#=GENOME_DIFF	1.0
#=TITLE	D3A
#=CREATED	14:54:33 03 Mar 2017
#=PROGRAM	breseq 0.29.0 
#=COMMAND	breseq -j 14 -r /var/genomes/g2d_mirror/Staphylococcus_aureus_subsp_aureus_USA300_FPR3757/ASM1346v1_genomic.gbff -n D3A -o /home/anne/PROJECTS/Solomon/2017-03_BreSeq --no-junction-prediction /var/ngs/rnaseq/raw/solomon/RNAseq_USA300_Eleni/OtA1576_D3A0.5_R1_.fastq
#=REFSEQ	/var/genomes/g2d_mirror/Staphylococcus_aureus_subsp_aureus_USA300_FPR3757/ASM1346v1_genomic.gbff
#=READSEQ	/var/ngs/rnaseq/raw/solomon/RNAseq_USA300_Eleni/OtA1576_D3A0.5_R1_.fastq
#=CONVERTED-BASES	665448900
#=CONVERTED-READS	6654489
#=INPUT-BASES	665461700
#=INPUT-READS	6654617
#=MAPPED-BASES	399875057
#=MAPPED-READS	4038746
DEL	1	2567	NC_007790	1	3125
DEL	2	2568	NC_007791	1	4439
DEL	3	2569	NC_007792	1	37136
SNP	4	811	NC_007793	1425	C
SNP	5	812	NC_007793	5010	G
SNP	6	813	NC_007793	7282	C
SNP	7	814	NC_007793	24199	T
SNP	8	816	NC_007793	34179	A
SNP	9	817	NC_007793	34324	C
SNP	10	821	NC_007793	36152	A
SNP	11	863	NC_007793	62467	G
SNP	12	864	NC_007793	62522	A
SNP	13	865	NC_007793	62533	A
SNP	14	866	NC_007793	62578	A
DEL	15	867	NC_007793	67917	1	repeat_length=1	repeat_new_copies=5	repeat_ref_copies=6	repeat_seq=A
SNP	16	868	NC_007793	67926	C
SNP	17	869	NC_007793	76361	G
SNP	18	870	NC_007793	76402	T
SNP	19	871	NC_007793	76412	G
SNP	20	872	NC_007793	76418	A
SNP	21	873	NC_007793	76436	G
DEL	22	875,876,877,878	NC_007793	90315	4	repeat_length=2	repeat_new_copies=6	repeat_ref_copies=8	repeat_seq=TA
SNP	23	879	NC_007793	95813	C
SNP	24	880	NC_007793	97315	T
SNP	25	881	NC_007793	99032	C
SNP	26	882	NC_007793	99367	T
SNP	27	883	NC_007793	105836	G
SNP	28	884	NC_007793	115248	G
SNP	29	885	NC_007793	125406	T
DEL	30	890	NC_007793	129911	1	repeat_length=1	repeat_new_copies=5	repeat_ref_copies=6	repeat_seq=T
SNP	31	892	NC_007793	141817	A
SNP	32	895	NC_007793	150376	T
SNP	33	906	NC_007793	178354	G
SNP	34	907	NC_007793	205448	C
SNP	35	908	NC_007793	214514	C
DEL	36	910	NC_007793	218784	1	repeat_length=1	repeat_new_copies=5	repeat_ref_copies=6	repeat_seq=G
SNP	37	912	NC_007793	234362	A
SNP	38	913	NC_007793	240358	A
SNP	39	914	NC_007793	243550	A
DEL	40	915	NC_007793	243830	1	repeat_length=1	repeat_new_copies=7	repeat_ref_copies=8	repeat_seq=T
SNP	41	919	NC_007793	264788	T
SNP	42	920	NC_007793	267106	A
SNP	43	941	NC_007793	269528	G
SNP	44	942	NC_007793	270510	C
SNP	45	943	NC_007793	271976	C
SNP	46	944	NC_007793	275084	A
SNP	47	945	NC_007793	277058	T
SNP	48	946	NC_007793	291848	G
INS	49	947	NC_007793	296264	G	repeat_length=1	repeat_new_copies=6	repeat_ref_copies=5	repeat_seq=G
SNP	50	949	NC_007793	304266	A
SNP	51	952	NC_007793	311367	G
SNP	52	953	NC_007793	316573	G
SNP	53	964	NC_007793	328214	G
SNP	54	965	NC_007793	345030	G
SNP	55	966	NC_007793	349857	A
SNP	56	967	NC_007793	356294	C
SNP	57	968	NC_007793	372740	C
SNP	58	969	NC_007793	374582	G
SNP	59	970	NC_007793	376057	T
SNP	60	971	NC_007793	376231	G
SNP	61	972	NC_007793	380670	T
SNP	62	973	NC_007793	381188	G
SNP	63	975	NC_007793	402035	G
SNP	64	976	NC_007793	402167	A
SNP	65	977	NC_007793	402447	T
SNP	66	978	NC_007793	407945	T
SNP	67	979	NC_007793	414724	T
SNP	68	980	NC_007793	415546	A
SNP	69	981	NC_007793	429073	T
SNP	70	982	NC_007793	429734	A
SNP	71	988	NC_007793	444307	G
SNP	72	989	NC_007793	444723	A
SNP	73	990	NC_007793	454603	A
DEL	74	2835	NC_007793	463930	816	between=repeat_region
SNP	75	997	NC_007793	479868	C
SNP	76	1004	NC_007793	480476	C
SNP	77	1010	NC_007793	495541	T
SNP	78	1011	NC_007793	501449	A
SNP	79	1012	NC_007793	502496	A
SNP	80	1013	NC_007793	503675	T
SNP	81	1016	NC_007793	508670	G
SNP	82	1017	NC_007793	509629	C
DEL	83	2861	NC_007793	512783	5436	between=repeat_region
SNP	84	1019	NC_007793	519306	C
SNP	85	1022	NC_007793	521750	G
SNP	86	1023	NC_007793	524987	T
DEL	87	1024	NC_007793	525622	1	repeat_length=1	repeat_new_copies=7	repeat_ref_copies=8	repeat_seq=A
SNP	88	1025	NC_007793	525978	G
SNP	89	1027	NC_007793	529026	C
SNP	90	1028	NC_007793	529067	T
SNP	91	1030	NC_007793	542171	C
SNP	92	1031	NC_007793	542249	G
SNP	93	1032	NC_007793	543897	A
SNP	94	1033	NC_007793	545208	T
SNP	95	1044	NC_007793	555081	T
SNP	96	1048	NC_007793	571607	G
SNP	97	1052	NC_007793	591811	G
DEL	98	1053	NC_007793	593859	1
SNP	99	1054	NC_007793	595026	T
SNP	100	1059	NC_007793	612922	T
SUB	101	1060,1061	NC_007793	612932	2	TG
SNP	102	1062	NC_007793	612937	T
SNP	103	1063	NC_007793	612961	G
INS	104	1064,1065,1066	NC_007793	612963	TTC
SNP	105	1067	NC_007793	612964	T
SNP	106	1068	NC_007793	612970	C
SNP	107	1069	NC_007793	612973	C
SNP	108	1070	NC_007793	612988	A
SUB	109	1071,1072,1073	NC_007793	612997	3	TTC
SNP	110	1074	NC_007793	613013	T
SNP	111	1075	NC_007793	613015	C
SUB	112	1076,1077,1078,1079,1080,1081	NC_007793	613021	6	CAATGA
SNP	113	1082	NC_007793	613036	T
SNP	114	1085	NC_007793	613064	G
SUB	115	1086,1087,1088,1089,1090	NC_007793	613066	5	TAGTG
SUB	116	1091,1092	NC_007793	613075	2	TA
SUB	117	1093,1094,1095	NC_007793	613078	3	CAC
SNP	118	1096	NC_007793	613082	T
SUB	119	1097,1098,1099,1100	NC_007793	613084	4	AAAA
SNP	120	1101	NC_007793	613099	T
SNP	121	1102	NC_007793	613114	G
SNP	122	1103	NC_007793	613117	T
SNP	123	1104	NC_007793	613318	A
SNP	124	1116	NC_007793	613454	G
SNP	125	1120	NC_007793	613472	G
SNP	126	1122	NC_007793	613486	T
SNP	127	1123	NC_007793	613490	G
SNP	128	1124	NC_007793	613495	C
SNP	129	1126	NC_007793	613508	G
DEL	130	1154	NC_007793	613711	1
SNP	131	1164	NC_007793	616726	G
INS	132	1165,1166,1167	NC_007793	616728	TTC
SNP	133	1168	NC_007793	616729	T
SNP	134	1169	NC_007793	616735	C
SUB	135	1170,1171	NC_007793	616737	2	GC
SNP	136	1172	NC_007793	616745	G
SNP	137	1173	NC_007793	616757	T
SNP	138	1174	NC_007793	616759	C
SNP	139	1175	NC_007793	616763	T
SNP	140	1176	NC_007793	616765	T
SNP	141	1177	NC_007793	616778	T
SNP	142	1178	NC_007793	616780	C
SNP	143	1179	NC_007793	616783	A
SUB	144	1180,1181,1182,1183,1184,1185	NC_007793	616786	6	CAATGA
SNP	145	1200	NC_007793	617707	C
SNP	146	1209	NC_007793	617882	G
SNP	147	1217	NC_007793	617936	G
SNP	148	1218	NC_007793	617944	C
SNP	149	1219	NC_007793	617954	G
SNP	150	1220	NC_007793	617968	T
SNP	151	1221	NC_007793	617972	G
SNP	152	1222	NC_007793	617974	G
SNP	153	1223	NC_007793	617989	T
SNP	154	1224	NC_007793	618001	T
SNP	155	1225	NC_007793	618008	G
SNP	156	1226	NC_007793	618016	C
SNP	157	1230	NC_007793	618040	T
SNP	158	1231	NC_007793	618044	G
SNP	159	1232	NC_007793	618062	G
SUB	160	1246,1247	NC_007793	621817	2	CG
SNP	161	1248	NC_007793	621829	T
SNP	162	1250	NC_007793	621836	G
SNP	163	1251	NC_007793	621854	G
SNP	164	1252	NC_007793	621865	T
SNP	165	1266	NC_007793	621926	G
SNP	166	1269	NC_007793	621944	G
SNP	167	1272	NC_007793	621961	T
SNP	168	1279	NC_007793	621998	G
SNP	169	1298	NC_007793	629078	G
SNP	170	1299	NC_007793	635213	G
SNP	171	1300	NC_007793	639348	G
SNP	172	1302	NC_007793	646599	C
SNP	173	1303	NC_007793	648732	G
SNP	174	1304	NC_007793	650151	A
SUB	175	1305,1306	NC_007793	656344	2	TT
SNP	176	1307	NC_007793	656348	T
SNP	177	1308	NC_007793	658463	T
SNP	178	1309	NC_007793	658465	A
SNP	179	1310	NC_007793	659368	A
SNP	180	1311	NC_007793	662424	T
SNP	181	1312	NC_007793	673027	T
SNP	182	1314	NC_007793	674513	T
SNP	183	1317	NC_007793	689949	C
SNP	184	1323	NC_007793	699838	T
SNP	185	1324	NC_007793	700471	T
SNP	186	1326	NC_007793	710124	G
SNP	187	1328	NC_007793	714167	A
SNP	188	1332	NC_007793	716517	A
SNP	189	1333	NC_007793	721388	C
SNP	190	1334	NC_007793	725902	A
SNP	191	1335	NC_007793	725905	C
SNP	192	1337	NC_007793	730141	G
INS	193	1338	NC_007793	730913	G
SNP	194	1342	NC_007793	735175	T
SNP	195	1343	NC_007793	735182	T
SNP	196	1344	NC_007793	735887	A
SNP	197	1351	NC_007793	747922	T
SNP	198	1353	NC_007793	748914	G
INS	199	1354	NC_007793	754285	A	repeat_length=1	repeat_new_copies=7	repeat_ref_copies=6	repeat_seq=A
SNP	200	1355	NC_007793	757384	T
SNP	201	1356	NC_007793	757599	C
SNP	202	1357	NC_007793	759621	G
SNP	203	1358	NC_007793	769854	C
SNP	204	1359	NC_007793	774306	T
SNP	205	1362	NC_007793	780361	T
SNP	206	1365	NC_007793	785958	A
SNP	207	1366	NC_007793	787567	C
SNP	208	1367	NC_007793	789781	A
SNP	209	1369	NC_007793	796278	G
DEL	210	1370	NC_007793	800175	1	repeat_length=1	repeat_new_copies=6	repeat_ref_copies=7	repeat_seq=A
SNP	211	1379	NC_007793	806587	C
SNP	212	1380	NC_007793	807173	G
SNP	213	1382	NC_007793	824939	A
SNP	214	1383	NC_007793	827290	A
SNP	215	1389	NC_007793	828711	T
SNP	216	1390	NC_007793	829334	T
SNP	217	1392	NC_007793	831451	G
SNP	218	1393	NC_007793	835887	G
SNP	219	1394	NC_007793	837108	T
DEL	220	1395	NC_007793	838047	1	repeat_length=1	repeat_new_copies=6	repeat_ref_copies=7	repeat_seq=T
SNP	221	1397	NC_007793	842227	A
SNP	222	1399	NC_007793	853311	A
DEL	223	1400	NC_007793	856210	1	repeat_length=1	repeat_new_copies=7	repeat_ref_copies=8	repeat_seq=T
SNP	224	1403	NC_007793	861284	G
SNP	225	1411	NC_007793	862125	G
SNP	226	1412	NC_007793	867908	C
SNP	227	1416	NC_007793	876937	C
SNP	228	1417	NC_007793	877041	T
SUB	229	1418,1419	NC_007793	895527	2	G
SNP	230	1420	NC_007793	895560	C
SNP	231	1421	NC_007793	895570	A
SNP	232	1432	NC_007793	903330	G
SNP	233	1433	NC_007793	905439	A
SNP	234	1434	NC_007793	906507	C
SNP	235	1435	NC_007793	918380	T
SNP	236	1436	NC_007793	919052	G
SNP	237	1441	NC_007793	930525	A
SNP	238	1442	NC_007793	933955	T
SNP	239	1450	NC_007793	940252	A
SNP	240	1454	NC_007793	952565	C
SNP	241	1457	NC_007793	961879	T
SNP	242	1459	NC_007793	967086	G
SNP	243	1461	NC_007793	973232	G
DEL	244	1462	NC_007793	973711	1
SNP	245	1463	NC_007793	979291	A
SNP	246	1464	NC_007793	984022	G
SNP	247	1467	NC_007793	993017	C
SNP	248	1469	NC_007793	1013607	A
SNP	249	1471	NC_007793	1022294	A
SNP	250	1472	NC_007793	1027238	T
SNP	251	1473	NC_007793	1033580	A
SNP	252	1474	NC_007793	1045185	A
SNP	253	1475	NC_007793	1046861	C
SNP	254	1485	NC_007793	1054642	A
SNP	255	1486	NC_007793	1055844	C
SNP	256	1487	NC_007793	1058202	C
SNP	257	1488	NC_007793	1062485	A
SNP	258	1491	NC_007793	1069320	G
SNP	259	1492	NC_007793	1069644	T
SNP	260	1493	NC_007793	1074815	A
SNP	261	1503	NC_007793	1090055	C
SNP	262	1504	NC_007793	1090283	A
SNP	263	1505	NC_007793	1092439	C
SNP	264	1507	NC_007793	1099776	A
SNP	265	1528	NC_007793	1101207	A
SNP	266	1529	NC_007793	1101217	A
SNP	267	1530	NC_007793	1101223	G
SNP	268	1531	NC_007793	1101226	C
SNP	269	1532	NC_007793	1101229	A
SNP	270	1533	NC_007793	1101232	T
SNP	271	1534	NC_007793	1101235	T
SNP	272	1535	NC_007793	1101237	C
SUB	273	1536,1537	NC_007793	1101241	2	CT
SUB	274	1538,1539,1540	NC_007793	1101244	3	ATT
SNP	275	1541	NC_007793	1101251	A
SNP	276	1542	NC_007793	1101256	A
SNP	277	1543	NC_007793	1101268	T
SNP	278	1544	NC_007793	1101274	A
SNP	279	1545	NC_007793	1101283	A
SNP	280	1546	NC_007793	1101301	T
SNP	281	1547	NC_007793	1101304	A
SNP	282	1548	NC_007793	1101310	A
SNP	283	1549	NC_007793	1101316	T
SUB	284	1550,1551	NC_007793	1101318	2	AC
SNP	285	1552	NC_007793	1101321	G
SNP	286	1553	NC_007793	1101325	A
SNP	287	1554	NC_007793	1101328	A
SNP	288	1555	NC_007793	1101334	G
SNP	289	1579	NC_007793	1112481	A
SNP	290	1581	NC_007793	1113988	A
SNP	291	1582	NC_007793	1115164	G
SNP	292	1583	NC_007793	1116591	G
SNP	293	1588	NC_007793	1134908	G
SNP	294	1589	NC_007793	1136229	G
SNP	295	1590	NC_007793	1140030	T
SNP	296	1591	NC_007793	1143651	C
SNP	297	1598	NC_007793	1153368	G
SNP	298	1599	NC_007793	1154397	G
SNP	299	1600	NC_007793	1154522	C
SNP	300	1601	NC_007793	1154550	T
SNP	301	1602	NC_007793	1154556	G
SNP	302	1603	NC_007793	1154571	G
SNP	303	1604	NC_007793	1154573	T
SNP	304	1605	NC_007793	1154577	G
SNP	305	1606	NC_007793	1154583	C
SNP	306	1607	NC_007793	1154585	C
SNP	307	1608	NC_007793	1154607	A
SNP	308	1609	NC_007793	1158763	C
SNP	309	1610	NC_007793	1165923	G
SNP	310	1612	NC_007793	1167649	G
SNP	311	1613	NC_007793	1167775	A
SNP	312	1614	NC_007793	1168149	G
SNP	313	1615	NC_007793	1170956	T
SNP	314	1616	NC_007793	1171616	T
SNP	315	1622	NC_007793	1179827	T
SNP	316	1626	NC_007793	1185383	T
SNP	317	1629	NC_007793	1193069	G
INS	318	1630	NC_007793	1193217	T	repeat_length=1	repeat_new_copies=8	repeat_ref_copies=7	repeat_seq=T
SNP	319	1632	NC_007793	1195737	A
SNP	320	1633	NC_007793	1196186	A
SNP	321	1634	NC_007793	1197225	A
SNP	322	1635	NC_007793	1203842	C
SNP	323	1638	NC_007793	1215913	C
SNP	324	1665	NC_007793	1251223	T
SNP	325	1672	NC_007793	1267921	G
SNP	326	1673	NC_007793	1269542	T
SNP	327	1674	NC_007793	1272003	C
SNP	328	1677	NC_007793	1277641	A
SNP	329	1682	NC_007793	1286986	G
SNP	330	1686	NC_007793	1295497	G
SNP	331	1694	NC_007793	1316107	G
SNP	332	1697	NC_007793	1333945	T
SNP	333	1698	NC_007793	1338438	A
SNP	334	1701	NC_007793	1357593	A
SNP	335	1705	NC_007793	1363207	T
INS	336	1710	NC_007793	1370775	T	repeat_length=1	repeat_new_copies=6	repeat_ref_copies=5	repeat_seq=T
SNP	337	1711	NC_007793	1374405	C
DEL	338	1712,1713,1714,1715,1716,1717,1718	NC_007793	1381407	7
SNP	339	1719	NC_007793	1382463	T
SNP	340	1723	NC_007793	1423567	A
INS	341	1724	NC_007793	1428845	A	repeat_length=1	repeat_new_copies=7	repeat_ref_copies=6	repeat_seq=A
SNP	342	1725	NC_007793	1433527	T
SNP	343	1726	NC_007793	1440480	T
SNP	344	1727	NC_007793	1442893	C
SNP	345	1728	NC_007793	1445143	T
SNP	346	1739	NC_007793	1449828	A
SNP	347	1741	NC_007793	1453525	G
SNP	348	1742	NC_007793	1453835	C
SNP	349	1744	NC_007793	1458928	C
SNP	350	1760	NC_007793	1462539	A
SNP	351	1761	NC_007793	1490274	C
SNP	352	1762	NC_007793	1495206	C
SNP	353	1763	NC_007793	1496033	A
SNP	354	1764	NC_007793	1499109	T
SNP	355	1765	NC_007793	1499394	A
SNP	356	1766	NC_007793	1499927	G
SNP	357	1768	NC_007793	1501031	C
DEL	358	1775	NC_007793	1519175	1
SNP	359	1776	NC_007793	1520645	T
SNP	360	1777	NC_007793	1530657	T
SNP	361	1778	NC_007793	1531501	C
SNP	362	1779	NC_007793	1533003	G
SNP	363	1780	NC_007793	1533312	T
SNP	364	1781	NC_007793	1534172	T
SNP	365	1782	NC_007793	1534963	T
SNP	366	1783	NC_007793	1537347	T
SNP	367	1784	NC_007793	1541574	A
SNP	368	1785	NC_007793	1544669	A
SNP	369	1786	NC_007793	1578194	G
SNP	370	1787	NC_007793	1578210	C
SNP	371	1788	NC_007793	1578227	A
SNP	372	1789	NC_007793	1578244	A
SNP	373	1790	NC_007793	1578362	A
SNP	374	1791	NC_007793	1578410	C
SNP	375	1792	NC_007793	1578476	T
SNP	376	1793	NC_007793	1578485	G
SUB	377	1794,1795,1796	NC_007793	1578488	3	CGT
SNP	378	1797	NC_007793	1578544	A
SNP	379	1798	NC_007793	1578557	G
SNP	380	1799	NC_007793	1578574	C
SNP	381	1800	NC_007793	1578590	A
SNP	382	1801	NC_007793	1578598	A
SNP	383	1802	NC_007793	1578686	G
SNP	384	1803	NC_007793	1578771	T
SNP	385	1804	NC_007793	1578785	T
SNP	386	1805	NC_007793	1578801	C
SNP	387	1806	NC_007793	1578853	G
SNP	388	1807	NC_007793	1578951	A
SNP	389	1808	NC_007793	1578958	G
SNP	390	1809	NC_007793	1578993	A
SNP	391	1810	NC_007793	1579043	A
SNP	392	1811	NC_007793	1579182	A
SNP	393	1812	NC_007793	1579248	T
SNP	394	1814	NC_007793	1579335	G
SNP	395	1815	NC_007793	1579338	G
SNP	396	1816	NC_007793	1579374	T
SNP	397	1817	NC_007793	1579396	T
SNP	398	1818	NC_007793	1579411	A
SNP	399	1819	NC_007793	1579416	A
SUB	400	1820,1821,1822	NC_007793	1579425	3	TTG
SNP	401	1823	NC_007793	1579434	G
SNP	402	1824	NC_007793	1579467	A
SNP	403	1825	NC_007793	1579515	T
SUB	404	1826,1827	NC_007793	1579527	2	TG
SNP	405	1828	NC_007793	1579532	C
SNP	406	1829	NC_007793	1579634	G
SNP	407	1830	NC_007793	1579638	T
SNP	408	1831	NC_007793	1579641	G
SNP	409	1832	NC_007793	1579818	G
SNP	410	1847	NC_007793	1579936	C
SNP	411	1849	NC_007793	1579978	C
SNP	412	1850	NC_007793	1580274	C
SUB	413	1851,1852	NC_007793	1580299	2	TA
SNP	414	1853	NC_007793	1580638	A
SNP	415	1854	NC_007793	1580674	G
SNP	416	1855	NC_007793	1580695	A
SNP	417	1856	NC_007793	1580698	A
SNP	418	1857	NC_007793	1580734	T
SNP	419	1858	NC_007793	1580737	T
SNP	420	1859	NC_007793	1580743	C
SUB	421	1860,1861	NC_007793	1580758	2	CA
SNP	422	1862	NC_007793	1586582	A
SNP	423	1863	NC_007793	1586594	T
SNP	424	1864	NC_007793	1586597	A
SNP	425	1865	NC_007793	1586615	T
SUB	426	1866,1867	NC_007793	1589875	2	CG
SNP	427	1868	NC_007793	1589898	G
SNP	428	1869	NC_007793	1589916	A
SNP	429	1870	NC_007793	1589937	C
SNP	430	1871	NC_007793	1589939	G
SNP	431	1872	NC_007793	1589942	T
SNP	432	1873	NC_007793	1589954	C
SNP	433	1874	NC_007793	1589996	A
SNP	434	1875	NC_007793	1590050	T
SNP	435	1876	NC_007793	1590116	C
SNP	436	1877	NC_007793	1590197	A
SNP	437	1878	NC_007793	1590272	A
SNP	438	1879	NC_007793	1590287	T
SUB	439	1880,1881	NC_007793	1590291	2	TC
SNP	440	1882	NC_007793	1590311	G
SNP	441	1883	NC_007793	1590340	G
SNP	442	1884	NC_007793	1590361	T
SNP	443	1885	NC_007793	1590369	C
SNP	444	1886	NC_007793	1590403	G
SNP	445	1887	NC_007793	1590408	C
SNP	446	1888	NC_007793	1590447	G
SNP	447	1889	NC_007793	1590508	T
SNP	448	1890	NC_007793	1590639	T
SUB	449	1891,1892	NC_007793	1590662	2	TT
SNP	450	1893	NC_007793	1590674	C
INS	451	1894	NC_007793	1593171	T	repeat_length=1	repeat_new_copies=7	repeat_ref_copies=6	repeat_seq=T
SNP	452	1895	NC_007793	1593380	C
SNP	453	1896	NC_007793	1598172	G
SNP	454	1897	NC_007793	1602262	C
SNP	455	1898	NC_007793	1608421	C
SNP	456	1901	NC_007793	1618244	C
SNP	457	1902	NC_007793	1620270	G
SNP	458	1903	NC_007793	1622675	T
SNP	459	1904	NC_007793	1624502	C
SNP	460	1906	NC_007793	1627860	C
SNP	461	1907	NC_007793	1628171	T
SNP	462	1908	NC_007793	1630832	T
SNP	463	1909	NC_007793	1630876	T
SNP	464	1910	NC_007793	1631061	T
SNP	465	1911	NC_007793	1631153	A
SNP	466	1912	NC_007793	1631164	G
SNP	467	1913	NC_007793	1631232	G
SNP	468	1914	NC_007793	1631245	G
SNP	469	1915	NC_007793	1631272	G
SNP	470	1916	NC_007793	1631278	T
SNP	471	1917	NC_007793	1631368	T
SNP	472	1918	NC_007793	1631540	T
SNP	473	1919	NC_007793	1631629	G
SNP	474	1920	NC_007793	1631843	C
SNP	475	1921	NC_007793	1631930	A
SNP	476	1922	NC_007793	1632043	C
SNP	477	1923	NC_007793	1632325	T
SNP	478	1924	NC_007793	1632327	C
SUB	479	1925,1926	NC_007793	1632332	2	AG
SNP	480	1927	NC_007793	1632335	A
SUB	481	1928,1929	NC_007793	1632339	2	AA
SNP	482	1930	NC_007793	1632345	G
SNP	483	1931	NC_007793	1632353	C
SNP	484	1932	NC_007793	1633809	A
SNP	485	1933	NC_007793	1634392	C
SNP	486	1934	NC_007793	1634430	C
SNP	487	1935	NC_007793	1634467	A
SNP	488	1936	NC_007793	1635367	G
SNP	489	1937	NC_007793	1635370	C
SNP	490	1938	NC_007793	1635409	C
SNP	491	1939	NC_007793	1635412	A
SNP	492	1940	NC_007793	1638466	A
SNP	493	1941	NC_007793	1644224	T
SNP	494	1942	NC_007793	1644501	C
SNP	495	1945	NC_007793	1661769	C
SNP	496	1946	NC_007793	1663728	C
SNP	497	1949	NC_007793	1664751	T
DEL	498	1950	NC_007793	1664756	1
SNP	499	1952	NC_007793	1666644	A
SNP	500	1954	NC_007793	1672339	G
SNP	501	1972	NC_007793	1685900	G
INS	502	1975	NC_007793	1693048	T	repeat_length=1	repeat_new_copies=8	repeat_ref_copies=7	repeat_seq=T
SNP	503	1976	NC_007793	1693739	C
SNP	504	1980	NC_007793	1699824	C
SNP	505	1981	NC_007793	1700259	A
SNP	506	1982	NC_007793	1706203	T
SNP	507	1992	NC_007793	1725858	A
SNP	508	1995	NC_007793	1745180	C
SNP	509	1999	NC_007793	1765020	C
SNP	510	2000	NC_007793	1771057	T
SNP	511	2001	NC_007793	1776121	C
SNP	512	2002	NC_007793	1783288	A
SNP	513	2014	NC_007793	1838956	G
SNP	514	2015	NC_007793	1846346	T
SNP	515	2026	NC_007793	1862563	C
SNP	516	2027	NC_007793	1863084	G
SNP	517	2028	NC_007793	1868492	T
SNP	518	2031	NC_007793	1871459	C
SNP	519	2032	NC_007793	1877205	G
SNP	520	2034	NC_007793	1887533	G
DEL	521	2035	NC_007793	1887849	1	repeat_length=1	repeat_new_copies=6	repeat_ref_copies=7	repeat_seq=T
SNP	522	2036	NC_007793	1897441	G
SNP	523	2037	NC_007793	1908169	C
SNP	524	2038	NC_007793	1909357	G
SNP	525	2046	NC_007793	1913997	T
SNP	526	2047	NC_007793	1914404	A
SNP	527	2049	NC_007793	1924728	A
SNP	528	2050	NC_007793	1924930	C
SNP	529	2051	NC_007793	1929062	A
SNP	530	2057	NC_007793	1929111	C
INS	531	2058	NC_007793	1929113	T
SUB	532	2059,2060,2061	NC_007793	1929115	3	CTT
SNP	533	2062	NC_007793	1929120	C
SUB	534	2063,2064	NC_007793	1929122	2	AA
SNP	535	2065	NC_007793	1929125	C
SUB	536	2066,2067	NC_007793	1929167	2	TG
SNP	537	2068	NC_007793	1929175	A
SNP	538	2069	NC_007793	1929178	A
SNP	539	2070	NC_007793	1929180	A
SNP	540	2072	NC_007793	1934278	T
SNP	541	2073	NC_007793	1945182	G
SNP	542	2074	NC_007793	1957984	T
SNP	543	2075	NC_007793	1958045	T
INS	544	2076	NC_007793	1959228	A	repeat_length=1	repeat_new_copies=8	repeat_ref_copies=7	repeat_seq=A
SNP	545	2077	NC_007793	1959504	A
SNP	546	2086	NC_007793	1969545	A
SNP	547	2087	NC_007793	1977282	A
SNP	548	2088	NC_007793	1980852	A
SNP	549	2089	NC_007793	1992545	T
SNP	550	2095	NC_007793	2000215	G
SNP	551	2096	NC_007793	2000230	G
SNP	552	2108	NC_007793	2000274	C
SNP	553	2109	NC_007793	2000294	G
SUB	554	2110,2111,2112,2113	NC_007793	2000301	4	ACGA
SNP	555	2114	NC_007793	2000306	G
SNP	556	2115	NC_007793	2000310	T
INS	557	2116	NC_007793	2000985	C	repeat_length=1	repeat_new_copies=6	repeat_ref_copies=5	repeat_seq=C
SNP	558	2129	NC_007793	2015166	T
SNP	559	2132	NC_007793	2019080	A
SNP	560	2133	NC_007793	2034247	T
SNP	561	2134	NC_007793	2036248	A
SNP	562	2136	NC_007793	2051965	C
SNP	563	2138	NC_007793	2057596	C
SNP	564	2139	NC_007793	2058531	A
SNP	565	2140	NC_007793	2063322	G
SNP	566	2145	NC_007793	2085036	A
SNP	567	2146	NC_007793	2085129	T
SNP	568	2147	NC_007793	2085398	G
SNP	569	2148	NC_007793	2085500	T
SNP	570	2149	NC_007793	2085565	C
SNP	571	2150	NC_007793	2085622	C
SNP	572	2151	NC_007793	2085894	A
SNP	573	2152	NC_007793	2086256	A
DEL	574	2153,2154	NC_007793	2086580	2	repeat_length=2	repeat_new_copies=3	repeat_ref_copies=4	repeat_seq=TA
SNP	575	2155	NC_007793	2087514	A
SNP	576	2156	NC_007793	2087525	T
SNP	577	2157	NC_007793	2087587	C
SNP	578	2158	NC_007793	2087964	C
SNP	579	2159	NC_007793	2088031	G
INS	580	2160	NC_007793	2088072	A	repeat_length=1	repeat_new_copies=7	repeat_ref_copies=6	repeat_seq=A
SNP	581	2161	NC_007793	2088140	G
SNP	582	2162	NC_007793	2088192	T
SNP	583	2163	NC_007793	2088904	T
SNP	584	2164	NC_007793	2092528	T
SNP	585	2165	NC_007793	2092534	G
SNP	586	2166	NC_007793	2092537	A
SNP	587	2167	NC_007793	2092540	G
SNP	588	2168	NC_007793	2092546	C
SNP	589	2169	NC_007793	2092549	T
SNP	590	2170	NC_007793	2092552	C
SNP	591	2171	NC_007793	2092555	A
SNP	592	2172	NC_007793	2092558	A
SNP	593	2173	NC_007793	2092564	G
SNP	594	2174	NC_007793	2092567	T
SNP	595	2175	NC_007793	2092573	A
SNP	596	2176	NC_007793	2092579	C
SNP	597	2177	NC_007793	2092583	C
SNP	598	2178	NC_007793	2092591	A
SNP	599	2179	NC_007793	2092837	C
SNP	600	2180	NC_007793	2092891	A
SNP	601	2181	NC_007793	2092897	A
SNP	602	2182	NC_007793	2093013	A
SNP	603	2183	NC_007793	2093018	T
SNP	604	2184	NC_007793	2093211	C
SNP	605	2185	NC_007793	2093730	C
SNP	606	2186	NC_007793	2093733	G
SNP	607	2187	NC_007793	2094008	T
SNP	608	2188	NC_007793	2094606	A
SNP	609	2189	NC_007793	2094628	G
SNP	610	2190	NC_007793	2098106	G
SNP	611	2191	NC_007793	2098112	C
SNP	612	2192	NC_007793	2098284	A
SNP	613	2193	NC_007793	2098359	T
SNP	614	2194	NC_007793	2098395	C
SNP	615	2195	NC_007793	2098407	A
SNP	616	2196	NC_007793	2098416	T
SNP	617	2197	NC_007793	2098428	G
SNP	618	2198	NC_007793	2098434	C
SNP	619	2199	NC_007793	2098446	T
SNP	620	2200	NC_007793	2098455	T
SNP	621	2201	NC_007793	2098458	G
SNP	622	2202	NC_007793	2098466	T
SNP	623	2203	NC_007793	2099190	A
SNP	624	2204	NC_007793	2099196	A
SNP	625	2205	NC_007793	2099202	T
SUB	626	2206,2207	NC_007793	2099213	2	CA
SNP	627	2208	NC_007793	2099223	T
SNP	628	2209	NC_007793	2099226	T
SNP	629	2210	NC_007793	2110894	T
SNP	630	2212	NC_007793	2111103	T
SNP	631	2213	NC_007793	2111210	T
SNP	632	2214	NC_007793	2111221	C
SNP	633	2215	NC_007793	2111231	G
SNP	634	2216	NC_007793	2111559	T
SNP	635	2217	NC_007793	2111571	T
SNP	636	2220	NC_007793	2113226	T
SNP	637	2221	NC_007793	2113230	G
SNP	638	2222	NC_007793	2113233	T
SNP	639	2223	NC_007793	2113246	C
SNP	640	2224	NC_007793	2113266	A
SNP	641	2225	NC_007793	2113269	T
SNP	642	2226	NC_007793	2113320	G
SNP	643	2227	NC_007793	2113329	A
SNP	644	2228	NC_007793	2113334	G
SNP	645	2229	NC_007793	2113341	C
SNP	646	2230	NC_007793	2113415	A
SNP	647	2231	NC_007793	2113512	T
SNP	648	2232	NC_007793	2113514	A
SNP	649	2234	NC_007793	2113526	G
SNP	650	2235	NC_007793	2119897	A
SNP	651	2236	NC_007793	2119904	C
SNP	652	2240	NC_007793	2119926	C
SNP	653	2241	NC_007793	2119944	T
SUB	654	2242,2243	NC_007793	2119946	2	GA
SNP	655	2244	NC_007793	2119951	A
SNP	656	2245	NC_007793	2119954	T
SNP	657	2246	NC_007793	2119957	T
SNP	658	2247	NC_007793	2119960	G
SNP	659	2248	NC_007793	2119966	T
SNP	660	2249	NC_007793	2120665	C
SUB	661	2250,2251	NC_007793	2120681	2	AA
SNP	662	2252	NC_007793	2120686	T
SNP	663	2253	NC_007793	2120777	T
SNP	664	2254	NC_007793	2120785	A
SNP	665	2255	NC_007793	2121001	A
SNP	666	2256	NC_007793	2121729	T
SNP	667	2257	NC_007793	2121898	A
SNP	668	2258	NC_007793	2125383	A
SNP	669	2259	NC_007793	2125405	G
SNP	670	2260	NC_007793	2125476	A
SNP	671	2261	NC_007793	2125484	A
SNP	672	2262	NC_007793	2125487	G
SNP	673	2263	NC_007793	2125492	T
SNP	674	2264	NC_007793	2125650	C
SNP	675	2265	NC_007793	2126660	C
SNP	676	2266	NC_007793	2126944	C
SNP	677	2267	NC_007793	2127028	A
SNP	678	2268	NC_007793	2127043	C
SNP	679	2269	NC_007793	2127173	T
SNP	680	2270	NC_007793	2127228	C
SNP	681	2271	NC_007793	2127409	G
SNP	682	2272	NC_007793	2127455	C
SNP	683	2273	NC_007793	2127837	A
SNP	684	2274	NC_007793	2131773	G
SNP	685	2276	NC_007793	2133286	C
SNP	686	2277	NC_007793	2135915	C
SNP	687	2278	NC_007793	2138166	A
SNP	688	2279	NC_007793	2142339	A
SNP	689	2280	NC_007793	2143497	G
INS	690	2283	NC_007793	2144826	A	repeat_length=1	repeat_new_copies=8	repeat_ref_copies=7	repeat_seq=A
SNP	691	2284	NC_007793	2146812	A
SNP	692	2285	NC_007793	2148597	A
SUB	693	2286,2287	NC_007793	2152543	2	GT
SNP	694	2288	NC_007793	2156615	C
SNP	695	2289	NC_007793	2158122	G
DEL	696	2301	NC_007793	2187812	1	repeat_length=1	repeat_new_copies=7	repeat_ref_copies=8	repeat_seq=A
SNP	697	2302	NC_007793	2188603	A
SNP	698	2303	NC_007793	2196542	T
SNP	699	2308	NC_007793	2230311	T
SNP	700	2309	NC_007793	2230768	T
SNP	701	2311	NC_007793	2234368	T
SNP	702	2312	NC_007793	2239982	C
SNP	703	2313	NC_007793	2240223	C
SNP	704	2317	NC_007793	2256605	A
SNP	705	2318	NC_007793	2262064	T
SNP	706	2319	NC_007793	2264201	A
SNP	707	2347	NC_007793	2275549	G
SNP	708	2348	NC_007793	2276564	G
SNP	709	2349	NC_007793	2279071	T
SNP	710	2353	NC_007793	2300166	C
SNP	711	2354	NC_007793	2300219	A
SNP	712	2355	NC_007793	2309270	T
SNP	713	2359	NC_007793	2313223	C
SNP	714	2365	NC_007793	2370973	C
SNP	715	2366	NC_007793	2381180	C
SNP	716	2367	NC_007793	2381781	A
SNP	717	2368	NC_007793	2384995	T
SNP	718	2369	NC_007793	2388589	T
SNP	719	2370	NC_007793	2388654	T
SNP	720	2371	NC_007793	2396927	T
SNP	721	2375	NC_007793	2414448	C
SNP	722	2376	NC_007793	2414460	C
SNP	723	2377	NC_007793	2414505	G
SNP	724	2381	NC_007793	2438783	A
SNP	725	2382	NC_007793	2443999	A
SNP	726	2383	NC_007793	2444611	C
SNP	727	2384	NC_007793	2445965	A
SNP	728	2385	NC_007793	2469973	C
SNP	729	2386	NC_007793	2472542	T
SNP	730	2387	NC_007793	2486803	G
SNP	731	2389	NC_007793	2490079	C
SNP	732	2391	NC_007793	2499398	T
SNP	733	2392	NC_007793	2500631	G
SNP	734	2393	NC_007793	2501150	G
SNP	735	2395	NC_007793	2503835	C
SNP	736	2396	NC_007793	2507313	A
SNP	737	2397	NC_007793	2507880	G
SNP	738	2398	NC_007793	2525762	T
SNP	739	2401	NC_007793	2530526	T
INS	740	2402,2403,2404	NC_007793	2531617	CAT	repeat_length=3	repeat_new_copies=3	repeat_ref_copies=2	repeat_seq=CAT
SNP	741	2405	NC_007793	2532141	T
SNP	742	2407	NC_007793	2546294	G
SNP	743	2408	NC_007793	2576289	T
SNP	744	2409	NC_007793	2576724	G
SNP	745	2411	NC_007793	2586131	T
SNP	746	2414	NC_007793	2590666	G
SNP	747	2415	NC_007793	2592235	T
SNP	748	2422	NC_007793	2601699	C
SNP	749	2428	NC_007793	2608681	C
SNP	750	2429	NC_007793	2610839	C
INS	751	2430	NC_007793	2613256	T	repeat_length=1	repeat_new_copies=8	repeat_ref_copies=7	repeat_seq=T
SNP	752	2431	NC_007793	2614129	A
SNP	753	2432	NC_007793	2616847	C
SNP	754	2434	NC_007793	2623504	T
SNP	755	2435	NC_007793	2623510	G
SNP	756	2436	NC_007793	2623516	A
SNP	757	2437	NC_007793	2623519	G
SNP	758	2438	NC_007793	2623539	C
SNP	759	2439	NC_007793	2623543	T
SUB	760	2440,2441,2442,2443	NC_007793	2623546	4	ACCG
SUB	761	2444,2445	NC_007793	2623552	2	AA
SNP	762	2446	NC_007793	2623555	T
SNP	763	2447	NC_007793	2623570	G
SUB	764	2448,2449,2450	NC_007793	2623573	3	CTC
SNP	765	2451	NC_007793	2623591	T
SNP	766	2452	NC_007793	2623596	C
SUB	767	2453,2454	NC_007793	2623599	2	CT
SNP	768	2455	NC_007793	2623603	T
SNP	769	2466	NC_007793	2624263	G
SNP	770	2469	NC_007793	2624923	A
INS	771	2470	NC_007793	2624971	T	repeat_length=1	repeat_new_copies=8	repeat_ref_copies=7	repeat_seq=T
SNP	772	2471	NC_007793	2630054	A
SNP	773	2473	NC_007793	2641715	A
SNP	774	2474	NC_007793	2652084	T
SNP	775	2475	NC_007793	2667711	T
SNP	776	2485	NC_007793	2679460	A
SNP	777	2487	NC_007793	2685939	G
SNP	778	2488	NC_007793	2686641	A
SNP	779	2492	NC_007793	2690352	G
SNP	780	2494	NC_007793	2698243	C
SNP	781	2495	NC_007793	2708564	G
SNP	782	2496	NC_007793	2709872	C
SNP	783	2497	NC_007793	2710106	T
INS	784	2498	NC_007793	2711049	A	repeat_length=1	repeat_new_copies=7	repeat_ref_copies=6	repeat_seq=A
SNP	785	2499	NC_007793	2711073	C
DEL	786	2500	NC_007793	2711162	1	repeat_length=1	repeat_new_copies=7	repeat_ref_copies=8	repeat_seq=A
SNP	787	2501	NC_007793	2711212	A
SNP	788	2502	NC_007793	2712483	T
SNP	789	2503	NC_007793	2717834	T
SNP	790	2504	NC_007793	2719734	A
SNP	791	2507	NC_007793	2721335	C
SNP	792	2508	NC_007793	2721367	G
SNP	793	2509	NC_007793	2722195	T
SNP	794	2510	NC_007793	2733322	T
SNP	795	2513	NC_007793	2735060	A
SNP	796	2514	NC_007793	2737328	T
SNP	797	2515	NC_007793	2740597	A
SNP	798	2516	NC_007793	2742108	T
SNP	799	2520	NC_007793	2753451	G
SNP	800	2523	NC_007793	2759517	A
SNP	801	2524	NC_007793	2759623	C
SNP	802	2547	NC_007793	2775724	G
SNP	803	2548	NC_007793	2791162	A
SNP	804	2549	NC_007793	2796433	A
SNP	805	2553	NC_007793	2798664	A
SNP	806	2554	NC_007793	2811673	A
SNP	807	2555	NC_007793	2819073	C
SNP	808	2560	NC_007793	2839280	A
SNP	809	2561	NC_007793	2841262	T
SNP	810	2566	NC_007793	2872409	A
RA	811	.	NC_007793	1425	0	T	C	consensus_score=235.2	frequency=1	major_base=C	major_cov=82/8	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=82/8	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=82/8
RA	812	.	NC_007793	5010	0	C	G	bias_e_value=2742210	bias_p_value=0.939928	consensus_score=867.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.674045	major_base=G	major_cov=314/12	major_frequency=9.969e-01	minor_base=A	minor_cov=1/0	new_cov=314/12	polymorphism_frequency=9.969e-01	polymorphism_score=-5.9	prediction=consensus	ref_cov=0/0	total_cov=316/12
RA	813	.	NC_007793	7282	0	T	C	consensus_score=792.6	frequency=1	major_base=C	major_cov=291/4	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=291/4	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=291/4
