# Program:featureCounts v2.0.4; Command:"featureCounts" "-s" "2" "-M" "-t" "gene" "-g" "locus_tag" "-a" "/scratch/p127804/PROJECTS/Douwe/genomes/Moz109/Moz109_ncbi.gff" "-o" "/scratch/p127804/PROJECTS/Douwe/Jennifer_202407_017/results_Streptococcus/Moz109_2.2.counts" "/scratch/p127804/PROJECTS/Douwe/Jennifer_202407_017/results_Streptococcus/Moz109_2.sorted.bam" Geneid Chr Start End Strand Length /scratch/p127804/PROJECTS/Douwe/Jennifer_202407_017/results_Streptococcus/Moz109_2.sorted.bam StMoz109_00005 CP075363.1 66 147 + 82 189 StMoz109_00010 CP075363.1 162 234 + 73 94 StMoz109_00015 CP075363.1 241 312 + 72 12 StMoz109_00020 CP075363.1 319 404 + 86 441 StMoz109_00025 CP075363.1 419 492 + 74 32 StMoz109_00030 CP075363.1 500 573 + 74 14 StMoz109_00035 CP075363.1 579 652 + 74 14 StMoz109_00040 CP075363.1 667 740 + 74 10 StMoz109_00045 CP075363.1 760 849 + 90 231 StMoz109_00050 CP075363.1 859 932 + 74 12 StMoz109_00055 CP075363.1 936 1008 + 73 12 StMoz109_00060 CP075363.1 1021 1091 + 71 62 StMoz109_00065 CP075363.1 1125 1198 + 74 288 StMoz109_00070 CP075363.1 1203 1290 + 88 13 StMoz109_00075 CP075363.1 1347 2177 + 831 2308 StMoz109_00080 CP075363.1 2179 2703 + 525 395 StMoz109_00085 CP075363.1 2788 4212 + 1425 83031 StMoz109_00090 CP075363.1 4426 5391 + 966 7283 StMoz109_00100 CP075363.1 6498 7673 + 1176 2721 StMoz109_00105 CP075363.1 7660 8433 + 774 2294 StMoz109_00110 CP075363.1 8651 9655 + 1005 5566 StMoz109_00115 CP075363.1 9655 9900 + 246 786 StMoz109_00120 CP075363.1 10185 10892 + 708 493 StMoz109_00125 CP075363.1 10948 14673 + 3726 1514 StMoz109_00130 CP075363.1 14842 16281 + 1440 450 StMoz109_00135 CP075363.1 16312 17331 + 1020 288 StMoz109_00140 CP075363.1 17331 17885 + 555 135 StMoz109_00145 CP075363.1 17954 19501 + 1548 743 StMoz109_00155 CP075363.1 20898 21737 - 840 104 StMoz109_00160 CP075363.1 22046 23308 + 1263 699 StMoz109_00165 CP075363.1 23654 24142 + 489 175 StMoz109_00170 CP075363.1 24129 25220 + 1092 539 StMoz109_00175 CP075363.1 25413 26168 + 756 778 StMoz109_00180 CP075363.1 26240 26404 + 165 158 StMoz109_00185 CP075363.1 26683 27981 + 1299 1611 StMoz109_00190 CP075363.1 28845 30536 - 1692 4692 StMoz109_00195 CP075363.1 30691 31119 + 429 1368 StMoz109_00200 CP075363.1 31119 31478 + 360 887 StMoz109_00205 CP075363.1 31471 34029 + 2559 4069 StMoz109_00210 CP075363.1 34063 34518 - 456 69 StMoz109_00220 CP075363.1 35130 35435 + 306 267 StMoz109_00225 CP075363.1 35487 37430 + 1944 3320 StMoz109_00230 CP075363.1 37560 37781 + 222 1505 StMoz109_00235 CP075363.1 37933 38523 + 591 2141 StMoz109_00240 CP075363.1 38530 39084 + 555 1177 StMoz109_00245 CP075363.1 39180 40451 + 1272 10508 StMoz109_00250 CP075363.1 40487 41626 + 1140 5531 StMoz109_00255 CP075363.1 41803 42201 + 399 11816 StMoz109_00260 CP075363.1 42536 42640 + 105 170 StMoz109_00265 CP075363.1 42650 42723 + 74 25 StMoz109_00270 CP075363.1 42727 42799 + 73 7 StMoz109_00275 CP075363.1 42814 42894 + 81 14 StMoz109_00280 CP075363.1 42900 42970 + 71 44 StMoz109_00285 CP075363.1 