##fileformat=VCFv4.2 ##source=Sniffles ##fileDate=20170117 ##ALT= ##ALT= ##ALT= ##ALT= ##ALT= ##ALT= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##FORMAT= ##FORMAT= ##FORMAT= #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT /seq/schatz/fritz/sv-paper/real/Pac_skbr3/mapped/reads_lr_skbr3.fa.ngmlr-0.2.1_mapped.bam 1 564466 26582 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=MT;END=3916;STD_quant_start=198.695999;STD_quant_stop=234.736235;Kurtosis_quant_start=0.913054;Kurtosis_quant_stop=-0.183504;SVTYPE=TRA;SUPTYPE=SR;SVLEN=-1199826434;STRANDS=-+;STRANDS2=2,9,2,9;RE=11 GT:DR:DV ./.:.:11 1 566067 26583 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=MT;END=5516;STD_quant_start=304.694578;STD_quant_stop=326.576397;Kurtosis_quant_start=-1.029449;Kurtosis_quant_stop=-1.076911;SVTYPE=TRA;SUPTYPE=SR;SVLEN=-1199826435;STRANDS=-+;STRANDS2=14,15,13,16;RE=29 GT:DR:DV ./.:.:29 1 567802 26584 N . 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PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=8;END=88652874;STD_quant_start=0.000000;STD_quant_stop=0.904534;Kurtosis_quant_start=7.583726;Kurtosis_quant_stop=4.992363;SVTYPE=TRA;SUPTYPE=SR;SVLEN=975452035;STRANDS=--;STRANDS2=0,22,22,0;RE=22 GT:DR:DV ./.:.:22 3 111275066 26858 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=8;END=128533851;STD_quant_start=0.875348;STD_quant_stop=0.000000;Kurtosis_quant_start=-0.213262;Kurtosis_quant_stop=87.641865;SVTYPE=TRA;SUPTYPE=SR;SVLEN=917609481;STRANDS=++;STRANDS2=154,0,0,154;RE=154 GT:DR:DV ./.:.:154 3 141362873 26866 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=8;END=89804899;STD_quant_start=0.000000;STD_quant_stop=0.485071;Kurtosis_quant_start=30.808460;Kurtosis_quant_stop=29.922913;SVTYPE=TRA;SUPTYPE=SR;SVLEN=848792722;STRANDS=-+;STRANDS2=16,18,16,18;RE=34 GT:DR:DV ./.:.:34 3 155027218 26879 N . 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PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=8;END=133497676;STD_quant_start=1.044466;STD_quant_stop=1.243163;Kurtosis_quant_start=4.336447;Kurtosis_quant_stop=0.238406;SVTYPE=TRA;SUPTYPE=SR;SVLEN=496838100;STRANDS=+-;STRANDS2=12,11,12,11;RE=23 GT:DR:DV ./.:.:23 5 147831842 27018 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=8;END=108045141;STD_quant_start=1.027402;STD_quant_stop=0.471405;Kurtosis_quant_start=16.042720;Kurtosis_quant_stop=26.469817;SVTYPE=TRA;SUPTYPE=SR;SVLEN=471385289;STRANDS=-+;STRANDS2=18,18,18,18;RE=36 GT:DR:DV ./.:.:36 5 147963803 27019 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=8;END=137116850;STD_quant_start=2.345208;STD_quant_stop=1.549193;Kurtosis_quant_start=8.868981;Kurtosis_quant_stop=6.899688;SVTYPE=TRA;SUPTYPE=SR;SVLEN=500325037;STRANDS=++;STRANDS2=13,0,0,13;RE=13 GT:DR:DV ./.:.:13 5 148005640 27020 N . 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PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=X;END=66982772;STD_quant_start=0.000000;STD_quant_stop=0.547723;Kurtosis_quant_start=16.394083;Kurtosis_quant_stop=-0.580794;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1907057641;STRANDS=-+;STRANDS2=10,10,10,10;RE=20 GT:DR:DV ./.:.:20 5 159351200 27042 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=X;END=66982754;STD_quant_start=0.000000;STD_quant_stop=0.316228;Kurtosis_quant_start=13.937285;Kurtosis_quant_stop=4.105542;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1907056140;STRANDS=+-;STRANDS2=9,8,9,8;RE=17 GT:DR:DV ./.:.:17 6 382459 27047 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=16;END=33428531;STD_quant_start=0.755929;STD_quant_stop=0.845154;Kurtosis_quant_start=7.021472;Kurtosis_quant_stop=6.400570;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1380331223;STRANDS=++;STRANDS2=29,0,0,29;RE=29 GT:DR:DV ./.:.:29 6 24684004 27052 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=22;END=32927890;STD_quant_start=0.894427;STD_quant_stop=3.435113;Kurtosis_quant_start=1.066116;Kurtosis_quant_stop=-1.826531;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1775446646;STRANDS=+-;STRANDS2=2,10,2,10;RE=12 GT:DR:DV ./.:.:12 6 116774304 27105 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=7;END=26251701;STD_quant_start=0.632456;STD_quant_stop=0.000000;Kurtosis_quant_start=15.010649;Kurtosis_quant_stop=5.172548;SVTYPE=TRA;SUPTYPE=SR;SVLEN=80593464;STRANDS=--;STRANDS2=0,19,19,0;RE=19 GT:DR:DV ./.:.:19 6 116774819 27106 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=15;END=40854180;STD_quant_start=0.000000;STD_quant_stop=0.000000;Kurtosis_quant_start=7.931310;Kurtosis_quant_stop=4.142857;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1168832120;STRANDS=+-;STRANDS2=10,10,10,10;RE=20 GT:DR:DV ./.:.:20 7 1916576 27136 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=22;END=23774214;STD_quant_start=0.554700;STD_quant_stop=0.832050;Kurtosis_quant_start=9.813105;Kurtosis_quant_stop=13.000726;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1617944331;STRANDS=++;STRANDS2=26,0,0,26;RE=26 GT:DR:DV ./.:.:26 7 1916573 27137 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=22;END=23771710;STD_quant_start=0.554700;STD_quant_stop=0.960769;Kurtosis_quant_start=3.878935;Kurtosis_quant_stop=3.036421;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1617941830;STRANDS=--;STRANDS2=0,27,27,0;RE=27 GT:DR:DV ./.:.:27 7 6206531 27138 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=10;END=58374883;STD_quant_start=1.154701;STD_quant_stop=0.645497;Kurtosis_quant_start=11.443633;Kurtosis_quant_stop=20.972145;SVTYPE=TRA;SUPTYPE=SR;SVLEN=498887468;STRANDS=-+;STRANDS2=10,14,10,14;RE=24 GT:DR:DV ./.:.:24 7 26251702 27150 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=15;END=40854180;STD_quant_start=1.183216;STD_quant_stop=0.707107;Kurtosis_quant_start=7.827586;Kurtosis_quant_stop=6.076132;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1088239170;STRANDS=--;STRANDS2=0,11,11,0;RE=11 GT:DR:DV ./.:.:11 7 26252972 27151 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=15;END=40854195;STD_quant_start=0.000000;STD_quant_stop=0.000000;Kurtosis_quant_start=10.226764;Kurtosis_quant_stop=32.317485;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1088237915;STRANDS=++;STRANDS2=39,0,0,39;RE=39 GT:DR:DV ./.:.:39 7 61846559 27171 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=16;END=32515392;STD_quant_start=7.019453;STD_quant_stop=3.919647;Kurtosis_quant_start=9.441098;Kurtosis_quant_stop=12.497802;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1146837917;STRANDS=++;STRANDS2=21,1,1,21;RE=22 GT:DR:DV ./.:.:22 7 81789148 27187 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=10;END=60902409;STD_quant_start=0.000000;STD_quant_stop=0.000000;Kurtosis_quant_start=38.413223;Kurtosis_quant_stop=2.936512;SVTYPE=TRA;SUPTYPE=SR;SVLEN=425832377;STRANDS=--;STRANDS2=0,50,50,0;RE=50 GT:DR:DV ./.:.:50 7 114667925 27206 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=MT;END=8500;STD_quant_start=2.570738;STD_quant_stop=0.466252;Kurtosis_quant_start=2.523865;Kurtosis_quant_stop=2.770301;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1747378960;STRANDS=++;STRANDS2=46,0,0,46;RE=46 GT:DR:DV ./.:.:46 7 114670635 27207 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=MT;END=3218;STD_quant_start=0.500000;STD_quant_stop=0.387298;Kurtosis_quant_start=10.725633;Kurtosis_quant_stop=42.494116;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1747370968;STRANDS=--;STRANDS2=0,80,80,0;RE=80 GT:DR:DV ./.:.:80 7 132848765 27212 