RA	814	.	NC_007793	24199	0	A	T	bias_e_value=2917470	bias_p_value=1	consensus_score=13.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=7/1	major_frequency=8.889e-01	minor_base=A	minor_cov=1/0	new_cov=7/1	polymorphism_frequency=8.889e-01	polymorphism_score=-3.6	prediction=consensus	ref_cov=1/0	total_cov=8/1
RA	815	.	NC_007793	26681	0	G	A	bias_e_value=823101	bias_p_value=0.282128	consensus_score=11.1	fisher_strand_p_value=0.264516	frequency=3.871e-01	ks_quality_p_value=0.302544	major_base=G	major_cov=16/3	major_frequency=6.129e-01	minor_base=A	minor_cov=12/0	new_cov=12/0	polymorphism_frequency=3.871e-01	polymorphism_score=20.0	prediction=polymorphism	ref_cov=16/3	total_cov=28/3
RA	816	.	NC_007793	34179	0	T	A	bias_e_value=370991	bias_p_value=0.127162	consensus_score=91.4	fisher_strand_p_value=0.0277778	frequency=1	ks_quality_p_value=0.998414	major_base=A	major_cov=35/0	major_frequency=9.722e-01	minor_base=G	minor_cov=0/1	new_cov=35/0	polymorphism_frequency=9.722e-01	polymorphism_score=-4.9	prediction=consensus	ref_cov=0/0	total_cov=35/1
RA	817	.	NC_007793	34324	0	T	C	consensus_score=88.9	frequency=1	major_base=C	major_cov=35/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=35/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=35/1
RA	818	.	NC_007793	36093	0	A	C	bias_e_value=2917140	bias_p_value=0.999886	consensus_score=64.6	fisher_strand_p_value=1	frequency=3.016e-01	ks_quality_p_value=0.984925	major_base=A	major_cov=6/38	major_frequency=6.984e-01	minor_base=C	minor_cov=2/17	new_cov=2/17	polymorphism_frequency=3.016e-01	polymorphism_score=35.1	prediction=polymorphism	ref_cov=6/38	total_cov=8/55
RA	819	.	NC_007793	36117	0	T	G	bias_e_value=294729	bias_p_value=0.101022	consensus_score=37.6	fisher_strand_p_value=0.022234	frequency=6.094e-01	ks_quality_p_value=0.931647	major_base=G	major_cov=2/37	major_frequency=6.094e-01	minor_base=T	minor_cov=7/18	new_cov=2/37	polymorphism_frequency=6.094e-01	polymorphism_score=60.6	prediction=polymorphism	ref_cov=7/18	total_cov=9/55
RA	820	.	NC_007793	36132	0	T	G	bias_e_value=147625	bias_p_value=0.0506005	consensus_score=33.2	fisher_strand_p_value=0.0105225	frequency=6.140e-01	ks_quality_p_value=0.839318	major_base=G	major_cov=1/34	major_frequency=6.140e-01	minor_base=T	minor_cov=6/16	new_cov=1/34	polymorphism_frequency=6.140e-01	polymorphism_score=53.1	prediction=polymorphism	ref_cov=6/16	total_cov=7/50
RA	821	.	NC_007793	36152	0	G	A	bias_e_value=1334830	bias_p_value=0.457531	consensus_score=24.0	fisher_strand_p_value=0.166667	frequency=1	ks_quality_p_value=0.974195	major_base=A	major_cov=2/15	major_frequency=9.444e-01	minor_base=G	minor_cov=1/0	new_cov=2/15	polymorphism_frequency=9.444e-01	polymorphism_score=-4.4	prediction=consensus	ref_cov=1/0	total_cov=3/15
RA	822	.	NC_007793	39462	0	A	G	bias_e_value=2227790	bias_p_value=0.763602	consensus_score=64.6	fisher_strand_p_value=0.559198	frequency=2.195e-01	ks_quality_p_value=0.709647	major_base=A	major_cov=4/28	major_frequency=7.805e-01	minor_base=G	minor_cov=0/9	new_cov=0/9	polymorphism_frequency=2.195e-01	polymorphism_score=10.4	prediction=polymorphism	ref_cov=4/28	total_cov=4/37
RA	823	.	NC_007793	39464	0	A	T	bias_e_value=1770370	bias_p_value=0.606816	consensus_score=67.0	fisher_strand_p_value=0.556866	frequency=2.381e-01	ks_quality_p_value=0.462352	major_base=A	major_cov=4/28	major_frequency=7.619e-01	minor_base=T	minor_cov=0/10	new_cov=0/10	polymorphism_frequency=2.381e-01	polymorphism_score=15.2	prediction=polymorphism	ref_cov=4/28	total_cov=4/38
RA	824	.	NC_007793	42235	0	T	C	bias_e_value=2825870	bias_p_value=0.968602	consensus_score=83.4	fisher_strand_p_value=1	frequency=2.414e-01	ks_quality_p_value=0.760108	major_base=T	major_cov=41/3	major_frequency=7.586e-01	minor_base=C	minor_cov=13/1	new_cov=13/1	polymorphism_frequency=2.414e-01	polymorphism_score=19.4	prediction=polymorphism	ref_cov=41/3	total_cov=54/4
RA	825	.	NC_007793	42236	0	T	A	bias_e_value=2917290	bias_p_value=0.99994	consensus_score=96.7	fisher_strand_p_value=1	frequency=2.414e-01	ks_quality_p_value=0.989088	major_base=T	major_cov=41/3	major_frequency=7.586e-01	minor_base=A	minor_cov=13/1	new_cov=13/1	polymorphism_frequency=2.414e-01	polymorphism_score=24.6	prediction=polymorphism	ref_cov=41/3	total_cov=54/4
RA	826	.	NC_007793	42241	0	C	A	bias_e_value=232.155	bias_p_value=7.95739e-05	consensus_score=85.7	fisher_strand_p_value=0.156018	frequency=6.176e-01	ks_quality_p_value=3.92207e-05	major_base=A	major_cov=83/1	major_frequency=6.176e-01	minor_base=C	minor_cov=49/3	new_cov=83/1	polymorphism_frequency=6.176e-01	polymorphism_score=133.5	prediction=polymorphism	ref_cov=49/3	total_cov=132/4
RA	827	.	NC_007793	42250	0	G	A	bias_e_value=83697	bias_p_value=0.0286882	consensus_score=119.5	fisher_strand_p_value=0.271286	frequency=6.565e-01	ks_quality_p_value=0.0165002	major_base=A	major_cov=85/1	major_frequency=6.565e-01	minor_base=G	minor_cov=43/2	new_cov=85/1	polymorphism_frequency=6.565e-01	polymorphism_score=87.2	prediction=polymorphism	ref_cov=43/2	total_cov=128/3
RA	828	.	NC_007793	42251	0	T	C	bias_e_value=21136.9	bias_p_value=0.00724493	consensus_score=99.1	fisher_strand_p_value=0.257505	frequency=6.667e-01	ks_quality_p_value=0.00351343	major_base=C	major_cov=85/1	major_frequency=6.667e-01	minor_base=T	minor_cov=41/2	new_cov=85/1	polymorphism_frequency=6.667e-01	polymorphism_score=86.0	prediction=polymorphism	ref_cov=41/2	total_cov=126/3
RA	829	.	NC_007793	42253	0	A	T	bias_e_value=2348080	bias_p_value=0.804834	consensus_score=233.6	fisher_strand_p_value=0.511829	frequency=2.109e-01	ks_quality_p_value=0.868288	major_base=A	major_cov=99/2	major_frequency=7.891e-01	minor_base=T	minor_cov=26/1	new_cov=26/1	polymorphism_frequency=2.109e-01	polymorphism_score=57.3	prediction=polymorphism	ref_cov=99/2	total_cov=126/3
RA	830	.	NC_007793	42254	0	A	C	bias_e_value=1762620	bias_p_value=0.604161	consensus_score=166.1	fisher_strand_p_value=0.257505	frequency=6.667e-01	ks_quality_p_value=0.992278	major_base=C	major_cov=85/1	major_frequency=6.667e-01	minor_base=A	minor_cov=41/2	new_cov=85/1	polymorphism_frequency=6.667e-01	polymorphism_score=99.7	prediction=polymorphism	ref_cov=41/2	total_cov=126/3
RA	831	.	NC_007793	42256	0	A	T	bias_e_value=220831	bias_p_value=0.0756926	consensus_score=128.3	fisher_strand_p_value=0.112224	frequency=6.615e-01	ks_quality_p_value=0.128797	major_base=T	major_cov=85/1	major_frequency=6.615e-01	minor_base=A	minor_cov=41/3	new_cov=85/1	polymorphism_frequency=6.615e-01	polymorphism_score=96.8	prediction=polymorphism	ref_cov=41/3	total_cov=126/4
RA	832	.	NC_007793	42259	0	C	G	bias_e_value=584.344	bias_p_value=0.000200291	consensus_score=31.7	fisher_strand_p_value=0.0413967	frequency=5.413e-01	ks_quality_p_value=0.000403172	major_base=G	major_cov=59/0	major_frequency=5.413e-01	minor_base=C	minor_cov=46/4	new_cov=59/0	polymorphism_frequency=5.413e-01	polymorphism_score=140.0	prediction=polymorphism	ref_cov=46/4	total_cov=131/5
RA	833	.	NC_007793	42265	0	A	T	bias_e_value=1657120	bias_p_value=0.568	consensus_score=49.9	fisher_strand_p_value=0.323992	frequency=5.548e-01	ks_quality_p_value=0.709841	major_base=T	major_cov=85/1	major_frequency=5.548e-01	minor_base=A	minor_cov=66/3	new_cov=85/1	polymorphism_frequency=5.548e-01	polymorphism_score=176.6	prediction=polymorphism	ref_cov=66/3	total_cov=152/4
RA	834	.	NC_007793	42272	0	T	C	bias_e_value=3742.29	bias_p_value=0.00128272	consensus_score=119.9	fisher_strand_p_value=0.297762	frequency=3.758e-01	ks_quality_p_value=0.000432644	major_base=T	major_cov=94/4	major_frequency=6.242e-01	minor_base=C	minor_cov=59/0	new_cov=59/0	polymorphism_frequency=3.758e-01	polymorphism_score=107.5	prediction=polymorphism	ref_cov=94/4	total_cov=153/4
RA	835	.	NC_007793	42286	0	T	G	bias_e_value=1942290	bias_p_value=0.665744	consensus_score=89.9	fisher_strand_p_value=0.310468	frequency=5.805e-01	ks_quality_p_value=0.978527	major_base=G	major_cov=100/1	major_frequency=5.805e-01	minor_base=T	minor_cov=70/3	new_cov=100/1	polymorphism_frequency=5.805e-01	polymorphism_score=189.4	prediction=polymorphism	ref_cov=70/3	total_cov=171/4
RA	836	.	NC_007793	42289	0	G	A	bias_e_value=1338430	bias_p_value=0.458765	consensus_score=60.7	fisher_strand_p_value=0.165331	frequency=5.730e-01	ks_quality_p_value=0.986176	major_base=A	major_cov=101/1	major_frequency=5.730e-01	minor_base=G	minor_cov=72/4	new_cov=101/1	polymorphism_frequency=5.730e-01	polymorphism_score=160.3	prediction=polymorphism	ref_cov=72/4	total_cov=173/5
RA	837	.	NC_007793	42292	0	T	A	bias_e_value=1016370	bias_p_value=0.348374	consensus_score=59.9	fisher_strand_p_value=0.165331	frequency=5.730e-01	ks_quality_p_value=0.653254	major_base=A	major_cov=101/1	major_frequency=5.730e-01	minor_base=T	minor_cov=72/4	new_cov=101/1	polymorphism_frequency=5.730e-01	polymorphism_score=196.8	prediction=polymorphism	ref_cov=72/4	total_cov=173/5
RA	838	.	NC_007793	42299	0	A	G	bias_e_value=677289	bias_p_value=0.232149	consensus_score=246.9	fisher_strand_p_value=0.0820571	frequency=6.831e-01	ks_quality_p_value=0.745738	major_base=G	major_cov=164/2	major_frequency=6.831e-01	minor_base=A	minor_cov=73/4	new_cov=164/2	polymorphism_frequency=6.831e-01	polymorphism_score=143.9	prediction=polymorphism	ref_cov=73/4	total_cov=237/6
RA	839	.	NC_007793	42301	0	T	G	bias_e_value=1844960	bias_p_value=0.632384	consensus_score=452.5	fisher_strand_p_value=1	frequency=2.194e-01	ks_quality_p_value=0.276835	major_base=T	major_cov=180/5	major_frequency=7.806e-01	minor_base=G	minor_cov=51/1	new_cov=51/1	polymorphism_frequency=2.194e-01	polymorphism_score=98.2	prediction=polymorphism	ref_cov=180/5	total_cov=235/6
RA	840	.	NC_007793	42319	0	A	T	bias_e_value=2349150	bias_p_value=0.8052	consensus_score=445.5	fisher_strand_p_value=0.466827	frequency=6.901e-01	ks_quality_p_value=0.952959	major_base=T	major_cov=231/5	major_frequency=6.901e-01	minor_base=A	minor_cov=102/4	new_cov=231/5	polymorphism_frequency=6.901e-01	polymorphism_score=228.5	prediction=polymorphism	ref_cov=102/4	total_cov=337/9
RA	841	.	NC_007793	42322	0	C	T	bias_e_value=1938430	bias_p_value=0.664422	consensus_score=406.5	fisher_strand_p_value=0.302693	frequency=6.770e-01	ks_quality_p_value=1	major_base=T	major_cov=236/5	major_frequency=6.770e-01	minor_base=C	minor_cov=110/5	new_cov=236/5	polymorphism_frequency=6.770e-01	polymorphism_score=206.7	prediction=polymorphism	ref_cov=110/5	total_cov=346/10
RA	842	.	NC_007793	42325	0	T	C	bias_e_value=1981850	bias_p_value=0.679304	consensus_score=280.5	fisher_strand_p_value=0.315365	frequency=6.619e-01	ks_quality_p_value=1	major_base=C	major_cov=226/5	major_frequency=6.619e-01	minor_base=T	minor_cov=113/5	new_cov=226/5	polymorphism_frequency=6.619e-01	polymorphism_score=237.8	prediction=polymorphism	ref_cov=113/5	total_cov=339/10
RA	843	.	NC_007793	42328	0	T	A	bias_e_value=249.684	bias_p_value=8.55825e-05	consensus_score=173.5	fisher_strand_p_value=0.735774	frequency=6.171e-01	ks_quality_p_value=8.99918e-06	major_base=A	major_cov=161/5	major_frequency=6.171e-01	minor_base=T	minor_cov=99/4	new_cov=161/5	polymorphism_frequency=6.171e-01	polymorphism_score=265.8	prediction=polymorphism	ref_cov=99/4	total_cov=260/9
RA	844	.	NC_007793	42341	0	A	C	bias_e_value=2029210	bias_p_value=0.695539	consensus_score=217.1	fisher_strand_p_value=0.515233	frequency=6.148e-01	ks_quality_p_value=0.639927	major_base=C	major_cov=161/5	major_frequency=6.148e-01	minor_base=A	minor_cov=99/5	new_cov=161/5	polymorphism_frequency=6.148e-01	polymorphism_score=274.5	prediction=polymorphism	ref_cov=99/5	total_cov=260/10
RA	845	.	NC_007793	42343	0	A	C	bias_e_value=0.0042277	bias_p_value=1.4491e-09	consensus_score=232.3	fisher_strand_p_value=0.515233	frequency=6.148e-01	ks_quality_p_value=1.14548e-10	major_base=C	major_cov=161/5	major_frequency=6.148e-01	minor_base=A	minor_cov=99/5	new_cov=161/5	polymorphism_frequency=6.148e-01	polymorphism_score=261.3	prediction=polymorphism	ref_cov=99/5	total_cov=260/10
RA	846	.	NC_007793	42346	0	T	A	bias_e_value=0.0100746	bias_p_value=3.4532e-09	consensus_score=171.3	fisher_strand_p_value=0.515233	frequency=6.148e-01	ks_quality_p_value=2.83425e-10	major_base=A	major_cov=161/5	major_frequency=6.148e-01	minor_base=T	minor_cov=99/5	new_cov=161/5	polymorphism_frequency=6.148e-01	polymorphism_score=260.8	prediction=polymorphism	ref_cov=99/5	total_cov=260/10
RA	847	.	NC_007793	42347	0	C	G	bias_e_value=0.000628211	bias_p_value=2.15327e-10	consensus_score=200.5	fisher_strand_p_value=0.515233	frequency=6.148e-01	ks_quality_p_value=1.57484e-11	major_base=G	major_cov=161/5	major_frequency=6.148e-01	minor_base=C	minor_cov=99/5	new_cov=161/5	polymorphism_frequency=6.148e-01	polymorphism_score=294.2	prediction=polymorphism	ref_cov=99/5	total_cov=260/10
RA	848	.	NC_007793	42348	0	A	C	bias_e_value=1.07987e-07	bias_p_value=3.70138e-14	consensus_score=226.7	fisher_strand_p_value=0.515233	frequency=6.148e-01	ks_quality_p_value=2.02381e-15	major_base=C	major_cov=161/5	major_frequency=6.148e-01	minor_base=A	minor_cov=99/5	new_cov=161/5	polymorphism_frequency=6.148e-01	polymorphism_score=274.0	prediction=polymorphism	ref_cov=99/5	total_cov=260/10
RA	849	.	NC_007793	42349	0	A	T	bias_e_value=2495360	bias_p_value=0.855315	consensus_score=212.7	fisher_strand_p_value=0.515233	frequency=6.148e-01	ks_quality_p_value=0.99537	major_base=T	major_cov=161/5	major_frequency=6.148e-01	minor_base=A	minor_cov=99/5	new_cov=161/5	polymorphism_frequency=6.148e-01	polymorphism_score=251.1	prediction=polymorphism	ref_cov=99/5	total_cov=260/10
RA	850	.	NC_007793	42356	0	C	A	bias_e_value=2901640	bias_p_value=0.994573	consensus_score=61.4	fisher_strand_p_value=1	frequency=4.811e-01	ks_quality_p_value=0.897642	major_base=C	major_cov=133/4	major_frequency=5.189e-01	minor_base=A	minor_cov=123/4	new_cov=123/4	polymorphism_frequency=4.811e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=133/4	total_cov=257/8
RA	851	.	NC_007793	42358	0	C	A	bias_e_value=2912440	bias_p_value=0.998277	consensus_score=226.1	fisher_strand_p_value=1	frequency=6.409e-01	ks_quality_p_value=0.941876	major_base=A	major_cov=161/5	major_frequency=6.409e-01	minor_base=C	minor_cov=90/3	new_cov=161/5	polymorphism_frequency=6.409e-01	polymorphism_score=239.1	prediction=polymorphism	ref_cov=90/3	total_cov=251/8
RA	852	.	NC_007793	42359	0	C	T	bias_e_value=2900650	bias_p_value=0.994234	consensus_score=233.9	fisher_strand_p_value=1	frequency=6.409e-01	ks_quality_p_value=0.894549	major_base=T	major_cov=161/5	major_frequency=6.409e-01	minor_base=C	minor_cov=90/3	new_cov=161/5	polymorphism_frequency=6.409e-01	polymorphism_score=169.8	prediction=polymorphism	ref_cov=90/3	total_cov=251/8
RA	853	.	NC_007793	42361	0	A	G	bias_e_value=2915450	bias_p_value=0.999307	consensus_score=212.5	fisher_strand_p_value=1	frequency=6.653e-01	ks_quality_p_value=0.963009	major_base=G	major_cov=160/5	major_frequency=6.653e-01	minor_base=A	minor_cov=80/3	new_cov=160/5	polymorphism_frequency=6.653e-01	polymorphism_score=176.8	prediction=polymorphism	ref_cov=80/3	total_cov=241/8
RA	854	.	NC_007793	42362	0	T	C	bias_e_value=2833860	bias_p_value=0.97134	consensus_score=209.3	fisher_strand_p_value=1	frequency=6.803e-01	ks_quality_p_value=0.770342	major_base=C	major_cov=160/6	major_frequency=6.803e-01	minor_base=T	minor_cov=76/2	new_cov=160/6	polymorphism_frequency=6.803e-01	polymorphism_score=160.1	prediction=polymorphism	ref_cov=76/2	total_cov=236/8
RA	855	.	NC_007793	42364	0	A	T	bias_e_value=2706660	bias_p_value=0.927743	consensus_score=309.0	fisher_strand_p_value=0.70876	frequency=6.860e-01	ks_quality_p_value=0.909743	major_base=T	major_cov=161/5	major_frequency=6.860e-01	minor_base=A	minor_cov=73/3	new_cov=161/5	polymorphism_frequency=6.860e-01	polymorphism_score=172.0	prediction=polymorphism	ref_cov=73/3	total_cov=234/8
RA	856	.	NC_007793	42367	0	G	A	bias_e_value=2917450	bias_p_value=0.999995	consensus_score=16.5	fisher_strand_p_value=1	frequency=5.270e-01	ks_quality_p_value=0.996781	major_base=A	major_cov=123/4	major_frequency=5.270e-01	minor_base=G	minor_cov=110/4	new_cov=123/4	polymorphism_frequency=5.270e-01	polymorphism_score=255.6	prediction=polymorphism	ref_cov=110/4	total_cov=234/8
RA	857	.	NC_007793	42389	0	C	T	bias_e_value=2917470	bias_p_value=1	consensus_score=100.6	fisher_strand_p_value=1	frequency=5.833e-01	ks_quality_p_value=1	major_base=T	major_cov=94/4	major_frequency=5.833e-01	minor_base=C	minor_cov=68/2	new_cov=94/4	polymorphism_frequency=5.833e-01	polymorphism_score=132.9	prediction=polymorphism	ref_cov=68/2	total_cov=164/6
RA	858	.	NC_007793	42391	0	T	A	bias_e_value=2899580	bias_p_value=0.993867	consensus_score=63.6	fisher_strand_p_value=1	frequency=5.774e-01	ks_quality_p_value=0.891311	major_base=A	major_cov=93/4	major_frequency=5.774e-01	minor_base=T	minor_cov=69/2	new_cov=93/4	polymorphism_frequency=5.774e-01	polymorphism_score=185.8	prediction=polymorphism	ref_cov=69/2	total_cov=162/6
RA	859	.	NC_007793	42406	0	G	A	bias_e_value=2915420	bias_p_value=0.999299	consensus_score=96.9	fisher_strand_p_value=1	frequency=2.750e-01	ks_quality_p_value=0.962779	major_base=G	major_cov=56/2	major_frequency=7.250e-01	minor_base=A	minor_cov=22/0	new_cov=22/0	polymorphism_frequency=2.750e-01	polymorphism_score=36.5	prediction=polymorphism	ref_cov=56/2	total_cov=79/2
RA	860	.	NC_007793	42409	0	A	G	bias_e_value=2792550	bias_p_value=0.957181	consensus_score=91.4	fisher_strand_p_value=1	frequency=2.533e-01	ks_quality_p_value=0.722011	major_base=A	major_cov=54/2	major_frequency=7.467e-01	minor_base=G	minor_cov=19/0	new_cov=19/0	polymorphism_frequency=2.533e-01	polymorphism_score=32.2	prediction=polymorphism	ref_cov=54/2	total_cov=74/2
RA	861	.	NC_007793	44826	0	T	G	bias_e_value=17183.8	bias_p_value=0.00588997	consensus_score=4.0	fisher_strand_p_value=0.000714456	frequency=4.737e-01	ks_quality_p_value=1	major_base=T	major_cov=0/10	major_frequency=5.263e-01	minor_base=G	minor_cov=7/2	new_cov=7/2	polymorphism_frequency=4.737e-01	polymorphism_score=16.7	prediction=polymorphism	ref_cov=0/10	total_cov=7/12
RA	862	.	NC_007793	54508	0	G	A	bias_e_value=1057000	bias_p_value=0.3623	consensus_score=26.0	fisher_strand_p_value=1	frequency=3.966e-01	ks_quality_p_value=0.114342	major_base=G	major_cov=34/1	major_frequency=6.034e-01	minor_base=A	minor_cov=23/0	new_cov=23/0	polymorphism_frequency=3.966e-01	polymorphism_score=42.9	prediction=polymorphism	ref_cov=34/1	total_cov=57/1
RA	863	.	NC_007793	62467	0	T	G	consensus_score=15.5	frequency=1	major_base=G	major_cov=0/8	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/8	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/8
RA	864	.	NC_007793	62522	0	G	A	consensus_score=14.7	frequency=1	major_base=A	major_cov=1/6	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/6	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/6
RA	865	.	NC_007793	62533	0	G	A	consensus_score=10.6	frequency=1	major_base=A	major_cov=1/5	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/5	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/5
RA	866	.	NC_007793	62578	0	G	A	consensus_score=10.6	frequency=1	major_base=A	major_cov=3/3	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=3/3	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=3/3
RA	867	.	NC_007793	67912	0	A	.	consensus_score=85.4	frequency=1	major_base=.	major_cov=16/7	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=16/7	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=16/7
RA	868	.	NC_007793	67926	0	T	C	bias_e_value=2913760	bias_p_value=0.998729	consensus_score=25.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.950011	major_base=C	major_cov=7/5	major_frequency=9.231e-01	minor_base=A	minor_cov=1/0	new_cov=7/5	polymorphism_frequency=9.231e-01	polymorphism_score=-3.5	prediction=consensus	ref_cov=0/0	total_cov=8/5
RA	869	.	NC_007793	76361	0	A	G	consensus_score=254.3	frequency=1	major_base=G	major_cov=137/5	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=137/5	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=137/5
RA	870	.	NC_007793	76402	0	C	T	consensus_score=235.4	frequency=1	major_base=T	major_cov=133/4	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=133/4	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=133/4
RA	871	.	NC_007793	76412	0	C	G	bias_e_value=2917190	bias_p_value=0.999903	consensus_score=201.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.986092	major_base=G	major_cov=116/3	major_frequency=9.917e-01	minor_base=A	minor_cov=1/0	new_cov=116/3	polymorphism_frequency=9.917e-01	polymorphism_score=-5.6	prediction=consensus	ref_cov=0/0	total_cov=117/3
RA	872	.	NC_007793	76418	0	G	A	bias_e_value=2917240	bias_p_value=0.999922	consensus_score=169.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.9875	major_base=A	major_cov=104/2	major_frequency=9.815e-01	minor_base=G	minor_cov=2/0	new_cov=104/2	polymorphism_frequency=9.815e-01	polymorphism_score=-5.1	prediction=consensus	ref_cov=2/0	total_cov=106/2
RA	873	.	NC_007793	76436	0	A	G	consensus_score=61.2	frequency=1	major_base=G	major_cov=38/2	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=38/2	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=38/2
RA	874	.	NC_007793	89635	0	T	C	bias_e_value=2360320	bias_p_value=0.80903	consensus_score=81.1	fisher_strand_p_value=0.552851	frequency=2.812e-01	ks_quality_p_value=0.813286	major_base=T	major_cov=43/3	major_frequency=7.188e-01	minor_base=C	minor_cov=18/0	new_cov=18/0	polymorphism_frequency=2.812e-01	polymorphism_score=26.9	prediction=polymorphism	ref_cov=43/3	total_cov=62/3
RA	875	.	NC_007793	90302	0	A	.	consensus_score=110.4	frequency=1	major_base=.	major_cov=28/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=28/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/1
RA	876	.	NC_007793	90303	0	T	.	consensus_score=110.4	frequency=1	major_base=.	major_cov=28/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=28/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/1
RA	877	.	NC_007793	90304	0	A	.	consensus_score=110.4	frequency=1	major_base=.	major_cov=28/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=28/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/1
RA	878	.	NC_007793	90305	0	T	.	consensus_score=110.4	frequency=1	major_base=.	major_cov=28/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=28/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/1
RA	879	.	NC_007793	95813	0	T	C	consensus_score=13.8	frequency=1	major_base=C	major_cov=4/3	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=4/3	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=4/3
RA	880	.	NC_007793	97315	0	C	T	bias_e_value=582871	bias_p_value=0.199787	consensus_score=102.0	fisher_strand_p_value=0.05	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=1/38	major_frequency=9.750e-01	minor_base=A	minor_cov=1/0	new_cov=1/38	polymorphism_frequency=9.750e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/38
RA	881	.	NC_007793	99032	0	G	C	bias_e_value=2716910	bias_p_value=0.931256	consensus_score=43.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.65291	major_base=C	major_cov=16/3	major_frequency=9.500e-01	minor_base=T	minor_cov=1/0	new_cov=16/3	polymorphism_frequency=9.500e-01	polymorphism_score=-4.4	prediction=consensus	ref_cov=0/0	total_cov=17/3
RA	882	.	NC_007793	99367	0	C	T	consensus_score=14.4	frequency=1	major_base=T	major_cov=5/2	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=5/2	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=5/2
RA	883	.	NC_007793	105836	0	A	G	consensus_score=10.4	frequency=1	major_base=G	major_cov=3/3	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=3/3	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=3/3
RA	884	.	NC_007793	115248	0	T	G	consensus_score=44.4	frequency=1	major_base=G	major_cov=19/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=19/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=19/0
RA	885	.	NC_007793	125406	0	G	T	consensus_score=28.9	frequency=1	major_base=T	major_cov=11/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=11/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=11/1
RA	886	.	NC_007793	127078	0	T	C	bias_e_value=428983	bias_p_value=0.147039	consensus_score=12.5	fisher_strand_p_value=0.0548716	frequency=5.127e-01	ks_quality_p_value=0.609263	major_base=C	major_cov=121/0	major_frequency=5.127e-01	minor_base=T	minor_cov=111/4	new_cov=121/0	polymorphism_frequency=5.127e-01	polymorphism_score=270.0	prediction=polymorphism	ref_cov=111/4	total_cov=232/4
RA	887	.	NC_007793	128641	0	A	G	bias_e_value=4.18702e-119	bias_p_value=1.43515e-125	consensus_score=16556.0	fisher_strand_p_value=0.00672067	frequency=2.298e-01	ks_quality_p_value=7.25977e-126	major_base=A	major_cov=151/6772	major_frequency=7.702e-01	minor_base=G	minor_cov=26/2039	new_cov=26/2039	polymorphism_frequency=2.298e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=151/6772	total_cov=178/8888
RA	888	.	NC_007793	128665	0	G	A	bias_e_value=5.90885e-103	bias_p_value=2.02533e-109	consensus_score=7480.7	fisher_strand_p_value=0.0800417	frequency=3.661e-01	ks_quality_p_value=9.85245e-111	major_base=G	major_cov=90/4162	major_frequency=6.339e-01	minor_base=A	minor_cov=69/2387	new_cov=69/2387	polymorphism_frequency=3.661e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=90/4162	total_cov=160/6575
RA	889	.	NC_007793	128677	0	A	G	bias_e_value=772967	bias_p_value=0.264944	consensus_score=1661.1	fisher_strand_p_value=0.465267	frequency=7.709e-01	ks_quality_p_value=0.157624	major_base=G	major_cov=109/2371	major_frequency=7.709e-01	minor_base=A	minor_cov=27/710	new_cov=109/2371	polymorphism_frequency=7.709e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=27/710	total_cov=136/3085
RA	890	.	NC_007793	129906	0	T	.	consensus_score=13.9	frequency=1	major_base=.	major_cov=1/4	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/4	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/4
RA	891	.	NC_007793	135186	0	A	G	bias_e_value=2615480	bias_p_value=0.896491	consensus_score=316.2	fisher_strand_p_value=0.581009	frequency=2.103e-01	ks_quality_p_value=1	major_base=A	major_cov=150/4	major_frequency=7.897e-01	minor_base=G	minor_cov=41/0	new_cov=41/0	polymorphism_frequency=2.103e-01	polymorphism_score=63.2	prediction=polymorphism	ref_cov=150/4	total_cov=191/4
RA	892	.	NC_007793	141817	0	G	A	bias_e_value=2392670	bias_p_value=0.820119	consensus_score=782.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.463775	major_base=A	major_cov=267/10	major_frequency=9.964e-01	minor_base=G	minor_cov=1/0	new_cov=267/10	polymorphism_frequency=9.964e-01	polymorphism_score=-5.8	prediction=consensus	ref_cov=1/0	total_cov=268/10
RA	893	.	NC_007793	143699	0	G	A	bias_e_value=22.0538	bias_p_value=7.55923e-06	consensus_score=334.8	fisher_strand_p_value=1	frequency=2.360e-01	ks_quality_p_value=4.86565e-07	major_base=G	major_cov=190/1	major_frequency=7.640e-01	minor_base=A	minor_cov=59/0	new_cov=59/0	polymorphism_frequency=2.360e-01	polymorphism_score=97.4	prediction=polymorphism	ref_cov=190/1	total_cov=251/1
RA	894	.	NC_007793	144481	0	A	G	bias_e_value=199316	bias_p_value=0.0683182	consensus_score=368.4	fisher_strand_p_value=0.0393094	frequency=2.711e-01	ks_quality_p_value=0.324057	major_base=A	major_cov=196/11	major_frequency=7.289e-01	minor_base=G	minor_cov=77/0	new_cov=77/0	polymorphism_frequency=2.711e-01	polymorphism_score=139.6	prediction=polymorphism	ref_cov=196/11	total_cov=277/11
RA	895	.	NC_007793	150376	0	C	T	consensus_score=17.7	frequency=1	major_base=T	major_cov=8/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=8/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=8/0
RA	896	.	NC_007793	154432	0	T	G	bias_e_value=2469930	bias_p_value=0.846599	consensus_score=114.7	fisher_strand_p_value=0.500036	frequency=4.611e-01	ks_quality_p_value=1	major_base=T	major_cov=88/2	major_frequency=5.389e-01	minor_base=G	minor_cov=77/0	new_cov=77/0	polymorphism_frequency=4.611e-01	polymorphism_score=58.9	prediction=polymorphism	ref_cov=88/2	total_cov=173/2
RA	897	.	NC_007793	154439	0	A	T	bias_e_value=2465210	bias_p_value=0.844982	consensus_score=76.1	fisher_strand_p_value=0.519108	frequency=3.953e-01	ks_quality_p_value=0.958782	major_base=A	major_cov=102/2	major_frequency=6.047e-01	minor_base=T	minor_cov=68/0	new_cov=68/0	polymorphism_frequency=3.953e-01	polymorphism_score=102.7	prediction=polymorphism	ref_cov=102/2	total_cov=175/2
RA	898	.	NC_007793	154441	0	C	A	bias_e_value=2917470	bias_p_value=1	consensus_score=204.5	fisher_strand_p_value=1	frequency=2.222e-01	ks_quality_p_value=1	major_base=C	major_cov=124/2	major_frequency=7.778e-01	minor_base=A	minor_cov=36/0	new_cov=36/0	polymorphism_frequency=2.222e-01	polymorphism_score=30.7	prediction=polymorphism	ref_cov=124/2	total_cov=175/2
RA	899	.	NC_007793	154447	0	A	C	bias_e_value=2813700	bias_p_value=0.964432	consensus_score=204.8	fisher_strand_p_value=1	frequency=2.092e-01	ks_quality_p_value=0.745428	major_base=A	major_cov=119/2	major_frequency=7.908e-01	minor_base=C	minor_cov=32/0	new_cov=32/0	polymorphism_frequency=2.092e-01	polymorphism_score=23.5	prediction=polymorphism	ref_cov=119/2	total_cov=169/2
RA	900	.	NC_007793	154450	0	A	T	bias_e_value=2917210	bias_p_value=0.99991	consensus_score=166.4	fisher_strand_p_value=1	frequency=2.831e-01	ks_quality_p_value=0.986646	major_base=A	major_cov=117/2	major_frequency=7.169e-01	minor_base=T	minor_cov=47/0	new_cov=47/0	polymorphism_frequency=2.831e-01	polymorphism_score=55.3	prediction=polymorphism	ref_cov=117/2	total_cov=169/2
RA	901	.	NC_007793	154453	0	C	T	bias_e_value=2520820	bias_p_value=0.864045	consensus_score=98.6	fisher_strand_p_value=0.526177	frequency=3.795e-01	ks_quality_p_value=1	major_base=C	major_cov=101/2	major_frequency=6.205e-01	minor_base=T	minor_cov=63/0	new_cov=63/0	polymorphism_frequency=3.795e-01	polymorphism_score=67.9	prediction=polymorphism	ref_cov=101/2	total_cov=167/2
RA	902	.	NC_007793	154455	0	G	T	bias_e_value=2917470	bias_p_value=1	consensus_score=237.2	fisher_strand_p_value=1	frequency=2.250e-01	ks_quality_p_value=1	major_base=G	major_cov=122/2	major_frequency=7.750e-01	minor_base=T	minor_cov=36/0	new_cov=36/0	polymorphism_frequency=2.250e-01	polymorphism_score=35.0	prediction=polymorphism	ref_cov=122/2	total_cov=162/2
RA	903	.	NC_007793	154458	0	A	G	bias_e_value=2463720	bias_p_value=0.84447	consensus_score=42.9	fisher_strand_p_value=0.496979	frequency=4.904e-01	ks_quality_p_value=1	major_base=A	major_cov=78/2	major_frequency=5.096e-01	minor_base=G	minor_cov=77/0	new_cov=77/0	polymorphism_frequency=4.904e-01	polymorphism_score=88.0	prediction=polymorphism	ref_cov=78/2	total_cov=159/2
