The following have been reloaded with a version change:
  1) GCC/11.3.0 => GCC/12.2.0
  2) GCCcore/11.3.0 => GCCcore/12.2.0
  3) XZ/5.2.5-GCCcore-11.3.0 => XZ/5.2.7-GCCcore-12.2.0
  4) binutils/2.38-GCCcore-11.3.0 => binutils/2.39-GCCcore-12.2.0
  5) bzip2/1.0.8-GCCcore-11.3.0 => bzip2/1.0.8-GCCcore-12.2.0
  6) ncurses/6.3-GCCcore-11.3.0 => ncurses/6.3-GCCcore-12.2.0
  7) zlib/1.2.12-GCCcore-11.3.0 => zlib/1.2.12-GCCcore-12.2.0


The following have been reloaded with a version change:
  1) GCC/12.2.0 => GCC/11.3.0
  2) GCCcore/12.2.0 => GCCcore/11.3.0
  3) binutils/2.39-GCCcore-12.2.0 => binutils/2.38-GCCcore-11.3.0
  4) zlib/1.2.12-GCCcore-12.2.0 => zlib/1.2.12-GCCcore-11.3.0


The following have been reloaded with a version change:
  1) FFTW/3.3.10-GCC-12.2.0 => FFTW/3.3.10-gompi-2021b
  2) FlexiBLAS/3.2.1-GCC-12.2.0 => FlexiBLAS/3.0.4-GCC-11.2.0
  3) GCC/11.3.0 => GCC/11.2.0
  4) GCCcore/11.3.0 => GCCcore/11.2.0
  5) GMP/6.2.1-GCCcore-12.2.0 => GMP/6.2.1-GCCcore-11.2.0
  6) OpenBLAS/0.3.21-GCC-12.2.0 => OpenBLAS/0.3.18-GCC-11.2.0
  7) OpenMPI/4.1.4-GCC-12.2.0 => OpenMPI/4.1.1-GCC-11.2.0
  8) PMIx/4.2.2-GCCcore-12.2.0 => PMIx/4.1.0-GCCcore-11.2.0
  9) Python/3.10.8-GCCcore-12.2.0 => Python/3.9.6-GCCcore-11.2.0
 10) SQLite/3.39.4-GCCcore-12.2.0 => SQLite/3.36-GCCcore-11.2.0
 11) ScaLAPACK/2.2.0-gompi-2022b-fb => ScaLAPACK/2.1.0-gompi-2021b-fb
 12) SciPy-bundle/2023.02-gfbf-2022b => SciPy-bundle/2021.10-foss-2021b
 13) Tcl/8.6.12-GCCcore-12.2.0 => Tcl/8.6.11-GCCcore-11.2.0
 14) UCX/1.13.1-GCCcore-12.2.0 => UCX/1.11.2-GCCcore-11.2.0
 15) XZ/5.2.7-GCCcore-12.2.0 => XZ/5.2.5-GCCcore-11.2.0
 16) binutils/2.38-GCCcore-11.3.0 => binutils/2.37-GCCcore-11.2.0
 17) bzip2/1.0.8-GCCcore-12.2.0 => bzip2/1.0.8-GCCcore-11.2.0
 18) cURL/7.83.0-GCCcore-11.3.0 => cURL/7.78.0-GCCcore-11.2.0
 19) foss/2022b => foss/2021b
 20) gompi/2022b => gompi/2021b
 21) hwloc/2.8.0-GCCcore-12.2.0 => hwloc/2.5.0-GCCcore-11.2.0
 22) libevent/2.1.12-GCCcore-12.2.0 => libevent/2.1.12-GCCcore-11.2.0
 23) libfabric/1.16.1-GCCcore-12.2.0 => libfabric/1.13.2-GCCcore-11.2.0
 24) libffi/3.4.4-GCCcore-12.2.0 => libffi/3.4.2-GCCcore-11.2.0
 25) libpciaccess/0.17-GCCcore-12.2.0 => libpciaccess/0.16-GCCcore-11.2.0
 26) libreadline/8.2-GCCcore-12.2.0 => libreadline/8.1-GCCcore-11.2.0
 27) libxml2/2.10.3-GCCcore-12.2.0 => libxml2/2.9.10-GCCcore-11.2.0
 28) ncurses/6.3-GCCcore-12.2.0 => ncurses/6.2-GCCcore-11.2.0
 29) numactl/2.0.16-GCCcore-12.2.0 => numactl/2.0.14-GCCcore-11.2.0
 30) pybind11/2.10.3-GCCcore-12.2.0 => pybind11/2.7.1-GCCcore-11.2.0
 31) zlib/1.2.12-GCCcore-11.3.0 => zlib/1.2.11-GCCcore-11.2.0