42982 43054 + 73 6 StMoz109_00290 CP075363.1 43061 43132 + 72 18 StMoz109_00295 CP075363.1 43142 43225 + 84 120 StMoz109_00300 CP075363.1 43276 47670 + 4395 4507 StMoz109_00305 CP075363.1 47834 49075 + 1242 2931 StMoz109_00310 CP075363.1 49095 49325 + 231 470 StMoz109_00320 CP075363.1 49975 50526 + 552 655 StMoz109_00335 CP075363.1 53049 53119 + 71 36 StMoz109_00340 CP075363.1 53434 54201 + 768 58355 StMoz109_00345 CP075363.1 54312 55352 + 1041 47316 StMoz109_00350 CP075363.1 55462 55932 - 471 2679 StMoz109_00355 CP075363.1 56176 56631 + 456 1322 StMoz109_00360 CP075363.1 56632 59082 + 2451 8984 StMoz109_00375 CP075363.1 61064 62311 - 1248 6687 StMoz109_00380 CP075363.1 62520 64745 + 2226 6997 StMoz109_00385 CP075363.1 64754 65524 + 771 1624 StMoz109_00390 CP075363.1 65597 66217 + 621 1363 StMoz109_00395 CP075363.1 66599 67942 + 1344 2539 StMoz109_00400 CP075363.1 67935 68336 + 402 479 StMoz109_00405 CP075363.1 68619 68774 + 156 62 StMoz109_00410 CP075363.1 68829 69005 + 177 24 StMoz109_00415 CP075363.1 69109 69351 + 243 83 StMoz109_00420 CP075363.1 69399 70142 + 744 2422 StMoz109_00425 CP075363.1 70145 70660 + 516 1513 StMoz109_00430 CP075363.1 70669 71529 + 861 3717 StMoz109_00440 CP075363.1 72469 73425 + 957 6621 StMoz109_00445 CP075363.1 73634 74080 + 447 43052 StMoz109_00450 CP075363.1 74108 74500 + 393 36635 StMoz109_00460 CP075363.1 74929 75237 + 309 296 StMoz109_00465 CP075363.1 75485 75589 + 105 184 StMoz109_00470 CP075363.1 75632 77347 + 1716 2795 StMoz109_00475 CP075363.1 77573 77740 - 168 38 StMoz109_00480 CP075363.1 78033 78715 - 683 325 StMoz109_00490 CP075363.1 80407 80673 + 267 1477 StMoz109_00495 CP075363.1 80691 82028 + 1338 6676 StMoz109_00500 CP075363.1 82145 82849 + 705 2460 StMoz109_00505 CP075363.1 82836 83633 + 798 2304 StMoz109_00510 CP075363.1 83630 84214 + 585 2735 StMoz109_00525 CP075363.1 84834 85916 + 1083 22926 StMoz109_00530 CP075363.1 85909 86520 + 612 14953 StMoz109_00535 CP075363.1 86649 88472 + 1824 58222 StMoz109_00540 CP075363.1 88900 90033 + 1134 10318 StMoz109_00545 CP075363.1 90139 90885 + 747 4343 StMoz109_00550 CP075363.1 90878 91639 + 762 3451 StMoz109_00560 CP075363.1 93062 93406 + 345 228 StMoz109_00565 CP075363.1 93509 94699 + 1191 3379 StMoz109_00580 CP075363.1 96177 96674 + 498 166 StMoz109_00585 CP075363.1 96774 97616 - 843 1582 StMoz109_00590 CP075363.1 97757 99040 + 1284 62390 StMoz109_00595 CP075363.1 99198 99773 + 576 17670 StMoz109_00600 CP075363.1 100024 101628 + 1605 3177 StMoz109_00605 CP075363.1 101723 102193 + 471 892 StMoz109_00610 CP075363.1 102209 102655 + 447 596 StMoz109_00615 CP075363.1 102655 103608 + 954 1094 StMoz109_00620 CP075363.1 103609 104352 + 744 707 StMoz109_00630 CP075363.1 107099 107557 - 459 924 StMoz109_00635 CP075363.1 107726 109945 + 2220 9258 StMoz109_00640 CP075363.1 109958 110401 + 444 1585 StMoz109_00645 CP075363.1 110842 111126 + 285 127 StMoz109_00650 CP075363.1 111056 111553 + 498 188 StMoz109_00655 CP075363.1 111608 112378 + 771 355 StMoz109_00660 