RA	904	.	NC_007793	154471	0	T	C	bias_e_value=2917470	bias_p_value=1	consensus_score=206.6	fisher_strand_p_value=1	frequency=2.208e-01	ks_quality_p_value=1	major_base=T	major_cov=118/2	major_frequency=7.792e-01	minor_base=C	minor_cov=34/0	new_cov=34/0	polymorphism_frequency=2.208e-01	polymorphism_score=15.6	prediction=polymorphism	ref_cov=118/2	total_cov=152/2
RA	905	.	NC_007793	154476	0	C	T	bias_e_value=2878280	bias_p_value=0.986567	consensus_score=138.0	fisher_strand_p_value=1	frequency=2.283e-01	ks_quality_p_value=0.840633	major_base=C	major_cov=96/2	major_frequency=7.717e-01	minor_base=T	minor_cov=29/0	new_cov=29/0	polymorphism_frequency=2.283e-01	polymorphism_score=21.5	prediction=polymorphism	ref_cov=96/2	total_cov=128/2
RA	906	.	NC_007793	178354	0	T	G	consensus_score=13.2	frequency=1	major_base=G	major_cov=4/3	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=4/3	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=4/3
RA	907	.	NC_007793	205448	0	A	C	consensus_score=77.4	frequency=1	major_base=C	major_cov=30/2	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=30/2	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=30/2
RA	908	.	NC_007793	214514	0	T	C	consensus_score=14.3	frequency=1	major_base=C	major_cov=0/8	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/8	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/8
RA	909	.	NC_007793	217786	0	C	T	bias_e_value=1721970	bias_p_value=0.590226	consensus_score=21.3	fisher_strand_p_value=0.525397	frequency=3.611e-01	ks_quality_p_value=0.467173	major_base=C	major_cov=2/21	major_frequency=6.389e-01	minor_base=T	minor_cov=0/13	new_cov=0/13	polymorphism_frequency=3.611e-01	polymorphism_score=21.2	prediction=polymorphism	ref_cov=2/21	total_cov=2/34
RA	910	.	NC_007793	218779	0	G	.	consensus_score=41.1	frequency=1	major_base=.	major_cov=1/11	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/11	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/11
RA	911	.	NC_007793	222147	0	C	T	bias_e_value=1196.83	bias_p_value=0.000410229	consensus_score=86.0	fisher_strand_p_value=0.159764	frequency=2.239e-01	ks_quality_p_value=0.000228931	major_base=C	major_cov=14/38	major_frequency=7.761e-01	minor_base=T	minor_cov=1/14	new_cov=1/14	polymorphism_frequency=2.239e-01	polymorphism_score=22.7	prediction=polymorphism	ref_cov=14/38	total_cov=15/52
RA	912	.	NC_007793	234362	0	G	A	consensus_score=103.7	frequency=1	major_base=A	major_cov=38/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=38/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=38/1
RA	913	.	NC_007793	240358	0	T	A	consensus_score=33.7	frequency=1	major_base=A	major_cov=14/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=14/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=14/1
RA	914	.	NC_007793	243550	0	G	A	consensus_score=20.5	frequency=1	major_base=A	major_cov=2/7	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/7	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/7
RA	915	.	NC_007793	243823	0	T	.	consensus_score=45.5	frequency=1	major_base=.	major_cov=2/11	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/11	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/11
RA	916	.	NC_007793	257764	0	A	G	bias_e_value=582148	bias_p_value=0.199539	consensus_score=16.0	fisher_strand_p_value=0.525692	frequency=3.478e-01	ks_quality_p_value=0.0949554	major_base=A	major_cov=2/13	major_frequency=6.522e-01	minor_base=G	minor_cov=0/8	new_cov=0/8	polymorphism_frequency=3.478e-01	polymorphism_score=10.4	prediction=polymorphism	ref_cov=2/13	total_cov=2/21
RA	917	.	NC_007793	260636	1	.	C	bias_e_value=2917290	bias_p_value=0.99994	consensus_score=153.4	fisher_strand_p_value=1	frequency=2.063e-01	ks_quality_p_value=0.989071	major_base=.	major_cov=50/0	major_frequency=7.937e-01	minor_base=C	minor_cov=13/0	new_cov=13/0	polymorphism_frequency=2.063e-01	polymorphism_score=51.3	prediction=polymorphism	ref_cov=50/0	total_cov=63/0
RA	918	.	NC_007793	260641	0	C	G	bias_e_value=2917470	bias_p_value=1	consensus_score=133.3	fisher_strand_p_value=1	frequency=2.059e-01	ks_quality_p_value=1	major_base=C	major_cov=54/0	major_frequency=7.941e-01	minor_base=G	minor_cov=14/0	new_cov=14/0	polymorphism_frequency=2.059e-01	polymorphism_score=28.6	prediction=polymorphism	ref_cov=54/0	total_cov=68/0
RA	919	.	NC_007793	264788	0	G	T	consensus_score=21.1	frequency=1	major_base=T	major_cov=8/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=8/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=8/1
RA	920	.	NC_007793	267106	0	G	A	consensus_score=172.6	frequency=1	major_base=A	major_cov=57/6	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=57/6	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=57/6
RA	921	.	NC_007793	267908	0	T	G	bias_e_value=20.0551	bias_p_value=6.87414e-06	consensus_score=669.7	fisher_strand_p_value=4.39654e-07	frequency=2.711e-01	ks_quality_p_value=0.999866	major_base=T	major_cov=235/7	major_frequency=7.289e-01	minor_base=G	minor_cov=71/19	new_cov=71/19	polymorphism_frequency=2.711e-01	polymorphism_score=209.0	prediction=polymorphism	ref_cov=235/7	total_cov=306/26
RA	922	.	NC_007793	267915	0	T	A	bias_e_value=0.00401839	bias_p_value=1.37736e-09	consensus_score=699.2	fisher_strand_p_value=5.59762e-11	frequency=2.527e-01	ks_quality_p_value=1	major_base=T	major_cov=268/4	major_frequency=7.473e-01	minor_base=A	minor_cov=70/22	new_cov=70/22	polymorphism_frequency=2.527e-01	polymorphism_score=204.0	prediction=polymorphism	ref_cov=268/4	total_cov=339/26
RA	923	.	NC_007793	267916	0	C	G	bias_e_value=0.0102934	bias_p_value=3.52819e-09	consensus_score=703.2	fisher_strand_p_value=1.67033e-10	frequency=2.486e-01	ks_quality_p_value=0.894094	major_base=C	major_cov=270/5	major_frequency=7.514e-01	minor_base=G	minor_cov=69/22	new_cov=69/22	polymorphism_frequency=2.486e-01	polymorphism_score=239.1	prediction=polymorphism	ref_cov=270/5	total_cov=339/27
RA	924	.	NC_007793	267917	0	A	C	bias_e_value=0.00560159	bias_p_value=1.92002e-09	consensus_score=729.3	fisher_strand_p_value=7.91442e-11	frequency=2.401e-01	ks_quality_p_value=1	major_base=A	major_cov=283/5	major_frequency=7.599e-01	minor_base=C	minor_cov=69/22	new_cov=69/22	polymorphism_frequency=2.401e-01	polymorphism_score=205.7	prediction=polymorphism	ref_cov=283/5	total_cov=352/27
RA	925	.	NC_007793	267923	0	A	G	bias_e_value=1.97846	bias_p_value=6.78143e-07	consensus_score=461.5	fisher_strand_p_value=3.80304e-08	frequency=3.515e-01	ks_quality_p_value=0.985182	major_base=A	major_cov=280/6	major_frequency=6.485e-01	minor_base=G	minor_cov=129/26	new_cov=129/26	polymorphism_frequency=3.515e-01	polymorphism_score=293.7	prediction=polymorphism	ref_cov=280/6	total_cov=410/32
RA	926	.	NC_007793	267932	0	T	C	bias_e_value=0.0160436	bias_p_value=5.49914e-09	consensus_score=433.0	fisher_strand_p_value=2.38553e-10	frequency=3.910e-01	ks_quality_p_value=0.995291	major_base=T	major_cov=279/6	major_frequency=6.090e-01	minor_base=C	minor_cov=148/35	new_cov=148/35	polymorphism_frequency=3.910e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=279/6	total_cov=427/41
RA	927	.	NC_007793	267935	0	C	T	bias_e_value=0.0117149	bias_p_value=4.01544e-09	consensus_score=376.8	fisher_strand_p_value=1.70945e-10	frequency=3.872e-01	ks_quality_p_value=1	major_base=C	major_cov=282/6	major_frequency=6.128e-01	minor_base=T	minor_cov=147/35	new_cov=147/35	polymorphism_frequency=3.872e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=282/6	total_cov=429/41
RA	928	.	NC_007793	267953	0	T	C	bias_e_value=5.64868	bias_p_value=1.93616e-06	consensus_score=238.4	fisher_strand_p_value=2.09687e-06	frequency=6.135e-01	ks_quality_p_value=0.0543559	major_base=C	major_cov=301/53	major_frequency=6.135e-01	minor_base=T	minor_cov=216/7	new_cov=301/53	polymorphism_frequency=6.135e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=216/7	total_cov=518/60
RA	929	.	NC_007793	267956	0	T	C	bias_e_value=0.0208243	bias_p_value=7.1378e-09	consensus_score=203.6	fisher_strand_p_value=1.51718e-06	frequency=5.921e-01	ks_quality_p_value=0.000205546	major_base=C	major_cov=291/53	major_frequency=5.921e-01	minor_base=T	minor_cov=229/8	new_cov=291/53	polymorphism_frequency=5.921e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=229/8	total_cov=522/61
RA	930	.	NC_007793	267984	0	C	T	bias_e_value=254.19	bias_p_value=8.71268e-05	consensus_score=643.9	fisher_strand_p_value=6.92986e-06	frequency=3.148e-01	ks_quality_p_value=0.974185	major_base=C	major_cov=403/65	major_frequency=6.852e-01	minor_base=T	minor_cov=208/7	new_cov=208/7	polymorphism_frequency=3.148e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=403/65	total_cov=611/72
RA	931	.	NC_007793	267986	0	A	C	bias_e_value=4.09337e-36	bias_p_value=1.40305e-42	consensus_score=919.3	fisher_strand_p_value=1.18201e-07	frequency=2.990e-01	ks_quality_p_value=1.16379e-37	major_base=A	major_cov=421/83	major_frequency=7.010e-01	minor_base=C	minor_cov=208/7	new_cov=208/7	polymorphism_frequency=2.990e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=421/83	total_cov=631/90
RA	932	.	NC_007793	267989	0	C	G	bias_e_value=0.167874	bias_p_value=5.75408e-08	consensus_score=1134.0	fisher_strand_p_value=3.26495e-09	frequency=2.682e-01	ks_quality_p_value=0.851353	major_base=C	major_cov=418/84	major_frequency=7.318e-01	minor_base=G	minor_cov=181/3	new_cov=181/3	polymorphism_frequency=2.682e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=418/84	total_cov=600/88
RA	933	.	NC_007793	267999	0	A	G	bias_e_value=25.1945	bias_p_value=8.63573e-06	consensus_score=1048.0	fisher_strand_p_value=8.17106e-07	frequency=2.507e-01	ks_quality_p_value=0.686565	major_base=A	major_cov=452/89	major_frequency=7.493e-01	minor_base=G	minor_cov=175/6	new_cov=175/6	polymorphism_frequency=2.507e-01	polymorphism_score=300.4	prediction=polymorphism	ref_cov=452/89	total_cov=628/95
RA	934	.	NC_007793	268004	0	A	G	bias_e_value=864.126	bias_p_value=0.00029619	consensus_score=1062.8	fisher_strand_p_value=3.24266e-05	frequency=2.302e-01	ks_quality_p_value=0.789252	major_base=A	major_cov=417/88	major_frequency=7.698e-01	minor_base=G	minor_cov=144/7	new_cov=144/7	polymorphism_frequency=2.302e-01	polymorphism_score=254.7	prediction=polymorphism	ref_cov=417/88	total_cov=562/95
RA	935	.	NC_007793	268007	0	C	T	bias_e_value=9.44831	bias_p_value=3.23853e-06	consensus_score=906.4	fisher_strand_p_value=4.04477e-07	frequency=2.550e-01	ks_quality_p_value=0.487023	major_base=C	major_cov=399/89	major_frequency=7.450e-01	minor_base=T	minor_cov=161/6	new_cov=161/6	polymorphism_frequency=2.550e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=399/89	total_cov=560/95
RA	936	.	NC_007793	268013	0	T	C	bias_e_value=0.0192446	bias_p_value=6.59634e-09	consensus_score=1029.7	fisher_strand_p_value=1.06984e-06	frequency=2.325e-01	ks_quality_p_value=0.000268414	major_base=T	major_cov=384/88	major_frequency=7.675e-01	minor_base=C	minor_cov=138/5	new_cov=138/5	polymorphism_frequency=2.325e-01	polymorphism_score=242.4	prediction=polymorphism	ref_cov=384/88	total_cov=523/93
RA	937	.	NC_007793	268016	0	C	T	bias_e_value=9.98441	bias_p_value=3.42229e-06	consensus_score=1038.4	fisher_strand_p_value=5.14942e-06	frequency=2.077e-01	ks_quality_p_value=0.0405703	major_base=C	major_cov=398/94	major_frequency=7.923e-01	minor_base=T	minor_cov=124/5	new_cov=124/5	polymorphism_frequency=2.077e-01	polymorphism_score=237.4	prediction=polymorphism	ref_cov=398/94	total_cov=523/99
RA	938	.	NC_007793	268030	0	G	C	bias_e_value=1.13752	bias_p_value=3.89901e-07	consensus_score=1362.4	fisher_strand_p_value=5.66064e-05	frequency=2.133e-01	ks_quality_p_value=0.000368632	major_base=G	major_cov=434/86	major_frequency=7.867e-01	minor_base=C	minor_cov=135/6	new_cov=135/6	polymorphism_frequency=2.133e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=434/86	total_cov=575/92
RA	939	.	NC_007793	268160	0	T	C	bias_e_value=2507220	bias_p_value=0.859383	consensus_score=496.0	fisher_strand_p_value=1	frequency=2.016e-01	ks_quality_p_value=0.518994	major_base=T	major_cov=191/15	major_frequency=7.984e-01	minor_base=C	minor_cov=48/4	new_cov=48/4	polymorphism_frequency=2.016e-01	polymorphism_score=76.1	prediction=polymorphism	ref_cov=191/15	total_cov=240/19
RA	940	.	NC_007793	268339	1	.	G	bias_e_value=2492510	bias_p_value=0.854341	consensus_score=149.1	fisher_strand_p_value=0.569844	frequency=2.727e-01	ks_quality_p_value=0.897426	major_base=.	major_cov=52/4	major_frequency=7.273e-01	minor_base=G	minor_cov=21/0	new_cov=21/0	polymorphism_frequency=2.727e-01	polymorphism_score=79.6	prediction=polymorphism	ref_cov=52/4	total_cov=73/4
RA	941	.	NC_007793	269528	0	A	G	consensus_score=60.0	frequency=1	major_base=G	major_cov=4/21	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=4/21	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=4/21
RA	942	.	NC_007793	270510	0	T	C	consensus_score=12.6	frequency=1	major_base=C	major_cov=2/5	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/5	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/5
RA	943	.	NC_007793	271976	0	G	C	consensus_score=10.7	frequency=1	major_base=C	major_cov=2/4	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/4	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/4
RA	944	.	NC_007793	275084	0	G	A	consensus_score=10.3	frequency=1	major_base=A	major_cov=3/3	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=3/3	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=3/3
RA	945	.	NC_007793	277058	0	C	T	consensus_score=13.6	frequency=1	major_base=T	major_cov=7/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=7/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=7/0
RA	946	.	NC_007793	291848	0	A	G	consensus_score=37.5	frequency=1	major_base=G	major_cov=14/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=14/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=14/1
RA	947	.	NC_007793	296259	1	.	G	bias_e_value=2907030	bias_p_value=0.99642	consensus_score=145.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.916588	major_base=G	major_cov=56/4	major_frequency=9.677e-01	minor_base=.	minor_cov=2/0	new_cov=56/4	polymorphism_frequency=9.677e-01	polymorphism_score=0.4	prediction=consensus	ref_cov=2/0	total_cov=59/4
RA	948	.	NC_007793	302727	1	.	C	bias_e_value=857758	bias_p_value=0.294008	consensus_score=487.8	fisher_strand_p_value=0.582567	frequency=2.056e-01	ks_quality_p_value=0.14554	major_base=.	major_cov=139/4	major_frequency=7.944e-01	minor_base=C	minor_cov=37/0	new_cov=37/0	polymorphism_frequency=2.056e-01	polymorphism_score=154.8	prediction=polymorphism	ref_cov=139/4	total_cov=176/4
RA	949	.	NC_007793	304266	0	G	A	bias_e_value=2917400	bias_p_value=0.999975	consensus_score=1529.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.992962	major_base=A	major_cov=535/3	major_frequency=9.981e-01	minor_base=G	minor_cov=1/0	new_cov=535/3	polymorphism_frequency=9.981e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=536/3
RA	950	.	NC_007793	308069	1	.	C	bias_e_value=2826820	bias_p_value=0.968928	consensus_score=33.9	fisher_strand_p_value=1	frequency=3.333e-01	ks_quality_p_value=0.7613	major_base=.	major_cov=21/1	major_frequency=6.667e-01	minor_base=C	minor_cov=11/0	new_cov=11/0	polymorphism_frequency=3.333e-01	polymorphism_score=46.1	prediction=polymorphism	ref_cov=21/1	total_cov=33/1
RA	951	.	NC_007793	308071	0	A	G	bias_e_value=2917030	bias_p_value=0.999848	consensus_score=31.1	fisher_strand_p_value=1	frequency=3.143e-01	ks_quality_p_value=0.98262	major_base=A	major_cov=23/1	major_frequency=6.857e-01	minor_base=G	minor_cov=11/0	new_cov=11/0	polymorphism_frequency=3.143e-01	polymorphism_score=15.4	prediction=polymorphism	ref_cov=23/1	total_cov=34/1
RA	952	.	NC_007793	311367	0	T	G	consensus_score=14.8	frequency=1	major_base=G	major_cov=7/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=7/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=7/1
RA	953	.	NC_007793	316573	0	T	G	consensus_score=18.0	frequency=1	major_base=G	major_cov=5/4	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=5/4	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=5/4
RA	954	.	NC_007793	320281	0	T	A	bias_e_value=491785	bias_p_value=0.168566	consensus_score=56.7	fisher_strand_p_value=0.0399412	frequency=3.261e-01	ks_quality_p_value=1	major_base=T	major_cov=8/23	major_frequency=6.739e-01	minor_base=A	minor_cov=0/15	new_cov=0/15	polymorphism_frequency=3.261e-01	polymorphism_score=15.7	prediction=polymorphism	ref_cov=8/23	total_cov=8/38
RA	955	.	NC_007793	320288	0	G	A	bias_e_value=215344	bias_p_value=0.073812	consensus_score=26.4	fisher_strand_p_value=0.0140118	frequency=4.130e-01	ks_quality_p_value=1	major_base=G	major_cov=8/19	major_frequency=5.870e-01	minor_base=A	minor_cov=0/19	new_cov=0/19	polymorphism_frequency=4.130e-01	polymorphism_score=21.0	prediction=polymorphism	ref_cov=8/19	total_cov=8/38
RA	956	.	NC_007793	320291	0	A	T	bias_e_value=491785	bias_p_value=0.168566	consensus_score=57.0	fisher_strand_p_value=0.0399412	frequency=3.261e-01	ks_quality_p_value=1	major_base=A	major_cov=8/23	major_frequency=6.739e-01	minor_base=T	minor_cov=0/15	new_cov=0/15	polymorphism_frequency=3.261e-01	polymorphism_score=11.2	prediction=polymorphism	ref_cov=8/23	total_cov=8/38
RA	957	.	NC_007793	320299	0	G	C	bias_e_value=464290	bias_p_value=0.159142	consensus_score=42.0	fisher_strand_p_value=0.0370481	frequency=3.636e-01	ks_quality_p_value=1	major_base=G	major_cov=7/21	major_frequency=6.364e-01	minor_base=C	minor_cov=0/16	new_cov=0/16	polymorphism_frequency=3.636e-01	polymorphism_score=22.9	prediction=polymorphism	ref_cov=7/21	total_cov=7/38
RA	958	.	NC_007793	320303	0	T	C	bias_e_value=797020	bias_p_value=0.273189	consensus_score=39.8	fisher_strand_p_value=0.0765188	frequency=3.171e-01	ks_quality_p_value=1	major_base=T	major_cov=7/21	major_frequency=6.829e-01	minor_base=C	minor_cov=0/13	new_cov=0/13	polymorphism_frequency=3.171e-01	polymorphism_score=12.3	prediction=polymorphism	ref_cov=7/21	total_cov=7/40
RA	959	.	NC_007793	320306	0	G	A	bias_e_value=809841	bias_p_value=0.277583	consensus_score=38.1	fisher_strand_p_value=0.0782361	frequency=3.404e-01	ks_quality_p_value=1	major_base=G	major_cov=7/24	major_frequency=6.596e-01	minor_base=A	minor_cov=0/16	new_cov=0/16	polymorphism_frequency=3.404e-01	polymorphism_score=14.2	prediction=polymorphism	ref_cov=7/24	total_cov=7/41
RA	960	.	NC_007793	320312	0	T	G	bias_e_value=443160	bias_p_value=0.151899	consensus_score=41.9	fisher_strand_p_value=0.0348702	frequency=3.929e-01	ks_quality_p_value=1	major_base=T	major_cov=7/27	major_frequency=6.071e-01	minor_base=G	minor_cov=0/22	new_cov=0/22	polymorphism_frequency=3.929e-01	polymorphism_score=20.9	prediction=polymorphism	ref_cov=7/27	total_cov=7/52
RA	961	.	NC_007793	320316	0	G	A	bias_e_value=148131	bias_p_value=0.0507739	consensus_score=21.6	fisher_strand_p_value=0.0359833	frequency=4.118e-01	ks_quality_p_value=0.246459	major_base=G	major_cov=6/24	major_frequency=5.882e-01	minor_base=A	minor_cov=0/21	new_cov=0/21	polymorphism_frequency=4.118e-01	polymorphism_score=23.6	prediction=polymorphism	ref_cov=6/24	total_cov=6/49
RA	962	.	NC_007793	320317	0	C	A	bias_e_value=325.406	bias_p_value=0.000111537	consensus_score=-3.6	fisher_strand_p_value=0.00439713	frequency=5.660e-01	ks_quality_p_value=0.00200713	major_base=A	major_cov=0/30	major_frequency=5.660e-01	minor_base=C	minor_cov=6/17	new_cov=0/30	polymorphism_frequency=5.660e-01	polymorphism_score=45.4	prediction=polymorphism	ref_cov=6/17	total_cov=6/49
RA	963	.	NC_007793	320321	0	T	A	bias_e_value=1322830	bias_p_value=0.453419	consensus_score=51.9	fisher_strand_p_value=0.160112	frequency=3.077e-01	ks_quality_p_value=1	major_base=T	major_cov=6/30	major_frequency=6.923e-01	minor_base=A	minor_cov=0/16	new_cov=0/16	polymorphism_frequency=3.077e-01	polymorphism_score=14.0	prediction=polymorphism	ref_cov=6/30	total_cov=6/46
RA	964	.	NC_007793	328214	0	A	G	consensus_score=34.6	frequency=1	major_base=G	major_cov=15/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=15/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=15/0
RA	965	.	NC_007793	345030	0	A	G	consensus_score=62.0	frequency=1	major_base=G	major_cov=18/6	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=18/6	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=18/6
RA	966	.	NC_007793	349857	0	G	A	consensus_score=38.6	frequency=1	major_base=A	major_cov=16/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=16/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=16/0
RA	967	.	NC_007793	356294	0	T	C	consensus_score=209.2	frequency=1	major_base=C	major_cov=2/74	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/74	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/74
RA	968	.	NC_007793	372740	0	T	C	bias_e_value=2917430	bias_p_value=0.999985	consensus_score=1075.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.994582	major_base=C	major_cov=392/14	major_frequency=9.951e-01	minor_base=T	minor_cov=2/0	new_cov=392/14	polymorphism_frequency=9.951e-01	polymorphism_score=-6.2	prediction=consensus	ref_cov=2/0	total_cov=394/14
RA	969	.	NC_007793	374582	0	A	G	consensus_score=65.6	frequency=1	major_base=G	major_cov=22/3	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=22/3	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=22/3
RA	970	.	NC_007793	376057	0	C	T	consensus_score=42.8	frequency=1	major_base=T	major_cov=4/13	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=4/13	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=4/13
RA	971	.	NC_007793	376231	0	T	G	consensus_score=38.4	frequency=1	major_base=G	major_cov=2/15	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/15	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/15
RA	972	.	NC_007793	380670	0	C	T	bias_e_value=880798	bias_p_value=0.301905	consensus_score=18.0	fisher_strand_p_value=0.133333	frequency=1	ks_quality_p_value=0.660086	major_base=T	major_cov=13/0	major_frequency=8.667e-01	minor_base=C	minor_cov=1/1	new_cov=13/0	polymorphism_frequency=8.667e-01	polymorphism_score=-3.8	prediction=consensus	ref_cov=1/1	total_cov=14/1
RA	973	.	NC_007793	381188	0	A	G	consensus_score=169.4	frequency=1	major_base=G	major_cov=61/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=61/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=61/0
RA	974	.	NC_007793	382348	0	C	T	bias_e_value=2907100	bias_p_value=0.996445	consensus_score=85.7	fisher_strand_p_value=1	frequency=2.034e-01	ks_quality_p_value=0.91687	major_base=C	major_cov=47/0	major_frequency=7.966e-01	minor_base=T	minor_cov=12/0	new_cov=12/0	polymorphism_frequency=2.034e-01	polymorphism_score=16.7	prediction=polymorphism	ref_cov=47/0	total_cov=59/0
RA	975	.	NC_007793	402035	0	A	G	consensus_score=66.7	frequency=1	major_base=G	major_cov=26/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=26/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=26/1
RA	976	.	NC_007793	402167	0	G	A	consensus_score=100.7	frequency=1	major_base=A	major_cov=39/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=39/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=39/0
RA	977	.	NC_007793	402447	0	C	T	consensus_score=56.1	frequency=1	major_base=T	major_cov=21/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=21/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=21/0
RA	978	.	NC_007793	407945	0	C	T	consensus_score=90.2	frequency=1	major_base=T	major_cov=0/35	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/35	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/35
RA	979	.	NC_007793	414724	0	C	T	consensus_score=138.7	frequency=1	major_base=T	major_cov=1/51	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/51	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/51
RA	980	.	NC_007793	415546	0	G	A	consensus_score=206.2	frequency=1	major_base=A	major_cov=72/2	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=72/2	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=72/2
RA	981	.	NC_007793	429073	0	C	T	bias_e_value=493608	bias_p_value=0.169191	consensus_score=2740.7	fisher_strand_p_value=0.0401354	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=9/970	major_frequency=9.959e-01	minor_base=G	minor_cov=1/3	new_cov=9/970	polymorphism_frequency=9.959e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=11/973
RA	982	.	NC_007793	429734	0	C	A	bias_e_value=2917470	bias_p_value=1	consensus_score=8410.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.999999	major_base=A	major_cov=227/2631	major_frequency=9.986e-01	minor_base=G	minor_cov=0/4	new_cov=227/2631	polymorphism_frequency=9.986e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=228/2636
RA	983	.	NC_007793	432732	1	.	T	bias_e_value=2769740	bias_p_value=0.949364	consensus_score=51.3	fisher_strand_p_value=1	frequency=2.647e-01	ks_quality_p_value=0.699137	major_base=.	major_cov=2/23	major_frequency=7.353e-01	minor_base=T	minor_cov=0/9	new_cov=0/9	polymorphism_frequency=2.647e-01	polymorphism_score=29.9	prediction=polymorphism	ref_cov=2/23	total_cov=2/32
RA	984	.	NC_007793	438556	0	T	G	bias_e_value=44139.8	bias_p_value=0.0151295	consensus_score=588.9	fisher_strand_p_value=0.00211319	frequency=4.070e-01	ks_quality_p_value=1	major_base=T	major_cov=396/12	major_frequency=5.930e-01	minor_base=G	minor_cov=280/0	new_cov=280/0	polymorphism_frequency=4.070e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=396/12	total_cov=728/12
RA	985	.	NC_007793	438559	0	T	G	bias_e_value=784613	bias_p_value=0.268936	consensus_score=1211.7	fisher_strand_p_value=0.0748711	frequency=2.567e-01	ks_quality_p_value=1	major_base=T	major_cov=519/11	major_frequency=7.433e-01	minor_base=G	minor_cov=183/0	new_cov=183/0	polymorphism_frequency=2.567e-01	polymorphism_score=93.5	prediction=polymorphism	ref_cov=519/11	total_cov=723/11
RA	986	.	NC_007793	438565	0	T	G	bias_e_value=516354	bias_p_value=0.176987	consensus_score=1130.9	fisher_strand_p_value=0.0425828	frequency=2.666e-01	ks_quality_p_value=1	major_base=T	major_cov=520/11	major_frequency=7.334e-01	minor_base=G	minor_cov=193/0	new_cov=193/0	polymorphism_frequency=2.666e-01	polymorphism_score=157.4	prediction=polymorphism	ref_cov=520/11	total_cov=751/11
RA	987	.	NC_007793	441126	0	G	A	bias_e_value=18737.6	bias_p_value=0.00642255	consensus_score=475.8	fisher_strand_p_value=0.0113689	frequency=3.229e-01	ks_quality_p_value=0.0693548	major_base=G	major_cov=313/12	major_frequency=6.771e-01	minor_base=A	minor_cov=155/0	new_cov=155/0	polymorphism_frequency=3.229e-01	polymorphism_score=300.9	prediction=polymorphism	ref_cov=313/12	total_cov=468/12
RA	988	.	NC_007793	444307	0	C	G	consensus_score=10.1	frequency=1	major_base=G	major_cov=6/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=6/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=6/0
RA	989	.	NC_007793	444723	0	C	A	consensus_score=29.3	frequency=1	major_base=A	major_cov=6/6	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=6/6	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=6/6
RA	990	.	NC_007793	454603	0	G	A	consensus_score=19.6	frequency=1	major_base=A	major_cov=9/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=9/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=9/0
RA	991	.	NC_007793	459103	1	.	G	bias_e_value=138363	bias_p_value=0.0474256	consensus_score=302.2	fisher_strand_p_value=0.199598	frequency=2.110e-01	ks_quality_p_value=0.0409115	major_base=.	major_cov=77/9	major_frequency=7.890e-01	minor_base=G	minor_cov=23/0	new_cov=23/0	polymorphism_frequency=2.110e-01	polymorphism_score=83.0	prediction=polymorphism	ref_cov=77/9	total_cov=100/9
RA	992	.	NC_007793	459106	0	G	C	bias_e_value=45590.3	bias_p_value=0.0156266	consensus_score=236.6	fisher_strand_p_value=0.111794	frequency=2.393e-01	ks_quality_p_value=0.0196267	major_base=G	major_cov=80/9	major_frequency=7.607e-01	minor_base=C	minor_cov=28/0	new_cov=28/0	polymorphism_frequency=2.393e-01	polymorphism_score=69.9	prediction=polymorphism	ref_cov=80/9	total_cov=108/9
RA	993	.	NC_007793	462816	0	T	A	bias_e_value=2720080	bias_p_value=0.932344	consensus_score=481.9	fisher_strand_p_value=1	frequency=2.464e-01	ks_quality_p_value=0.655474	major_base=T	major_cov=205/3	major_frequency=7.536e-01	minor_base=A	minor_cov=68/0	new_cov=68/0	polymorphism_frequency=2.464e-01	polymorphism_score=144.8	prediction=polymorphism	ref_cov=205/3	total_cov=291/3
RA	994	.	NC_007793	462819	0	A	T	bias_e_value=656721	bias_p_value=0.225099	consensus_score=-5.9	fisher_strand_p_value=0.109857	frequency=5.102e-01	ks_quality_p_value=0.534225	major_base=T	major_cov=25/0	major_frequency=5.102e-01	minor_base=A	minor_cov=21/3	new_cov=25/0	polymorphism_frequency=5.102e-01	polymorphism_score=59.7	prediction=polymorphism	ref_cov=21/3	total_cov=47/3
RA	995	.	NC_007793	478151	0	G	C	bias_e_value=2917470	bias_p_value=1	consensus_score=61.7	fisher_strand_p_value=1	frequency=2.368e-01	ks_quality_p_value=1	major_base=G	major_cov=26/3	major_frequency=7.632e-01	minor_base=C	minor_cov=9/0	new_cov=9/0	polymorphism_frequency=2.368e-01	polymorphism_score=10.5	prediction=polymorphism	ref_cov=26/3	total_cov=36/3
RA	996	.	NC_007793	479782	0	A	.	bias_e_value=2092440	bias_p_value=0.717211	consensus_score=153.3	fisher_strand_p_value=0.553845	frequency=2.817e-01	ks_quality_p_value=0.631556	major_base=A	major_cov=48/3	major_frequency=7.183e-01	minor_base=.	minor_cov=20/0	new_cov=20/0	polymorphism_frequency=2.817e-01	polymorphism_score=56.2	prediction=polymorphism	ref_cov=48/3	total_cov=70/3
RA	997	.	NC_007793	479868	0	T	C	bias_e_value=2917470	bias_p_value=1	consensus_score=3441.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.99999	major_base=C	major_cov=1266/14	major_frequency=9.984e-01	minor_base=A	minor_cov=2/0	new_cov=1266/14	polymorphism_frequency=9.984e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=1269/14
RA	998	.	NC_007793	480203	0	A	C	bias_e_value=17634.1	bias_p_value=0.0060443	consensus_score=597.7	fisher_strand_p_value=0.000737063	frequency=3.213e-01	ks_quality_p_value=0.998292	major_base=A	major_cov=357/19	major_frequency=6.787e-01	minor_base=C	minor_cov=178/0	new_cov=178/0	polymorphism_frequency=3.213e-01	polymorphism_score=126.0	prediction=polymorphism	ref_cov=357/19	total_cov=554/19
RA	999	.	NC_007793	480215	0	C	A	bias_e_value=5.073	bias_p_value=1.73884e-06	consensus_score=161.5	fisher_strand_p_value=5.35711e-07	frequency=4.750e-01	ks_quality_p_value=0.189799	major_base=C	major_cov=293/22	major_frequency=5.250e-01	minor_base=A	minor_cov=285/0	new_cov=285/0	polymorphism_frequency=4.750e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=293/22	total_cov=583/22