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=10;END=66518375;STD_quant_start=0.738549;STD_quant_stop=0.603023;Kurtosis_quant_start=17.690899;Kurtosis_quant_stop=8.487328;SVTYPE=TRA;SUPTYPE=SR;SVLEN=380388726;STRANDS=-+;STRANDS2=12,10,12,10;RE=22 GT:DR:DV ./.:.:22 8 52730143 27274 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=11;END=38812670;STD_quant_start=0.000000;STD_quant_stop=0.000000;Kurtosis_quant_start=15.791162;Kurtosis_quant_stop=36.641927;SVTYPE=TRA;SUPTYPE=SR;SVLEN=409197727;STRANDS=-+;STRANDS2=20,20,20,20;RE=40 GT:DR:DV ./.:.:40 8 52731480 27275 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=11;END=38812657;STD_quant_start=0.564076;STD_quant_stop=0.522233;Kurtosis_quant_start=22.334314;Kurtosis_quant_stop=7.883255;SVTYPE=TRA;SUPTYPE=SR;SVLEN=409196377;STRANDS=+-;STRANDS2=17,27,17,27;RE=44 GT:DR:DV ./.:.:44 8 77264212 27285 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=19;END=14771336;STD_quant_start=0.707107;STD_quant_stop=0.547723;Kurtosis_quant_start=10.700022;Kurtosis_quant_stop=2.214286;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1204166756;STRANDS=--;STRANDS2=0,14,14,0;RE=14 GT:DR:DV ./.:.:14 8 77706277 27286 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=14;END=57041014;STD_quant_start=1.643168;STD_quant_stop=1.897367;Kurtosis_quant_start=0.371692;Kurtosis_quant_stop=11.965725;SVTYPE=TRA;SUPTYPE=SR;SVLEN=786481226;STRANDS=--;STRANDS2=0,15,15,0;RE=15 GT:DR:DV ./.:.:15 8 78454701 27287 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=17;END=78166081;STD_quant_start=0.567962;STD_quant_stop=0.595683;Kurtosis_quant_start=33.090396;Kurtosis_quant_stop=53.094175;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1107096554;STRANDS=++;STRANDS2=63,0,0,63;RE=63 GT:DR:DV ./.:.:63 8 79165476 27288 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=14;END=52222851;STD_quant_start=0.929320;STD_quant_stop=1.279204;Kurtosis_quant_start=35.146499;Kurtosis_quant_stop=20.019637;SVTYPE=TRA;SUPTYPE=SR;SVLEN=780203864;STRANDS=+-;STRANDS2=17,28,17,28;RE=45 GT:DR:DV ./.:.:45 8 79475426 27289 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=17;END=38474391;STD_quant_start=0.812636;STD_quant_stop=2.064982;Kurtosis_quant_start=42.159083;Kurtosis_quant_stop=19.868554;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1066384139;STRANDS=-+;STRANDS2=58,49,58,49;RE=107 GT:DR:DV ./.:.:107 8 80012981 27290 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=X;END=93874349;STD_quant_start=0.447214;STD_quant_stop=0.000000;Kurtosis_quant_start=3.590737;Kurtosis_quant_stop=1.580161;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1502113964;STRANDS=--;STRANDS2=0,19,19,0;RE=19 GT:DR:DV ./.:.:19 8 80084495 27291 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=17;END=39542194;STD_quant_start=58.574739;STD_quant_stop=0.316228;Kurtosis_quant_start=3.455862;Kurtosis_quant_stop=12.692169;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1066842873;STRANDS=++;STRANDS2=16,0,0,16;RE=16 GT:DR:DV ./.:.:16 8 80086763 27292 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=17;END=39542193;STD_quant_start=7.424621;STD_quant_stop=0.530330;Kurtosis_quant_start=-0.145276;Kurtosis_quant_stop=19.808637;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1066840604;STRANDS=++;STRANDS2=64,0,0,64;RE=64 GT:DR:DV ./.:.:64 8 83499057 27293 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=14;END=57066926;STD_quant_start=0.000000;STD_quant_stop=0.000000;Kurtosis_quant_start=39.017326;Kurtosis_quant_stop=17.276477;SVTYPE=TRA;SUPTYPE=SR;SVLEN=780714358;STRANDS=--;STRANDS2=0,46,46,0;RE=46 GT:DR:DV ./.:.:46 8 87386932 27294 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=X;END=102225914;STD_quant_start=0.000000;STD_quant_stop=0.577350;Kurtosis_quant_start=22.535205;Kurtosis_quant_stop=15.586096;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1503091578;STRANDS=--;STRANDS2=0,31,31,0;RE=31 