========= Bowtie2 SE: DS022_12 ================================= stat: Bad file descriptor Warning: Could not open read file "/scratch/hb-molgen/NGSdata/20250303_022/DS022_12_S12_L001_R1_001.fastq.g" for reading; skipping... Error: No input read files were valid (ERR): bowtie2-align exited with value 1 ========= Bowtie2 SE: DS022_12 ================================= 3865713 reads; of these: 3865713 (100.00%) were unpaired; of these: 771773 (19.96%) aligned 0 times 1506105 (38.96%) aligned exactly 1 time 1587835 (41.07%) aligned >1 times 80.04% overall alignment rate