RA	1000	.	NC_007793	480219	0	G	A	bias_e_value=41698.7	bias_p_value=0.0142928	consensus_score=612.9	fisher_strand_p_value=0.00197806	frequency=2.633e-01	ks_quality_p_value=1	major_base=G	major_cov=392/22	major_frequency=7.367e-01	minor_base=A	minor_cov=148/0	new_cov=148/0	polymorphism_frequency=2.633e-01	polymorphism_score=196.5	prediction=polymorphism	ref_cov=392/22	total_cov=571/22
RA	1001	.	NC_007793	480224	0	T	A	bias_e_value=1634.45	bias_p_value=0.000560228	consensus_score=533.8	fisher_strand_p_value=5.15223e-05	frequency=3.607e-01	ks_quality_p_value=1	major_base=T	major_cov=329/22	major_frequency=6.393e-01	minor_base=A	minor_cov=198/0	new_cov=198/0	polymorphism_frequency=3.607e-01	polymorphism_score=224.5	prediction=polymorphism	ref_cov=329/22	total_cov=533/22
RA	1002	.	NC_007793	480236	0	T	A	bias_e_value=22428.1	bias_p_value=0.00768752	consensus_score=740.5	fisher_strand_p_value=0.000968192	frequency=2.797e-01	ks_quality_p_value=1	major_base=T	major_cov=305/22	major_frequency=7.203e-01	minor_base=A	minor_cov=127/0	new_cov=127/0	polymorphism_frequency=2.797e-01	polymorphism_score=87.8	prediction=polymorphism	ref_cov=305/22	total_cov=434/22
RA	1003	.	NC_007793	480242	0	C	A	bias_e_value=11860.1	bias_p_value=0.00406521	consensus_score=611.2	fisher_strand_p_value=0.000469179	frequency=3.057e-01	ks_quality_p_value=1	major_base=C	major_cov=281/21	major_frequency=6.943e-01	minor_base=A	minor_cov=133/0	new_cov=133/0	polymorphism_frequency=3.057e-01	polymorphism_score=156.0	prediction=polymorphism	ref_cov=281/21	total_cov=415/21
RA	1004	.	NC_007793	480476	0	T	C	consensus_score=329.2	frequency=1	major_base=C	major_cov=121/4	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=121/4	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=121/4
RA	1005	.	NC_007793	482289	0	A	G	bias_e_value=913454	bias_p_value=0.313098	consensus_score=31.6	fisher_strand_p_value=0.539421	frequency=3.256e-01	ks_quality_p_value=0.17179	major_base=A	major_cov=26/3	major_frequency=6.744e-01	minor_base=G	minor_cov=14/0	new_cov=14/0	polymorphism_frequency=3.256e-01	polymorphism_score=24.6	prediction=polymorphism	ref_cov=26/3	total_cov=40/3
RA	1006	.	NC_007793	482290	0	T	A	bias_e_value=581468	bias_p_value=0.199306	consensus_score=40.3	fisher_strand_p_value=0.539024	frequency=3.333e-01	ks_quality_p_value=0.0924625	major_base=T	major_cov=25/3	major_frequency=6.667e-01	minor_base=A	minor_cov=14/0	new_cov=14/0	polymorphism_frequency=3.333e-01	polymorphism_score=29.2	prediction=polymorphism	ref_cov=25/3	total_cov=39/3
RA	1007	.	NC_007793	482292	0	T	C	bias_e_value=257396	bias_p_value=0.0882256	consensus_score=37.8	fisher_strand_p_value=0.539024	frequency=3.333e-01	ks_quality_p_value=0.0324332	major_base=T	major_cov=25/3	major_frequency=6.667e-01	minor_base=C	minor_cov=14/0	new_cov=14/0	polymorphism_frequency=3.333e-01	polymorphism_score=21.8	prediction=polymorphism	ref_cov=25/3	total_cov=39/3
RA	1008	.	NC_007793	482297	0	A	G	bias_e_value=1339280	bias_p_value=0.459054	consensus_score=40.8	fisher_strand_p_value=0.286103	frequency=3.256e-01	ks_quality_p_value=0.57044	major_base=A	major_cov=25/4	major_frequency=6.744e-01	minor_base=G	minor_cov=14/0	new_cov=14/0	polymorphism_frequency=3.256e-01	polymorphism_score=21.9	prediction=polymorphism	ref_cov=25/4	total_cov=39/4
RA	1009	.	NC_007793	482985	0	T	C	bias_e_value=136002	bias_p_value=0.0466166	consensus_score=123.3	fisher_strand_p_value=1	frequency=2.000e-01	ks_quality_p_value=0.00799794	major_base=T	major_cov=54/2	major_frequency=8.000e-01	minor_base=C	minor_cov=14/0	new_cov=14/0	polymorphism_frequency=2.000e-01	polymorphism_score=16.9	prediction=polymorphism	ref_cov=54/2	total_cov=68/2
RA	1010	.	NC_007793	495541	0	C	T	consensus_score=46.9	frequency=1	major_base=T	major_cov=0/18	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/18	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/18
RA	1011	.	NC_007793	501449	0	G	A	consensus_score=66.4	frequency=1	major_base=A	major_cov=26/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=26/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=26/1
RA	1012	.	NC_007793	502496	0	G	A	bias_e_value=2917470	bias_p_value=1	consensus_score=51.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=20/1	major_frequency=9.545e-01	minor_base=T	minor_cov=1/0	new_cov=20/1	polymorphism_frequency=9.545e-01	polymorphism_score=-6.1	prediction=consensus	ref_cov=0/0	total_cov=21/1
RA	1013	.	NC_007793	503675	0	A	T	bias_e_value=2917470	bias_p_value=1	consensus_score=49.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=23/0	major_frequency=8.214e-01	minor_base=A	minor_cov=5/0	new_cov=23/0	polymorphism_frequency=8.214e-01	polymorphism_score=4.1	prediction=consensus	ref_cov=5/0	total_cov=31/0
RA	1014	.	NC_007793	508322	0	T	A	bias_e_value=12.266	bias_p_value=4.20433e-06	consensus_score=2210.3	fisher_strand_p_value=2.60136e-07	frequency=3.264e-01	ks_quality_p_value=1	major_base=T	major_cov=1176/46	major_frequency=6.736e-01	minor_base=A	minor_cov=591/1	new_cov=591/1	polymorphism_frequency=3.264e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=1176/46	total_cov=1774/47
RA	1015	.	NC_007793	508324	1	.	T	bias_e_value=14.9523	bias_p_value=5.12511e-06	consensus_score=3184.6	fisher_strand_p_value=0.00137119	frequency=2.109e-01	ks_quality_p_value=0.000234326	major_base=.	major_cov=1165/40	major_frequency=7.891e-01	minor_base=T	minor_cov=321/1	new_cov=321/1	polymorphism_frequency=2.109e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=1165/40	total_cov=1486/41
RA	1016	.	NC_007793	508670	0	A	G	consensus_score=51.1	frequency=1	major_base=G	major_cov=20/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=20/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=20/0
RA	1017	.	NC_007793	509629	0	G	C	consensus_score=244.6	frequency=1	major_base=C	major_cov=91/2	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=91/2	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=91/2
RA	1018	.	NC_007793	514591	0	A	.	consensus_score=17.5	deleted=1	frequency=1	major_base=.	major_cov=7/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=7/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=7/0
RA	1019	.	NC_007793	519306	0	T	C	consensus_score=40.6	frequency=1	major_base=C	major_cov=17/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=17/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=17/0
RA	1020	.	NC_007793	521024	0	T	A	bias_e_value=359979	bias_p_value=0.123387	consensus_score=186.5	fisher_strand_p_value=0.317115	frequency=2.993e-01	ks_quality_p_value=0.0841538	major_base=T	major_cov=99/4	major_frequency=7.007e-01	minor_base=A	minor_cov=44/0	new_cov=44/0	polymorphism_frequency=2.993e-01	polymorphism_score=98.1	prediction=polymorphism	ref_cov=99/4	total_cov=144/4
RA	1021	.	NC_007793	521025	0	G	T	bias_e_value=144167	bias_p_value=0.049415	consensus_score=186.1	fisher_strand_p_value=0.323046	frequency=2.905e-01	ks_quality_p_value=0.0265653	major_base=G	major_cov=101/4	major_frequency=7.095e-01	minor_base=T	minor_cov=43/0	new_cov=43/0	polymorphism_frequency=2.905e-01	polymorphism_score=105.0	prediction=polymorphism	ref_cov=101/4	total_cov=144/4
RA	1022	.	NC_007793	521750	0	A	G	bias_e_value=2917470	bias_p_value=1	consensus_score=83.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=33/0	major_frequency=9.706e-01	minor_base=A	minor_cov=1/0	new_cov=33/0	polymorphism_frequency=9.706e-01	polymorphism_score=-5.7	prediction=consensus	ref_cov=1/0	total_cov=34/0
RA	1023	.	NC_007793	524987	0	C	T	consensus_score=94.0	frequency=1	major_base=T	major_cov=25/10	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=25/10	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=25/10
RA	1024	.	NC_007793	525615	0	A	.	bias_e_value=2917310	bias_p_value=0.999946	consensus_score=153.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.989601	major_base=.	major_cov=41/0	major_frequency=9.762e-01	minor_base=A	minor_cov=1/0	new_cov=41/0	polymorphism_frequency=9.762e-01	polymorphism_score=-2.5	prediction=consensus	ref_cov=1/0	total_cov=42/0
RA	1025	.	NC_007793	525978	0	T	G	bias_e_value=2704250	bias_p_value=0.926915	consensus_score=500.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.642908	major_base=G	major_cov=189/2	major_frequency=9.948e-01	minor_base=A	minor_cov=1/0	new_cov=189/2	polymorphism_frequency=9.948e-01	polymorphism_score=-5.6	prediction=consensus	ref_cov=0/0	total_cov=190/2
RA	1026	.	NC_007793	527779	0	T	C	bias_e_value=700158	bias_p_value=0.239988	consensus_score=503.6	fisher_strand_p_value=0.128827	frequency=2.336e-01	ks_quality_p_value=0.496961	major_base=T	major_cov=204/29	major_frequency=7.664e-01	minor_base=C	minor_cov=67/4	new_cov=67/4	polymorphism_frequency=2.336e-01	polymorphism_score=114.2	prediction=polymorphism	ref_cov=204/29	total_cov=305/36
RA	1027	.	NC_007793	529026	0	A	C	bias_e_value=2917460	bias_p_value=0.999997	consensus_score=148.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.997665	major_base=C	major_cov=54/4	major_frequency=9.831e-01	minor_base=A	minor_cov=1/0	new_cov=54/4	polymorphism_frequency=9.831e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=55/4
RA	1028	.	NC_007793	529067	0	C	T	bias_e_value=2917470	bias_p_value=1	consensus_score=143.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.999246	major_base=T	major_cov=45/6	major_frequency=9.808e-01	minor_base=G	minor_cov=1/0	new_cov=45/6	polymorphism_frequency=9.808e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=46/6
RA	1029	.	NC_007793	533280	0	T	C	bias_e_value=2843770	bias_p_value=0.974738	consensus_score=120.5	fisher_strand_p_value=1	frequency=2.329e-01	ks_quality_p_value=0.783815	major_base=T	major_cov=55/1	major_frequency=7.671e-01	minor_base=C	minor_cov=17/0	new_cov=17/0	polymorphism_frequency=2.329e-01	polymorphism_score=23.5	prediction=polymorphism	ref_cov=55/1	total_cov=93/1
RA	1030	.	NC_007793	542171	0	T	C	consensus_score=301.0	frequency=1	major_base=C	major_cov=102/12	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=102/12	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=102/12
RA	1031	.	NC_007793	542249	0	A	G	bias_e_value=2171480	bias_p_value=0.744304	consensus_score=103.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.376525	major_base=G	major_cov=35/6	major_frequency=9.762e-01	minor_base=A	minor_cov=1/0	new_cov=35/6	polymorphism_frequency=9.762e-01	polymorphism_score=-4.8	prediction=consensus	ref_cov=1/0	total_cov=36/6
RA	1032	.	NC_007793	543897	0	T	A	consensus_score=1210.4	frequency=1	major_base=A	major_cov=423/7	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=423/7	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=423/7
RA	1033	.	NC_007793	545208	0	C	T	bias_e_value=2917470	bias_p_value=1	consensus_score=178.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.999024	major_base=T	major_cov=62/1	major_frequency=9.692e-01	minor_base=C	minor_cov=2/0	new_cov=62/1	polymorphism_frequency=9.692e-01	polymorphism_score=-3.9	prediction=consensus	ref_cov=2/0	total_cov=64/1
RA	1034	.	NC_007793	547892	0	T	G	bias_e_value=162564	bias_p_value=0.055721	consensus_score=782.0	fisher_strand_p_value=0.00992824	frequency=2.350e-01	ks_quality_p_value=1	major_base=T	major_cov=287/19	major_frequency=7.650e-01	minor_base=G	minor_cov=94/0	new_cov=94/0	polymorphism_frequency=2.350e-01	polymorphism_score=38.2	prediction=polymorphism	ref_cov=287/19	total_cov=417/19
RA	1035	.	NC_007793	547901	0	C	A	bias_e_value=261388	bias_p_value=0.0895942	consensus_score=736.5	fisher_strand_p_value=0.018022	frequency=2.103e-01	ks_quality_p_value=0.988864	major_base=C	major_cov=319/19	major_frequency=7.897e-01	minor_base=A	minor_cov=90/0	new_cov=90/0	polymorphism_frequency=2.103e-01	polymorphism_score=85.7	prediction=polymorphism	ref_cov=319/19	total_cov=430/19
RA	1036	.	NC_007793	547905	0	G	T	bias_e_value=581.219	bias_p_value=0.00019922	consensus_score=369.8	fisher_strand_p_value=4.76524e-05	frequency=4.063e-01	ks_quality_p_value=0.348201	major_base=G	major_cov=244/19	major_frequency=5.937e-01	minor_base=T	minor_cov=180/0	new_cov=180/0	polymorphism_frequency=4.063e-01	polymorphism_score=273.6	prediction=polymorphism	ref_cov=244/19	total_cov=432/19
RA	1037	.	NC_007793	547911	0	T	A	bias_e_value=80000.1	bias_p_value=0.0274211	consensus_score=555.3	fisher_strand_p_value=0.00424314	frequency=2.988e-01	ks_quality_p_value=1	major_base=T	major_cov=282/16	major_frequency=7.012e-01	minor_base=A	minor_cov=127/0	new_cov=127/0	polymorphism_frequency=2.988e-01	polymorphism_score=151.6	prediction=polymorphism	ref_cov=282/16	total_cov=422/16
RA	1038	.	NC_007793	547912	0	C	A	bias_e_value=587746	bias_p_value=0.201457	consensus_score=605.4	fisher_strand_p_value=0.0505588	frequency=2.042e-01	ks_quality_p_value=1	major_base=C	major_cov=284/16	major_frequency=7.958e-01	minor_base=A	minor_cov=77/0	new_cov=77/0	polymorphism_frequency=2.042e-01	polymorphism_score=70.5	prediction=polymorphism	ref_cov=284/16	total_cov=422/16
RA	1039	.	NC_007793	547917	0	G	A	bias_e_value=8507.15	bias_p_value=0.00291594	consensus_score=319.8	fisher_strand_p_value=0.00032259	frequency=4.019e-01	ks_quality_p_value=1	major_base=G	major_cov=237/16	major_frequency=5.981e-01	minor_base=A	minor_cov=170/0	new_cov=170/0	polymorphism_frequency=4.019e-01	polymorphism_score=222.5	prediction=polymorphism	ref_cov=237/16	total_cov=421/16
RA	1040	.	NC_007793	547924	0	T	A	bias_e_value=18805.1	bias_p_value=0.00644569	consensus_score=443.9	fisher_strand_p_value=0.000791729	frequency=3.770e-01	ks_quality_p_value=1	major_base=T	major_cov=222/16	major_frequency=6.230e-01	minor_base=A	minor_cov=144/0	new_cov=144/0	polymorphism_frequency=3.770e-01	polymorphism_score=175.0	prediction=polymorphism	ref_cov=222/16	total_cov=371/16
RA	1041	.	NC_007793	547925	0	G	A	bias_e_value=146125	bias_p_value=0.0500862	consensus_score=494.3	fisher_strand_p_value=0.00872311	frequency=2.629e-01	ks_quality_p_value=1	major_base=G	major_cov=256/16	major_frequency=7.371e-01	minor_base=A	minor_cov=97/0	new_cov=97/0	polymorphism_frequency=2.629e-01	polymorphism_score=119.5	prediction=polymorphism	ref_cov=256/16	total_cov=365/16
RA	1042	.	NC_007793	547941	0	C	A	bias_e_value=71539.5	bias_p_value=0.0245211	consensus_score=488.2	fisher_strand_p_value=0.00371844	frequency=3.166e-01	ks_quality_p_value=1	major_base=C	major_cov=216/15	major_frequency=6.834e-01	minor_base=A	minor_cov=107/0	new_cov=107/0	polymorphism_frequency=3.166e-01	polymorphism_score=167.8	prediction=polymorphism	ref_cov=216/15	total_cov=323/15
RA	1043	.	NC_007793	551019	0	G	T	bias_e_value=0.318561	bias_p_value=1.09191e-07	consensus_score=785.7	fisher_strand_p_value=0.16387	frequency=3.720e-01	ks_quality_p_value=3.32708e-08	major_base=G	major_cov=628/5	major_frequency=6.280e-01	minor_base=T	minor_cov=375/0	new_cov=375/0	polymorphism_frequency=3.720e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=628/5	total_cov=1010/5
RA	1044	.	NC_007793	555081	0	C	T	bias_e_value=2861260	bias_p_value=0.980734	consensus_score=1804.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.810236	major_base=T	major_cov=597/16	major_frequency=9.984e-01	minor_base=C	minor_cov=1/0	new_cov=597/16	polymorphism_frequency=9.984e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=598/16
RA	1045	.	NC_007793	564533	0	A	G	bias_e_value=2588160	bias_p_value=0.887125	consensus_score=445.9	fisher_strand_p_value=0.576258	frequency=2.355e-01	ks_quality_p_value=0.979099	major_base=A	major_cov=233/4	major_frequency=7.645e-01	minor_base=G	minor_cov=73/0	new_cov=73/0	polymorphism_frequency=2.355e-01	polymorphism_score=132.5	prediction=polymorphism	ref_cov=233/4	total_cov=306/4
RA	1046	.	NC_007793	564835	0	G	A	bias_e_value=427922	bias_p_value=0.146676	consensus_score=342.9	fisher_strand_p_value=0.203438	frequency=2.294e-01	ks_quality_p_value=0.163806	major_base=G	major_cov=170/8	major_frequency=7.706e-01	minor_base=A	minor_cov=53/0	new_cov=53/0	polymorphism_frequency=2.294e-01	polymorphism_score=91.8	prediction=polymorphism	ref_cov=170/8	total_cov=223/8
RA	1047	.	NC_007793	566647	0	G	T	bias_e_value=28977.5	bias_p_value=0.00993242	consensus_score=35.6	fisher_strand_p_value=1	frequency=3.250e-01	ks_quality_p_value=0.00129901	major_base=G	major_cov=27/0	major_frequency=6.750e-01	minor_base=T	minor_cov=13/0	new_cov=13/0	polymorphism_frequency=3.250e-01	polymorphism_score=28.0	prediction=polymorphism	ref_cov=27/0	total_cov=40/0
RA	1048	.	NC_007793	571607	0	A	G	bias_e_value=2917460	bias_p_value=0.999997	consensus_score=894.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.997704	major_base=G	major_cov=319/5	major_frequency=9.969e-01	minor_base=C	minor_cov=1/0	new_cov=319/5	polymorphism_frequency=9.969e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=320/5
RA	1049	.	NC_007793	579018	0	T	C	bias_e_value=2505520	bias_p_value=0.8588	consensus_score=212.9	fisher_strand_p_value=0.518106	frequency=2.555e-01	ks_quality_p_value=1	major_base=T	major_cov=90/12	major_frequency=7.445e-01	minor_base=C	minor_cov=33/2	new_cov=33/2	polymorphism_frequency=2.555e-01	polymorphism_score=50.3	prediction=polymorphism	ref_cov=90/12	total_cov=138/14
RA	1050	.	NC_007793	583396	0	G	A	bias_e_value=1.8586e-78	bias_p_value=6.37057e-85	consensus_score=745.0	fisher_strand_p_value=8.2675e-87	frequency=3.145e-01	ks_quality_p_value=0.384956	major_base=G	major_cov=367/143	major_frequency=6.855e-01	minor_base=A	minor_cov=3/231	new_cov=3/231	polymorphism_frequency=3.145e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=367/143	total_cov=370/374
RA	1051	.	NC_007793	586623	0	G	A	bias_e_value=1070810	bias_p_value=0.367033	consensus_score=99.2	fisher_strand_p_value=1	frequency=2.651e-01	ks_quality_p_value=0.116534	major_base=G	major_cov=59/2	major_frequency=7.349e-01	minor_base=A	minor_cov=22/0	new_cov=22/0	polymorphism_frequency=2.651e-01	polymorphism_score=34.8	prediction=polymorphism	ref_cov=59/2	total_cov=81/2
RA	1052	.	NC_007793	591811	0	A	G	consensus_score=340.9	frequency=1	major_base=G	major_cov=118/9	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=118/9	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=118/9
RA	1053	.	NC_007793	593859	0	T	.	bias_e_value=2917470	bias_p_value=1	consensus_score=16676.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=.	major_cov=4147/43	major_frequency=9.976e-01	minor_base=C	minor_cov=10/0	new_cov=4147/43	polymorphism_frequency=9.976e-01	polymorphism_score=18.9	prediction=consensus	ref_cov=7/0	total_cov=4168/43
RA	1054	.	NC_007793	595026	0	C	T	bias_e_value=2021870	bias_p_value=0.693021	consensus_score=923.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.327449	major_base=T	major_cov=237/80	major_frequency=9.937e-01	minor_base=C	minor_cov=2/0	new_cov=237/80	polymorphism_frequency=9.937e-01	polymorphism_score=-5.5	prediction=consensus	ref_cov=2/0	total_cov=239/80
RA	1055	.	NC_007793	597939	0	G	A	bias_e_value=5.56889e-06	bias_p_value=1.90881e-12	consensus_score=65.5	fisher_strand_p_value=3.00785e-13	frequency=2.500e-01	ks_quality_p_value=0.201897	major_base=G	major_cov=44/1	major_frequency=7.500e-01	minor_base=A	minor_cov=0/15	new_cov=0/15	polymorphism_frequency=2.500e-01	polymorphism_score=27.2	prediction=polymorphism	ref_cov=44/1	total_cov=45/25
RA	1056	.	NC_007793	597944	0	T	C	bias_e_value=2.67621e-08	bias_p_value=9.17304e-15	consensus_score=52.8	fisher_strand_p_value=2.65293e-16	frequency=3.623e-01	ks_quality_p_value=0.936247	major_base=T	major_cov=43/1	major_frequency=6.377e-01	minor_base=C	minor_cov=1/24	new_cov=1/24	polymorphism_frequency=3.623e-01	polymorphism_score=45.9	prediction=polymorphism	ref_cov=43/1	total_cov=44/25
RA	1057	.	NC_007793	601778	0	T	G	bias_e_value=135938	bias_p_value=0.0465945	consensus_score=448.3	fisher_strand_p_value=0.00799337	frequency=2.590e-01	ks_quality_p_value=1	major_base=T	major_cov=169/17	major_frequency=7.410e-01	minor_base=G	minor_cov=65/0	new_cov=65/0	polymorphism_frequency=2.590e-01	polymorphism_score=123.6	prediction=polymorphism	ref_cov=169/17	total_cov=234/17
RA	1058	.	NC_007793	605775	0	T	G	bias_e_value=48579.9	bias_p_value=0.0166514	consensus_score=468.5	fisher_strand_p_value=0.00236257	frequency=2.898e-01	ks_quality_p_value=1	major_base=T	major_cov=183/18	major_frequency=7.102e-01	minor_base=G	minor_cov=82/0	new_cov=82/0	polymorphism_frequency=2.898e-01	polymorphism_score=48.4	prediction=polymorphism	ref_cov=183/18	total_cov=271/18
RA	1059	.	NC_007793	612922	0	C	T	bias_e_value=524472	bias_p_value=0.17977	consensus_score=55.5	fisher_strand_p_value=0.675103	frequency=1	ks_quality_p_value=0.0643861	major_base=T	major_cov=48/12	major_frequency=8.571e-01	minor_base=C	minor_cov=9/1	new_cov=48/12	polymorphism_frequency=8.571e-01	polymorphism_score=10.2	prediction=consensus	ref_cov=9/1	total_cov=57/13
RA	1060	.	NC_007793	612932	0	A	T	bias_e_value=12777.3	bias_p_value=0.00437958	consensus_score=812.5	fisher_strand_p_value=0.29919	frequency=1	ks_quality_p_value=0.00170602	major_base=T	major_cov=543/17	major_frequency=9.807e-01	minor_base=A	minor_cov=10/1	new_cov=543/17	polymorphism_frequency=9.807e-01	polymorphism_score=4.2	prediction=consensus	ref_cov=10/1	total_cov=553/19
RA	1061	.	NC_007793	612933	0	T	G	bias_e_value=726.87	bias_p_value=0.000249144	consensus_score=815.8	fisher_strand_p_value=0.331607	frequency=1	ks_quality_p_value=6.38749e-05	major_base=G	major_cov=551/18	major_frequency=9.793e-01	minor_base=T	minor_cov=11/1	new_cov=551/18	polymorphism_frequency=9.793e-01	polymorphism_score=11.3	prediction=consensus	ref_cov=11/1	total_cov=562/19
RA	1062	.	NC_007793	612937	0	A	T	bias_e_value=34365.1	bias_p_value=0.0117791	consensus_score=1076.4	fisher_strand_p_value=0.301949	frequency=1	ks_quality_p_value=0.00523655	major_base=T	major_cov=718/21	major_frequency=9.840e-01	minor_base=A	minor_cov=11/1	new_cov=718/21	polymorphism_frequency=9.840e-01	polymorphism_score=5.1	prediction=consensus	ref_cov=11/1	total_cov=729/22
RA	1063	.	NC_007793	612961	0	A	G	bias_e_value=83449.8	bias_p_value=0.0286035	consensus_score=1062.6	fisher_strand_p_value=0.372464	frequency=1	ks_quality_p_value=0.0119759	major_base=G	major_cov=722/22	major_frequency=9.802e-01	minor_base=A	minor_cov=14/1	new_cov=722/22	polymorphism_frequency=9.802e-01	polymorphism_score=5.4	prediction=consensus	ref_cov=14/1	total_cov=738/23
RA	1064	.	NC_007793	612962	1	.	C	bias_e_value=1981690	bias_p_value=0.679251	consensus_score=1087.7	fisher_strand_p_value=0.332603	frequency=1	ks_quality_p_value=0.948033	major_base=C	major_cov=722/22	major_frequency=9.828e-01	minor_base=.	minor_cov=12/1	new_cov=722/22	polymorphism_frequency=9.828e-01	polymorphism_score=25.5	prediction=consensus	ref_cov=12/1	total_cov=737/23
RA	1065	.	NC_007793	612962	2	.	T	bias_e_value=1869740	bias_p_value=0.640878	consensus_score=1116.0	fisher_strand_p_value=0.332238	frequency=1	ks_quality_p_value=0.853335	major_base=T	major_cov=723/22	major_frequency=9.828e-01	minor_base=.	minor_cov=12/1	new_cov=723/22	polymorphism_frequency=9.828e-01	polymorphism_score=18.2	prediction=consensus	ref_cov=12/1	total_cov=737/23
RA	1066	.	NC_007793	612962	3	.	T	bias_e_value=2195650	bias_p_value=0.752587	consensus_score=1119.9	fisher_strand_p_value=0.391456	frequency=1	ks_quality_p_value=0.983778	major_base=T	major_cov=722/22	major_frequency=9.789e-01	minor_base=.	minor_cov=15/1	new_cov=722/22	polymorphism_frequency=9.789e-01	polymorphism_score=25.2	prediction=consensus	ref_cov=15/1	total_cov=737/23
RA	1067	.	NC_007793	612964	0	A	T	bias_e_value=1891350	bias_p_value=0.648284	consensus_score=1092.4	fisher_strand_p_value=0.289435	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=724/22	major_frequency=9.855e-01	minor_base=A	minor_cov=10/1	new_cov=724/22	polymorphism_frequency=9.855e-01	polymorphism_score=4.8	prediction=consensus	ref_cov=10/1	total_cov=735/23
RA	1068	.	NC_007793	612970	0	T	C	bias_e_value=706503	bias_p_value=0.242163	consensus_score=1771.6	fisher_strand_p_value=0.263256	frequency=1	ks_quality_p_value=0.246205	major_base=C	major_cov=1027/31	major_frequency=9.906e-01	minor_base=T	minor_cov=9/1	new_cov=1027/31	polymorphism_frequency=9.906e-01	polymorphism_score=-0.3	prediction=consensus	ref_cov=9/1	total_cov=1037/32
RA	1069	.	NC_007793	612973	0	T	C	bias_e_value=1611030	bias_p_value=0.5522	consensus_score=1845.5	fisher_strand_p_value=0.245374	frequency=1	ks_quality_p_value=0.894147	major_base=C	major_cov=1066/33	major_frequency=9.919e-01	minor_base=T	minor_cov=8/1	new_cov=1066/33	polymorphism_frequency=9.919e-01	polymorphism_score=-1.0	prediction=consensus	ref_cov=8/1	total_cov=1074/34
RA	1070	.	NC_007793	612988	0	T	A	bias_e_value=1643870	bias_p_value=0.563457	consensus_score=1922.4	fisher_strand_p_value=0.244207	frequency=1	ks_quality_p_value=0.929153	major_base=A	major_cov=1072/33	major_frequency=9.919e-01	minor_base=T	minor_cov=8/1	new_cov=1072/33	polymorphism_frequency=9.919e-01	polymorphism_score=1.5	prediction=consensus	ref_cov=8/1	total_cov=1080/34
RA	1071	.	NC_007793	612997	0	C	T	bias_e_value=1504500	bias_p_value=0.515686	consensus_score=1924.9	fisher_strand_p_value=0.19617	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=1070/33	major_frequency=9.937e-01	minor_base=C	minor_cov=6/1	new_cov=1070/33	polymorphism_frequency=9.937e-01	polymorphism_score=-5.6	prediction=consensus	ref_cov=6/1	total_cov=1077/34
RA	1072	.	NC_007793	612998	0	A	T	bias_e_value=1355750	bias_p_value=0.464701	consensus_score=1947.8	fisher_strand_p_value=0.170627	frequency=1	ks_quality_p_value=0.974852	major_base=T	major_cov=1071/33	major_frequency=9.946e-01	minor_base=A	minor_cov=5/1	new_cov=1071/33	polymorphism_frequency=9.946e-01	polymorphism_score=-1.5	prediction=consensus	ref_cov=5/1	total_cov=1078/34
RA	1073	.	NC_007793	612999	0	G	C	bias_e_value=1353160	bias_p_value=0.463814	consensus_score=1885.1	fisher_strand_p_value=0.165842	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=1073/32	major_frequency=9.946e-01	minor_base=G	minor_cov=5/1	new_cov=1073/32	polymorphism_frequency=9.946e-01	polymorphism_score=-0.2	prediction=consensus	ref_cov=5/1	total_cov=1078/34
RA	1074	.	NC_007793	613013	0	A	T	bias_e_value=1039140	bias_p_value=0.356179	consensus_score=1802.3	fisher_strand_p_value=0.112354	frequency=1	ks_quality_p_value=0.992716	major_base=T	major_cov=987/16	major_frequency=9.931e-01	minor_base=A	minor_cov=6/1	new_cov=987/16	polymorphism_frequency=9.931e-01	polymorphism_score=-1.0	prediction=consensus	ref_cov=6/1	total_cov=993/17
RA	1075	.	NC_007793	613015	0	A	C	bias_e_value=1026820	bias_p_value=0.351954	consensus_score=1736.2	fisher_strand_p_value=0.11246	frequency=1	ks_quality_p_value=0.974721	major_base=C	major_cov=986/16	major_frequency=9.931e-01	minor_base=A	minor_cov=6/1	new_cov=986/16	polymorphism_frequency=9.931e-01	polymorphism_score=1.6	prediction=consensus	ref_cov=6/1	total_cov=993/17
RA	1076	.	NC_007793	613021	0	T	C	bias_e_value=2898740	bias_p_value=0.99358	consensus_score=763.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.888845	major_base=C	major_cov=354/12	major_frequency=9.865e-01	minor_base=T	minor_cov=5/0	new_cov=354/12	polymorphism_frequency=9.865e-01	polymorphism_score=-1.9	prediction=consensus	ref_cov=5/0	total_cov=360/12
RA	1077	.	NC_007793	613022	0	T	A	bias_e_value=1805670	bias_p_value=0.618917	consensus_score=806.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.266502	major_base=A	major_cov=354/12	major_frequency=9.865e-01	minor_base=T	minor_cov=5/0	new_cov=354/12	polymorphism_frequency=9.865e-01	polymorphism_score=0.4	prediction=consensus	ref_cov=5/0	total_cov=360/12
RA	1078	.	NC_007793	613023	0	C	A	bias_e_value=2037140	bias_p_value=0.698257	consensus_score=803.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.332169	major_base=A	major_cov=353/12	major_frequency=9.865e-01	minor_base=C	minor_cov=5/0	new_cov=353/12	polymorphism_frequency=9.865e-01	polymorphism_score=1.7	prediction=consensus	ref_cov=5/0	total_cov=360/12
RA	1079	.	NC_007793	613024	0	G	T	bias_e_value=2881390	bias_p_value=0.987634	consensus_score=840.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.846916	major_base=T	major_cov=353/12	major_frequency=9.812e-01	minor_base=G	minor_cov=7/0	new_cov=353/12	polymorphism_frequency=9.812e-01	polymorphism_score=4.1	prediction=consensus	ref_cov=7/0	total_cov=360/12
RA	1080	.	NC_007793	613025	0	A	G	bias_e_value=2903930	bias_p_value=0.995358	consensus_score=801.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.90521	major_base=G	major_cov=351/12	major_frequency=9.758e-01	minor_base=A	minor_cov=9/0	new_cov=351/12	polymorphism_frequency=9.758e-01	polymorphism_score=1.3	prediction=consensus	ref_cov=9/0	total_cov=360/12
RA	1081	.	NC_007793	613026	0	C	A	bias_e_value=2653690	bias_p_value=0.909588	consensus_score=794.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.606115	major_base=A	major_cov=353/12	major_frequency=9.838e-01	minor_base=C	minor_cov=6/0	new_cov=353/12	polymorphism_frequency=9.838e-01	polymorphism_score=1.9	prediction=consensus	ref_cov=6/0	total_cov=360/12
RA	1082	.	NC_007793	613036	0	A	T	bias_e_value=2155210	bias_p_value=0.738727	consensus_score=804.5	fisher_strand_p_value=0.393924	frequency=1	ks_quality_p_value=0.94145	major_base=T	major_cov=376/12	major_frequency=9.628e-01	minor_base=A	minor_cov=14/1	new_cov=376/12	polymorphism_frequency=9.628e-01	polymorphism_score=1.4	prediction=consensus	ref_cov=14/1	total_cov=402/13
RA	1083	.	NC_007793	613060	0	G	A	bias_e_value=1725090	bias_p_value=0.591296	consensus_score=-6.4	fisher_strand_p_value=0.272727	frequency=7.273e-01	ks_quality_p_value=0.902783	major_base=A	major_cov=48/0	major_frequency=7.273e-01	minor_base=G	minor_cov=17/1	new_cov=48/0	polymorphism_frequency=7.273e-01	polymorphism_score=29.9	prediction=polymorphism	ref_cov=17/1	total_cov=65/1
RA	1084	.	NC_007793	613061	0	C	A	bias_e_value=1711160	bias_p_value=0.586522	consensus_score=-1.5	fisher_strand_p_value=0.245614	frequency=7.544e-01	ks_quality_p_value=0.988641	major_base=A	major_cov=43/0	major_frequency=7.544e-01	minor_base=C	minor_cov=13/1	new_cov=43/0	polymorphism_frequency=7.544e-01	polymorphism_score=30.6	prediction=polymorphism	ref_cov=13/1	total_cov=56/1