GT:DR:DV ./.:.:31 8 87627082 27295 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=X;END=104471467;STD_quant_start=0.301511;STD_quant_stop=0.000000;Kurtosis_quant_start=18.035754;Kurtosis_quant_stop=8.077354;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1505096981;STRANDS=++;STRANDS2=22,0,0,22;RE=22 GT:DR:DV ./.:.:22 8 90190191 27296 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=X;END=104469741;STD_quant_start=0.522233;STD_quant_stop=0.522233;Kurtosis_quant_start=19.582557;Kurtosis_quant_stop=16.802195;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1502532146;STRANDS=--;STRANDS2=0,23,23,0;RE=23 GT:DR:DV ./.:.:23 8 91704095 27297 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=14;END=64434787;STD_quant_start=0.674200;STD_quant_stop=0.522233;Kurtosis_quant_start=2.144628;Kurtosis_quant_stop=7.805502;SVTYPE=TRA;SUPTYPE=SR;SVLEN=779877181;STRANDS=--;STRANDS2=0,22,22,0;RE=22 GT:DR:DV ./.:.:22 8 91944009 27298 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=14;END=58569878;STD_quant_start=0.447214;STD_quant_stop=0.547723;Kurtosis_quant_start=15.964979;Kurtosis_quant_stop=-0.647448;SVTYPE=TRA;SUPTYPE=SR;SVLEN=773772358;STRANDS=--;STRANDS2=0,19,19,0;RE=19 GT:DR:DV ./.:.:19 8 92418022 27299 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=14;END=51282873;STD_quant_start=0.679366;STD_quant_stop=1.467599;Kurtosis_quant_start=11.537899;Kurtosis_quant_stop=7.661563;SVTYPE=TRA;SUPTYPE=SR;SVLEN=766011340;STRANDS=-+;STRANDS2=11,15,11,15;RE=26 GT:DR:DV ./.:.:26 8 92439343 27300 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=17;END=65757912;STD_quant_start=0.534522;STD_quant_stop=0.000000;Kurtosis_quant_start=10.996902;Kurtosis_quant_stop=11.717952;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1080703743;STRANDS=++;STRANDS2=29,0,0,29;RE=29 GT:DR:DV ./.:.:29 8 112373018 27304 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=X;END=78701718;STD_quant_start=0.547723;STD_quant_stop=0.632456;Kurtosis_quant_start=17.710558;Kurtosis_quant_stop=13.140037;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1454581296;STRANDS=-+;STRANDS2=12,9,12,9;RE=21 GT:DR:DV ./.:.:21 8 112376649 27305 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=X;END=76792724;STD_quant_start=0.707107;STD_quant_stop=0.632456;Kurtosis_quant_start=16.400364;Kurtosis_quant_stop=17.899715;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1452668671;STRANDS=+-;STRANDS2=11,10,11,10;RE=21 GT:DR:DV ./.:.:21 8 112924520 27306 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=14;END=64163564;STD_quant_start=1.702939;STD_quant_stop=1.974842;Kurtosis_quant_start=-0.526042;Kurtosis_quant_stop=-0.519603;SVTYPE=TRA;SUPTYPE=SR;SVLEN=758385533;STRANDS=++;STRANDS2=19,0,0,19;RE=19 GT:DR:DV ./.:.:19 8 115501743 27307 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=14;END=84882550;STD_quant_start=1.048809;STD_quant_stop=0.447214;Kurtosis_quant_start=0.978516;Kurtosis_quant_stop=2.065312;SVTYPE=TRA;SUPTYPE=SR;SVLEN=776527296;STRANDS=-+;STRANDS2=7,11,7,11;RE=18 GT:DR:DV ./.:.:18 8 115851296 27308 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=14;END=45993847;STD_quant_start=0.426401;STD_quant_stop=0.603023;Kurtosis_quant_start=7.792920;Kurtosis_quant_stop=15.437757;SVTYPE=TRA;SUPTYPE=SR;SVLEN=737289040;STRANDS=-+;STRANDS2=13,9,13,9;RE=22 GT:DR:DV ./.:.:22 8 115856577 27309 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=14;END=57046328;STD_quant_start=0.000000;STD_quant_stop=0.554700;Kurtosis_quant_start=22.854758;Kurtosis_quant_stop=15.787321;SVTYPE=TRA;SUPTYPE=SR;SVLEN=748336240;STRANDS=+-;STRANDS2=14,13,14,13;RE=27 GT:DR:DV ./.:.:27 8 