The following have been reloaded with a version change: 1) GCC/11.3.0 => GCC/12.2.0 2) GCCcore/11.3.0 => GCCcore/12.2.0 3) XZ/5.2.5-GCCcore-11.3.0 => XZ/5.2.7-GCCcore-12.2.0 4) binutils/2.38-GCCcore-11.3.0 => binutils/2.39-GCCcore-12.2.0 5) bzip2/1.0.8-GCCcore-11.3.0 => bzip2/1.0.8-GCCcore-12.2.0 6) ncurses/6.3-GCCcore-11.3.0 => ncurses/6.3-GCCcore-12.2.0 7) zlib/1.2.12-GCCcore-11.3.0 => zlib/1.2.12-GCCcore-12.2.0 The following have been reloaded with a version change: 1) GMP/6.2.1-GCCcore-11.3.0 => GMP/6.2.1-GCCcore-12.2.0 2) Python/3.10.4-GCCcore-11.3.0 => Python/3.10.8-GCCcore-12.2.0 3) SQLite/3.38.3-GCCcore-11.3.0 => SQLite/3.39.4-GCCcore-12.2.0 4) Tcl/8.6.12-GCCcore-11.3.0 => Tcl/8.6.12-GCCcore-12.2.0 5) libffi/3.4.2-GCCcore-11.3.0 => libffi/3.4.4-GCCcore-12.2.0 6) libreadline/8.1.2-GCCcore-11.3.0 => libreadline/8.2-GCCcore-12.2.0 ========== Convert DS024_001 ====================================== [bam_sort_core] merging from 0 files and 32 in-memory blocks... ========== Convert DS024_002 ====================================== [bam_sort_core] merging from 0 files and 32 in-memory blocks... ========== Convert DS024_003 ====================================== [bam_sort_core] merging from 0 files and 32 in-memory blocks... ========== Convert DS024_004 ====================================== [bam_sort_core] merging from 0 files and 32 in-memory blocks... ========== Convert DS024_005 ====================================== [bam_sort_core] merging from 0 files and 32 in-memory blocks... ========== Convert DS024_006 ====================================== [bam_sort_core] merging from 0 files and 32 in-memory blocks... ========== Convert DS024_007 ====================================== [bam_sort_core] merging from 0 files and 32 in-memory blocks... ========== Convert DS024_008 ====================================== [bam_sort_core] merging from 0 files and 32 in-memory blocks... ========== Convert DS024_009 ====================================== [bam_sort_core] merging from 0 files and 32 in-memory blocks... ========== Convert DS024_010 ====================================== [bam_sort_core] merging from 0 files and 32 in-memory blocks... ========== Convert DS024_011 ====================================== [bam_sort_core] merging from 0 files and 32 in-memory blocks... ========== Convert DS024_012 ====================================== [bam_sort_core] merging from 0 files and 32 in-memory blocks... ========== Convert DS024_013 ====================================== [bam_sort_core] merging from 0 files and 32 in-memory blocks... ========== Convert DS024_014 ====================================== [bam_sort_core] merging from 0 files and 32 in-memory blocks... ========== Convert DS024_015 ====================================== [bam_sort_core] merging from 0 files and 32 in-memory blocks... ========== Convert DS024_016 ====================================== [bam_sort_core] merging from 0 files and 32 in-memory blocks... ========== Convert DS024_017 ====================================== [bam_sort_core] merging from 0 files and 32 in-memory blocks... ========== Convert DS024_018 ====================================== [bam_sort_core] merging from 0 files and 32 in-memory blocks... ############################################################################### Hábrók Cluster Job 18111883 for user p127804 Finished at: Thu Jul 3 12:26:16 CEST 2025 Job details: ============ Job ID : 18111883 Name : 02.bowtie2_Lisa.sh User : p127804 Partition : regularmedium Nodes : node35 Number of Nodes : 1 Cores : 32 Number of Tasks : 1 State : COMPLETED Submit : 2025-07-03T12:13:56 Start : 2025-07-03T12:13:57 End : 2025-07-03T12:26:12 Reserved walltime : 1-00:00:00 Used walltime : 00:12:15 Used CPU time : 02:29:46 (Efficiency: 38.21%) % User (Computation) : 43.97% % System (I/O) : 56.03% Total memory reserved : 32G Maximum memory used : 1.12G Hints and tips : 1) The program efficiency is low. Your program is not using the assigned cores effectively. Please check if you are using all the cores you requested. You may also need to check the file in- and output pattern of your program. *) For more information on these issues see: https://wiki.hpc.rug.nl/habrok/additional_information/job_hints Acknowledgements: ================= Please see this page for information about acknowledging Hábrók in your publications: https://wiki.hpc.rug.nl/habrok/introduction/scientific_output ################################################################################