CP075363.1 112679 113929 + 1251 1086 StMoz109_00665 CP075363.1 114090 114704 - 615 14579 StMoz109_00670 CP075363.1 114798 115436 - 639 359 StMoz109_00675 CP075363.1 115543 116706 + 1164 591 StMoz109_00680 CP075363.1 116855 117124 + 270 34147 StMoz109_00685 CP075363.1 117354 117935 - 582 1665 StMoz109_00690 CP075363.1 118504 118674 + 171 719 StMoz109_00695 CP075363.1 118761 118868 + 108 382 StMoz109_00700 CP075363.1 118955 119695 - 741 3998 StMoz109_00705 CP075363.1 119695 121245 - 1551 3604 StMoz109_00710 CP075363.1 121448 122302 + 855 1092 StMoz109_00720 CP075363.1 122928 123677 + 750 3090 StMoz109_00725 CP075363.1 123681 124838 + 1158 4044 StMoz109_00730 CP075363.1 124999 125769 + 771 3325 StMoz109_00735 CP075363.1 125806 127068 + 1263 4781 StMoz109_00740 CP075363.1 127122 128354 + 1233 2684 StMoz109_00745 CP075363.1 128341 128775 + 435 618 StMoz109_00750 CP075363.1 128855 130273 + 1419 7447 StMoz109_00775 CP075363.1 133893 134831 + 939 282 StMoz109_00785 CP075363.1 135388 136254 + 867 1467 StMoz109_00790 CP075363.1 136247 137224 + 978 1625 StMoz109_00795 CP075363.1 137453 138721 + 1269 3715 StMoz109_00800 CP075363.1 138827 139270 + 444 602 StMoz109_00805 CP075363.1 139272 139979 + 708 842 StMoz109_00810 CP075363.1 139972 140784 + 813 1200 StMoz109_00815 CP075363.1 140946 141884 + 939 325 StMoz109_00830 CP075363.1 145244 146593 + 1350 34630 StMoz109_00835 CP075363.1 146781 147497 + 717 12728 StMoz109_00840 CP075363.1 147623 147961 + 339 5708 StMoz109_00845 CP075363.1 148090 148839 + 750 6505 StMoz109_00850 CP075363.1 148852 149646 + 795 3874 StMoz109_00855 CP075363.1 149663 150925 + 1263 6364 StMoz109_00860 CP075363.1 150996 152858 + 1863 16506 StMoz109_00865 CP075363.1 153475 155415 + 1941 974 StMoz109_00870 CP075363.1 155415 156218 + 804 530 StMoz109_00875 CP075363.1 156389 156676 + 288 41339 StMoz109_00880 CP075363.1 156725 158344 + 1620 181114 StMoz109_00890 CP075363.1 159759 160067 - 309 2079 StMoz109_00895 CP075363.1 160577 160882 - 306 297 StMoz109_00900 CP075363.1 160882 161214 - 333 423 StMoz109_00905 CP075363.1 161394 162266 - 873 432 StMoz109_00910 CP075363.1 162332 164659 + 2328 6348 StMoz109_00915 CP075363.1 164708 164860 + 153 2143 StMoz109_00920 CP075363.1 164869 165045 + 177 2354 StMoz109_00925 CP075363.1 165242 165781 + 540 5838 StMoz109_00930 CP075363.1 165903 166391 + 489 478 StMoz109_00940 CP075363.1 167328 168092 - 765 311 StMoz109_00945 CP075363.1 168266 170767 + 2502 5975 StMoz109_00950 CP075363.1 171064 171420 + 357 49 StMoz109_00960 CP075363.1 172998 174452 + 1455 3043 StMoz109_00965 CP075363.1 174464 175285 + 822 2096 StMoz109_00970 CP075363.1 175301 175741 + 441 1550 StMoz109_00975 CP075363.1 175843 177180 + 1338 22638 StMoz109_00980 CP075363.1 177290 179620 - 2331 17377 StMoz109_00985 CP075363.1 179620 180216 - 597 5858 StMoz109_00990 CP075363.1 180293 180808 + 516 256 StMoz109_00995 CP075363.1 180917 181249 + 333 4112 StMoz109_01000 CP075363.1 181265 181632 + 368 374094 StMoz109_01005 CP075363.1 181782 182948 + 1167 