115856622 27310 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=14;END=85492900;STD_quant_start=0.845154;STD_quant_stop=1.690309;Kurtosis_quant_start=17.349210;Kurtosis_quant_stop=16.298370;SVTYPE=TRA;SUPTYPE=SR;SVLEN=776782767;STRANDS=--;STRANDS2=0,56,56,0;RE=56 GT:DR:DV ./.:.:56 8 117989050 27313 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=17;END=40572172;STD_quant_start=0.730297;STD_quant_stop=0.516398;Kurtosis_quant_start=7.782517;Kurtosis_quant_stop=16.710921;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1029968296;STRANDS=-+;STRANDS2=31,29,31,29;RE=60 GT:DR:DV ./.:.:60 8 119611754 27314 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=13;END=95081131;STD_quant_start=1.581139;STD_quant_stop=0.000000;Kurtosis_quant_start=20.332400;Kurtosis_quant_stop=19.784083;SVTYPE=TRA;SUPTYPE=SR;SVLEN=667444988;STRANDS=+-;STRANDS2=14,10,14,10;RE=24 GT:DR:DV ./.:.:24 8 121542260 27315 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=17;END=76745814;STD_quant_start=0.684653;STD_quant_stop=0.750000;Kurtosis_quant_start=56.777515;Kurtosis_quant_stop=34.992520;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1062588728;STRANDS=--;STRANDS2=0,65,65,0;RE=65 GT:DR:DV ./.:.:65 8 121550938 27316 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=17;END=37277012;STD_quant_start=0.611142;STD_quant_stop=0.756498;Kurtosis_quant_start=114.969379;Kurtosis_quant_stop=26.951615;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1023111248;STRANDS=--;STRANDS2=0,333,333,0;RE=333 GT:DR:DV ./.:.:333 8 121677137 27317 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=14;END=58502840;STD_quant_start=0.397360;STD_quant_stop=40.091999;Kurtosis_quant_start=32.701958;Kurtosis_quant_stop=0.785138;SVTYPE=TRA;SUPTYPE=SR;SVLEN=743972192;STRANDS=-+;STRANDS2=24,15,24,15;RE=39 GT:DR:DV ./.:.:39 8 123492233 27318 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=15;END=88059647;STD_quant_start=270.194004;STD_quant_stop=278.049816;Kurtosis_quant_start=-0.287536;Kurtosis_quant_stop=-0.436157;SVTYPE=TRA;SUPTYPE=SR;SVLEN=879064443;STRANDS=+-;STRANDS2=7,4,7,4;RE=11 GT:DR:DV ./.:.:11 8 123534798 27319 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=21;END=21812695;STD_quant_start=0.557086;STD_quant_stop=0.587220;Kurtosis_quant_start=51.817375;Kurtosis_quant_stop=43.785240;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1287094032;STRANDS=++;STRANDS2=58,0,1,57;RE=58 GT:DR:DV ./.:.:58 8 123536376 27320 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=21;END=21812520;STD_quant_start=0.500000;STD_quant_stop=0.000000;Kurtosis_quant_start=22.787127;Kurtosis_quant_stop=52.412713;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1287092279;STRANDS=+-;STRANDS2=27,29,26,30;RE=56 GT:DR:DV ./.:.:56 8 123907489 27321 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=17;END=64043765;STD_quant_start=0.342997;STD_quant_stop=0.000000;Kurtosis_quant_start=29.654625;Kurtosis_quant_stop=13.163148;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1047521450;STRANDS=++;STRANDS2=34,0,0,34;RE=34 GT:DR:DV ./.:.:34 8 124084323 27322 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=17;END=74797339;STD_quant_start=2.588436;STD_quant_stop=1.516575;Kurtosis_quant_start=1.206806;Kurtosis_quant_stop=7.599552;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1058098190;STRANDS=+-;STRANDS2=8,3,8,3;RE=11 GT:DR:DV ./.:.:11 8 124819450 27323 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=17;END=65286182;STD_quant_start=0.316228;STD_quant_stop=0.316228;Kurtosis_quant_start=13.076595;Kurtosis_quant_stop=10.364993;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1047851906;STRANDS=--;STRANDS2=0,20,20,0;RE=20 GT:DR:DV ./.:.:20 8 125549099 27324 