#=GENOME_DIFF	1.0
#=TITLE	D30
#=CREATED	15:53:03 03 Mar 2017
#=PROGRAM	breseq 0.29.0 
#=COMMAND	breseq -j 2 -r /var/genomes/g2d_mirror/Staphylococcus_aureus_subsp_aureus_USA300_FPR3757/ASM1346v1_genomic.gbff -n D30 -o /var/www/ngs/solomon/breseq/D30 --no-junction-prediction /var/ngs/rnaseq/raw/solomon/RNAseq_USA300_Eleni/OtA1596_D30A0.5_R1_.fastq
#=REFSEQ	/var/genomes/g2d_mirror/Staphylococcus_aureus_subsp_aureus_USA300_FPR3757/ASM1346v1_genomic.gbff
#=READSEQ	/var/ngs/rnaseq/raw/solomon/RNAseq_USA300_Eleni/OtA1596_D30A0.5_R1_.fastq
#=CONVERTED-BASES	626360600
#=CONVERTED-READS	6263606
#=INPUT-BASES	626369100
#=INPUT-READS	6263691
#=MAPPED-BASES	436654088
#=MAPPED-READS	4403181
DEL	1	5	NC_007790	1	3125
DEL	2	6	NC_007791	1	4439
DEL	3	7	NC_007792	1	37136
DEL	4	8	NC_007793	1	2872769
MC	5	.	NC_007790	1	3125	0	0	left_inside_cov=0	left_outside_cov=NA	right_inside_cov=0	right_outside_cov=NA
MC	6	.	NC_007791	1	4439	0	0	left_inside_cov=0	left_outside_cov=NA	right_inside_cov=0	right_outside_cov=NA
MC	7	.	NC_007792	1	37136	0	0	left_inside_cov=0	left_outside_cov=NA	right_inside_cov=0	right_outside_cov=NA
MC	8	.	NC_007793	1	2872769	0	0	left_inside_cov=0	left_outside_cov=NA	right_inside_cov=0	right_outside_cov=NA