RA	1085	.	NC_007793	613064	0	A	G	bias_e_value=730842	bias_p_value=0.250506	consensus_score=21.4	fisher_strand_p_value=0.104167	frequency=1	ks_quality_p_value=0.651746	major_base=G	major_cov=43/0	major_frequency=8.958e-01	minor_base=A	minor_cov=4/1	new_cov=43/0	polymorphism_frequency=8.958e-01	polymorphism_score=2.2	prediction=consensus	ref_cov=4/1	total_cov=47/1
RA	1086	.	NC_007793	613066	0	C	T	bias_e_value=877126	bias_p_value=0.300646	consensus_score=21.6	fisher_strand_p_value=0.104167	frequency=1	ks_quality_p_value=0.839945	major_base=T	major_cov=43/0	major_frequency=8.958e-01	minor_base=C	minor_cov=4/1	new_cov=43/0	polymorphism_frequency=8.958e-01	polymorphism_score=1.0	prediction=consensus	ref_cov=4/1	total_cov=47/1
RA	1087	.	NC_007793	613067	0	G	A	bias_e_value=748089	bias_p_value=0.256417	consensus_score=22.8	fisher_strand_p_value=0.0851064	frequency=1	ks_quality_p_value=0.823688	major_base=A	major_cov=43/0	major_frequency=9.149e-01	minor_base=G	minor_cov=3/1	new_cov=43/0	polymorphism_frequency=9.149e-01	polymorphism_score=-0.1	prediction=consensus	ref_cov=3/1	total_cov=46/1
RA	1088	.	NC_007793	613068	0	A	G	bias_e_value=685295	bias_p_value=0.234894	consensus_score=22.8	fisher_strand_p_value=0.0869565	frequency=1	ks_quality_p_value=0.715049	major_base=G	major_cov=42/0	major_frequency=9.130e-01	minor_base=A	minor_cov=3/1	new_cov=42/0	polymorphism_frequency=9.130e-01	polymorphism_score=0.7	prediction=consensus	ref_cov=3/1	total_cov=46/1
RA	1089	.	NC_007793	613069	0	A	T	bias_e_value=80099.7	bias_p_value=0.0274552	consensus_score=22.2	fisher_strand_p_value=0.0869565	frequency=1	ks_quality_p_value=0.0488679	major_base=T	major_cov=42/0	major_frequency=9.130e-01	minor_base=A	minor_cov=3/1	new_cov=42/0	polymorphism_frequency=9.130e-01	polymorphism_score=2.1	prediction=consensus	ref_cov=3/1	total_cov=46/1
RA	1090	.	NC_007793	613070	0	A	G	bias_e_value=769735	bias_p_value=0.263836	consensus_score=22.5	fisher_strand_p_value=0.0851064	frequency=1	ks_quality_p_value=0.856735	major_base=G	major_cov=43/0	major_frequency=9.149e-01	minor_base=A	minor_cov=3/1	new_cov=43/0	polymorphism_frequency=9.149e-01	polymorphism_score=1.1	prediction=consensus	ref_cov=3/1	total_cov=46/1
RA	1091	.	NC_007793	613075	0	C	T	bias_e_value=832478	bias_p_value=0.285343	consensus_score=21.2	fisher_strand_p_value=0.108696	frequency=1	ks_quality_p_value=0.748002	major_base=T	major_cov=41/0	major_frequency=8.913e-01	minor_base=C	minor_cov=4/1	new_cov=41/0	polymorphism_frequency=8.913e-01	polymorphism_score=0.4	prediction=consensus	ref_cov=4/1	total_cov=47/1
RA	1092	.	NC_007793	613076	0	G	A	bias_e_value=1020260	bias_p_value=0.349709	consensus_score=20.9	fisher_strand_p_value=0.108696	frequency=1	ks_quality_p_value=0.999152	major_base=A	major_cov=41/0	major_frequency=8.913e-01	minor_base=G	minor_cov=4/1	new_cov=41/0	polymorphism_frequency=8.913e-01	polymorphism_score=0.6	prediction=consensus	ref_cov=4/1	total_cov=47/1
RA	1093	.	NC_007793	613078	0	A	C	bias_e_value=2917470	bias_p_value=1	consensus_score=23.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=41/0	major_frequency=8.723e-01	minor_base=A	minor_cov=6/0	new_cov=41/0	polymorphism_frequency=8.723e-01	polymorphism_score=7.9	prediction=consensus	ref_cov=6/0	total_cov=47/1
RA	1094	.	NC_007793	613079	0	G	A	bias_e_value=1020860	bias_p_value=0.349913	consensus_score=21.1	fisher_strand_p_value=0.108696	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=41/0	major_frequency=8.913e-01	minor_base=G	minor_cov=4/1	new_cov=41/0	polymorphism_frequency=8.913e-01	polymorphism_score=0.6	prediction=consensus	ref_cov=4/1	total_cov=47/1
RA	1095	.	NC_007793	613080	0	T	C	bias_e_value=1017140	bias_p_value=0.348636	consensus_score=19.3	fisher_strand_p_value=0.108696	frequency=1	ks_quality_p_value=0.994712	major_base=C	major_cov=41/0	major_frequency=8.913e-01	minor_base=T	minor_cov=4/1	new_cov=41/0	polymorphism_frequency=8.913e-01	polymorphism_score=1.6	prediction=consensus	ref_cov=4/1	total_cov=47/1
RA	1096	.	NC_007793	613082	0	A	T	bias_e_value=1192970	bias_p_value=0.408906	consensus_score=18.1	fisher_strand_p_value=0.145833	frequency=1	ks_quality_p_value=0.937982	major_base=T	major_cov=41/0	major_frequency=8.542e-01	minor_base=A	minor_cov=6/1	new_cov=41/0	polymorphism_frequency=8.542e-01	polymorphism_score=9.5	prediction=consensus	ref_cov=6/1	total_cov=47/1
RA	1097	.	NC_007793	613084	0	T	A	bias_e_value=1105160	bias_p_value=0.378809	consensus_score=18.4	fisher_strand_p_value=0.145833	frequency=1	ks_quality_p_value=0.837072	major_base=A	major_cov=41/0	major_frequency=8.542e-01	minor_base=T	minor_cov=6/1	new_cov=41/0	polymorphism_frequency=8.542e-01	polymorphism_score=10.0	prediction=consensus	ref_cov=6/1	total_cov=47/1
RA	1098	.	NC_007793	613085	0	G	A	bias_e_value=1105080	bias_p_value=0.37878	consensus_score=19.1	fisher_strand_p_value=0.125	frequency=1	ks_quality_p_value=0.976472	major_base=A	major_cov=42/0	major_frequency=8.750e-01	minor_base=G	minor_cov=5/1	new_cov=42/0	polymorphism_frequency=8.750e-01	polymorphism_score=4.0	prediction=consensus	ref_cov=5/1	total_cov=47/1
RA	1099	.	NC_007793	613086	0	G	A	bias_e_value=939122	bias_p_value=0.321896	consensus_score=20.4	fisher_strand_p_value=0.104167	frequency=1	ks_quality_p_value=0.925409	major_base=A	major_cov=43/0	major_frequency=8.958e-01	minor_base=G	minor_cov=4/1	new_cov=43/0	polymorphism_frequency=8.958e-01	polymorphism_score=2.2	prediction=consensus	ref_cov=4/1	total_cov=47/1
RA	1100	.	NC_007793	613087	0	T	A	bias_e_value=2915660	bias_p_value=0.99938	consensus_score=24.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.965001	major_base=A	major_cov=43/0	major_frequency=9.149e-01	minor_base=T	minor_cov=4/0	new_cov=43/0	polymorphism_frequency=9.149e-01	polymorphism_score=2.5	prediction=consensus	ref_cov=4/0	total_cov=47/1
RA	1101	.	NC_007793	613099	0	A	T	bias_e_value=1211500	bias_p_value=0.415256	consensus_score=15.9	fisher_strand_p_value=0.14	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=43/0	major_frequency=8.600e-01	minor_base=A	minor_cov=6/1	new_cov=43/0	polymorphism_frequency=8.600e-01	polymorphism_score=9.1	prediction=consensus	ref_cov=6/1	total_cov=49/1
RA	1102	.	NC_007793	613114	0	A	G	bias_e_value=253378	bias_p_value=0.0868487	consensus_score=16.6	fisher_strand_p_value=0.0171429	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=43/0	major_frequency=8.600e-01	minor_base=A	minor_cov=5/2	new_cov=43/0	polymorphism_frequency=8.600e-01	polymorphism_score=4.3	prediction=consensus	ref_cov=5/2	total_cov=48/2
RA	1103	.	NC_007793	613117	0	C	T	bias_e_value=256161	bias_p_value=0.0878023	consensus_score=15.6	fisher_strand_p_value=0.0178571	frequency=1	ks_quality_p_value=0.973156	major_base=T	major_cov=42/0	major_frequency=8.571e-01	minor_base=C	minor_cov=5/2	new_cov=42/0	polymorphism_frequency=8.571e-01	polymorphism_score=5.5	prediction=consensus	ref_cov=5/2	total_cov=48/2
RA	1104	.	NC_007793	613318	0	T	A	bias_e_value=2916360	bias_p_value=0.999621	consensus_score=15.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.972604	major_base=A	major_cov=7/1	major_frequency=8.889e-01	minor_base=G	minor_cov=1/0	new_cov=7/1	polymorphism_frequency=8.889e-01	polymorphism_score=-4.2	prediction=consensus	ref_cov=0/0	total_cov=8/1
RA	1105	.	NC_007793	613393	0	C	T	bias_e_value=1474740	bias_p_value=0.505485	consensus_score=16.0	fisher_strand_p_value=1	frequency=2.632e-01	ks_quality_p_value=0.189968	major_base=C	major_cov=28/0	major_frequency=7.368e-01	minor_base=T	minor_cov=10/0	new_cov=10/0	polymorphism_frequency=2.632e-01	polymorphism_score=15.2	prediction=polymorphism	ref_cov=28/0	total_cov=38/0
RA	1106	.	NC_007793	613418	0	T	G	bias_e_value=183127	bias_p_value=0.0627693	consensus_score=9.7	fisher_strand_p_value=0.472222	frequency=5.278e-01	ks_quality_p_value=0.0243136	major_base=G	major_cov=76/0	major_frequency=5.278e-01	minor_base=T	minor_cov=67/1	new_cov=76/0	polymorphism_frequency=5.278e-01	polymorphism_score=191.5	prediction=polymorphism	ref_cov=67/1	total_cov=143/1
RA	1107	.	NC_007793	613420	0	A	G	bias_e_value=2917470	bias_p_value=1	consensus_score=16.4	fisher_strand_p_value=1	frequency=4.444e-01	ks_quality_p_value=1	major_base=A	major_cov=79/1	major_frequency=5.556e-01	minor_base=G	minor_cov=64/0	new_cov=64/0	polymorphism_frequency=4.444e-01	polymorphism_score=115.2	prediction=polymorphism	ref_cov=79/1	total_cov=143/1
RA	1108	.	NC_007793	613423	0	C	T	bias_e_value=688853	bias_p_value=0.236113	consensus_score=87.1	fisher_strand_p_value=0.258503	frequency=2.585e-01	ks_quality_p_value=0.242232	major_base=C	major_cov=109/0	major_frequency=7.415e-01	minor_base=T	minor_cov=37/1	new_cov=37/1	polymorphism_frequency=2.585e-01	polymorphism_score=66.6	prediction=polymorphism	ref_cov=109/0	total_cov=146/1
RA	1109	.	NC_007793	613432	0	A	T	bias_e_value=1711180	bias_p_value=0.586527	consensus_score=90.2	fisher_strand_p_value=0.258503	frequency=2.585e-01	ks_quality_p_value=0.939362	major_base=A	major_cov=109/0	major_frequency=7.415e-01	minor_base=T	minor_cov=37/1	new_cov=37/1	polymorphism_frequency=2.585e-01	polymorphism_score=81.3	prediction=polymorphism	ref_cov=109/0	total_cov=146/1
RA	1110	.	NC_007793	613435	0	C	T	bias_e_value=2853500	bias_p_value=0.978074	consensus_score=27.9	fisher_strand_p_value=1	frequency=5.205e-01	ks_quality_p_value=0.798033	major_base=T	major_cov=75/1	major_frequency=5.205e-01	minor_base=C	minor_cov=70/0	new_cov=75/1	polymorphism_frequency=5.205e-01	polymorphism_score=136.8	prediction=polymorphism	ref_cov=70/0	total_cov=146/1
RA	1111	.	NC_007793	613436	0	T	G	bias_e_value=1240430	bias_p_value=0.425173	consensus_score=16.2	fisher_strand_p_value=1	frequency=6.939e-01	ks_quality_p_value=0.14509	major_base=G	major_cov=101/1	major_frequency=6.939e-01	minor_base=T	minor_cov=45/0	new_cov=101/1	polymorphism_frequency=6.939e-01	polymorphism_score=103.8	prediction=polymorphism	ref_cov=45/0	total_cov=146/1
RA	1112	.	NC_007793	613438	0	A	G	bias_e_value=1446190	bias_p_value=0.495702	consensus_score=85.9	fisher_strand_p_value=0.260274	frequency=2.603e-01	ks_quality_p_value=0.707453	major_base=A	major_cov=108/0	major_frequency=7.397e-01	minor_base=G	minor_cov=37/1	new_cov=37/1	polymorphism_frequency=2.603e-01	polymorphism_score=57.4	prediction=polymorphism	ref_cov=108/0	total_cov=146/1
RA	1113	.	NC_007793	613441	0	C	T	bias_e_value=2870830	bias_p_value=0.984015	consensus_score=82.3	fisher_strand_p_value=1	frequency=3.129e-01	ks_quality_p_value=0.826611	major_base=C	major_cov=100/1	major_frequency=6.871e-01	minor_base=T	minor_cov=46/0	new_cov=46/0	polymorphism_frequency=3.129e-01	polymorphism_score=88.8	prediction=polymorphism	ref_cov=100/1	total_cov=147/1
RA	1114	.	NC_007793	613447	0	T	C	bias_e_value=331182	bias_p_value=0.113517	consensus_score=34.9	fisher_strand_p_value=1	frequency=5.370e-01	ks_quality_p_value=0.0240011	major_base=C	major_cov=86/1	major_frequency=5.370e-01	minor_base=T	minor_cov=75/0	new_cov=86/1	polymorphism_frequency=5.370e-01	polymorphism_score=157.5	prediction=polymorphism	ref_cov=75/0	total_cov=161/1
RA	1115	.	NC_007793	613453	0	C	T	bias_e_value=2806940	bias_p_value=0.962115	consensus_score=125.1	fisher_strand_p_value=1	frequency=2.270e-01	ks_quality_p_value=0.737678	major_base=C	major_cov=125/1	major_frequency=7.730e-01	minor_base=T	minor_cov=37/0	new_cov=37/0	polymorphism_frequency=2.270e-01	polymorphism_score=61.2	prediction=polymorphism	ref_cov=125/1	total_cov=163/1
RA	1116	.	NC_007793	613454	0	T	G	bias_e_value=2130840	bias_p_value=0.730373	consensus_score=167.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.362532	major_base=G	major_cov=156/1	major_frequency=9.691e-01	minor_base=T	minor_cov=5/0	new_cov=156/1	polymorphism_frequency=9.691e-01	polymorphism_score=2.0	prediction=consensus	ref_cov=5/0	total_cov=162/1
RA	1117	.	NC_007793	613456	0	G	A	bias_e_value=2917470	bias_p_value=1	consensus_score=119.1	fisher_strand_p_value=1	frequency=7.531e-01	ks_quality_p_value=1	major_base=A	major_cov=121/1	major_frequency=7.531e-01	minor_base=G	minor_cov=40/0	new_cov=121/1	polymorphism_frequency=7.531e-01	polymorphism_score=51.4	prediction=polymorphism	ref_cov=40/0	total_cov=162/1
RA	1118	.	NC_007793	613459	0	T	C	bias_e_value=2917470	bias_p_value=1	consensus_score=128.3	fisher_strand_p_value=1	frequency=2.326e-01	ks_quality_p_value=1	major_base=T	major_cov=131/1	major_frequency=7.674e-01	minor_base=C	minor_cov=40/0	new_cov=40/0	polymorphism_frequency=2.326e-01	polymorphism_score=52.5	prediction=polymorphism	ref_cov=131/1	total_cov=172/1
RA	1119	.	NC_007793	613465	0	C	T	bias_e_value=741374	bias_p_value=0.254115	consensus_score=107.2	fisher_strand_p_value=1	frequency=2.662e-01	ks_quality_p_value=0.0692372	major_base=C	major_cov=112/1	major_frequency=7.338e-01	minor_base=T	minor_cov=41/0	new_cov=41/0	polymorphism_frequency=2.662e-01	polymorphism_score=68.7	prediction=polymorphism	ref_cov=112/1	total_cov=154/1
RA	1120	.	NC_007793	613472	0	T	G	bias_e_value=1584660	bias_p_value=0.543163	consensus_score=148.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.213496	major_base=G	major_cov=142/1	major_frequency=9.346e-01	minor_base=T	minor_cov=10/0	new_cov=142/1	polymorphism_frequency=9.346e-01	polymorphism_score=13.4	prediction=consensus	ref_cov=10/0	total_cov=153/1
RA	1121	.	NC_007793	613483	0	C	T	bias_e_value=349857	bias_p_value=0.119918	consensus_score=104.6	fisher_strand_p_value=1	frequency=2.839e-01	ks_quality_p_value=0.0257337	major_base=C	major_cov=109/2	major_frequency=7.161e-01	minor_base=T	minor_cov=44/0	new_cov=44/0	polymorphism_frequency=2.839e-01	polymorphism_score=79.8	prediction=polymorphism	ref_cov=109/2	total_cov=155/2
RA	1122	.	NC_007793	613486	0	A	T	bias_e_value=1945310	bias_p_value=0.666779	consensus_score=129.2	fisher_strand_p_value=0.304671	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=130/1	major_frequency=8.344e-01	minor_base=A	minor_cov=25/1	new_cov=130/1	polymorphism_frequency=8.344e-01	polymorphism_score=38.8	prediction=consensus	ref_cov=25/1	total_cov=156/2
RA	1123	.	NC_007793	613490	0	T	G	bias_e_value=1400890	bias_p_value=0.480173	consensus_score=121.0	fisher_strand_p_value=0.175455	frequency=1	ks_quality_p_value=0.997907	major_base=G	major_cov=118/1	major_frequency=9.084e-01	minor_base=T	minor_cov=11/1	new_cov=118/1	polymorphism_frequency=9.084e-01	polymorphism_score=17.1	prediction=consensus	ref_cov=11/1	total_cov=130/2
RA	1124	.	NC_007793	613495	0	T	C	bias_e_value=1506840	bias_p_value=0.51649	consensus_score=38.8	fisher_strand_p_value=0.196664	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=60/1	major_frequency=8.971e-01	minor_base=T	minor_cov=6/1	new_cov=60/1	polymorphism_frequency=8.971e-01	polymorphism_score=1.3	prediction=consensus	ref_cov=6/1	total_cov=66/2
RA	1125	.	NC_007793	613501	0	C	T	bias_e_value=144599	bias_p_value=0.0495633	consensus_score=23.0	fisher_strand_p_value=1	frequency=3.265e-01	ks_quality_p_value=0.00861299	major_base=C	major_cov=32/1	major_frequency=6.735e-01	minor_base=T	minor_cov=16/0	new_cov=16/0	polymorphism_frequency=3.265e-01	polymorphism_score=28.7	prediction=polymorphism	ref_cov=32/1	total_cov=49/1
RA	1126	.	NC_007793	613508	0	T	G	bias_e_value=464982	bias_p_value=0.159379	consensus_score=19.6	fisher_strand_p_value=0.12	frequency=1	ks_quality_p_value=0.309334	major_base=G	major_cov=44/0	major_frequency=8.800e-01	minor_base=T	minor_cov=5/1	new_cov=44/0	polymorphism_frequency=8.800e-01	polymorphism_score=6.1	prediction=consensus	ref_cov=5/1	total_cov=49/1
RA	1127	.	NC_007793	613522	0	A	T	bias_e_value=2764600	bias_p_value=0.947601	consensus_score=-0.2	fisher_strand_p_value=1	frequency=4.872e-01	ks_quality_p_value=0.694258	major_base=A	major_cov=19/1	major_frequency=5.128e-01	minor_base=T	minor_cov=19/0	new_cov=19/0	polymorphism_frequency=4.872e-01	polymorphism_score=43.8	prediction=polymorphism	ref_cov=19/1	total_cov=38/1
RA	1128	.	NC_007793	613526	0	T	G	bias_e_value=2375700	bias_p_value=0.814302	consensus_score=-3.0	fisher_strand_p_value=0.473684	frequency=5.263e-01	ks_quality_p_value=0.963265	major_base=G	major_cov=20/0	major_frequency=5.263e-01	minor_base=T	minor_cov=17/1	new_cov=20/0	polymorphism_frequency=5.263e-01	polymorphism_score=41.5	prediction=polymorphism	ref_cov=17/1	total_cov=38/1
RA	1129	.	NC_007793	613528	0	A	G	bias_e_value=2888600	bias_p_value=0.990104	consensus_score=2.9	fisher_strand_p_value=1	frequency=4.615e-01	ks_quality_p_value=0.862654	major_base=A	major_cov=20/1	major_frequency=5.385e-01	minor_base=G	minor_cov=18/0	new_cov=18/0	polymorphism_frequency=4.615e-01	polymorphism_score=29.2	prediction=polymorphism	ref_cov=20/1	total_cov=38/1
RA	1130	.	NC_007793	613531	0	T	C	bias_e_value=1407160	bias_p_value=0.482324	consensus_score=-5.5	fisher_strand_p_value=0.454545	frequency=5.455e-01	ks_quality_p_value=0.387915	major_base=C	major_cov=24/0	major_frequency=5.455e-01	minor_base=T	minor_cov=19/1	new_cov=24/0	polymorphism_frequency=5.455e-01	polymorphism_score=37.8	prediction=polymorphism	ref_cov=19/1	total_cov=43/1
RA	1131	.	NC_007793	613540	0	G	A	bias_e_value=2832330	bias_p_value=0.970819	consensus_score=0.5	fisher_strand_p_value=1	frequency=5.217e-01	ks_quality_p_value=0.768354	major_base=A	major_cov=12/0	major_frequency=5.217e-01	minor_base=T	minor_cov=11/0	new_cov=12/0	polymorphism_frequency=5.217e-01	polymorphism_score=23.6	prediction=polymorphism	ref_cov=5/1	total_cov=33/1
RA	1132	.	NC_007793	613543	0	C	T	bias_e_value=2779180	bias_p_value=0.952598	consensus_score=6.9	fisher_strand_p_value=1	frequency=3.103e-01	ks_quality_p_value=0.708342	major_base=C	major_cov=19/1	major_frequency=6.897e-01	minor_base=T	minor_cov=9/0	new_cov=9/0	polymorphism_frequency=3.103e-01	polymorphism_score=12.5	prediction=polymorphism	ref_cov=19/1	total_cov=28/1
RA	1133	.	NC_007793	613544	0	T	G	bias_e_value=2177900	bias_p_value=0.746502	consensus_score=3.6	fisher_strand_p_value=0.37931	frequency=6.207e-01	ks_quality_p_value=0.998608	major_base=G	major_cov=18/0	major_frequency=6.207e-01	minor_base=T	minor_cov=10/1	new_cov=18/0	polymorphism_frequency=6.207e-01	polymorphism_score=25.2	prediction=polymorphism	ref_cov=10/1	total_cov=28/1
RA	1134	.	NC_007793	613630	0	T	C	bias_e_value=2917470	bias_p_value=1	consensus_score=22.5	fisher_strand_p_value=1	frequency=7.609e-01	ks_quality_p_value=1	major_base=C	major_cov=35/0	major_frequency=7.609e-01	minor_base=T	minor_cov=11/0	new_cov=35/0	polymorphism_frequency=7.609e-01	polymorphism_score=13.3	prediction=polymorphism	ref_cov=11/0	total_cov=46/0
RA	1135	.	NC_007793	613633	0	T	C	bias_e_value=2879200	bias_p_value=0.986882	consensus_score=21.4	fisher_strand_p_value=1	frequency=2.857e-01	ks_quality_p_value=0.84246	major_base=T	major_cov=30/0	major_frequency=7.143e-01	minor_base=C	minor_cov=12/0	new_cov=12/0	polymorphism_frequency=2.857e-01	polymorphism_score=16.7	prediction=polymorphism	ref_cov=30/0	total_cov=43/0
RA	1136	.	NC_007793	613640	0	T	G	bias_e_value=2832590	bias_p_value=0.970906	consensus_score=20.6	fisher_strand_p_value=1	frequency=3.953e-01	ks_quality_p_value=0.768684	major_base=T	major_cov=26/0	major_frequency=6.047e-01	minor_base=G	minor_cov=17/0	new_cov=17/0	polymorphism_frequency=3.953e-01	polymorphism_score=37.9	prediction=polymorphism	ref_cov=26/0	total_cov=43/0
RA	1137	.	NC_007793	613642	0	A	G	bias_e_value=2911430	bias_p_value=0.99793	consensus_score=10.7	fisher_strand_p_value=1	frequency=3.953e-01	ks_quality_p_value=0.936347	major_base=A	major_cov=26/0	major_frequency=6.047e-01	minor_base=G	minor_cov=17/0	new_cov=17/0	polymorphism_frequency=3.953e-01	polymorphism_score=27.1	prediction=polymorphism	ref_cov=26/0	total_cov=43/0
RA	1138	.	NC_007793	613645	0	C	T	bias_e_value=2917100	bias_p_value=0.999874	consensus_score=27.8	fisher_strand_p_value=1	frequency=2.558e-01	ks_quality_p_value=0.984139	major_base=C	major_cov=32/0	major_frequency=7.442e-01	minor_base=T	minor_cov=11/0	new_cov=11/0	polymorphism_frequency=2.558e-01	polymorphism_score=15.3	prediction=polymorphism	ref_cov=32/0	total_cov=43/0
RA	1139	.	NC_007793	613651	0	C	T	bias_e_value=1367150	bias_p_value=0.468608	consensus_score=25.2	fisher_strand_p_value=1	frequency=2.766e-01	ks_quality_p_value=0.168522	major_base=C	major_cov=34/0	major_frequency=7.234e-01	minor_base=T	minor_cov=13/0	new_cov=13/0	polymorphism_frequency=2.766e-01	polymorphism_score=22.2	prediction=polymorphism	ref_cov=34/0	total_cov=47/0
RA	1140	.	NC_007793	613657	0	T	C	bias_e_value=39477.8	bias_p_value=0.0135315	consensus_score=-4.8	fisher_strand_p_value=1	frequency=4.286e-01	ks_quality_p_value=0.0018564	major_base=T	major_cov=28/0	major_frequency=5.714e-01	minor_base=C	minor_cov=21/0	new_cov=21/0	polymorphism_frequency=4.286e-01	polymorphism_score=38.1	prediction=polymorphism	ref_cov=28/0	total_cov=49/0
RA	1141	.	NC_007793	613658	0	T	G	bias_e_value=2917470	bias_p_value=1	consensus_score=21.4	fisher_strand_p_value=1	frequency=3.889e-01	ks_quality_p_value=1	major_base=T	major_cov=22/0	major_frequency=6.111e-01	minor_base=G	minor_cov=14/0	new_cov=14/0	polymorphism_frequency=3.889e-01	polymorphism_score=28.0	prediction=polymorphism	ref_cov=22/0	total_cov=36/0
RA	1142	.	NC_007793	613660	0	A	G	bias_e_value=2616570	bias_p_value=0.896864	consensus_score=9.0	fisher_strand_p_value=1	frequency=3.611e-01	ks_quality_p_value=0.581697	major_base=A	major_cov=23/0	major_frequency=6.389e-01	minor_base=G	minor_cov=13/0	new_cov=13/0	polymorphism_frequency=3.611e-01	polymorphism_score=19.0	prediction=polymorphism	ref_cov=23/0	total_cov=36/0
RA	1143	.	NC_007793	613663	0	T	C	bias_e_value=2862210	bias_p_value=0.981059	consensus_score=7.9	fisher_strand_p_value=1	frequency=3.889e-01	ks_quality_p_value=0.81179	major_base=T	major_cov=22/0	major_frequency=6.111e-01	minor_base=C	minor_cov=14/0	new_cov=14/0	polymorphism_frequency=3.889e-01	polymorphism_score=22.5	prediction=polymorphism	ref_cov=22/0	total_cov=36/0
RA	1144	.	NC_007793	613669	0	C	T	bias_e_value=2265550	bias_p_value=0.776545	consensus_score=-3.8	fisher_strand_p_value=1	frequency=5.000e-01	ks_quality_p_value=0.411112	major_base=T	major_cov=18/0	major_frequency=5.000e-01	minor_base=C	minor_cov=18/0	new_cov=18/0	polymorphism_frequency=5.000e-01	polymorphism_score=33.9	prediction=polymorphism	ref_cov=18/0	total_cov=36/0
RA	1145	.	NC_007793	613675	0	C	T	bias_e_value=2916360	bias_p_value=0.999621	consensus_score=9.5	fisher_strand_p_value=1	frequency=3.333e-01	ks_quality_p_value=0.972604	major_base=C	major_cov=24/0	major_frequency=6.667e-01	minor_base=T	minor_cov=12/0	new_cov=12/0	polymorphism_frequency=3.333e-01	polymorphism_score=20.0	prediction=polymorphism	ref_cov=24/0	total_cov=36/0
RA	1146	.	NC_007793	613676	0	T	G	bias_e_value=2917470	bias_p_value=1	consensus_score=22.4	fisher_strand_p_value=1	frequency=3.889e-01	ks_quality_p_value=1	major_base=T	major_cov=22/0	major_frequency=6.111e-01	minor_base=G	minor_cov=14/0	new_cov=14/0	polymorphism_frequency=3.889e-01	polymorphism_score=24.5	prediction=polymorphism	ref_cov=22/0	total_cov=36/0
RA	1147	.	NC_007793	613681	0	T	C	bias_e_value=2471640	bias_p_value=0.847186	consensus_score=4.5	fisher_strand_p_value=1	frequency=3.611e-01	ks_quality_p_value=0.500885	major_base=T	major_cov=23/0	major_frequency=6.389e-01	minor_base=C	minor_cov=13/0	new_cov=13/0	polymorphism_frequency=3.611e-01	polymorphism_score=20.3	prediction=polymorphism	ref_cov=23/0	total_cov=36/0
RA	1148	.	NC_007793	613687	0	C	T	bias_e_value=120150	bias_p_value=0.041183	consensus_score=-4.7	fisher_strand_p_value=1	frequency=4.167e-01	ks_quality_p_value=0.00688936	major_base=C	major_cov=21/0	major_frequency=5.833e-01	minor_base=T	minor_cov=15/0	new_cov=15/0	polymorphism_frequency=4.167e-01	polymorphism_score=27.5	prediction=polymorphism	ref_cov=21/0	total_cov=36/0
RA	1149	.	NC_007793	613693	0	C	T	bias_e_value=2817000	bias_p_value=0.965563	consensus_score=0.3	fisher_strand_p_value=1	frequency=3.889e-01	ks_quality_p_value=0.749312	major_base=C	major_cov=22/0	major_frequency=6.111e-01	minor_base=T	minor_cov=14/0	new_cov=14/0	polymorphism_frequency=3.889e-01	polymorphism_score=26.8	prediction=polymorphism	ref_cov=22/0	total_cov=36/0
RA	1150	.	NC_007793	613694	0	T	G	bias_e_value=2917470	bias_p_value=1	consensus_score=15.8	fisher_strand_p_value=1	frequency=4.722e-01	ks_quality_p_value=1	major_base=T	major_cov=19/0	major_frequency=5.278e-01	minor_base=G	minor_cov=17/0	new_cov=17/0	polymorphism_frequency=4.722e-01	polymorphism_score=34.6	prediction=polymorphism	ref_cov=19/0	total_cov=36/0
RA	1151	.	NC_007793	613699	0	T	C	bias_e_value=2235980	bias_p_value=0.76641	consensus_score=-4.3	fisher_strand_p_value=1	frequency=4.722e-01	ks_quality_p_value=0.399884	major_base=T	major_cov=19/0	major_frequency=5.278e-01	minor_base=C	minor_cov=17/0	new_cov=17/0	polymorphism_frequency=4.722e-01	polymorphism_score=27.6	prediction=polymorphism	ref_cov=19/0	total_cov=36/0
RA	1152	.	NC_007793	613702	0	C	T	bias_e_value=2900000	bias_p_value=0.994012	consensus_score=5.6	fisher_strand_p_value=1	frequency=3.125e-01	ks_quality_p_value=0.892582	major_base=C	major_cov=22/0	major_frequency=6.875e-01	minor_base=T	minor_cov=10/0	new_cov=10/0	polymorphism_frequency=3.125e-01	polymorphism_score=16.7	prediction=polymorphism	ref_cov=22/0	total_cov=36/0
RA	1153	.	NC_007793	613708	0	A	T	bias_e_value=2890390	bias_p_value=0.990718	consensus_score=32.8	fisher_strand_p_value=1	frequency=2.222e-01	ks_quality_p_value=0.866878	major_base=A	major_cov=28/0	major_frequency=7.778e-01	minor_base=T	minor_cov=8/0	new_cov=8/0	polymorphism_frequency=2.222e-01	polymorphism_score=12.5	prediction=polymorphism	ref_cov=28/0	total_cov=36/0
RA	1154	.	NC_007793	613711	0	C	.	bias_e_value=2858720	bias_p_value=0.979863	consensus_score=33.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.806148	major_base=.	major_cov=27/0	major_frequency=8.182e-01	minor_base=T	minor_cov=6/0	new_cov=27/0	polymorphism_frequency=8.182e-01	polymorphism_score=26.1	prediction=consensus	ref_cov=3/0	total_cov=36/0
RA	1155	.	NC_007793	613717	0	T	C	bias_e_value=2202180	bias_p_value=0.754825	consensus_score=10.4	fisher_strand_p_value=1	frequency=5.556e-01	ks_quality_p_value=0.387458	major_base=C	major_cov=15/0	major_frequency=5.556e-01	minor_base=T	minor_cov=12/0	new_cov=15/0	polymorphism_frequency=5.556e-01	polymorphism_score=21.6	prediction=polymorphism	ref_cov=12/0	total_cov=27/0
RA	1156	.	NC_007793	613723	0	T	C	bias_e_value=1362750	bias_p_value=0.467101	consensus_score=15.9	fisher_strand_p_value=1	frequency=5.000e-01	ks_quality_p_value=0.167677	major_base=T	major_cov=13/1	major_frequency=5.000e-01	minor_base=C	minor_cov=14/0	new_cov=14/0	polymorphism_frequency=5.000e-01	polymorphism_score=23.0	prediction=polymorphism	ref_cov=13/1	total_cov=27/1
RA	1157	.	NC_007793	613741	0	C	T	bias_e_value=1490100	bias_p_value=0.510752	consensus_score=11.5	fisher_strand_p_value=0.444444	frequency=5.556e-01	ks_quality_p_value=0.434598	major_base=T	major_cov=15/0	major_frequency=5.556e-01	minor_base=C	minor_cov=11/1	new_cov=15/0	polymorphism_frequency=5.556e-01	polymorphism_score=18.2	prediction=polymorphism	ref_cov=11/1	total_cov=26/1
RA	1158	.	NC_007793	616684	0	T	A	bias_e_value=2.95412	bias_p_value=1.01256e-06	consensus_score=35.5	fisher_strand_p_value=0.0539084	frequency=7.642e-01	ks_quality_p_value=1.06268e-06	major_base=A	major_cov=81/0	major_frequency=7.642e-01	minor_base=T	minor_cov=23/2	new_cov=81/0	polymorphism_frequency=7.642e-01	polymorphism_score=53.6	prediction=polymorphism	ref_cov=23/2	total_cov=104/2
RA	1159	.	NC_007793	616686	0	G	A	bias_e_value=300.723	bias_p_value=0.000103077	consensus_score=44.6	fisher_strand_p_value=0.0539084	frequency=7.642e-01	ks_quality_p_value=0.000150279	major_base=A	major_cov=81/0	major_frequency=7.642e-01	minor_base=G	minor_cov=23/2	new_cov=81/0	polymorphism_frequency=7.642e-01	polymorphism_score=42.6	prediction=polymorphism	ref_cov=23/2	total_cov=104/2
RA	1160	.	NC_007793	616693	0	T	C	bias_e_value=121.904	bias_p_value=4.17843e-05	consensus_score=40.2	fisher_strand_p_value=0.0573091	frequency=7.570e-01	ks_quality_p_value=5.32176e-05	major_base=C	major_cov=81/0	major_frequency=7.570e-01	minor_base=T	minor_cov=24/2	new_cov=81/0	polymorphism_frequency=7.570e-01	polymorphism_score=46.6	prediction=polymorphism	ref_cov=24/2	total_cov=105/2
RA	1161	.	NC_007793	616697	0	A	T	bias_e_value=603238	bias_p_value=0.206768	consensus_score=36.3	fisher_strand_p_value=0.0573091	frequency=7.570e-01	ks_quality_p_value=0.91344	major_base=T	major_cov=81/0	major_frequency=7.570e-01	minor_base=A	minor_cov=24/2	new_cov=81/0	polymorphism_frequency=7.570e-01	polymorphism_score=53.7	prediction=polymorphism	ref_cov=24/2	total_cov=105/2
RA	1162	.	NC_007793	616698	0	T	G	bias_e_value=571901	bias_p_value=0.196026	consensus_score=29.9	fisher_strand_p_value=0.0573091	frequency=7.570e-01	ks_quality_p_value=0.85065	major_base=G	major_cov=81/0	major_frequency=7.570e-01	minor_base=T	minor_cov=24/2	new_cov=81/0	polymorphism_frequency=7.570e-01	polymorphism_score=60.2	prediction=polymorphism	ref_cov=24/2	total_cov=105/2
RA	1163	.	NC_007793	616702	0	A	T	bias_e_value=537439	bias_p_value=0.184214	consensus_score=31.9	fisher_strand_p_value=0.0607477	frequency=7.500e-01	ks_quality_p_value=0.738991	major_base=T	major_cov=81/0	major_frequency=7.500e-01	minor_base=A	minor_cov=25/2	new_cov=81/0	polymorphism_frequency=7.500e-01	polymorphism_score=57.5	prediction=polymorphism	ref_cov=25/2	total_cov=106/2
RA	1164	.	NC_007793	616726	0	A	G	bias_e_value=0.00602269	bias_p_value=2.06435e-09	consensus_score=113.7	fisher_strand_p_value=0.0198102	frequency=1	ks_quality_p_value=4.30887e-09	major_base=G	major_cov=119/0	major_frequency=8.561e-01	minor_base=A	minor_cov=18/2	new_cov=119/0	polymorphism_frequency=8.561e-01	polymorphism_score=26.3	prediction=consensus	ref_cov=18/2	total_cov=137/2
RA	1165	.	NC_007793	616727	1	.	C	bias_e_value=563886	bias_p_value=0.193279	consensus_score=160.1	fisher_strand_p_value=0.131387	frequency=1	ks_quality_p_value=0.364143	major_base=C	major_cov=119/0	major_frequency=8.686e-01	minor_base=.	minor_cov=17/1	new_cov=119/0	polymorphism_frequency=8.686e-01	polymorphism_score=54.9	prediction=consensus	ref_cov=17/1	total_cov=136/1
RA	1166	.	NC_007793	616727	2	.	T	bias_e_value=226533	bias_p_value=0.0776471	consensus_score=169.9	fisher_strand_p_value=0.131387	frequency=1	ks_quality_p_value=0.113536	major_base=T	major_cov=119/0	major_frequency=8.686e-01	minor_base=.	minor_cov=17/1	new_cov=119/0	polymorphism_frequency=8.686e-01	polymorphism_score=44.6	prediction=consensus	ref_cov=17/1	total_cov=136/1