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=17;END=38067674;STD_quant_start=0.464420;STD_quant_stop=0.453743;Kurtosis_quant_start=112.896670;Kurtosis_quant_stop=68.996741;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1019903749;STRANDS=-+;STRANDS2=113,91,113,91;RE=204 GT:DR:DV ./.:.:204 8 126480843 27325 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=17;END=64043765;STD_quant_start=0.632456;STD_quant_stop=0.000000;Kurtosis_quant_start=3.326017;Kurtosis_quant_stop=12.000000;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1044948096;STRANDS=-+;STRANDS2=6,9,6,9;RE=15 GT:DR:DV ./.:.:15 8 128353289 27328 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=17;END=66250050;STD_quant_start=0.000000;STD_quant_stop=0.000000;Kurtosis_quant_start=15.831100;Kurtosis_quant_stop=16.202163;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1045281935;STRANDS=-+;STRANDS2=12,19,12,19;RE=31 GT:DR:DV ./.:.:31 8 130560518 27331 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=19;END=20019994;STD_quant_start=0.894427;STD_quant_stop=0.632456;Kurtosis_quant_start=3.937500;Kurtosis_quant_stop=8.999758;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1156119108;STRANDS=+-;STRANDS2=7,5,7,5;RE=12 GT:DR:DV ./.:.:12 8 131390649 27332 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=14;END=57066836;STD_quant_start=0.774597;STD_quant_stop=1.612452;Kurtosis_quant_start=2.286667;Kurtosis_quant_stop=9.801272;SVTYPE=TRA;SUPTYPE=SR;SVLEN=732822676;STRANDS=++;STRANDS2=13,0,0,13;RE=13 GT:DR:DV ./.:.:13 8 146301391 27354 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=19;END=20358150;STD_quant_start=0.447214;STD_quant_stop=0.447214;Kurtosis_quant_start=2.950321;Kurtosis_quant_stop=2.500073;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1140716391;STRANDS=++;STRANDS2=16,0,0,16;RE=16 GT:DR:DV ./.:.:16 9 35884434 27362 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=11;END=81872547;STD_quant_start=0.547723;STD_quant_stop=0.632456;Kurtosis_quant_start=2.909823;Kurtosis_quant_stop=5.515301;SVTYPE=TRA;SUPTYPE=SR;SVLEN=322738291;STRANDS=+-;STRANDS2=5,13,5,13;RE=18 GT:DR:DV ./.:.:18 9 90373007 27372 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=20;END=4082831;STD_quant_start=82.453623;STD_quant_stop=0.632456;Kurtosis_quant_start=1.497311;Kurtosis_quant_stop=5.416456;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1093134417;STRANDS=--;STRANDS2=0,13,13,0;RE=13 GT:DR:DV ./.:.:13 9 90375037 27373 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=20;END=4082847;STD_quant_start=137.662631;STD_quant_stop=0.894427;Kurtosis_quant_start=1.515312;Kurtosis_quant_stop=5.947796;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1093132403;STRANDS=++;STRANDS2=13,0,0,13;RE=13 GT:DR:DV ./.:.:13 9 97911309 27383 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=11;END=92876364;STD_quant_start=7.007139;STD_quant_stop=273.658546;Kurtosis_quant_start=2.076068;Kurtosis_quant_stop=-0.868388;SVTYPE=TRA;SUPTYPE=SR;SVLEN=271715233;STRANDS=-+;STRANDS2=7,8,7,8;RE=15 GT:DR:DV ./.:.:15 10 80478198 27452 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=16;END=61536323;STD_quant_start=0.547723;STD_quant_stop=0.836660;Kurtosis_quant_start=1.381065;Kurtosis_quant_stop=12.726655;SVTYPE=TRA;SUPTYPE=SR;SVLEN=710508093;STRANDS=-+;STRANDS2=7,11,7,11;RE=18 GT:DR:DV ./.:.:18 11 49883572 27509 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=MT;END=16570;STD_quant_start=1.732051;STD_quant_stop=261.014367;Kurtosis_quant_start=-0.718095;Kurtosis_quant_stop=-1.015104;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1229916520;STRANDS=++;STRANDS2=7,7,7,7;RE=14 GT:DR:DV ./.:.:14 12 169852 27561 