========== DeepTools: ZH018_01 ======================================
normalization: RPKM
bamFilesList: ['/scratch/p127804/PROJECTS/Douwe/Zhe/results_Zhe/ZH018_01.sorted.bam']
binLength: 10
numberOfSamples: None
blackListFileName: None
skipZeroOverZero: False
bed_and_bin: False
genomeChunkSize: None
defaultFragmentLength: read length
numberOfProcessors: 1
verbose: False
region: None
bedFile: None
minMappingQuality: None
ignoreDuplicates: False
chrsToSkip: []
stepSize: 10
center_read: False
samFlag_include: None
samFlag_exclude: None
minFragmentLength: 0
maxFragmentLength: 0
zerosToNans: False
smoothLength: 30
save_data: False
out_file_for_raw_data: None
maxPairedFragmentLength: 1000

========== DeepTools: ZH018_02 ======================================
normalization: RPKM
bamFilesList: ['/scratch/p127804/PROJECTS/Douwe/Zhe/results_Zhe/ZH018_02.sorted.bam']
binLength: 10
numberOfSamples: None
blackListFileName: None
skipZeroOverZero: False
bed_and_bin: False
genomeChunkSize: None
defaultFragmentLength: read length
numberOfProcessors: 1
verbose: False
region: None
bedFile: None
minMappingQuality: None
ignoreDuplicates: False
chrsToSkip: []
stepSize: 10
center_read: False
samFlag_include: None
samFlag_exclude: None
minFragmentLength: 0
maxFragmentLength: 0
zerosToNans: False
smoothLength: 30
save_data: False
out_file_for_raw_data: None
maxPairedFragmentLength: 1000

========== DeepTools: ZH018_03 ======================================
normalization: RPKM
bamFilesList: ['/scratch/p127804/PROJECTS/Douwe/Zhe/results_Zhe/ZH018_03.sorted.bam']
binLength: 10
numberOfSamples: None
blackListFileName: None
skipZeroOverZero: False
bed_and_bin: False
genomeChunkSize: None
defaultFragmentLength: read length
numberOfProcessors: 1
verbose: False
region: None
bedFile: None
minMappingQuality: None
ignoreDuplicates: False
chrsToSkip: []
stepSize: 10
center_read: False
samFlag_include: None
samFlag_exclude: None
minFragmentLength: 0
maxFragmentLength: 0
zerosToNans: False
smoothLength: 30
save_data: False
out_file_for_raw_data: None
maxPairedFragmentLength: 1000

========== DeepTools: ZH018_04 ======================================
normalization: RPKM
bamFilesList: ['/scratch/p127804/PROJECTS/Douwe/Zhe/results_Zhe/ZH018_04.sorted.bam']
binLength: 10
numberOfSamples: None
blackListFileName: None
skipZeroOverZero: False
bed_and_bin: False
genomeChunkSize: None
defaultFragmentLength: read length
numberOfProcessors: 1
verbose: False
region: None
bedFile: None
minMappingQuality: None
ignoreDuplicates: False
chrsToSkip: []
stepSize: 10
center_read: False
samFlag_include: None
samFlag_exclude: None
minFragmentLength: 0
maxFragmentLength: 0
zerosToNans: False
smoothLength: 30
save_data: False
out_file_for_raw_data: None
maxPairedFragmentLength: 1000