3370 StMoz109_01010 CP075363.1 182951 184813 + 1863 24746 StMoz109_01015 CP075363.1 184924 188019 + 3096 8494 StMoz109_01020 CP075363.1 188175 188891 + 717 8148 StMoz109_01025 CP075363.1 188918 190246 + 1329 16072 StMoz109_01035 CP075363.1 191160 193136 + 1977 16193 StMoz109_01040 CP075363.1 193220 193702 + 483 9102 StMoz109_01050 CP075363.1 194651 195568 - 918 8139 StMoz109_01055 CP075363.1 195655 195933 - 279 138 StMoz109_01060 CP075363.1 196036 196773 + 738 7590 StMoz109_01065 CP075363.1 196875 197369 + 495 6044 StMoz109_01070 CP075363.1 197403 198092 + 690 9017 StMoz109_01080 CP075363.1 199662 200915 + 1254 1223 StMoz109_01085 CP075363.1 200944 201483 - 540 55 StMoz109_01090 CP075363.1 201724 201969 + 246 8708 StMoz109_01095 CP075363.1 202034 202849 + 816 1849 StMoz109_01100 CP075363.1 202842 203816 + 975 1396 StMoz109_01105 CP075363.1 203798 204319 + 522 705 StMoz109_01110 CP075363.1 204316 204798 + 483 636 StMoz109_01115 CP075363.1 204752 205513 + 762 1047 StMoz109_01120 CP075363.1 205513 206226 + 714 901 StMoz109_01125 CP075363.1 206219 206800 + 582 946 StMoz109_01130 CP075363.1 206893 207618 + 726 1324 StMoz109_01135 CP075363.1 207615 207866 + 252 509 StMoz109_01140 CP075363.1 207889 209328 - 1440 3041 StMoz109_01145 CP075363.1 209335 210684 - 1350 2490 StMoz109_01150 CP075363.1 210973 211482 + 510 4504 StMoz109_01155 CP075363.1 211794 212351 + 558 189 StMoz109_01160 CP075363.1 212354 213004 + 651 342 StMoz109_01165 CP075363.1 213199 214098 + 900 600 StMoz109_01175 CP075363.1 215224 215514 + 291 46 StMoz109_01185 CP075363.1 215979 216368 + 390 45 StMoz109_01190 CP075363.1 216495 216806 + 312 261 StMoz109_01200 CP075363.1 218599 219114 + 516 229 StMoz109_01205 CP075363.1 219139 219441 + 303 191 StMoz109_01210 CP075363.1 219453 219764 + 312 206 StMoz109_01215 CP075363.1 219780 221498 + 1719 1133 StMoz109_01220 CP075363.1 221639 222091 + 453 209 StMoz109_01225 CP075363.1 222081 222794 + 714 418 StMoz109_01230 CP075363.1 222824 223438 + 615 295 StMoz109_01235 CP075363.1 223440 224279 + 840 418 StMoz109_01240 CP075363.1 224283 225260 + 978 384 StMoz109_01245 CP075363.1 225257 226036 + 780 375 StMoz109_01250 CP075363.1 226038 226751 + 714 672 StMoz109_01255 CP075363.1 226916 227764 + 849 3582 StMoz109_01260 CP075363.1 227954 230845 + 2892 6982 StMoz109_01265 CP075363.1 230842 232488 + 1647 4821 StMoz109_01270 CP075363.1 232514 233722 + 1209 1841 StMoz109_01280 CP075363.1 234428 235276 + 849 4183 StMoz109_01285 CP075363.1 235436 236338 + 903 7873 StMoz109_01290 CP075363.1 236400 236882 + 483 1926 StMoz109_01295 CP075363.1 236940 237305 + 366 1923 StMoz109_01305 CP075363.1 237402 237773 + 372 1261 StMoz109_01310 CP075363.1 237766 238833 + 1068 4564 StMoz109_01315 CP075363.1 238833 239525 + 693 3370 StMoz109_01320 CP075363.1 239648 240856 + 1209 1613 StMoz109_01325 CP075363.1 241009 241857 + 849 2624 StMoz109_01330 CP075363.1 241867 242412 + 546 1184 StMoz109_01335 CP075363.1 242478 244154 + 1677 3913 StMoz109_01340 CP075363.1 244147 244977 + 831 