RA	1167	.	NC_007793	616727	3	.	T	bias_e_value=686022	bias_p_value=0.235143	consensus_score=170.9	fisher_strand_p_value=0.131387	frequency=1	ks_quality_p_value=0.473928	major_base=T	major_cov=119/0	major_frequency=8.686e-01	minor_base=.	minor_cov=17/1	new_cov=119/0	polymorphism_frequency=8.686e-01	polymorphism_score=44.6	prediction=consensus	ref_cov=17/1	total_cov=136/1
RA	1168	.	NC_007793	616729	0	A	T	bias_e_value=785853	bias_p_value=0.269361	consensus_score=140.3	fisher_strand_p_value=0.0775194	frequency=1	ks_quality_p_value=0.967954	major_base=T	major_cov=119/0	major_frequency=9.225e-01	minor_base=A	minor_cov=9/1	new_cov=119/0	polymorphism_frequency=9.225e-01	polymorphism_score=12.8	prediction=consensus	ref_cov=9/1	total_cov=128/1
RA	1169	.	NC_007793	616735	0	T	C	bias_e_value=801495	bias_p_value=0.274723	consensus_score=142.1	fisher_strand_p_value=0.0775194	frequency=1	ks_quality_p_value=0.994802	major_base=C	major_cov=119/0	major_frequency=9.225e-01	minor_base=T	minor_cov=9/1	new_cov=119/0	polymorphism_frequency=9.225e-01	polymorphism_score=8.5	prediction=consensus	ref_cov=9/1	total_cov=128/1
RA	1170	.	NC_007793	616737	0	A	G	bias_e_value=2916220	bias_p_value=0.999572	consensus_score=148.2	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.970889	major_base=G	major_cov=119/0	major_frequency=9.297e-01	minor_base=A	minor_cov=9/0	new_cov=119/0	polymorphism_frequency=9.297e-01	polymorphism_score=3.5	prediction=consensus	ref_cov=9/0	total_cov=128/0
RA	1171	.	NC_007793	616738	0	T	C	bias_e_value=2916220	bias_p_value=0.999572	consensus_score=143.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.970889	major_base=C	major_cov=119/0	major_frequency=9.297e-01	minor_base=T	minor_cov=9/0	new_cov=119/0	polymorphism_frequency=9.297e-01	polymorphism_score=7.0	prediction=consensus	ref_cov=9/0	total_cov=128/0
RA	1172	.	NC_007793	616745	0	A	G	bias_e_value=852397	bias_p_value=0.29217	consensus_score=146.2	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.0840432	major_base=G	major_cov=119/0	major_frequency=9.297e-01	minor_base=A	minor_cov=9/0	new_cov=119/0	polymorphism_frequency=9.297e-01	polymorphism_score=6.0	prediction=consensus	ref_cov=9/0	total_cov=128/0
RA	1173	.	NC_007793	616757	0	G	T	bias_e_value=2890410	bias_p_value=0.990725	consensus_score=138.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.866931	major_base=T	major_cov=117/0	major_frequency=9.213e-01	minor_base=G	minor_cov=10/0	new_cov=117/0	polymorphism_frequency=9.213e-01	polymorphism_score=11.9	prediction=consensus	ref_cov=10/0	total_cov=128/0
RA	1174	.	NC_007793	616759	0	A	C	bias_e_value=2904530	bias_p_value=0.995563	consensus_score=142.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.907292	major_base=C	major_cov=118/0	major_frequency=9.291e-01	minor_base=A	minor_cov=9/0	new_cov=118/0	polymorphism_frequency=9.291e-01	polymorphism_score=12.1	prediction=consensus	ref_cov=9/0	total_cov=128/0
RA	1175	.	NC_007793	616763	0	A	T	bias_e_value=777763	bias_p_value=0.266588	consensus_score=140.4	fisher_strand_p_value=0.0775194	frequency=1	ks_quality_p_value=0.95418	major_base=T	major_cov=119/0	major_frequency=9.225e-01	minor_base=A	minor_cov=9/1	new_cov=119/0	polymorphism_frequency=9.225e-01	polymorphism_score=12.7	prediction=consensus	ref_cov=9/1	total_cov=128/1
RA	1176	.	NC_007793	616765	0	A	T	bias_e_value=687049	bias_p_value=0.235495	consensus_score=146.9	fisher_strand_p_value=0.0629921	frequency=1	ks_quality_p_value=0.990517	major_base=T	major_cov=119/0	major_frequency=9.370e-01	minor_base=A	minor_cov=7/1	new_cov=119/0	polymorphism_frequency=9.370e-01	polymorphism_score=8.3	prediction=consensus	ref_cov=7/1	total_cov=127/1
RA	1177	.	NC_007793	616778	0	A	T	bias_e_value=1476470	bias_p_value=0.506079	consensus_score=19.9	fisher_strand_p_value=0.191489	frequency=1	ks_quality_p_value=0.993922	major_base=T	major_cov=38/0	major_frequency=8.085e-01	minor_base=A	minor_cov=8/1	new_cov=38/0	polymorphism_frequency=8.085e-01	polymorphism_score=13.2	prediction=consensus	ref_cov=8/1	total_cov=46/1
RA	1178	.	NC_007793	616780	0	G	C	bias_e_value=1102080	bias_p_value=0.377751	consensus_score=24.7	fisher_strand_p_value=0.136364	frequency=1	ks_quality_p_value=0.891515	major_base=C	major_cov=38/0	major_frequency=8.636e-01	minor_base=G	minor_cov=5/1	new_cov=38/0	polymorphism_frequency=8.636e-01	polymorphism_score=9.2	prediction=consensus	ref_cov=5/1	total_cov=43/1
RA	1179	.	NC_007793	616783	0	G	A	bias_e_value=1054620	bias_p_value=0.361483	consensus_score=28.7	fisher_strand_p_value=0.136364	frequency=1	ks_quality_p_value=0.83575	major_base=A	major_cov=38/0	major_frequency=8.636e-01	minor_base=G	minor_cov=5/1	new_cov=38/0	polymorphism_frequency=8.636e-01	polymorphism_score=4.3	prediction=consensus	ref_cov=5/1	total_cov=43/1
RA	1180	.	NC_007793	616786	0	T	C	bias_e_value=1184820	bias_p_value=0.406112	consensus_score=28.1	fisher_strand_p_value=0.136364	frequency=1	ks_quality_p_value=0.992849	major_base=C	major_cov=38/0	major_frequency=8.636e-01	minor_base=T	minor_cov=5/1	new_cov=38/0	polymorphism_frequency=8.636e-01	polymorphism_score=4.8	prediction=consensus	ref_cov=5/1	total_cov=43/1
RA	1181	.	NC_007793	616787	0	T	A	bias_e_value=1140120	bias_p_value=0.390791	consensus_score=25.6	fisher_strand_p_value=0.136364	frequency=1	ks_quality_p_value=0.937449	major_base=A	major_cov=38/0	major_frequency=8.636e-01	minor_base=T	minor_cov=5/1	new_cov=38/0	polymorphism_frequency=8.636e-01	polymorphism_score=7.6	prediction=consensus	ref_cov=5/1	total_cov=43/1
RA	1182	.	NC_007793	616788	0	C	A	bias_e_value=1190500	bias_p_value=0.408059	consensus_score=26.6	fisher_strand_p_value=0.136364	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=38/0	major_frequency=8.636e-01	minor_base=C	minor_cov=5/1	new_cov=38/0	polymorphism_frequency=8.636e-01	polymorphism_score=7.3	prediction=consensus	ref_cov=5/1	total_cov=43/1
RA	1183	.	NC_007793	616789	0	A	T	bias_e_value=1190500	bias_p_value=0.408059	consensus_score=28.1	fisher_strand_p_value=0.136364	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=38/0	major_frequency=8.636e-01	minor_base=A	minor_cov=5/1	new_cov=38/0	polymorphism_frequency=8.636e-01	polymorphism_score=5.5	prediction=consensus	ref_cov=5/1	total_cov=43/1
RA	1184	.	NC_007793	616790	0	A	G	bias_e_value=1190500	bias_p_value=0.408059	consensus_score=28.4	fisher_strand_p_value=0.136364	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=38/0	major_frequency=8.636e-01	minor_base=A	minor_cov=5/1	new_cov=38/0	polymorphism_frequency=8.636e-01	polymorphism_score=4.9	prediction=consensus	ref_cov=5/1	total_cov=43/1
RA	1185	.	NC_007793	616791	0	C	A	bias_e_value=1115850	bias_p_value=0.382472	consensus_score=26.6	fisher_strand_p_value=0.136364	frequency=1	ks_quality_p_value=0.908018	major_base=A	major_cov=38/0	major_frequency=8.636e-01	minor_base=C	minor_cov=5/1	new_cov=38/0	polymorphism_frequency=8.636e-01	polymorphism_score=7.3	prediction=consensus	ref_cov=5/1	total_cov=43/1
RA	1186	.	NC_007793	617467	0	C	T	bias_e_value=921107	bias_p_value=0.315721	consensus_score=0.8	fisher_strand_p_value=1	frequency=6.364e-01	ks_quality_p_value=0.0937725	major_base=T	major_cov=13/1	major_frequency=6.364e-01	minor_base=C	minor_cov=7/1	new_cov=13/1	polymorphism_frequency=6.364e-01	polymorphism_score=10.6	prediction=polymorphism	ref_cov=7/1	total_cov=20/2
RA	1187	.	NC_007793	617472	0	A	G	bias_e_value=1733860	bias_p_value=0.594301	consensus_score=3.1	fisher_strand_p_value=1	frequency=6.190e-01	ks_quality_p_value=0.248365	major_base=G	major_cov=12/1	major_frequency=6.190e-01	minor_base=A	minor_cov=8/0	new_cov=12/1	polymorphism_frequency=6.190e-01	polymorphism_score=10.6	prediction=polymorphism	ref_cov=8/0	total_cov=20/1
RA	1188	.	NC_007793	617489	0	T	A	bias_e_value=2117860	bias_p_value=0.725924	consensus_score=6.5	fisher_strand_p_value=1	frequency=6.471e-01	ks_quality_p_value=0.358173	major_base=A	major_cov=10/1	major_frequency=6.471e-01	minor_base=T	minor_cov=6/0	new_cov=10/1	polymorphism_frequency=6.471e-01	polymorphism_score=10.6	prediction=polymorphism	ref_cov=6/0	total_cov=16/1
RA	1189	.	NC_007793	617490	0	T	A	bias_e_value=2519470	bias_p_value=0.863579	consensus_score=6.3	fisher_strand_p_value=1	frequency=6.471e-01	ks_quality_p_value=0.525453	major_base=A	major_cov=10/1	major_frequency=6.471e-01	minor_base=T	minor_cov=6/0	new_cov=10/1	polymorphism_frequency=6.471e-01	polymorphism_score=10.4	prediction=polymorphism	ref_cov=6/0	total_cov=16/1
RA	1190	.	NC_007793	617503	0	C	T	bias_e_value=2791470	bias_p_value=0.956814	consensus_score=11.6	fisher_strand_p_value=1	frequency=5.500e-01	ks_quality_p_value=0.720887	major_base=T	major_cov=10/1	major_frequency=5.500e-01	minor_base=C	minor_cov=9/0	new_cov=10/1	polymorphism_frequency=5.500e-01	polymorphism_score=14.1	prediction=polymorphism	ref_cov=9/0	total_cov=19/1
RA	1191	.	NC_007793	617504	0	G	A	bias_e_value=2917470	bias_p_value=1	consensus_score=10.6	fisher_strand_p_value=1	frequency=5.500e-01	ks_quality_p_value=1	major_base=A	major_cov=10/1	major_frequency=5.500e-01	minor_base=G	minor_cov=9/0	new_cov=10/1	polymorphism_frequency=5.500e-01	polymorphism_score=13.0	prediction=polymorphism	ref_cov=9/0	total_cov=19/1
RA	1192	.	NC_007793	617506	0	A	C	bias_e_value=2908220	bias_p_value=0.99683	consensus_score=16.4	fisher_strand_p_value=1	frequency=5.500e-01	ks_quality_p_value=0.921439	major_base=C	major_cov=10/1	major_frequency=5.500e-01	minor_base=A	minor_cov=9/0	new_cov=10/1	polymorphism_frequency=5.500e-01	polymorphism_score=19.0	prediction=polymorphism	ref_cov=9/0	total_cov=19/1
RA	1193	.	NC_007793	617510	0	A	T	bias_e_value=2917470	bias_p_value=1	consensus_score=9.0	fisher_strand_p_value=1	frequency=6.111e-01	ks_quality_p_value=1	major_base=T	major_cov=10/1	major_frequency=6.111e-01	minor_base=A	minor_cov=7/0	new_cov=10/1	polymorphism_frequency=6.111e-01	polymorphism_score=11.6	prediction=polymorphism	ref_cov=7/0	total_cov=17/1
RA	1194	.	NC_007793	617512	0	T	A	bias_e_value=2910510	bias_p_value=0.997615	consensus_score=8.3	fisher_strand_p_value=1	frequency=6.111e-01	ks_quality_p_value=0.931735	major_base=A	major_cov=10/1	major_frequency=6.111e-01	minor_base=T	minor_cov=7/0	new_cov=10/1	polymorphism_frequency=6.111e-01	polymorphism_score=10.9	prediction=polymorphism	ref_cov=7/0	total_cov=17/1
RA	1195	.	NC_007793	617513	0	G	A	bias_e_value=2910510	bias_p_value=0.997615	consensus_score=7.6	fisher_strand_p_value=1	frequency=6.111e-01	ks_quality_p_value=0.931735	major_base=A	major_cov=10/1	major_frequency=6.111e-01	minor_base=G	minor_cov=7/0	new_cov=10/1	polymorphism_frequency=6.111e-01	polymorphism_score=10.2	prediction=polymorphism	ref_cov=7/0	total_cov=17/1
RA	1196	.	NC_007793	617527	0	A	T	bias_e_value=2917470	bias_p_value=1	consensus_score=18.1	fisher_strand_p_value=1	frequency=5.238e-01	ks_quality_p_value=1	major_base=T	major_cov=10/1	major_frequency=5.238e-01	minor_base=A	minor_cov=10/0	new_cov=10/1	polymorphism_frequency=5.238e-01	polymorphism_score=19.7	prediction=polymorphism	ref_cov=10/0	total_cov=20/1
RA	1197	.	NC_007793	617542	0	A	G	bias_e_value=2917470	bias_p_value=1	consensus_score=12.3	fisher_strand_p_value=1	frequency=5.500e-01	ks_quality_p_value=1	major_base=G	major_cov=10/1	major_frequency=5.500e-01	minor_base=A	minor_cov=9/0	new_cov=10/1	polymorphism_frequency=5.500e-01	polymorphism_score=14.2	prediction=polymorphism	ref_cov=9/0	total_cov=19/1
RA	1198	.	NC_007793	617545	0	C	T	bias_e_value=2917470	bias_p_value=1	consensus_score=10.7	fisher_strand_p_value=1	frequency=5.500e-01	ks_quality_p_value=1	major_base=T	major_cov=10/1	major_frequency=5.500e-01	minor_base=C	minor_cov=9/0	new_cov=10/1	polymorphism_frequency=5.500e-01	polymorphism_score=12.7	prediction=polymorphism	ref_cov=9/0	total_cov=19/1
RA	1199	.	NC_007793	617546	0	T	C	bias_e_value=2865310	bias_p_value=0.982123	consensus_score=12.3	fisher_strand_p_value=1	frequency=5.789e-01	ks_quality_p_value=0.81697	major_base=C	major_cov=10/1	major_frequency=5.789e-01	minor_base=T	minor_cov=8/0	new_cov=10/1	polymorphism_frequency=5.789e-01	polymorphism_score=14.2	prediction=polymorphism	ref_cov=8/0	total_cov=19/1
RA	1200	.	NC_007793	617707	0	A	C	consensus_score=48.2	frequency=1	major_base=C	major_cov=21/3	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=21/3	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=21/3
RA	1201	.	NC_007793	617744	0	T	G	bias_e_value=1737500	bias_p_value=0.595549	consensus_score=32.3	fisher_strand_p_value=0.261538	frequency=3.846e-01	ks_quality_p_value=0.95306	major_base=T	major_cov=13/3	major_frequency=6.154e-01	minor_base=G	minor_cov=10/0	new_cov=10/0	polymorphism_frequency=3.846e-01	polymorphism_score=20.9	prediction=polymorphism	ref_cov=13/3	total_cov=23/3
RA	1202	.	NC_007793	617770	0	A	C	bias_e_value=2445270	bias_p_value=0.838149	consensus_score=42.7	fisher_strand_p_value=0.51954	frequency=3.667e-01	ks_quality_p_value=0.939394	major_base=A	major_cov=17/2	major_frequency=6.333e-01	minor_base=C	minor_cov=11/0	new_cov=11/0	polymorphism_frequency=3.667e-01	polymorphism_score=24.5	prediction=polymorphism	ref_cov=17/2	total_cov=28/2
RA	1203	.	NC_007793	617780	0	T	G	bias_e_value=2501720	bias_p_value=0.857496	consensus_score=49.9	fisher_strand_p_value=0.516129	frequency=3.750e-01	ks_quality_p_value=1	major_base=T	major_cov=18/2	major_frequency=6.250e-01	minor_base=G	minor_cov=12/0	new_cov=12/0	polymorphism_frequency=3.750e-01	polymorphism_score=21.5	prediction=polymorphism	ref_cov=18/2	total_cov=30/2
RA	1204	.	NC_007793	617788	0	T	C	bias_e_value=2908180	bias_p_value=0.996817	consensus_score=32.3	fisher_strand_p_value=1	frequency=4.062e-01	ks_quality_p_value=0.921287	major_base=T	major_cov=18/1	major_frequency=5.938e-01	minor_base=C	minor_cov=13/0	new_cov=13/0	polymorphism_frequency=4.062e-01	polymorphism_score=19.5	prediction=polymorphism	ref_cov=18/1	total_cov=32/1
RA	1205	.	NC_007793	617797	0	C	T	bias_e_value=2917470	bias_p_value=1	consensus_score=24.5	fisher_strand_p_value=1	frequency=4.231e-01	ks_quality_p_value=1	major_base=C	major_cov=15/0	major_frequency=5.769e-01	minor_base=T	minor_cov=11/0	new_cov=11/0	polymorphism_frequency=4.231e-01	polymorphism_score=15.5	prediction=polymorphism	ref_cov=15/0	total_cov=28/0
RA	1206	.	NC_007793	617798	0	T	G	bias_e_value=2917470	bias_p_value=1	consensus_score=42.9	fisher_strand_p_value=1	frequency=3.214e-01	ks_quality_p_value=1	major_base=T	major_cov=19/0	major_frequency=6.786e-01	minor_base=G	minor_cov=9/0	new_cov=9/0	polymorphism_frequency=3.214e-01	polymorphism_score=14.8	prediction=polymorphism	ref_cov=19/0	total_cov=28/0
RA	1207	.	NC_007793	617864	0	T	G	bias_e_value=2917470	bias_p_value=1	consensus_score=40.7	fisher_strand_p_value=1	frequency=2.903e-01	ks_quality_p_value=1	major_base=T	major_cov=20/2	major_frequency=7.097e-01	minor_base=G	minor_cov=9/0	new_cov=9/0	polymorphism_frequency=2.903e-01	polymorphism_score=14.0	prediction=polymorphism	ref_cov=20/2	total_cov=29/2
RA	1208	.	NC_007793	617872	0	T	C	bias_e_value=1339410	bias_p_value=0.459099	consensus_score=19.1	fisher_strand_p_value=0.504505	frequency=4.054e-01	ks_quality_p_value=0.323544	major_base=T	major_cov=20/2	major_frequency=5.946e-01	minor_base=C	minor_cov=15/0	new_cov=15/0	polymorphism_frequency=4.054e-01	polymorphism_score=25.7	prediction=polymorphism	ref_cov=20/2	total_cov=35/2
RA	1209	.	NC_007793	617882	0	T	G	bias_e_value=46.6726	bias_p_value=1.59976e-05	consensus_score=78.6	fisher_strand_p_value=0.177609	frequency=1	ks_quality_p_value=6.11357e-06	major_base=G	major_cov=78/2	major_frequency=8.000e-01	minor_base=T	minor_cov=18/2	new_cov=78/2	polymorphism_frequency=8.000e-01	polymorphism_score=45.9	prediction=consensus	ref_cov=18/2	total_cov=96/4
RA	1210	.	NC_007793	617893	0	C	T	bias_e_value=1863710	bias_p_value=0.638809	consensus_score=53.3	fisher_strand_p_value=0.319848	frequency=3.093e-01	ks_quality_p_value=0.881272	major_base=C	major_cov=62/5	major_frequency=6.907e-01	minor_base=T	minor_cov=30/0	new_cov=30/0	polymorphism_frequency=3.093e-01	polymorphism_score=57.4	prediction=polymorphism	ref_cov=62/5	total_cov=92/5
RA	1211	.	NC_007793	617896	0	A	T	bias_e_value=2472310	bias_p_value=0.847414	consensus_score=15.5	fisher_strand_p_value=1	frequency=5.842e-01	ks_quality_p_value=0.501215	major_base=T	major_cov=56/3	major_frequency=5.842e-01	minor_base=A	minor_cov=40/2	new_cov=56/3	polymorphism_frequency=5.842e-01	polymorphism_score=102.8	prediction=polymorphism	ref_cov=40/2	total_cov=97/5
RA	1212	.	NC_007793	617900	0	T	G	bias_e_value=824295	bias_p_value=0.282538	consensus_score=43.7	fisher_strand_p_value=1	frequency=6.495e-01	ks_quality_p_value=0.0801899	major_base=G	major_cov=60/3	major_frequency=6.495e-01	minor_base=T	minor_cov=33/1	new_cov=60/3	polymorphism_frequency=6.495e-01	polymorphism_score=85.0	prediction=polymorphism	ref_cov=33/1	total_cov=93/5
RA	1213	.	NC_007793	617902	0	A	G	bias_e_value=5.10454	bias_p_value=1.74965e-06	consensus_score=40.9	fisher_strand_p_value=1	frequency=6.531e-01	ks_quality_p_value=1.02349e-07	major_base=G	major_cov=61/3	major_frequency=6.531e-01	minor_base=A	minor_cov=32/2	new_cov=61/3	polymorphism_frequency=6.531e-01	polymorphism_score=61.5	prediction=polymorphism	ref_cov=32/2	total_cov=93/5
RA	1214	.	NC_007793	617905	0	C	T	bias_e_value=97.9961	bias_p_value=3.35894e-05	consensus_score=59.3	fisher_strand_p_value=0.31727	frequency=2.857e-01	ks_quality_p_value=7.59702e-06	major_base=C	major_cov=65/5	major_frequency=7.143e-01	minor_base=T	minor_cov=28/0	new_cov=28/0	polymorphism_frequency=2.857e-01	polymorphism_score=51.4	prediction=polymorphism	ref_cov=65/5	total_cov=93/5
RA	1215	.	NC_007793	617911	0	C	T	bias_e_value=385.843	bias_p_value=0.000132253	consensus_score=62.0	fisher_strand_p_value=0.318289	frequency=2.755e-01	ks_quality_p_value=3.3367e-05	major_base=C	major_cov=66/5	major_frequency=7.245e-01	minor_base=T	minor_cov=27/0	new_cov=27/0	polymorphism_frequency=2.755e-01	polymorphism_score=50.9	prediction=polymorphism	ref_cov=66/5	total_cov=93/5
RA	1216	.	NC_007793	617929	0	C	T	bias_e_value=2410010	bias_p_value=0.826062	consensus_score=-5.5	fisher_strand_p_value=0.618506	frequency=5.000e-01	ks_quality_p_value=0.762474	major_base=T	major_cov=56/3	major_frequency=5.000e-01	minor_base=C	minor_cov=58/1	new_cov=56/3	polymorphism_frequency=5.000e-01	polymorphism_score=110.5	prediction=polymorphism	ref_cov=58/1	total_cov=119/5
RA	1217	.	NC_007793	617936	0	T	G	bias_e_value=241610	bias_p_value=0.082815	consensus_score=555.2	fisher_strand_p_value=0.022268	frequency=1	ks_quality_p_value=0.725612	major_base=G	major_cov=347/11	major_frequency=9.808e-01	minor_base=T	minor_cov=5/2	new_cov=347/11	polymorphism_frequency=9.808e-01	polymorphism_score=3.1	prediction=consensus	ref_cov=5/2	total_cov=353/13
RA	1218	.	NC_007793	617944	0	T	C	bias_e_value=416627	bias_p_value=0.142804	consensus_score=501.1	fisher_strand_p_value=0.0358676	frequency=1	ks_quality_p_value=0.897518	major_base=C	major_cov=321/10	major_frequency=9.735e-01	minor_base=T	minor_cov=7/2	new_cov=321/10	polymorphism_frequency=9.735e-01	polymorphism_score=2.6	prediction=consensus	ref_cov=7/2	total_cov=328/12
RA	1219	.	NC_007793	617954	0	T	G	bias_e_value=87478.7	bias_p_value=0.0299844	consensus_score=402.4	fisher_strand_p_value=0.162461	frequency=1	ks_quality_p_value=0.0290352	major_base=G	major_cov=271/8	major_frequency=8.692e-01	minor_base=T	minor_cov=39/3	new_cov=271/8	polymorphism_frequency=8.692e-01	polymorphism_score=86.9	prediction=consensus	ref_cov=39/3	total_cov=310/11
RA	1220	.	NC_007793	617968	0	A	T	bias_e_value=1801320	bias_p_value=0.617425	consensus_score=415.5	fisher_strand_p_value=0.352377	frequency=1	ks_quality_p_value=0.753103	major_base=T	major_cov=264/8	major_frequency=8.774e-01	minor_base=A	minor_cov=36/2	new_cov=264/8	polymorphism_frequency=8.774e-01	polymorphism_score=64.0	prediction=consensus	ref_cov=36/2	total_cov=300/10
RA	1221	.	NC_007793	617972	0	T	G	bias_e_value=2844250	bias_p_value=0.974904	consensus_score=107.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.784497	major_base=G	major_cov=72/0	major_frequency=9.351e-01	minor_base=T	minor_cov=5/0	new_cov=72/0	polymorphism_frequency=9.351e-01	polymorphism_score=3.5	prediction=consensus	ref_cov=5/0	total_cov=77/0
RA	1222	.	NC_007793	617974	0	A	G	bias_e_value=2167640	bias_p_value=0.742985	consensus_score=102.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.375178	major_base=G	major_cov=71/0	major_frequency=9.342e-01	minor_base=A	minor_cov=5/0	new_cov=71/0	polymorphism_frequency=9.342e-01	polymorphism_score=2.1	prediction=consensus	ref_cov=5/0	total_cov=77/0
RA	1223	.	NC_007793	617989	0	C	T	bias_e_value=2903380	bias_p_value=0.99517	consensus_score=97.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.903342	major_base=T	major_cov=67/0	major_frequency=9.054e-01	minor_base=C	minor_cov=7/0	new_cov=67/0	polymorphism_frequency=9.054e-01	polymorphism_score=2.5	prediction=consensus	ref_cov=7/0	total_cov=74/0
RA	1224	.	NC_007793	618001	0	C	T	bias_e_value=2846590	bias_p_value=0.975706	consensus_score=98.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.787829	major_base=T	major_cov=68/0	major_frequency=9.189e-01	minor_base=C	minor_cov=6/0	new_cov=68/0	polymorphism_frequency=9.189e-01	polymorphism_score=0.6	prediction=consensus	ref_cov=6/0	total_cov=74/0
RA	1225	.	NC_007793	618008	0	T	G	bias_e_value=1277330	bias_p_value=0.437822	consensus_score=89.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.151721	major_base=G	major_cov=66/0	major_frequency=9.429e-01	minor_base=T	minor_cov=4/0	new_cov=66/0	polymorphism_frequency=9.429e-01	polymorphism_score=-0.2	prediction=consensus	ref_cov=4/0	total_cov=72/0
RA	1226	.	NC_007793	618016	0	T	C	bias_e_value=2917470	bias_p_value=1	consensus_score=203.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=159/5	major_frequency=9.371e-01	minor_base=T	minor_cov=11/0	new_cov=159/5	polymorphism_frequency=9.371e-01	polymorphism_score=7.0	prediction=consensus	ref_cov=11/0	total_cov=170/5
RA	1227	.	NC_007793	618019	0	C	T	bias_e_value=2645310	bias_p_value=0.906713	consensus_score=76.1	fisher_strand_p_value=0.626553	frequency=7.634e-01	ks_quality_p_value=0.958299	major_base=T	major_cov=96/4	major_frequency=7.634e-01	minor_base=C	minor_cov=29/2	new_cov=96/4	polymorphism_frequency=7.634e-01	polymorphism_score=44.1	prediction=polymorphism	ref_cov=29/2	total_cov=125/6
RA	1228	.	NC_007793	618026	0	T	G	bias_e_value=2616430	bias_p_value=0.896814	consensus_score=119.1	fisher_strand_p_value=0.603647	frequency=2.077e-01	ks_quality_p_value=0.963486	major_base=T	major_cov=99/4	major_frequency=7.923e-01	minor_base=G	minor_cov=25/2	new_cov=25/2	polymorphism_frequency=2.077e-01	polymorphism_score=51.1	prediction=polymorphism	ref_cov=99/4	total_cov=124/6
RA	1229	.	NC_007793	618037	0	C	T	bias_e_value=2863490	bias_p_value=0.981499	consensus_score=4.1	fisher_strand_p_value=1	frequency=5.725e-01	ks_quality_p_value=0.813912	major_base=T	major_cov=71/4	major_frequency=5.725e-01	minor_base=C	minor_cov=54/2	new_cov=71/4	polymorphism_frequency=5.725e-01	polymorphism_score=95.4	prediction=polymorphism	ref_cov=54/2	total_cov=125/6
RA	1230	.	NC_007793	618040	0	A	T	bias_e_value=543080	bias_p_value=0.186148	consensus_score=85.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.0455164	major_base=T	major_cov=104/5	major_frequency=8.258e-01	minor_base=A	minor_cov=22/1	new_cov=104/5	polymorphism_frequency=8.258e-01	polymorphism_score=40.8	prediction=consensus	ref_cov=22/1	total_cov=126/6
RA	1231	.	NC_007793	618044	0	T	G	bias_e_value=2384130	bias_p_value=0.81719	consensus_score=89.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.459982	major_base=G	major_cov=107/5	major_frequency=8.550e-01	minor_base=T	minor_cov=18/1	new_cov=107/5	polymorphism_frequency=8.550e-01	polymorphism_score=34.8	prediction=consensus	ref_cov=18/1	total_cov=125/6
RA	1232	.	NC_007793	618062	0	T	G	bias_e_value=23696	bias_p_value=0.0081221	consensus_score=79.8	fisher_strand_p_value=0.518119	frequency=1	ks_quality_p_value=0.00199008	major_base=G	major_cov=98/5	major_frequency=8.879e-01	minor_base=T	minor_cov=12/1	new_cov=98/5	polymorphism_frequency=8.879e-01	polymorphism_score=20.9	prediction=consensus	ref_cov=12/1	total_cov=110/6
RA	1233	.	NC_007793	618073	0	C	T	bias_e_value=2028570	bias_p_value=0.695318	consensus_score=8.9	fisher_strand_p_value=0.411362	frequency=6.374e-01	ks_quality_p_value=0.801029	major_base=T	major_cov=53/5	major_frequency=6.374e-01	minor_base=C	minor_cov=32/1	new_cov=53/5	polymorphism_frequency=6.374e-01	polymorphism_score=50.9	prediction=polymorphism	ref_cov=32/1	total_cov=86/6
RA	1234	.	NC_007793	618076	0	A	T	bias_e_value=2216000	bias_p_value=0.759564	consensus_score=89.2	fisher_strand_p_value=1	frequency=2.113e-01	ks_quality_p_value=0.39249	major_base=A	major_cov=52/4	major_frequency=7.887e-01	minor_base=T	minor_cov=14/1	new_cov=14/1	polymorphism_frequency=2.113e-01	polymorphism_score=26.7	prediction=polymorphism	ref_cov=52/4	total_cov=66/5
RA	1235	.	NC_007793	618080	0	T	G	bias_e_value=2881370	bias_p_value=0.987627	consensus_score=73.8	fisher_strand_p_value=1	frequency=3.188e-01	ks_quality_p_value=0.846873	major_base=T	major_cov=43/4	major_frequency=6.812e-01	minor_base=G	minor_cov=21/1	new_cov=21/1	polymorphism_frequency=3.188e-01	polymorphism_score=46.1	prediction=polymorphism	ref_cov=43/4	total_cov=64/5
RA	1236	.	NC_007793	618082	0	A	G	bias_e_value=2917470	bias_p_value=1	consensus_score=79.0	fisher_strand_p_value=1	frequency=2.059e-01	ks_quality_p_value=1	major_base=A	major_cov=50/4	major_frequency=7.941e-01	minor_base=G	minor_cov=13/1	new_cov=13/1	polymorphism_frequency=2.059e-01	polymorphism_score=14.2	prediction=polymorphism	ref_cov=50/4	total_cov=64/5
RA	1237	.	NC_007793	618085	0	T	C	bias_e_value=2687900	bias_p_value=0.921311	consensus_score=-3.7	fisher_strand_p_value=0.64208	frequency=6.176e-01	ks_quality_p_value=0.981957	major_base=C	major_cov=38/4	major_frequency=6.176e-01	minor_base=T	minor_cov=25/1	new_cov=38/4	polymorphism_frequency=6.176e-01	polymorphism_score=48.0	prediction=polymorphism	ref_cov=25/1	total_cov=64/5
RA	1238	.	NC_007793	618098	0	T	G	bias_e_value=2911230	bias_p_value=0.99786	consensus_score=31.2	fisher_strand_p_value=1	frequency=4.348e-01	ks_quality_p_value=0.935298	major_base=T	major_cov=12/1	major_frequency=5.652e-01	minor_base=G	minor_cov=10/0	new_cov=10/0	polymorphism_frequency=4.348e-01	polymorphism_score=15.9	prediction=polymorphism	ref_cov=12/1	total_cov=23/1
RA	1239	.	NC_007793	618172	0	G	A	bias_e_value=974906	bias_p_value=0.334162	consensus_score=1.9	fisher_strand_p_value=1	frequency=5.000e-01	ks_quality_p_value=0.101701	major_base=G	major_cov=7/0	major_frequency=5.000e-01	minor_base=A	minor_cov=7/0	new_cov=7/0	polymorphism_frequency=5.000e-01	polymorphism_score=10.5	prediction=polymorphism	ref_cov=7/0	total_cov=14/0
RA	1240	.	NC_007793	618205	0	C	.	bias_e_value=2852620	bias_p_value=0.977772	consensus_score=16.6	fisher_strand_p_value=1	frequency=3.125e-01	ks_quality_p_value=0.796703	major_base=C	major_cov=11/0	major_frequency=6.875e-01	minor_base=.	minor_cov=5/0	new_cov=5/0	polymorphism_frequency=3.125e-01	polymorphism_score=13.5	prediction=polymorphism	ref_cov=11/0	total_cov=17/0
RA	1241	.	NC_007793	621793	0	T	C	bias_e_value=2898850	bias_p_value=0.993619	consensus_score=33.1	fisher_strand_p_value=1	frequency=4.384e-01	ks_quality_p_value=0.889175	major_base=T	major_cov=40/1	major_frequency=5.616e-01	minor_base=C	minor_cov=32/0	new_cov=32/0	polymorphism_frequency=4.384e-01	polymorphism_score=56.8	prediction=polymorphism	ref_cov=40/1	total_cov=72/1
RA	1242	.	NC_007793	621796	0	A	T	bias_e_value=1331240	bias_p_value=0.456299	consensus_score=17.4	fisher_strand_p_value=0.361111	frequency=6.389e-01	ks_quality_p_value=0.447754	major_base=T	major_cov=46/0	major_frequency=6.389e-01	minor_base=A	minor_cov=25/1	new_cov=46/0	polymorphism_frequency=6.389e-01	polymorphism_score=56.4	prediction=polymorphism	ref_cov=25/1	total_cov=72/1
RA	1243	.	NC_007793	621800	0	T	G	bias_e_value=2732640	bias_p_value=0.936647	consensus_score=8.3	fisher_strand_p_value=1	frequency=7.639e-01	ks_quality_p_value=0.665854	major_base=G	major_cov=54/1	major_frequency=7.639e-01	minor_base=T	minor_cov=17/0	new_cov=54/1	polymorphism_frequency=7.639e-01	polymorphism_score=35.6	prediction=polymorphism	ref_cov=17/0	total_cov=72/1
RA	1244	.	NC_007793	621802	0	A	G	bias_e_value=252584	bias_p_value=0.0865765	consensus_score=23.3	fisher_strand_p_value=0.410959	frequency=5.890e-01	ks_quality_p_value=0.0415515	major_base=G	major_cov=43/0	major_frequency=5.890e-01	minor_base=A	minor_cov=29/1	new_cov=43/0	polymorphism_frequency=5.890e-01	polymorphism_score=57.8	prediction=polymorphism	ref_cov=29/1	total_cov=72/1
RA	1245	.	NC_007793	621811	0	C	T	bias_e_value=5785.7	bias_p_value=0.00198312	consensus_score=198.1	fisher_strand_p_value=0.566257	frequency=7.287e-01	ks_quality_p_value=0.000369764	major_base=T	major_cov=330/3	major_frequency=7.287e-01	minor_base=C	minor_cov=124/0	new_cov=330/3	polymorphism_frequency=7.287e-01	polymorphism_score=204.4	prediction=polymorphism	ref_cov=124/0	total_cov=454/3
RA	1246	.	NC_007793	621817	0	T	C	bias_e_value=1600270	bias_p_value=0.548513	consensus_score=325.8	fisher_strand_p_value=0.294102	frequency=1	ks_quality_p_value=0.737768	major_base=C	major_cov=378/1	major_frequency=8.404e-01	minor_base=T	minor_cov=71/1	new_cov=378/1	polymorphism_frequency=8.404e-01	polymorphism_score=118.9	prediction=consensus	ref_cov=71/1	total_cov=452/3
RA	1247	.	NC_007793	621818	0	T	G	bias_e_value=852.532	bias_p_value=0.000292216	consensus_score=330.3	fisher_strand_p_value=0.396366	frequency=1	ks_quality_p_value=6.3621e-05	major_base=G	major_cov=381/2	major_frequency=8.455e-01	minor_base=T	minor_cov=69/1	new_cov=381/2	polymorphism_frequency=8.455e-01	polymorphism_score=151.1	prediction=consensus	ref_cov=69/1	total_cov=452/3
RA	1248	.	NC_007793	621829	0	C	T	bias_e_value=22316.1	bias_p_value=0.00764912	consensus_score=459.0	fisher_strand_p_value=0.000963316	frequency=1	ks_quality_p_value=0.999319	major_base=T	major_cov=559/4	major_frequency=9.337e-01	minor_base=C	minor_cov=36/4	new_cov=559/4	polymorphism_frequency=9.337e-01	polymorphism_score=38.4	prediction=consensus	ref_cov=36/4	total_cov=596/8
RA	1249	.	NC_007793	621832	0	A	T	bias_e_value=2917470	bias_p_value=1	consensus_score=236.2	fisher_strand_p_value=1	frequency=7.512e-01	ks_quality_p_value=1	major_base=T	major_cov=471/6	major_frequency=7.512e-01	minor_base=A	minor_cov=156/2	new_cov=471/6	polymorphism_frequency=7.512e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=156/2	total_cov=627/8
