PF03611 VC_A0246 VC_A0246 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VC_A0249 PF01292 Prokaryotic cytochrome b561 VC_A0263 PF13508 Acetyltransferase (GNAT) domain VC_A0384 PF04875 VC_A0384 VC_A0391 PF05015 Plasmid maintenance system killer protein VC_A0393 PF04875 VC_A0393 VC_A0412 PF04875 VC_A0412 VC_A0423 PF05016 Plasmid stabilisation system protein VC_A0477 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system VC_A0503 PF05016 Plasmid stabilisation system protein VC_A0516 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VC_A0516 PF02378 Phosphotransferase system, EIIC VC_A0517 PF00294 pfkB family carbohydrate kinase VC_A0518 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VC_A0518 PF00381 PTS HPr component phosphorylation site VC_A0524 PF03595 Voltage-dependent anion channel VC_A0540 PF00571 CBS domain VC_A0540 PF01226 Formate/nitrite transporter VC_A0542 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC_A0542 PF03466 LysR substrate binding domain VC_A0543 PF06496 VC_A0543 VC_A0576 PF00593 TonB dependent receptor VC_A0576 PF07715 TonB-dependent Receptor Plug Domain VC_A0584 PF00043 Glutathione S-transferase, C-terminal domain VC_A0584 PF02798 Glutathione S-transferase, N-terminal domain VC_A0615 PF01641 SelR domain VC_A0615 PF01625 Peptide methionine sulfoxide reductase VC_A0636 PF03992 Antibiotic biosynthesis monooxygenase VC_A0643 PF11127 Protein of unknown function (DUF2892) VC_A0646 PF01553 Acyltransferase VC_A0646 PF13444 Acetyltransferase (GNAT) domain VC_A0647 PF04945 YHS domain VC_A0648 PF05742 VC_A0648 VC_A0651 PF09335 VC_A0651 VC_A0655 PF08244 Glycosyl hydrolases family 32 C terminal VC_A0655 PF00251 Glycosyl hydrolases family 32 N-terminal domain VC_A0663 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC_A0676 PF12838 4Fe-4S dicluster domain VC_A0677 PF03927 NapD protein VC_A0678 PF00384 Molybdopterin oxidoreductase VC_A0678 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VC_A0678 PF01568 Molydopterin dinucleotide binding domain VC_A0679 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) VC_A0680 PF03264 NapC/NirT cytochrome c family, N-terminal region VC_A0685 PF13343 Bacterial extracellular solute-binding protein VC_A0687 PF08402 TOBE domain VC_A0687 PF00005 ABC transporter VC_A0703 PF07947 VC_A0703 VC_A0723 PF00368 Hydroxymethylglutaryl-coenzyme A reductase VC_A0757 PF00528 Binding-protein-dependent transport system inner membrane component VC_A0759 PF00497 Bacterial extracellular solute-binding proteins, family 3 VC_A0766 PF00034 Cytochrome c VC_A0782 PF00005 ABC transporter VC_A0833 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC_A0833 PF03466 LysR substrate binding domain VC_A0843 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VC_A0843 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VC_A0897 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VC_A0905 PF05651 VC_A0905 VC_A0905 PF13556 PucR C-terminal helix-turn-helix domain VC_A0919 PF04175 Protein of unknown function (DUF406) VC_A0943 PF00528 Binding-protein-dependent transport system inner membrane component VC_A0977 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VC_A0977 PF00005 ABC transporter VC_A0979 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC_A0998 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VC_A1058 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC_A1058 PF03466 LysR substrate binding domain VC_A1078 PF00196 Bacterial regulatory proteins, luxR family VC_A1078 PF08448 PAS fold