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=20;END=62965513;STD_quant_start=2.198484;STD_quant_stop=0.645497;Kurtosis_quant_start=5.026639;Kurtosis_quant_stop=5.082510;SVTYPE=TRA;SUPTYPE=SR;SVLEN=830462560;STRANDS=++;STRANDS2=24,0,0,24;RE=24 GT:DR:DV ./.:.:24 12 56990097 27595 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=15;END=39994625;STD_quant_start=0.953463;STD_quant_stop=0.738549;Kurtosis_quant_start=0.094431;Kurtosis_quant_stop=10.569268;SVTYPE=TRA;SUPTYPE=SR;SVLEN=339378841;STRANDS=+-;STRANDS2=15,7,15,7;RE=22 GT:DR:DV ./.:.:22 13 44069839 27628 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=15;END=41871537;STD_quant_start=0.447214;STD_quant_stop=0.000000;Kurtosis_quant_start=6.953256;Kurtosis_quant_stop=11.984021;SVTYPE=TRA;SUPTYPE=SR;SVLEN=220323116;STRANDS=++;STRANDS2=17,0,0,17;RE=17 GT:DR:DV ./.:.:17 14 50256582 27677 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=17;END=64042266;STD_quant_start=0.447214;STD_quant_stop=0.591608;Kurtosis_quant_start=23.699314;Kurtosis_quant_stop=23.145498;SVTYPE=TRA;SUPTYPE=SR;SVLEN=314024369;STRANDS=+-;STRANDS2=21,19,21,19;RE=40 GT:DR:DV ./.:.:40 14 57212496 27678 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=17;END=74808616;STD_quant_start=0.365148;STD_quant_stop=0.632456;Kurtosis_quant_start=24.965685;Kurtosis_quant_stop=25.717330;SVTYPE=TRA;SUPTYPE=SR;SVLEN=317834805;STRANDS=+-;STRANDS2=15,15,15,15;RE=30 GT:DR:DV ./.:.:30 14 68974333 27683 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=15;END=47698394;STD_quant_start=3.847077;STD_quant_stop=40.820338;Kurtosis_quant_start=7.916730;Kurtosis_quant_stop=3.713294;SVTYPE=TRA;SUPTYPE=SR;SVLEN=86074601;STRANDS=+-;STRANDS2=5,6,5,6;RE=11 GT:DR:DV ./.:.:11 18 52209137 27875 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=GL000207.1;END=411;STD_quant_start=0.632456;STD_quant_stop=0.447214;Kurtosis_quant_start=9.079439;Kurtosis_quant_stop=10.947426;SVTYPE=TRA;SUPTYPE=SR;SVLEN=462126181;STRANDS=--;STRANDS2=0,15,15,0;RE=15 GT:DR:DV ./.:.:15 20 23968764 27937 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=22;END=21483967;STD_quant_start=257.997674;STD_quant_stop=270.794941;Kurtosis_quant_start=-1.751923;Kurtosis_quant_stop=-1.139940;SVTYPE=TRA;SUPTYPE=SR;SVLEN=108672618;STRANDS=++;STRANDS2=9,7,7,9;RE=16 GT:DR:DV ./.:.:16 21 9825438 27980 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=GL000220.1;END=151457;STD_quant_start=2.049390;STD_quant_stop=37.893271;Kurtosis_quant_start=2.122166;Kurtosis_quant_stop=1.526083;SVTYPE=TRA;SUPTYPE=SR;SVLEN=306799953;STRANDS=-+;STRANDS2=10,7,10,7;RE=17 GT:DR:DV ./.:.:17 21 9826545 27981 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=GL000220.1;END=108619;STD_quant_start=190.045035;STD_quant_stop=200.712673;Kurtosis_quant_start=-0.363607;Kurtosis_quant_stop=-0.314402;SVTYPE=TRA;SUPTYPE=SR;SVLEN=306756008;STRANDS=+-;STRANDS2=19,33,19,33;RE=52 GT:DR:DV ./.:.:52 21 9826315 27982 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=GL000220.1;END=152334;STD_quant_start=173.015942;STD_quant_stop=162.579807;Kurtosis_quant_start=1.013385;Kurtosis_quant_stop=1.113740;SVTYPE=TRA;SUPTYPE=SR;SVLEN=306799953;STRANDS=-+;STRANDS2=23,40,23,40;RE=63 GT:DR:DV ./.:.:63 21 9827574 27983 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=GL000220.1;END=153624;STD_quant_start=32.489998;STD_quant_stop=68.881783;Kurtosis_quant_start=2.102826;Kurtosis_quant_stop=-0.020818;SVTYPE=TRA;SUPTYPE=SR;SVLEN=306799984;STRANDS=+-;STRANDS2=6,11,6,11;RE=17 GT:DR:DV ./.:.:17 GL000229.1 2 28131 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=GL000231.1;END=25386;STD_quant_start=9.633276;STD_quant_stop=25.651511;Kurtosis_quant_start=8.670200;Kurtosis_quant_stop=4.407164;SVTYPE=TRA;SUPTYPE=SR;SVLEN=46297;STRANDS=-+;STRANDS2=6,6,6,6;RE=12 GT:DR:DV ./.:.:12 GL000229.1 2000 28132 