RA	1250	.	NC_007793	621836	0	T	G	bias_e_value=944938	bias_p_value=0.32389	consensus_score=473.8	fisher_strand_p_value=0.176572	frequency=1	ks_quality_p_value=0.55077	major_base=G	major_cov=650/8	major_frequency=9.229e-01	minor_base=T	minor_cov=53/2	new_cov=650/8	polymorphism_frequency=9.229e-01	polymorphism_score=94.2	prediction=consensus	ref_cov=53/2	total_cov=704/10
RA	1251	.	NC_007793	621854	0	T	G	bias_e_value=1721290	bias_p_value=0.589995	consensus_score=740.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.245287	major_base=G	major_cov=794/10	major_frequency=9.853e-01	minor_base=T	minor_cov=12/0	new_cov=794/10	polymorphism_frequency=9.853e-01	polymorphism_score=9.0	prediction=consensus	ref_cov=12/0	total_cov=807/10
RA	1252	.	NC_007793	621865	0	C	T	bias_e_value=73632.3	bias_p_value=0.0252384	consensus_score=713.3	fisher_strand_p_value=0.00384706	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=770/7	major_frequency=9.652e-01	minor_base=C	minor_cov=25/3	new_cov=770/7	polymorphism_frequency=9.652e-01	polymorphism_score=14.5	prediction=consensus	ref_cov=25/3	total_cov=800/10
RA	1253	.	NC_007793	621868	0	A	T	bias_e_value=1943790	bias_p_value=0.666259	consensus_score=496.4	fisher_strand_p_value=0.469224	frequency=2.650e-01	ks_quality_p_value=0.648376	major_base=A	major_cov=554/9	major_frequency=7.350e-01	minor_base=T	minor_cov=202/1	new_cov=202/1	polymorphism_frequency=2.650e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=554/9	total_cov=763/10
RA	1254	.	NC_007793	621872	0	T	G	bias_e_value=1426300	bias_p_value=0.488883	consensus_score=393.9	fisher_strand_p_value=0.180128	frequency=3.581e-01	ks_quality_p_value=1	major_base=T	major_cov=489/4	major_frequency=6.419e-01	minor_base=G	minor_cov=269/6	new_cov=269/6	polymorphism_frequency=3.581e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=489/4	total_cov=763/10
RA	1255	.	NC_007793	621874	0	A	G	bias_e_value=2917470	bias_p_value=1	consensus_score=503.3	fisher_strand_p_value=1	frequency=2.597e-01	ks_quality_p_value=1	major_base=A	major_cov=562/8	major_frequency=7.403e-01	minor_base=G	minor_cov=198/2	new_cov=198/2	polymorphism_frequency=2.597e-01	polymorphism_score=303.5	prediction=polymorphism	ref_cov=562/8	total_cov=763/10
RA	1256	.	NC_007793	621877	0	T	C	bias_e_value=2787910	bias_p_value=0.955593	consensus_score=430.0	fisher_strand_p_value=1	frequency=3.216e-01	ks_quality_p_value=0.717186	major_base=T	major_cov=514/7	major_frequency=6.784e-01	minor_base=C	minor_cov=244/3	new_cov=244/3	polymorphism_frequency=3.216e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=514/7	total_cov=761/10
RA	1257	.	NC_007793	621886	0	A	T	bias_e_value=2697260	bias_p_value=0.924521	consensus_score=0.3	fisher_strand_p_value=1	frequency=5.596e-01	ks_quality_p_value=0.637539	major_base=T	major_cov=314/5	major_frequency=5.596e-01	minor_base=A	minor_cov=248/3	new_cov=314/5	polymorphism_frequency=5.596e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=248/3	total_cov=563/8
RA	1258	.	NC_007793	621889	0	C	T	bias_e_value=2757190	bias_p_value=0.945064	consensus_score=322.2	fisher_strand_p_value=0.687398	frequency=7.377e-01	ks_quality_p_value=1	major_base=T	major_cov=412/7	major_frequency=7.377e-01	minor_base=C	minor_cov=148/1	new_cov=412/7	polymorphism_frequency=7.377e-01	polymorphism_score=233.1	prediction=polymorphism	ref_cov=148/1	total_cov=563/8
RA	1259	.	NC_007793	621890	0	T	G	bias_e_value=275.301	bias_p_value=9.43628e-05	consensus_score=198.1	fisher_strand_p_value=1	frequency=7.965e-01	ks_quality_p_value=7.36098e-06	major_base=G	major_cov=444/6	major_frequency=7.965e-01	minor_base=T	minor_cov=114/1	new_cov=444/6	polymorphism_frequency=7.965e-01	polymorphism_score=267.0	prediction=polymorphism	ref_cov=114/1	total_cov=561/8
RA	1260	.	NC_007793	621892	0	A	G	bias_e_value=71.1534	bias_p_value=2.43887e-05	consensus_score=5.5	fisher_strand_p_value=1	frequency=5.564e-01	ks_quality_p_value=1.70786e-06	major_base=G	major_cov=306/5	major_frequency=5.564e-01	minor_base=A	minor_cov=245/3	new_cov=306/5	polymorphism_frequency=5.564e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=245/3	total_cov=554/8
RA	1261	.	NC_007793	621901	0	C	T	bias_e_value=1594.49	bias_p_value=0.000546533	consensus_score=11.0	fisher_strand_p_value=0.516608	frequency=6.705e-01	ks_quality_p_value=9.70507e-05	major_base=T	major_cov=289/6	major_frequency=6.705e-01	minor_base=C	minor_cov=140/5	new_cov=289/6	polymorphism_frequency=6.705e-01	polymorphism_score=253.9	prediction=polymorphism	ref_cov=140/5	total_cov=430/11
RA	1262	.	NC_007793	621907	0	T	C	bias_e_value=1343570	bias_p_value=0.460527	consensus_score=179.2	fisher_strand_p_value=0.231547	frequency=7.154e-01	ks_quality_p_value=0.70836	major_base=C	major_cov=275/4	major_frequency=7.154e-01	minor_base=T	minor_cov=107/4	new_cov=275/4	polymorphism_frequency=7.154e-01	polymorphism_score=201.0	prediction=polymorphism	ref_cov=107/4	total_cov=382/9
RA	1263	.	NC_007793	621908	0	T	G	bias_e_value=289.219	bias_p_value=9.91336e-05	consensus_score=178.3	fisher_strand_p_value=0.062108	frequency=7.320e-01	ks_quality_p_value=0.000125033	major_base=G	major_cov=280/4	major_frequency=7.320e-01	minor_base=T	minor_cov=99/5	new_cov=280/4	polymorphism_frequency=7.320e-01	polymorphism_score=243.4	prediction=polymorphism	ref_cov=99/5	total_cov=381/9
RA	1264	.	NC_007793	621922	0	G	T	bias_e_value=1447860	bias_p_value=0.496273	consensus_score=27.3	fisher_strand_p_value=1	frequency=6.310e-01	ks_quality_p_value=0.18447	major_base=T	major_cov=168/3	major_frequency=6.310e-01	minor_base=A	minor_cov=99/1	new_cov=168/3	polymorphism_frequency=6.310e-01	polymorphism_score=233.4	prediction=polymorphism	ref_cov=17/1	total_cov=285/5
RA	1265	.	NC_007793	621925	0	C	T	bias_e_value=516820	bias_p_value=0.177147	consensus_score=75.2	fisher_strand_p_value=0.0486151	frequency=4.734e-01	ks_quality_p_value=0.876957	major_base=C	major_cov=109/0	major_frequency=5.266e-01	minor_base=T	minor_cov=94/4	new_cov=94/4	polymorphism_frequency=4.734e-01	polymorphism_score=215.9	prediction=polymorphism	ref_cov=109/0	total_cov=203/4
RA	1266	.	NC_007793	621926	0	T	G	bias_e_value=1478660	bias_p_value=0.50683	consensus_score=206.5	fisher_strand_p_value=0.230033	frequency=1	ks_quality_p_value=0.829352	major_base=G	major_cov=191/3	major_frequency=9.372e-01	minor_base=T	minor_cov=12/1	new_cov=191/3	polymorphism_frequency=9.372e-01	polymorphism_score=18.9	prediction=consensus	ref_cov=12/1	total_cov=203/4
RA	1267	.	NC_007793	621928	0	A	G	bias_e_value=965604	bias_p_value=0.330973	consensus_score=85.0	fisher_strand_p_value=0.102272	frequency=4.703e-01	ks_quality_p_value=0.980822	major_base=A	major_cov=107/0	major_frequency=5.297e-01	minor_base=G	minor_cov=92/3	new_cov=92/3	polymorphism_frequency=4.703e-01	polymorphism_score=180.9	prediction=polymorphism	ref_cov=107/0	total_cov=201/3
RA	1268	.	NC_007793	621931	0	C	T	bias_e_value=1166.59	bias_p_value=0.000399865	consensus_score=55.3	fisher_strand_p_value=0.312166	frequency=3.112e-01	ks_quality_p_value=0.000113919	major_base=C	major_cov=131/4	major_frequency=6.888e-01	minor_base=T	minor_cov=61/0	new_cov=61/0	polymorphism_frequency=3.112e-01	polymorphism_score=117.1	prediction=polymorphism	ref_cov=131/4	total_cov=192/4
RA	1269	.	NC_007793	621944	0	T	G	bias_e_value=1756950	bias_p_value=0.602218	consensus_score=89.4	fisher_strand_p_value=0.439469	frequency=1	ks_quality_p_value=0.578187	major_base=G	major_cov=116/5	major_frequency=9.098e-01	minor_base=T	minor_cov=11/1	new_cov=116/5	polymorphism_frequency=9.098e-01	polymorphism_score=15.1	prediction=consensus	ref_cov=11/1	total_cov=127/6
RA	1270	.	NC_007793	621955	0	C	T	bias_e_value=2314780	bias_p_value=0.79342	consensus_score=34.9	fisher_strand_p_value=0.67007	frequency=6.279e-01	ks_quality_p_value=0.642632	major_base=T	major_cov=78/3	major_frequency=6.279e-01	minor_base=C	minor_cov=45/3	new_cov=78/3	polymorphism_frequency=6.279e-01	polymorphism_score=88.8	prediction=polymorphism	ref_cov=45/3	total_cov=123/6
RA	1271	.	NC_007793	621958	0	A	T	bias_e_value=2692970	bias_p_value=0.923051	consensus_score=76.3	fisher_strand_p_value=0.676423	frequency=3.876e-01	ks_quality_p_value=0.937716	major_base=A	major_cov=76/3	major_frequency=6.124e-01	minor_base=T	minor_cov=47/3	new_cov=47/3	polymorphism_frequency=3.876e-01	polymorphism_score=121.3	prediction=polymorphism	ref_cov=76/3	total_cov=123/6
RA	1272	.	NC_007793	621961	0	C	T	bias_e_value=2294870	bias_p_value=0.786596	consensus_score=101.4	fisher_strand_p_value=0.423337	frequency=1	ks_quality_p_value=0.998253	major_base=T	major_cov=112/5	major_frequency=9.141e-01	minor_base=C	minor_cov=10/1	new_cov=112/5	polymorphism_frequency=9.141e-01	polymorphism_score=7.2	prediction=consensus	ref_cov=10/1	total_cov=123/6
RA	1273	.	NC_007793	621962	0	T	G	bias_e_value=2907670	bias_p_value=0.99664	consensus_score=83.7	fisher_strand_p_value=1	frequency=3.798e-01	ks_quality_p_value=0.91915	major_base=T	major_cov=76/4	major_frequency=6.202e-01	minor_base=G	minor_cov=47/2	new_cov=47/2	polymorphism_frequency=3.798e-01	polymorphism_score=118.6	prediction=polymorphism	ref_cov=76/4	total_cov=123/6
RA	1274	.	NC_007793	621964	0	A	G	bias_e_value=2916430	bias_p_value=0.999645	consensus_score=87.7	fisher_strand_p_value=1	frequency=3.023e-01	ks_quality_p_value=0.973484	major_base=A	major_cov=86/4	major_frequency=6.977e-01	minor_base=G	minor_cov=37/2	new_cov=37/2	polymorphism_frequency=3.023e-01	polymorphism_score=64.6	prediction=polymorphism	ref_cov=86/4	total_cov=123/6
RA	1275	.	NC_007793	621979	0	T	C	bias_e_value=2890610	bias_p_value=0.990794	consensus_score=0.2	fisher_strand_p_value=1	frequency=5.470e-01	ks_quality_p_value=0.867417	major_base=C	major_cov=61/3	major_frequency=5.470e-01	minor_base=T	minor_cov=50/3	new_cov=61/3	polymorphism_frequency=5.470e-01	polymorphism_score=112.1	prediction=polymorphism	ref_cov=50/3	total_cov=111/6
RA	1276	.	NC_007793	621980	0	T	G	bias_e_value=27943.2	bias_p_value=0.00957788	consensus_score=-4.2	fisher_strand_p_value=1	frequency=5.470e-01	ks_quality_p_value=0.00124583	major_base=G	major_cov=61/3	major_frequency=5.470e-01	minor_base=T	minor_cov=50/3	new_cov=61/3	polymorphism_frequency=5.470e-01	polymorphism_score=134.4	prediction=polymorphism	ref_cov=50/3	total_cov=111/6
RA	1277	.	NC_007793	621985	0	T	C	bias_e_value=2470700	bias_p_value=0.846864	consensus_score=76.9	fisher_strand_p_value=1	frequency=3.333e-01	ks_quality_p_value=0.50042	major_base=T	major_cov=74/4	major_frequency=6.667e-01	minor_base=C	minor_cov=37/2	new_cov=37/2	polymorphism_frequency=3.333e-01	polymorphism_score=65.3	prediction=polymorphism	ref_cov=74/4	total_cov=111/6
RA	1278	.	NC_007793	621994	0	G	A	bias_e_value=2510490	bias_p_value=0.860503	consensus_score=27.2	fisher_strand_p_value=0.520707	frequency=7.849e-01	ks_quality_p_value=1	major_base=A	major_cov=71/2	major_frequency=7.849e-01	minor_base=G	minor_cov=19/1	new_cov=71/2	polymorphism_frequency=7.849e-01	polymorphism_score=22.9	prediction=polymorphism	ref_cov=19/1	total_cov=91/3
RA	1279	.	NC_007793	621998	0	T	G	bias_e_value=1260080	bias_p_value=0.431908	consensus_score=10.3	fisher_strand_p_value=0.462295	frequency=1	ks_quality_p_value=0.321443	major_base=G	major_cov=73/2	major_frequency=8.152e-01	minor_base=T	minor_cov=16/1	new_cov=73/2	polymorphism_frequency=8.152e-01	polymorphism_score=39.0	prediction=consensus	ref_cov=16/1	total_cov=91/3
RA	1280	.	NC_007793	622009	0	C	T	bias_e_value=184650	bias_p_value=0.0632912	consensus_score=54.8	fisher_strand_p_value=0.588831	frequency=4.545e-01	ks_quality_p_value=0.0196973	major_base=C	major_cov=47/1	major_frequency=5.455e-01	minor_base=T	minor_cov=38/2	new_cov=38/2	polymorphism_frequency=4.545e-01	polymorphism_score=85.4	prediction=polymorphism	ref_cov=47/1	total_cov=86/3
RA	1281	.	NC_007793	622012	0	A	T	bias_e_value=2759750	bias_p_value=0.94594	consensus_score=-2.7	fisher_strand_p_value=1	frequency=7.143e-01	ks_quality_p_value=0.689748	major_base=T	major_cov=63/2	major_frequency=7.143e-01	minor_base=A	minor_cov=25/1	new_cov=63/2	polymorphism_frequency=7.143e-01	polymorphism_score=55.2	prediction=polymorphism	ref_cov=25/1	total_cov=88/3
RA	1282	.	NC_007793	622016	0	T	G	bias_e_value=2774790	bias_p_value=0.951097	consensus_score=-1.9	fisher_strand_p_value=1	frequency=7.444e-01	ks_quality_p_value=0.704025	major_base=G	major_cov=65/2	major_frequency=7.444e-01	minor_base=T	minor_cov=22/1	new_cov=65/2	polymorphism_frequency=7.444e-01	polymorphism_score=52.9	prediction=polymorphism	ref_cov=22/1	total_cov=87/3
RA	1283	.	NC_007793	622018	0	A	G	bias_e_value=1071320	bias_p_value=0.36721	consensus_score=-6.2	fisher_strand_p_value=1	frequency=6.947e-01	ks_quality_p_value=0.116617	major_base=G	major_cov=64/2	major_frequency=6.947e-01	minor_base=A	minor_cov=28/1	new_cov=64/2	polymorphism_frequency=6.947e-01	polymorphism_score=53.0	prediction=polymorphism	ref_cov=28/1	total_cov=92/3
RA	1284	.	NC_007793	622034	0	T	G	bias_e_value=329361	bias_p_value=0.112893	consensus_score=33.9	fisher_strand_p_value=1	frequency=6.714e-01	ks_quality_p_value=0.0238339	major_base=G	major_cov=47/0	major_frequency=6.714e-01	minor_base=T	minor_cov=23/0	new_cov=47/0	polymorphism_frequency=6.714e-01	polymorphism_score=56.6	prediction=polymorphism	ref_cov=23/0	total_cov=70/0
RA	1285	.	NC_007793	622045	0	C	T	bias_e_value=1293300	bias_p_value=0.443296	consensus_score=44.7	fisher_strand_p_value=1	frequency=3.000e-01	ks_quality_p_value=0.154638	major_base=C	major_cov=28/0	major_frequency=7.000e-01	minor_base=T	minor_cov=12/0	new_cov=12/0	polymorphism_frequency=3.000e-01	polymorphism_score=19.5	prediction=polymorphism	ref_cov=28/0	total_cov=40/0
RA	1286	.	NC_007793	622052	0	T	G	bias_e_value=2917460	bias_p_value=0.999998	consensus_score=59.5	fisher_strand_p_value=1	frequency=3.500e-01	ks_quality_p_value=0.997805	major_base=T	major_cov=26/0	major_frequency=6.500e-01	minor_base=G	minor_cov=14/0	new_cov=14/0	polymorphism_frequency=3.500e-01	polymorphism_score=24.6	prediction=polymorphism	ref_cov=26/0	total_cov=40/0
RA	1287	.	NC_007793	622057	0	C	T	bias_e_value=2917470	bias_p_value=1	consensus_score=46.6	fisher_strand_p_value=1	frequency=3.750e-01	ks_quality_p_value=1	major_base=C	major_cov=25/0	major_frequency=6.250e-01	minor_base=T	minor_cov=15/0	new_cov=15/0	polymorphism_frequency=3.750e-01	polymorphism_score=25.9	prediction=polymorphism	ref_cov=25/0	total_cov=41/0
RA	1288	.	NC_007793	622060	0	T	C	bias_e_value=2395470	bias_p_value=0.821077	consensus_score=38.1	fisher_strand_p_value=1	frequency=4.634e-01	ks_quality_p_value=0.465024	major_base=T	major_cov=22/0	major_frequency=5.366e-01	minor_base=C	minor_cov=19/0	new_cov=19/0	polymorphism_frequency=4.634e-01	polymorphism_score=29.3	prediction=polymorphism	ref_cov=22/0	total_cov=42/0
RA	1289	.	NC_007793	622066	0	A	T	bias_e_value=2902570	bias_p_value=0.994893	consensus_score=45.5	fisher_strand_p_value=1	frequency=4.792e-01	ks_quality_p_value=0.900651	major_base=A	major_cov=25/0	major_frequency=5.208e-01	minor_base=T	minor_cov=23/0	new_cov=23/0	polymorphism_frequency=4.792e-01	polymorphism_score=54.0	prediction=polymorphism	ref_cov=25/0	total_cov=48/0
RA	1290	.	NC_007793	622070	0	T	G	bias_e_value=2571370	bias_p_value=0.881369	consensus_score=42.7	fisher_strand_p_value=1	frequency=5.417e-01	ks_quality_p_value=0.554308	major_base=G	major_cov=26/0	major_frequency=5.417e-01	minor_base=T	minor_cov=22/0	new_cov=26/0	polymorphism_frequency=5.417e-01	polymorphism_score=57.8	prediction=polymorphism	ref_cov=22/0	total_cov=48/0
RA	1291	.	NC_007793	622072	0	A	G	bias_e_value=2676790	bias_p_value=0.917504	consensus_score=36.4	fisher_strand_p_value=1	frequency=4.043e-01	ks_quality_p_value=0.622355	major_base=A	major_cov=28/0	major_frequency=5.957e-01	minor_base=G	minor_cov=19/0	new_cov=19/0	polymorphism_frequency=4.043e-01	polymorphism_score=30.3	prediction=polymorphism	ref_cov=28/0	total_cov=48/0
RA	1292	.	NC_007793	622088	0	T	G	bias_e_value=138567	bias_p_value=0.0474958	consensus_score=30.8	fisher_strand_p_value=1	frequency=6.383e-01	ks_quality_p_value=0.00818045	major_base=G	major_cov=30/0	major_frequency=6.383e-01	minor_base=T	minor_cov=17/0	new_cov=30/0	polymorphism_frequency=6.383e-01	polymorphism_score=41.3	prediction=polymorphism	ref_cov=17/0	total_cov=47/0
RA	1293	.	NC_007793	622099	0	C	T	bias_e_value=2913840	bias_p_value=0.998755	consensus_score=12.7	fisher_strand_p_value=1	frequency=6.316e-01	ks_quality_p_value=0.950514	major_base=T	major_cov=24/0	major_frequency=6.316e-01	minor_base=C	minor_cov=14/0	new_cov=24/0	polymorphism_frequency=6.316e-01	polymorphism_score=18.7	prediction=polymorphism	ref_cov=14/0	total_cov=39/0
RA	1294	.	NC_007793	622102	0	A	T	bias_e_value=1941170	bias_p_value=0.66536	consensus_score=19.3	fisher_strand_p_value=1	frequency=5.128e-01	ks_quality_p_value=0.303479	major_base=T	major_cov=20/0	major_frequency=5.128e-01	minor_base=A	minor_cov=19/0	new_cov=20/0	polymorphism_frequency=5.128e-01	polymorphism_score=43.3	prediction=polymorphism	ref_cov=19/0	total_cov=39/0
RA	1295	.	NC_007793	622106	0	T	G	bias_e_value=2878640	bias_p_value=0.986692	consensus_score=12.3	fisher_strand_p_value=1	frequency=6.842e-01	ks_quality_p_value=0.841357	major_base=G	major_cov=26/0	major_frequency=6.842e-01	minor_base=T	minor_cov=12/0	new_cov=26/0	polymorphism_frequency=6.842e-01	polymorphism_score=25.8	prediction=polymorphism	ref_cov=12/0	total_cov=39/0
RA	1296	.	NC_007793	622117	0	C	T	bias_e_value=2917460	bias_p_value=0.999998	consensus_score=11.3	fisher_strand_p_value=1	frequency=5.600e-01	ks_quality_p_value=0.997924	major_base=T	major_cov=14/0	major_frequency=5.600e-01	minor_base=C	minor_cov=11/0	new_cov=14/0	polymorphism_frequency=5.600e-01	polymorphism_score=14.4	prediction=polymorphism	ref_cov=11/0	total_cov=25/0
RA	1297	.	NC_007793	624742	0	T	G	bias_e_value=267.774	bias_p_value=9.1783e-05	consensus_score=74.5	fisher_strand_p_value=7.14299e-06	frequency=2.439e-01	ks_quality_p_value=1	major_base=T	major_cov=6/25	major_frequency=7.561e-01	minor_base=G	minor_cov=10/0	new_cov=10/0	polymorphism_frequency=2.439e-01	polymorphism_score=10.3	prediction=polymorphism	ref_cov=6/25	total_cov=16/25
RA	1298	.	NC_007793	629078	0	A	G	bias_e_value=2917470	bias_p_value=1	consensus_score=1183.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=414/2	major_frequency=9.976e-01	minor_base=C	minor_cov=1/0	new_cov=414/2	polymorphism_frequency=9.976e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=415/2
RA	1299	.	NC_007793	635213	0	A	G	consensus_score=19.2	frequency=1	major_base=G	major_cov=8/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=8/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=8/1
RA	1300	.	NC_007793	639348	0	A	G	consensus_score=706.4	frequency=1	major_base=G	major_cov=245/2	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=245/2	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=245/2
RA	1301	.	NC_007793	645781	0	G	T	bias_e_value=747235	bias_p_value=0.256124	consensus_score=759.9	fisher_strand_p_value=0.0754163	frequency=2.340e-01	ks_quality_p_value=0.928062	major_base=G	major_cov=395/11	major_frequency=7.660e-01	minor_base=T	minor_cov=124/0	new_cov=124/0	polymorphism_frequency=2.340e-01	polymorphism_score=131.0	prediction=polymorphism	ref_cov=395/11	total_cov=523/11
RA	1302	.	NC_007793	646599	0	A	C	consensus_score=411.9	frequency=1	major_base=C	major_cov=155/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=155/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=155/1
RA	1303	.	NC_007793	648732	0	A	G	consensus_score=133.1	frequency=1	major_base=G	major_cov=49/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=49/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=49/1
RA	1304	.	NC_007793	650151	0	T	A	bias_e_value=2912140	bias_p_value=0.998174	consensus_score=279.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.940185	major_base=A	major_cov=96/6	major_frequency=9.903e-01	minor_base=G	minor_cov=1/0	new_cov=96/6	polymorphism_frequency=9.903e-01	polymorphism_score=-5.3	prediction=consensus	ref_cov=0/0	total_cov=97/6
RA	1305	.	NC_007793	656344	0	A	T	consensus_score=46.3	frequency=1	major_base=T	major_cov=8/11	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=8/11	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=8/11
RA	1306	.	NC_007793	656345	0	A	T	consensus_score=46.3	frequency=1	major_base=T	major_cov=8/11	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=8/11	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=8/11
RA	1307	.	NC_007793	656348	0	G	T	consensus_score=46.4	frequency=1	major_base=T	major_cov=8/11	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=8/11	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=8/11
RA	1308	.	NC_007793	658463	0	A	T	consensus_score=17.2	frequency=1	major_base=T	major_cov=4/4	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=4/4	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=4/4
RA	1309	.	NC_007793	658465	0	T	A	consensus_score=16.9	frequency=1	major_base=A	major_cov=4/4	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=4/4	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=4/4
RA	1310	.	NC_007793	659368	0	G	A	consensus_score=89.6	frequency=1	major_base=A	major_cov=34/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=34/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=34/0
RA	1311	.	NC_007793	662424	0	G	T	consensus_score=15.8	frequency=1	major_base=T	major_cov=8/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=8/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=8/0
RA	1312	.	NC_007793	673027	0	C	T	consensus_score=149.2	frequency=1	major_base=T	major_cov=53/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=53/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=53/0
RA	1313	.	NC_007793	674503	0	A	C	bias_e_value=2213270	bias_p_value=0.758626	consensus_score=6.1	fisher_strand_p_value=1	frequency=4.211e-01	ks_quality_p_value=0.391489	major_base=A	major_cov=11/0	major_frequency=5.789e-01	minor_base=C	minor_cov=8/0	new_cov=8/0	polymorphism_frequency=4.211e-01	polymorphism_score=14.9	prediction=polymorphism	ref_cov=11/0	total_cov=19/0
RA	1314	.	NC_007793	674513	0	G	T	consensus_score=29.8	frequency=1	major_base=T	major_cov=12/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=12/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=12/0
RA	1315	.	NC_007793	683784	0	T	C	bias_e_value=2881180	bias_p_value=0.987562	consensus_score=47.3	fisher_strand_p_value=1	frequency=2.500e-01	ks_quality_p_value=0.846482	major_base=T	major_cov=25/2	major_frequency=7.500e-01	minor_base=C	minor_cov=9/0	new_cov=9/0	polymorphism_frequency=2.500e-01	polymorphism_score=10.8	prediction=polymorphism	ref_cov=25/2	total_cov=34/2
RA	1316	.	NC_007793	685031	1	.	G	bias_e_value=981576	bias_p_value=0.336448	consensus_score=4.8	fisher_strand_p_value=0.228571	frequency=4.000e-01	ks_quality_p_value=0.449329	major_base=.	major_cov=6/3	major_frequency=6.000e-01	minor_base=G	minor_cov=6/0	new_cov=6/0	polymorphism_frequency=4.000e-01	polymorphism_score=21.1	prediction=polymorphism	ref_cov=6/3	total_cov=12/3
RA	1317	.	NC_007793	689949	0	A	C	consensus_score=72.6	frequency=1	major_base=C	major_cov=29/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/0
RA	1318	.	NC_007793	690275	0	T	.	bias_e_value=533698	bias_p_value=0.182932	consensus_score=86.1	fisher_strand_p_value=0.56707	frequency=2.143e-01	ks_quality_p_value=0.0784374	major_base=T	major_cov=28/5	major_frequency=7.857e-01	minor_base=.	minor_cov=9/0	new_cov=9/0	polymorphism_frequency=2.143e-01	polymorphism_score=21.5	prediction=polymorphism	ref_cov=28/5	total_cov=38/5
RA	1319	.	NC_007793	697219	0	T	C	bias_e_value=953242	bias_p_value=0.326736	consensus_score=184.8	fisher_strand_p_value=0.0984752	frequency=3.168e-01	ks_quality_p_value=1	major_base=T	major_cov=7/103	major_frequency=6.832e-01	minor_base=C	minor_cov=0/51	new_cov=0/51	polymorphism_frequency=3.168e-01	polymorphism_score=50.2	prediction=polymorphism	ref_cov=7/103	total_cov=7/157
RA	1320	.	NC_007793	697236	0	A	G	bias_e_value=652488	bias_p_value=0.223648	consensus_score=167.4	fisher_strand_p_value=0.0581772	frequency=2.980e-01	ks_quality_p_value=1	major_base=A	major_cov=9/97	major_frequency=7.020e-01	minor_base=G	minor_cov=0/45	new_cov=0/45	polymorphism_frequency=2.980e-01	polymorphism_score=28.6	prediction=polymorphism	ref_cov=9/97	total_cov=9/143
RA	1321	.	NC_007793	697242	0	C	A	bias_e_value=642.343	bias_p_value=0.000220171	consensus_score=-3.8	fisher_strand_p_value=0.000762931	frequency=5.342e-01	ks_quality_p_value=0.0242561	major_base=A	major_cov=0/78	major_frequency=5.342e-01	minor_base=C	minor_cov=9/59	new_cov=0/78	polymorphism_frequency=5.342e-01	polymorphism_score=128.8	prediction=polymorphism	ref_cov=9/59	total_cov=9/137
RA	1322	.	NC_007793	697246	0	G	A	bias_e_value=1048660	bias_p_value=0.359443	consensus_score=127.4	fisher_strand_p_value=0.113028	frequency=2.448e-01	ks_quality_p_value=1	major_base=G	major_cov=9/99	major_frequency=7.552e-01	minor_base=A	minor_cov=0/35	new_cov=0/35	polymorphism_frequency=2.448e-01	polymorphism_score=35.9	prediction=polymorphism	ref_cov=9/99	total_cov=9/136
RA	1323	.	NC_007793	699838	0	C	T	consensus_score=297.7	frequency=1	major_base=T	major_cov=100/3	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=100/3	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=100/3
RA	1324	.	NC_007793	700471	0	A	T	bias_e_value=2889920	bias_p_value=0.990558	consensus_score=204.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.865763	major_base=T	major_cov=71/3	major_frequency=9.867e-01	minor_base=C	minor_cov=1/0	new_cov=71/3	polymorphism_frequency=9.867e-01	polymorphism_score=-5.6	prediction=consensus	ref_cov=1/0	total_cov=73/3
RA	1325	.	NC_007793	701325	0	T	C	bias_e_value=2895410	bias_p_value=0.992438	consensus_score=76.9	fisher_strand_p_value=1	frequency=2.632e-01	ks_quality_p_value=0.879571	major_base=T	major_cov=37/5	major_frequency=7.368e-01	minor_base=C	minor_cov=14/1	new_cov=14/1	polymorphism_frequency=2.632e-01	polymorphism_score=22.3	prediction=polymorphism	ref_cov=37/5	total_cov=51/6
RA	1326	.	NC_007793	710124	0	A	G	consensus_score=379.6	frequency=1	major_base=G	major_cov=133/4	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=133/4	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=133/4
RA	1327	.	NC_007793	710665	0	G	A	bias_e_value=155106	bias_p_value=0.0531647	consensus_score=155.9	fisher_strand_p_value=1	frequency=2.276e-01	ks_quality_p_value=0.00937739	major_base=G	major_cov=92/3	major_frequency=7.724e-01	minor_base=A	minor_cov=27/1	new_cov=27/1	polymorphism_frequency=2.276e-01	polymorphism_score=50.7	prediction=polymorphism	ref_cov=92/3	total_cov=119/4
RA	1328	.	NC_007793	714167	0	G	A	consensus_score=128.6	frequency=1	major_base=A	major_cov=46/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=46/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=46/0
RA	1329	.	NC_007793	715055	0	A	T	bias_e_value=2046990	bias_p_value=0.701632	consensus_score=122.0	fisher_strand_p_value=0.335245	frequency=2.099e-01	ks_quality_p_value=1	major_base=A	major_cov=57/7	major_frequency=7.901e-01	minor_base=T	minor_cov=17/0	new_cov=17/0	polymorphism_frequency=2.099e-01	polymorphism_score=11.6	prediction=polymorphism	ref_cov=57/7	total_cov=75/7
RA	1330	.	NC_007793	715315	0	T	G	bias_e_value=2910510	bias_p_value=0.997615	consensus_score=9.4	fisher_strand_p_value=1	frequency=3.889e-01	ks_quality_p_value=0.931735	major_base=T	major_cov=10/1	major_frequency=6.111e-01	minor_base=G	minor_cov=7/0	new_cov=7/0	polymorphism_frequency=3.889e-01	polymorphism_score=11.7	prediction=polymorphism	ref_cov=10/1	total_cov=17/1
RA	1331	.	NC_007793	716141	0	T	C	bias_e_value=10922.4	bias_p_value=0.00374379	consensus_score=27.9	fisher_strand_p_value=1	frequency=3.333e-01	ks_quality_p_value=0.000427492	major_base=T	major_cov=22/0	major_frequency=6.667e-01	minor_base=C	minor_cov=11/0	new_cov=11/0	polymorphism_frequency=3.333e-01	polymorphism_score=15.9	prediction=polymorphism	ref_cov=22/0	total_cov=34/0
RA	1332	.	NC_007793	716517	0	G	A	consensus_score=65.0	frequency=1	major_base=A	major_cov=25/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=25/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=25/1
RA	1333	.	NC_007793	721388	0	T	C	consensus_score=185.7	frequency=1	major_base=C	major_cov=71/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=71/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=71/1
RA	1334	.	NC_007793	725902	0	G	A	consensus_score=48.3	frequency=1	major_base=A	major_cov=0/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/19
RA	1335	.	NC_007793	725905	0	T	C	consensus_score=45.2	frequency=1	major_base=C	major_cov=0/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/19
RA	1336	.	NC_007793	728569	0	A	C	bias_e_value=407490	bias_p_value=0.139672	consensus_score=73.3	fisher_strand_p_value=1	frequency=2.143e-01	ks_quality_p_value=0.0312841	major_base=A	major_cov=33/0	major_frequency=7.857e-01	minor_base=C	minor_cov=9/0	new_cov=9/0	polymorphism_frequency=2.143e-01	polymorphism_score=18.3	prediction=polymorphism	ref_cov=33/0	total_cov=42/0
RA	1337	.	NC_007793	730141	0	A	G	consensus_score=50.8	frequency=1	major_base=G	major_cov=19/2	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=19/2	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=19/2
RA	1338	.	NC_007793	730913	1	.	G	consensus_score=80.1	frequency=1	major_base=G	major_cov=32/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=32/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=32/0
RA	1339	.	NC_007793	732170	0	T	G	bias_e_value=24812.9	bias_p_value=0.00850494	consensus_score=385.1	fisher_strand_p_value=0.00108698	frequency=3.242e-01	ks_quality_p_value=1	major_base=T	major_cov=180/18	major_frequency=6.758e-01	minor_base=G	minor_cov=95/0	new_cov=95/0	polymorphism_frequency=3.242e-01	polymorphism_score=85.4	prediction=polymorphism	ref_cov=180/18	total_cov=288/18
RA	1340	.	NC_007793	735122	0	T	A	bias_e_value=6.039e-05	bias_p_value=2.06994e-11	consensus_score=78.0	fisher_strand_p_value=1	frequency=6.258e-01	ks_quality_p_value=7.14585e-13	major_base=A	major_cov=97/0	major_frequency=6.258e-01	minor_base=T	minor_cov=58/0	new_cov=97/0	polymorphism_frequency=6.258e-01	polymorphism_score=141.9	prediction=polymorphism	ref_cov=58/0	total_cov=155/0