========== DeepTools: ZH018_05 ======================================
normalization: RPKM
bamFilesList: ['/scratch/p127804/PROJECTS/Douwe/Zhe/results_Zhe/ZH018_05.sorted.bam']
binLength: 10
numberOfSamples: None
blackListFileName: None
skipZeroOverZero: False
bed_and_bin: False
genomeChunkSize: None
defaultFragmentLength: read length
numberOfProcessors: 1
verbose: False
region: None
bedFile: None
minMappingQuality: None
ignoreDuplicates: False
chrsToSkip: []
stepSize: 10
center_read: False
samFlag_include: None
samFlag_exclude: None
minFragmentLength: 0
maxFragmentLength: 0
zerosToNans: False
smoothLength: 30
save_data: False
out_file_for_raw_data: None
maxPairedFragmentLength: 1000

========== DeepTools: ZH018_06 ======================================
normalization: RPKM
bamFilesList: ['/scratch/p127804/PROJECTS/Douwe/Zhe/results_Zhe/ZH018_06.sorted.bam']
binLength: 10
numberOfSamples: None
blackListFileName: None
skipZeroOverZero: False
bed_and_bin: False
genomeChunkSize: None
defaultFragmentLength: read length
numberOfProcessors: 1
verbose: False
region: None
bedFile: None
minMappingQuality: None
ignoreDuplicates: False
chrsToSkip: []
stepSize: 10
center_read: False
samFlag_include: None
samFlag_exclude: None
minFragmentLength: 0
maxFragmentLength: 0
zerosToNans: False
smoothLength: 30
save_data: False
out_file_for_raw_data: None
maxPairedFragmentLength: 1000

========== DeepTools: ZH018_07 ======================================
normalization: RPKM
bamFilesList: ['/scratch/p127804/PROJECTS/Douwe/Zhe/results_Zhe/ZH018_07.sorted.bam']
binLength: 10
numberOfSamples: None
blackListFileName: None
skipZeroOverZero: False
bed_and_bin: False
genomeChunkSize: None
defaultFragmentLength: read length
numberOfProcessors: 1
verbose: False
region: None
bedFile: None
minMappingQuality: None
ignoreDuplicates: False
chrsToSkip: []
stepSize: 10
center_read: False
samFlag_include: None
samFlag_exclude: None
minFragmentLength: 0
maxFragmentLength: 0
zerosToNans: False
smoothLength: 30
save_data: False
out_file_for_raw_data: None
maxPairedFragmentLength: 1000

========== DeepTools: ZH018_08 ======================================
normalization: RPKM
bamFilesList: ['/scratch/p127804/PROJECTS/Douwe/Zhe/results_Zhe/ZH018_08.sorted.bam']
binLength: 10
numberOfSamples: None
blackListFileName: None
skipZeroOverZero: False
bed_and_bin: False
genomeChunkSize: None
defaultFragmentLength: read length
numberOfProcessors: 1
verbose: False
region: None
bedFile: None
minMappingQuality: None
ignoreDuplicates: False
chrsToSkip: []
stepSize: 10
center_read: False
samFlag_include: None
samFlag_exclude: None
minFragmentLength: 0
maxFragmentLength: 0
zerosToNans: False
smoothLength: 30
save_data: False
out_file_for_raw_data: None
maxPairedFragmentLength: 1000

###############################################################################
Hábrók Cluster
Job 12421294 for user p127804
Finished at: Mon Aug 12 10:46:20 CEST 2024

Job details:
============

Job ID                         : 12421294
Name                           : featureCounts
User                           : p127804
Partition                      : regularmedium
Nodes                          : node1
Number of Nodes                : 1
Cores                          : 2
Number of Tasks                : 1
State                          : RUNNING  
Submit                         : 2024-08-12T10:34:14
Start                          : 2024-08-12T10:34:15
End                            : --
Reserved walltime              : 1-00:00:00
Used walltime                  :   00:12:05
Used CPU time                  : -- 
% User (Computation)           : --
% System (I/O)                 : --
Total memory reserved          : 8G
Maximum memory used            : --

Acknowledgements:
=================

Please see this page for information about acknowledging Hábrók in your publications:

https://wiki.hpc.rug.nl/habrok/introduction/scientific_output

################################################################################