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=GL000231.1;END=27384;STD_quant_start=2.607681;STD_quant_stop=2.190890;Kurtosis_quant_start=1.062245;Kurtosis_quant_stop=1.070177;SVTYPE=TRA;SUPTYPE=SR;SVLEN=46297;STRANDS=-+;STRANDS2=11,8,11,8;RE=19 GT:DR:DV ./.:.:19 GL000231.1 1922 28134 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=GL000232.1;END=40574;STD_quant_start=83.617582;STD_quant_stop=76.639415;Kurtosis_quant_start=-0.460322;Kurtosis_quant_stop=0.452999;SVTYPE=TRA;SUPTYPE=SR;SVLEN=678770;STRANDS=-+;STRANDS2=8,12,8,12;RE=20 GT:DR:DV ./.:.:20 GL000216.1 70400 28171 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=GL000225.1;END=200634;STD_quant_start=360.347055;STD_quant_stop=360.376470;Kurtosis_quant_start=-0.153609;Kurtosis_quant_stop=-0.049174;SVTYPE=TRA;SUPTYPE=SR;SVLEN=2325915;STRANDS=++;STRANDS2=10,1,1,10;RE=11 GT:DR:DV ./.:.:11 GL000216.1 172294 28173 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=GL000225.1;END=99428;STD_quant_start=1.140175;STD_quant_stop=3.316625;Kurtosis_quant_start=3.378878;Kurtosis_quant_stop=4.077729;SVTYPE=TRA;SUPTYPE=SR;SVLEN=2122815;STRANDS=++;STRANDS2=13,0,0,13;RE=13 GT:DR:DV ./.:.:13 GL000205.1 28773 28174 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=GL000195.1;END=91761;STD_quant_start=315.524326;STD_quant_stop=301.644824;Kurtosis_quant_start=-0.623733;Kurtosis_quant_stop=-0.500722;SVTYPE=TRA;SUPTYPE=SR;SVLEN=780922;STRANDS=--;STRANDS2=5,8,8,5;RE=13 GT:DR:DV ./.:.:13 GL000219.1 0 28183 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=GL000224.1;END=176160;STD_quant_start=0.894427;STD_quant_stop=14.785128;Kurtosis_quant_start=1.686500;Kurtosis_quant_stop=1.810764;SVTYPE=TRA;SUPTYPE=SR;SVLEN=356358;STRANDS=-+;STRANDS2=8,11,8,11;RE=19 GT:DR:DV ./.:.:19 GL000219.1 3550 28184 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=GL000224.1;END=179694;STD_quant_start=2.345208;STD_quant_stop=1.378405;Kurtosis_quant_start=2.015667;Kurtosis_quant_stop=1.389665;SVTYPE=TRA;SUPTYPE=SR;SVLEN=356342;STRANDS=-+;STRANDS2=10,11,10,11;RE=21 GT:DR:DV ./.:.:21 1 9121450 28220 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=14;END=93712486;STD_quant_start=49.423679;STD_quant_stop=2.073644;Kurtosis_quant_start=2.633422;Kurtosis_quant_stop=2.776762;SVTYPE=TRA;SUPTYPE=SR;SVLEN=-2010427081;STRANDS=--;STRANDS2=0,11,11,0;RE=11 GT:DR:DV ./.:.:11 3 111274086 28233 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=8;END=128533830;STD_quant_start=0.000000;STD_quant_stop=0.000000;Kurtosis_quant_start=17.721037;Kurtosis_quant_stop=139.308877;SVTYPE=TRA;SUPTYPE=SR;SVLEN=917610440;STRANDS=--;STRANDS2=0,288,288,0;RE=288 GT:DR:DV ./.:.:288 3 187728890 28237 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=6;END=93096669;STD_quant_start=0.000000;STD_quant_stop=0.000000;Kurtosis_quant_start=12.995184;Kurtosis_quant_stop=6.333333;SVTYPE=TRA;SUPTYPE=SR;SVLEN=475462745;STRANDS=--;STRANDS2=0,16,16,0;RE=16 GT:DR:DV ./.:.:16 6 24683988 28243 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=22;END=32928561;STD_quant_start=0.000000;STD_quant_stop=0.000000;Kurtosis_quant_start=22.295092;Kurtosis_quant_stop=3.635628;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1775447333;STRANDS=-+;STRANDS2=25,2,25,2;RE=27 GT:DR:DV ./.:.:27 7 81789168 28254 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=10;END=60902927;STD_quant_start=0.000000;STD_quant_stop=0.968246;Kurtosis_quant_start=6.206987;Kurtosis_quant_stop=-0.674215;SVTYPE=TRA;SUPTYPE=SR;SVLEN=425832875;STRANDS=++;STRANDS2=32,0,0,32;RE=32 GT:DR:DV ./.:.:32 8 80012226 28262 N . PASS PRECISE;SVMETHOD=Snifflesv1.0.2;CHR2=X;END=93874557;STD_quant_start=0.000000;STD_quant_stop=0.547723;Kurtosis_quant_start=11.944577;Kurtosis_quant_stop=15.212678;SVTYPE=TRA;SUPTYPE=SR;SVLEN=1502114927;STRANDS=-+;STRANDS2=18,2,18,2;RE=20 GT:DR:DV ./.:.:20