1449 StMoz109_01345 CP075363.1 245187 247163 + 1977 10153 StMoz109_01350 CP075363.1 247412 248083 - 672 3494 StMoz109_01355 CP075363.1 248123 249508 - 1386 3395 StMoz109_01360 CP075363.1 249557 250270 - 714 3204 StMoz109_01365 CP075363.1 250567 251103 + 537 3003 StMoz109_01370 CP075363.1 251260 251949 + 690 13242 StMoz109_01375 CP075363.1 251946 253463 + 1518 4115 StMoz109_01380 CP075363.1 253585 254064 + 480 2641 StMoz109_01385 CP075363.1 254061 255236 + 1176 3680 StMoz109_01390 CP075363.1 255240 256142 + 903 4667 StMoz109_01395 CP075363.1 256248 257558 + 1311 9505 StMoz109_01420 CP075363.1 260947 262224 - 1278 8316 StMoz109_01425 CP075363.1 262433 262807 - 375 492 StMoz109_01430 CP075363.1 262886 263797 - 912 4801 StMoz109_01435 CP075363.1 263812 264639 - 828 2652 StMoz109_01440 CP075363.1 264707 265699 - 993 8407 StMoz109_01445 CP075363.1 266075 266806 + 732 930 StMoz109_01450 CP075363.1 266851 267663 - 813 2237 StMoz109_01455 CP075363.1 267872 269293 + 1422 1775 StMoz109_01460 CP075363.1 269565 270008 + 444 1226 StMoz109_01465 CP075363.1 270001 270522 + 522 1338 StMoz109_01470 CP075363.1 270531 271757 + 1227 6613 StMoz109_01475 CP075363.1 271898 272371 + 474 1006 StMoz109_01480 CP075363.1 272437 273624 + 1188 2936 StMoz109_01485 CP075363.1 273645 273941 + 297 459 StMoz109_01490 CP075363.1 273934 274236 + 303 461 StMoz109_01495 CP075363.1 274255 277086 + 2832 9193 StMoz109_01500 CP075363.1 277180 277533 + 354 1594 StMoz109_01515 CP075363.1 279756 281201 - 1446 3018 StMoz109_01520 CP075363.1 281296 282927 + 1632 5419 StMoz109_01525 CP075363.1 282951 283562 + 612 80 StMoz109_01530 CP075363.1 283866 284960 + 1095 1101 StMoz109_01535 CP075363.1 284971 286134 + 1164 1010 StMoz109_01540 CP075363.1 286210 286377 + 168 91 StMoz109_01545 CP075363.1 286418 286693 + 276 119 StMoz109_01550 CP075363.1 286823 287452 + 630 10771 StMoz109_01555 CP075363.1 287590 288180 + 591 30368 StMoz109_01560 CP075363.1 288267 288716 + 450 2878 StMoz109_01565 CP075363.1 288709 288990 + 282 890 StMoz109_01570 CP075363.1 289147 290322 + 1176 1445 StMoz109_01575 CP075363.1 290366 291250 + 885 778 StMoz109_01580 CP075363.1 291254 292204 + 951 1031 StMoz109_01585 CP075363.1 292207 292971 + 765 1200 StMoz109_01590 CP075363.1 292971 293681 + 711 1589 StMoz109_01600 CP075363.1 294644 295570 - 927 5177 StMoz109_01605 CP075363.1 295672 296298 - 627 1096 StMoz109_01610 CP075363.1 296353 297672 + 1320 526 StMoz109_01615 CP075363.1 297653 298315 + 663 414 StMoz109_01620 CP075363.1 298394 298942 + 549 24643 StMoz109_01625 CP075363.1 299358 299473 + 116 65 StMoz109_01630 CP075363.1 299479 299551 + 73 128 StMoz109_01635 CP075363.1 299554 299626 + 73 5 StMoz109_01640 CP075363.1 299646 299718 + 73 6 StMoz109_01645 CP075363.1 299724 299806 + 83 22 StMoz109_01650 CP075363.1 299821 299893 + 73 80 StMoz109_01655 CP075363.1 299901 299972 + 72 174 StMoz109_01660 CP075363.1 300062 300994 + 933 26080 StMoz109_01670 CP075363.1 301736 302269 - 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