RA	1341	.	NC_007793	735126	0	T	A	bias_e_value=1150580	bias_p_value=0.394376	consensus_score=75.1	fisher_strand_p_value=1	frequency=6.234e-01	ks_quality_p_value=0.129582	major_base=A	major_cov=96/0	major_frequency=6.234e-01	minor_base=T	minor_cov=58/0	new_cov=96/0	polymorphism_frequency=6.234e-01	polymorphism_score=144.3	prediction=polymorphism	ref_cov=58/0	total_cov=155/0
RA	1342	.	NC_007793	735175	0	A	T	consensus_score=47.7	frequency=1	major_base=T	major_cov=27/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=27/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=27/0
RA	1343	.	NC_007793	735182	0	C	T	bias_e_value=2917370	bias_p_value=0.999965	consensus_score=17.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.991701	major_base=T	major_cov=15/0	major_frequency=9.375e-01	minor_base=C	minor_cov=1/0	new_cov=15/0	polymorphism_frequency=9.375e-01	polymorphism_score=-4.5	prediction=consensus	ref_cov=1/0	total_cov=16/0
RA	1344	.	NC_007793	735887	0	G	A	consensus_score=109.2	frequency=1	major_base=A	major_cov=41/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=41/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=41/0
RA	1345	.	NC_007793	738417	0	A	T	bias_e_value=2917470	bias_p_value=1	consensus_score=74.8	fisher_strand_p_value=1	frequency=3.951e-01	ks_quality_p_value=1	major_base=A	major_cov=49/0	major_frequency=6.049e-01	minor_base=T	minor_cov=32/0	new_cov=32/0	polymorphism_frequency=3.951e-01	polymorphism_score=41.7	prediction=polymorphism	ref_cov=49/0	total_cov=82/0
RA	1346	.	NC_007793	738423	0	T	G	bias_e_value=2917470	bias_p_value=1	consensus_score=188.9	fisher_strand_p_value=1	frequency=2.524e-01	ks_quality_p_value=1	major_base=T	major_cov=77/0	major_frequency=7.476e-01	minor_base=G	minor_cov=26/0	new_cov=26/0	polymorphism_frequency=2.524e-01	polymorphism_score=18.9	prediction=polymorphism	ref_cov=77/0	total_cov=104/0
RA	1347	.	NC_007793	739132	0	A	G	bias_e_value=2433490	bias_p_value=0.834111	consensus_score=9.2	fisher_strand_p_value=0.505291	frequency=3.929e-01	ks_quality_p_value=0.954833	major_base=A	major_cov=15/2	major_frequency=6.071e-01	minor_base=G	minor_cov=11/0	new_cov=11/0	polymorphism_frequency=3.929e-01	polymorphism_score=18.6	prediction=polymorphism	ref_cov=15/2	total_cov=26/2
RA	1348	.	NC_007793	739136	0	A	G	bias_e_value=2148500	bias_p_value=0.736425	consensus_score=14.5	fisher_strand_p_value=0.536232	frequency=3.333e-01	ks_quality_p_value=0.687289	major_base=A	major_cov=14/2	major_frequency=6.667e-01	minor_base=G	minor_cov=8/0	new_cov=8/0	polymorphism_frequency=3.333e-01	polymorphism_score=11.3	prediction=polymorphism	ref_cov=14/2	total_cov=23/2
RA	1349	.	NC_007793	740497	0	C	T	bias_e_value=1248740	bias_p_value=0.428023	consensus_score=65.5	fisher_strand_p_value=0.315366	frequency=2.093e-01	ks_quality_p_value=0.464764	major_base=C	major_cov=6/28	major_frequency=7.907e-01	minor_base=T	minor_cov=0/9	new_cov=0/9	polymorphism_frequency=2.093e-01	polymorphism_score=10.1	prediction=polymorphism	ref_cov=6/28	total_cov=6/37
RA	1350	.	NC_007793	742078	0	G	.	bias_e_value=1740480	bias_p_value=0.596574	consensus_score=27.6	fisher_strand_p_value=0.25	frequency=7.500e-01	ks_quality_p_value=1	major_base=.	major_cov=0/12	major_frequency=7.500e-01	minor_base=G	minor_cov=1/3	new_cov=0/12	polymorphism_frequency=7.500e-01	polymorphism_score=12.4	prediction=polymorphism	ref_cov=1/3	total_cov=1/15
RA	1351	.	NC_007793	747922	0	C	T	consensus_score=81.7	frequency=1	major_base=T	major_cov=28/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=28/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/1
RA	1352	.	NC_007793	748684	0	C	T	bias_e_value=2914560	bias_p_value=0.999004	consensus_score=55.7	fisher_strand_p_value=1	frequency=3.036e-01	ks_quality_p_value=0.955708	major_base=C	major_cov=37/2	major_frequency=6.964e-01	minor_base=T	minor_cov=17/0	new_cov=17/0	polymorphism_frequency=3.036e-01	polymorphism_score=13.6	prediction=polymorphism	ref_cov=37/2	total_cov=54/2
RA	1353	.	NC_007793	748914	0	T	G	consensus_score=281.3	frequency=1	major_base=G	major_cov=106/3	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=106/3	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=106/3
RA	1354	.	NC_007793	754279	1	.	A	bias_e_value=2747330	bias_p_value=0.941684	consensus_score=33.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.678534	major_base=A	major_cov=10/3	major_frequency=8.125e-01	minor_base=.	minor_cov=2/1	new_cov=10/3	polymorphism_frequency=8.125e-01	polymorphism_score=3.4	prediction=consensus	ref_cov=2/1	total_cov=12/4
RA	1355	.	NC_007793	757384	0	C	T	consensus_score=22.2	frequency=1	major_base=T	major_cov=8/2	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=8/2	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=8/2
RA	1356	.	NC_007793	757599	0	T	C	consensus_score=42.7	frequency=1	major_base=C	major_cov=14/4	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=14/4	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=14/4
RA	1357	.	NC_007793	759621	0	C	G	consensus_score=52.6	frequency=1	major_base=G	major_cov=21/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=21/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=21/0
RA	1358	.	NC_007793	769854	0	T	C	consensus_score=43.3	frequency=1	major_base=C	major_cov=1/16	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/16	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/16
RA	1359	.	NC_007793	774306	0	C	T	bias_e_value=2912620	bias_p_value=0.998336	consensus_score=84.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.942873	major_base=T	major_cov=28/4	major_frequency=9.412e-01	minor_base=A	minor_cov=2/0	new_cov=28/4	polymorphism_frequency=9.412e-01	polymorphism_score=-2.2	prediction=consensus	ref_cov=1/0	total_cov=32/4
RA	1360	.	NC_007793	779099	0	A	G	bias_e_value=2738750	bias_p_value=0.938742	consensus_score=-4.8	fisher_strand_p_value=1	frequency=5.357e-01	ks_quality_p_value=0.671057	major_base=G	major_cov=15/0	major_frequency=5.357e-01	minor_base=A	minor_cov=13/0	new_cov=15/0	polymorphism_frequency=5.357e-01	polymorphism_score=25.8	prediction=polymorphism	ref_cov=13/0	total_cov=29/0
RA	1361	.	NC_007793	779100	0	C	A	bias_e_value=2623830	bias_p_value=0.89935	consensus_score=16.3	fisher_strand_p_value=1	frequency=6.400e-01	ks_quality_p_value=0.58632	major_base=A	major_cov=16/0	major_frequency=6.400e-01	minor_base=C	minor_cov=9/0	new_cov=16/0	polymorphism_frequency=6.400e-01	polymorphism_score=20.8	prediction=polymorphism	ref_cov=9/0	total_cov=25/0
RA	1362	.	NC_007793	780361	0	A	T	consensus_score=165.5	frequency=1	major_base=T	major_cov=54/3	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=54/3	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=54/3
RA	1363	.	NC_007793	780590	0	C	G	bias_e_value=1278800	bias_p_value=0.438324	consensus_score=155.8	fisher_strand_p_value=1	frequency=2.250e-01	ks_quality_p_value=0.151987	major_base=C	major_cov=59/3	major_frequency=7.750e-01	minor_base=G	minor_cov=18/0	new_cov=18/0	polymorphism_frequency=2.250e-01	polymorphism_score=41.8	prediction=polymorphism	ref_cov=59/3	total_cov=77/3
RA	1364	.	NC_007793	782354	0	A	.	bias_e_value=2917330	bias_p_value=0.999952	consensus_score=147.9	fisher_strand_p_value=1	frequency=2.500e-01	ks_quality_p_value=0.990244	major_base=A	major_cov=49/2	major_frequency=7.500e-01	minor_base=.	minor_cov=17/0	new_cov=17/0	polymorphism_frequency=2.500e-01	polymorphism_score=46.9	prediction=polymorphism	ref_cov=49/2	total_cov=66/2
RA	1365	.	NC_007793	785958	0	C	A	consensus_score=29.4	frequency=1	major_base=A	major_cov=12/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=12/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=12/1
RA	1366	.	NC_007793	787567	0	T	C	consensus_score=45.8	frequency=1	major_base=C	major_cov=17/2	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=17/2	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=17/2
RA	1367	.	NC_007793	789781	0	T	A	consensus_score=16.1	frequency=1	major_base=A	major_cov=3/5	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=3/5	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=3/5
RA	1368	.	NC_007793	791644	0	A	G	bias_e_value=1937500	bias_p_value=0.664102	consensus_score=75.1	fisher_strand_p_value=0.415336	frequency=2.245e-01	ks_quality_p_value=0.728146	major_base=A	major_cov=10/28	major_frequency=7.755e-01	minor_base=G	minor_cov=1/10	new_cov=1/10	polymorphism_frequency=2.245e-01	polymorphism_score=12.0	prediction=polymorphism	ref_cov=10/28	total_cov=11/39
RA	1369	.	NC_007793	796278	0	C	G	bias_e_value=2917040	bias_p_value=0.999854	consensus_score=4423.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.982953	major_base=G	major_cov=1539/31	major_frequency=9.987e-01	minor_base=T	minor_cov=2/0	new_cov=1539/31	polymorphism_frequency=9.987e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1542/31
RA	1370	.	NC_007793	800169	0	A	.	bias_e_value=2584510	bias_p_value=0.885876	consensus_score=615.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.562037	major_base=.	major_cov=155/1	major_frequency=9.936e-01	minor_base=A	minor_cov=1/0	new_cov=155/1	polymorphism_frequency=9.936e-01	polymorphism_score=-3.5	prediction=consensus	ref_cov=1/0	total_cov=156/1
RA	1371	.	NC_007793	800215	0	T	G	bias_e_value=2914870	bias_p_value=0.999107	consensus_score=59.0	fisher_strand_p_value=1	frequency=2.857e-01	ks_quality_p_value=0.958048	major_base=T	major_cov=29/1	major_frequency=7.143e-01	minor_base=G	minor_cov=12/0	new_cov=12/0	polymorphism_frequency=2.857e-01	polymorphism_score=24.2	prediction=polymorphism	ref_cov=29/1	total_cov=41/1
RA	1372	.	NC_007793	800216	0	T	A	bias_e_value=2917470	bias_p_value=0.999999	consensus_score=59.9	fisher_strand_p_value=1	frequency=2.791e-01	ks_quality_p_value=0.998875	major_base=T	major_cov=30/1	major_frequency=7.209e-01	minor_base=A	minor_cov=12/0	new_cov=12/0	polymorphism_frequency=2.791e-01	polymorphism_score=21.4	prediction=polymorphism	ref_cov=30/1	total_cov=42/1
RA	1373	.	NC_007793	800217	0	A	T	bias_e_value=2780580	bias_p_value=0.953079	consensus_score=43.4	fisher_strand_p_value=1	frequency=3.000e-01	ks_quality_p_value=0.70974	major_base=A	major_cov=27/1	major_frequency=7.000e-01	minor_base=T	minor_cov=12/0	new_cov=12/0	polymorphism_frequency=3.000e-01	polymorphism_score=25.8	prediction=polymorphism	ref_cov=27/1	total_cov=39/1
RA	1374	.	NC_007793	800221	0	T	A	bias_e_value=2917470	bias_p_value=1	consensus_score=53.5	fisher_strand_p_value=1	frequency=3.000e-01	ks_quality_p_value=1	major_base=T	major_cov=27/1	major_frequency=7.000e-01	minor_base=A	minor_cov=12/0	new_cov=12/0	polymorphism_frequency=3.000e-01	polymorphism_score=20.6	prediction=polymorphism	ref_cov=27/1	total_cov=41/1
RA	1375	.	NC_007793	805586	0	C	T	bias_e_value=742639	bias_p_value=0.254549	consensus_score=29.8	fisher_strand_p_value=1	frequency=2.812e-01	ks_quality_p_value=0.0693996	major_base=C	major_cov=23/0	major_frequency=7.188e-01	minor_base=T	minor_cov=9/0	new_cov=9/0	polymorphism_frequency=2.812e-01	polymorphism_score=13.9	prediction=polymorphism	ref_cov=23/0	total_cov=32/0
RA	1376	.	NC_007793	805587	0	G	C	bias_e_value=62678.2	bias_p_value=0.0214838	consensus_score=43.2	fisher_strand_p_value=1	frequency=2.812e-01	ks_quality_p_value=0.00318278	major_base=G	major_cov=23/0	major_frequency=7.188e-01	minor_base=C	minor_cov=9/0	new_cov=9/0	polymorphism_frequency=2.812e-01	polymorphism_score=19.1	prediction=polymorphism	ref_cov=23/0	total_cov=32/0
RA	1377	.	NC_007793	805588	0	T	G	bias_e_value=10276.2	bias_p_value=0.00352229	consensus_score=43.8	fisher_strand_p_value=1	frequency=2.812e-01	ks_quality_p_value=0.000399064	major_base=T	major_cov=23/0	major_frequency=7.188e-01	minor_base=G	minor_cov=9/0	new_cov=9/0	polymorphism_frequency=2.812e-01	polymorphism_score=18.4	prediction=polymorphism	ref_cov=23/0	total_cov=32/0
RA	1378	.	NC_007793	805592	0	T	G	bias_e_value=2550820	bias_p_value=0.874326	consensus_score=43.4	fisher_strand_p_value=1	frequency=2.812e-01	ks_quality_p_value=0.542584	major_base=T	major_cov=23/0	major_frequency=7.188e-01	minor_base=G	minor_cov=9/0	new_cov=9/0	polymorphism_frequency=2.812e-01	polymorphism_score=15.5	prediction=polymorphism	ref_cov=23/0	total_cov=32/0
RA	1379	.	NC_007793	806587	0	T	C	consensus_score=92.8	frequency=1	major_base=C	major_cov=34/4	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=34/4	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=34/4
RA	1380	.	NC_007793	807173	0	A	G	bias_e_value=101950	bias_p_value=0.0349448	consensus_score=28.2	fisher_strand_p_value=0.0285714	frequency=1	ks_quality_p_value=0.198087	major_base=G	major_cov=17/0	major_frequency=8.095e-01	minor_base=A	minor_cov=2/2	new_cov=17/0	polymorphism_frequency=8.095e-01	polymorphism_score=2.4	prediction=consensus	ref_cov=2/2	total_cov=19/2
RA	1381	.	NC_007793	814699	1	.	A	bias_e_value=2238430	bias_p_value=0.767251	consensus_score=13.5	fisher_strand_p_value=1	frequency=2.857e-01	ks_quality_p_value=0.400803	major_base=.	major_cov=10/0	major_frequency=7.143e-01	minor_base=A	minor_cov=4/0	new_cov=4/0	polymorphism_frequency=2.857e-01	polymorphism_score=11.1	prediction=polymorphism	ref_cov=10/0	total_cov=14/0
RA	1382	.	NC_007793	824939	0	G	A	bias_e_value=2917470	bias_p_value=1	consensus_score=309.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=113/2	major_frequency=9.914e-01	minor_base=T	minor_cov=1/0	new_cov=113/2	polymorphism_frequency=9.914e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=114/2
RA	1383	.	NC_007793	827290	0	T	A	consensus_score=60.9	frequency=1	major_base=A	major_cov=24/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=24/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=24/0
RA	1384	.	NC_007793	828670	0	T	G	bias_e_value=10.1848	bias_p_value=3.49096e-06	consensus_score=-2.7	fisher_strand_p_value=0.036869	frequency=6.512e-01	ks_quality_p_value=5.78755e-06	major_base=G	major_cov=28/0	major_frequency=6.512e-01	minor_base=T	minor_cov=12/3	new_cov=28/0	polymorphism_frequency=6.512e-01	polymorphism_score=25.0	prediction=polymorphism	ref_cov=12/3	total_cov=40/3
RA	1385	.	NC_007793	828677	0	G	T	bias_e_value=2153130	bias_p_value=0.738014	consensus_score=28.5	fisher_strand_p_value=0.493361	frequency=4.630e-01	ks_quality_p_value=0.750244	major_base=G	major_cov=27/2	major_frequency=5.370e-01	minor_base=T	minor_cov=25/0	new_cov=25/0	polymorphism_frequency=4.630e-01	polymorphism_score=36.2	prediction=polymorphism	ref_cov=27/2	total_cov=52/2
RA	1386	.	NC_007793	828680	0	G	T	bias_e_value=2474410	bias_p_value=0.848137	consensus_score=30.3	fisher_strand_p_value=0.502262	frequency=4.231e-01	ks_quality_p_value=1	major_base=G	major_cov=28/2	major_frequency=5.769e-01	minor_base=T	minor_cov=22/0	new_cov=22/0	polymorphism_frequency=4.231e-01	polymorphism_score=30.0	prediction=polymorphism	ref_cov=28/2	total_cov=50/2
RA	1387	.	NC_007793	828681	0	C	T	bias_e_value=2917470	bias_p_value=1	consensus_score=51.0	fisher_strand_p_value=1	frequency=2.653e-01	ks_quality_p_value=1	major_base=C	major_cov=34/2	major_frequency=7.347e-01	minor_base=T	minor_cov=13/0	new_cov=13/0	polymorphism_frequency=2.653e-01	polymorphism_score=13.7	prediction=polymorphism	ref_cov=34/2	total_cov=56/2
RA	1388	.	NC_007793	828695	0	G	C	bias_e_value=2596030	bias_p_value=0.889823	consensus_score=154.5	fisher_strand_p_value=0.568961	frequency=2.360e-01	ks_quality_p_value=1	major_base=G	major_cov=64/4	major_frequency=7.640e-01	minor_base=C	minor_cov=21/0	new_cov=21/0	polymorphism_frequency=2.360e-01	polymorphism_score=32.2	prediction=polymorphism	ref_cov=64/4	total_cov=86/4
RA	1389	.	NC_007793	828711	0	C	T	bias_e_value=2913990	bias_p_value=0.998807	consensus_score=224.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.951551	major_base=T	major_cov=78/4	major_frequency=9.880e-01	minor_base=C	minor_cov=1/0	new_cov=78/4	polymorphism_frequency=9.880e-01	polymorphism_score=-5.9	prediction=consensus	ref_cov=1/0	total_cov=81/4
RA	1390	.	NC_007793	829334	0	C	T	consensus_score=14.4	frequency=1	major_base=T	major_cov=6/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=6/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=6/1
RA	1391	.	NC_007793	830828	0	G	A	bias_e_value=1930920	bias_p_value=0.661848	consensus_score=25.0	fisher_strand_p_value=0.53602	frequency=2.857e-01	ks_quality_p_value=0.560699	major_base=G	major_cov=17/3	major_frequency=7.143e-01	minor_base=A	minor_cov=8/0	new_cov=8/0	polymorphism_frequency=2.857e-01	polymorphism_score=11.2	prediction=polymorphism	ref_cov=17/3	total_cov=25/3
RA	1392	.	NC_007793	831451	0	A	G	consensus_score=237.6	frequency=1	major_base=G	major_cov=90/2	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=90/2	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=90/2
RA	1393	.	NC_007793	835887	0	T	G	consensus_score=1721.3	frequency=1	major_base=G	major_cov=534/75	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=534/75	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=534/75
RA	1394	.	NC_007793	837108	0	G	T	bias_e_value=2603690	bias_p_value=0.892447	consensus_score=567.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.573648	major_base=T	major_cov=187/6	major_frequency=9.948e-01	minor_base=A	minor_cov=1/0	new_cov=187/6	polymorphism_frequency=9.948e-01	polymorphism_score=-5.2	prediction=consensus	ref_cov=0/0	total_cov=188/6
RA	1395	.	NC_007793	838041	0	T	.	consensus_score=13.4	frequency=1	major_base=.	major_cov=5/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=5/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=5/0
RA	1396	.	NC_007793	841048	1	.	C	bias_e_value=2917440	bias_p_value=0.999988	consensus_score=98.3	fisher_strand_p_value=1	frequency=2.273e-01	ks_quality_p_value=0.995199	major_base=.	major_cov=34/0	major_frequency=7.727e-01	minor_base=C	minor_cov=10/0	new_cov=10/0	polymorphism_frequency=2.273e-01	polymorphism_score=38.3	prediction=polymorphism	ref_cov=34/0	total_cov=44/0
RA	1397	.	NC_007793	842227	0	C	A	bias_e_value=2815000	bias_p_value=0.964878	consensus_score=2322.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.74695	major_base=A	major_cov=817/2	major_frequency=9.988e-01	minor_base=G	minor_cov=1/0	new_cov=817/2	polymorphism_frequency=9.988e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=819/2
RA	1398	.	NC_007793	849875	0	A	T	bias_e_value=971469	bias_p_value=0.332983	consensus_score=133.0	fisher_strand_p_value=1	frequency=2.581e-01	ks_quality_p_value=0.101186	major_base=A	major_cov=68/1	major_frequency=7.419e-01	minor_base=T	minor_cov=24/0	new_cov=24/0	polymorphism_frequency=2.581e-01	polymorphism_score=53.9	prediction=polymorphism	ref_cov=68/1	total_cov=92/1
RA	1399	.	NC_007793	853311	0	G	A	consensus_score=99.2	frequency=1	major_base=A	major_cov=35/2	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=35/2	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=35/2
RA	1400	.	NC_007793	856203	0	T	.	consensus_score=61.1	frequency=1	major_base=.	major_cov=2/15	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/15	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/15
RA	1401	.	NC_007793	861277	0	C	T	bias_e_value=149637	bias_p_value=0.0512901	consensus_score=52.2	fisher_strand_p_value=0.137651	frequency=3.833e-01	ks_quality_p_value=0.0652216	major_base=C	major_cov=30/7	major_frequency=6.167e-01	minor_base=T	minor_cov=22/1	new_cov=22/1	polymorphism_frequency=3.833e-01	polymorphism_score=42.4	prediction=polymorphism	ref_cov=30/7	total_cov=52/8
RA	1402	.	NC_007793	861280	0	A	T	bias_e_value=229740	bias_p_value=0.0787464	consensus_score=15.7	fisher_strand_p_value=0.102041	frequency=6.735e-01	ks_quality_p_value=0.148755	major_base=T	major_cov=33/0	major_frequency=6.735e-01	minor_base=A	minor_cov=14/2	new_cov=33/0	polymorphism_frequency=6.735e-01	polymorphism_score=31.1	prediction=polymorphism	ref_cov=14/2	total_cov=47/2
RA	1403	.	NC_007793	861284	0	T	G	bias_e_value=214927	bias_p_value=0.0736691	consensus_score=13.9	fisher_strand_p_value=0.0178571	frequency=1	ks_quality_p_value=0.782784	major_base=G	major_cov=42/0	major_frequency=8.571e-01	minor_base=T	minor_cov=5/2	new_cov=42/0	polymorphism_frequency=8.571e-01	polymorphism_score=11.9	prediction=consensus	ref_cov=5/2	total_cov=47/2
RA	1404	.	NC_007793	861286	0	A	G	bias_e_value=84319.7	bias_p_value=0.0289016	consensus_score=18.7	fisher_strand_p_value=0.25	frequency=7.500e-01	ks_quality_p_value=0.018063	major_base=G	major_cov=36/0	major_frequency=7.500e-01	minor_base=A	minor_cov=11/1	new_cov=36/0	polymorphism_frequency=7.500e-01	polymorphism_score=18.0	prediction=polymorphism	ref_cov=11/1	total_cov=47/1
RA	1405	.	NC_007793	861295	0	T	C	bias_e_value=1151950	bias_p_value=0.394845	consensus_score=11.5	fisher_strand_p_value=1	frequency=5.000e-01	ks_quality_p_value=0.129812	major_base=C	major_cov=24/0	major_frequency=5.000e-01	minor_base=T	minor_cov=23/1	new_cov=24/0	polymorphism_frequency=5.000e-01	polymorphism_score=44.9	prediction=polymorphism	ref_cov=23/1	total_cov=47/1
RA	1406	.	NC_007793	861301	0	T	C	bias_e_value=2917470	bias_p_value=1	consensus_score=26.8	fisher_strand_p_value=1	frequency=2.500e-01	ks_quality_p_value=1	major_base=T	major_cov=35/1	major_frequency=7.500e-01	minor_base=C	minor_cov=12/0	new_cov=12/0	polymorphism_frequency=2.500e-01	polymorphism_score=10.6	prediction=polymorphism	ref_cov=35/1	total_cov=47/1
RA	1407	.	NC_007793	861302	0	T	G	bias_e_value=2916950	bias_p_value=0.999821	consensus_score=29.4	fisher_strand_p_value=1	frequency=4.167e-01	ks_quality_p_value=0.981133	major_base=T	major_cov=27/1	major_frequency=5.833e-01	minor_base=G	minor_cov=20/0	new_cov=20/0	polymorphism_frequency=4.167e-01	polymorphism_score=41.0	prediction=polymorphism	ref_cov=27/1	total_cov=47/1
RA	1408	.	NC_007793	861319	0	T	C	bias_e_value=1563780	bias_p_value=0.536005	consensus_score=10.2	fisher_strand_p_value=0.276596	frequency=7.234e-01	ks_quality_p_value=0.755228	major_base=C	major_cov=34/0	major_frequency=7.234e-01	minor_base=T	minor_cov=12/1	new_cov=34/0	polymorphism_frequency=7.234e-01	polymorphism_score=17.9	prediction=polymorphism	ref_cov=12/1	total_cov=47/1
RA	1409	.	NC_007793	861320	0	T	G	bias_e_value=954630	bias_p_value=0.327212	consensus_score=6.9	fisher_strand_p_value=0.270833	frequency=7.292e-01	ks_quality_p_value=0.364359	major_base=G	major_cov=35/0	major_frequency=7.292e-01	minor_base=T	minor_cov=12/1	new_cov=35/0	polymorphism_frequency=7.292e-01	polymorphism_score=26.6	prediction=polymorphism	ref_cov=12/1	total_cov=47/1
RA	1410	.	NC_007793	861517	0	C	.	bias_e_value=2916820	bias_p_value=0.999779	consensus_score=44.2	fisher_strand_p_value=1	frequency=2.222e-01	ks_quality_p_value=0.979058	major_base=C	major_cov=19/2	major_frequency=7.778e-01	minor_base=.	minor_cov=6/0	new_cov=6/0	polymorphism_frequency=2.222e-01	polymorphism_score=16.0	prediction=polymorphism	ref_cov=19/2	total_cov=25/2
RA	1411	.	NC_007793	862125	0	T	G	consensus_score=127.6	frequency=1	major_base=G	major_cov=49/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=49/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=49/0
RA	1412	.	NC_007793	867908	0	T	C	consensus_score=85.3	frequency=1	major_base=C	major_cov=1/31	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/31	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/31
RA	1413	.	NC_007793	868112	0	T	C	bias_e_value=2185850	bias_p_value=0.749229	consensus_score=12.8	fisher_strand_p_value=0.491935	frequency=4.375e-01	ks_quality_p_value=0.775716	major_base=T	major_cov=2/16	major_frequency=5.625e-01	minor_base=C	minor_cov=0/14	new_cov=0/14	polymorphism_frequency=4.375e-01	polymorphism_score=21.1	prediction=polymorphism	ref_cov=2/16	total_cov=2/30
RA	1414	.	NC_007793	868118	0	C	A	bias_e_value=270522	bias_p_value=0.0927248	consensus_score=15.8	fisher_strand_p_value=0.141176	frequency=3.889e-01	ks_quality_p_value=0.13177	major_base=C	major_cov=4/18	major_frequency=6.111e-01	minor_base=A	minor_cov=0/14	new_cov=0/14	polymorphism_frequency=3.889e-01	polymorphism_score=32.2	prediction=polymorphism	ref_cov=4/18	total_cov=4/32
RA	1415	.	NC_007793	868119	1	.	C	bias_e_value=1159450	bias_p_value=0.397415	consensus_score=44.2	fisher_strand_p_value=0.278094	frequency=3.500e-01	ks_quality_p_value=0.47133	major_base=.	major_cov=4/22	major_frequency=6.500e-01	minor_base=C	minor_cov=0/14	new_cov=0/14	polymorphism_frequency=3.500e-01	polymorphism_score=54.2	prediction=polymorphism	ref_cov=4/22	total_cov=4/36
RA	1416	.	NC_007793	876937	0	A	C	consensus_score=40.3	frequency=1	major_base=C	major_cov=16/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=16/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=16/1
RA	1417	.	NC_007793	877041	0	G	T	consensus_score=63.0	frequency=1	major_base=T	major_cov=23/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=23/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=23/1
RA	1418	.	NC_007793	895527	0	A	.	consensus_score=106.7	frequency=1	major_base=.	major_cov=29/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/0
RA	1419	.	NC_007793	895528	0	T	G	consensus_score=71.6	frequency=1	major_base=G	major_cov=29/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/0
RA	1420	.	NC_007793	895560	0	T	C	consensus_score=48.7	frequency=1	major_base=C	major_cov=20/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=20/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=20/0
RA	1421	.	NC_007793	895570	0	G	A	consensus_score=24.6	frequency=1	major_base=A	major_cov=11/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=11/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=11/0
RA	1422	.	NC_007793	897993	0	T	A	bias_e_value=2902300	bias_p_value=0.9948	consensus_score=881.5	fisher_strand_p_value=1	frequency=2.123e-01	ks_quality_p_value=0.899771	major_base=T	major_cov=358/2	major_frequency=7.877e-01	minor_base=A	minor_cov=97/0	new_cov=97/0	polymorphism_frequency=2.123e-01	polymorphism_score=205.3	prediction=polymorphism	ref_cov=358/2	total_cov=455/2
RA	1423	.	NC_007793	897996	1	.	C	bias_e_value=2744100	bias_p_value=0.940576	consensus_score=1124.2	fisher_strand_p_value=1	frequency=2.118e-01	ks_quality_p_value=0.675694	major_base=.	major_cov=359/2	major_frequency=7.882e-01	minor_base=C	minor_cov=97/0	new_cov=97/0	polymorphism_frequency=2.118e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=359/2	total_cov=456/2
RA	1424	.	NC_007793	897998	0	A	G	bias_e_value=2917470	bias_p_value=1	consensus_score=706.8	fisher_strand_p_value=1	frequency=2.220e-01	ks_quality_p_value=1	major_base=A	major_cov=352/2	major_frequency=7.780e-01	minor_base=G	minor_cov=101/0	new_cov=101/0	polymorphism_frequency=2.220e-01	polymorphism_score=159.7	prediction=polymorphism	ref_cov=352/2	total_cov=456/2
RA	1425	.	NC_007793	900886	0	T	G	bias_e_value=2917470	bias_p_value=1	consensus_score=215.9	fisher_strand_p_value=1	frequency=2.276e-01	ks_quality_p_value=1	major_base=T	major_cov=93/2	major_frequency=7.724e-01	minor_base=G	minor_cov=28/0	new_cov=28/0	polymorphism_frequency=2.276e-01	polymorphism_score=11.3	prediction=polymorphism	ref_cov=93/2	total_cov=127/2
RA	1426	.	NC_007793	901716	0	A	.	bias_e_value=2916950	bias_p_value=0.999821	consensus_score=131.0	fisher_strand_p_value=1	frequency=4.000e-01	ks_quality_p_value=0.981133	major_base=A	major_cov=42/0	major_frequency=6.000e-01	minor_base=.	minor_cov=28/0	new_cov=28/0	polymorphism_frequency=4.000e-01	polymorphism_score=87.6	prediction=polymorphism	ref_cov=42/0	total_cov=70/0
RA	1427	.	NC_007793	901717	0	A	C	bias_e_value=2917470	bias_p_value=1	consensus_score=46.7	fisher_strand_p_value=1	frequency=5.000e-01	ks_quality_p_value=1	major_base=C	major_cov=28/0	major_frequency=5.000e-01	minor_base=.	minor_cov=28/0	new_cov=28/0	polymorphism_frequency=5.000e-01	polymorphism_score=103.8	prediction=polymorphism	ref_cov=1/0	total_cov=70/0
RA	1428	.	NC_007793	901718	0	A	.	bias_e_value=2917470	bias_p_value=1	consensus_score=117.2	fisher_strand_p_value=1	frequency=4.118e-01	ks_quality_p_value=1	major_base=A	major_cov=40/0	major_frequency=5.882e-01	minor_base=.	minor_cov=28/0	new_cov=28/0	polymorphism_frequency=4.118e-01	polymorphism_score=87.6	prediction=polymorphism	ref_cov=40/0	total_cov=70/0
RA	1429	.	NC_007793	901719	0	G	.	bias_e_value=540403	bias_p_value=0.18523	consensus_score=33.9	fisher_strand_p_value=1	frequency=6.829e-01	ks_quality_p_value=0.0452198	major_base=.	major_cov=28/0	major_frequency=6.829e-01	minor_base=T	minor_cov=13/0	new_cov=28/0	polymorphism_frequency=6.829e-01	polymorphism_score=55.2	prediction=polymorphism	ref_cov=0/0	total_cov=44/0
RA	1430	.	NC_007793	901720	0	C	.	bias_e_value=1700540	bias_p_value=0.582882	consensus_score=26.3	fisher_strand_p_value=1	frequency=6.136e-01	ks_quality_p_value=0.240262	major_base=.	major_cov=27/0	major_frequency=6.136e-01	minor_base=C	minor_cov=17/0	new_cov=27/0	polymorphism_frequency=6.136e-01	polymorphism_score=74.4	prediction=polymorphism	ref_cov=17/0	total_cov=44/0
RA	1431	.	NC_007793	901721	0	A	G	bias_e_value=2146010	bias_p_value=0.735573	consensus_score=33.1	fisher_strand_p_value=1	frequency=3.095e-01	ks_quality_p_value=0.367694	major_base=A	major_cov=29/0	major_frequency=6.905e-01	minor_base=G	minor_cov=13/0	new_cov=13/0	polymorphism_frequency=3.095e-01	polymorphism_score=21.3	prediction=polymorphism	ref_cov=29/0	total_cov=44/0
RA	1432	.	NC_007793	903330	0	A	G	consensus_score=21.4	frequency=1	major_base=G	major_cov=11/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=11/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=11/0
RA	1433	.	NC_007793	905439	0	G	A	bias_e_value=2916950	bias_p_value=0.999821	consensus_score=743.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.981155	major_base=A	major_cov=256/4	major_frequency=9.924e-01	minor_base=C	minor_cov=2/0	new_cov=256/4	polymorphism_frequency=9.924e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=259/4
RA	1434	.	NC_007793	906507	0	A	C	consensus_score=77.0	frequency=1	major_base=C	major_cov=27/3	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=27/3	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=27/3
RA	1435	.	NC_007793	918380	0	A	T	consensus_score=423.9	frequency=1	major_base=T	major_cov=134/12	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=134/12	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=134/12
RA	1436	.	NC_007793	919052	0	A	G	consensus_score=42.5	frequency=1	major_base=G	major_cov=4/14	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=4/14	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=4/14
RA	1437	.	NC_007793	921951	0	T	G	bias_e_value=73190.6	bias_p_value=0.025087	consensus_score=674.5	fisher_strand_p_value=1	frequency=3.172e-01	ks_quality_p_value=0.00381984	major_base=T	major_cov=323/2	major_frequency=6.828e-01	minor_base=G	minor_cov=151/0	new_cov=151/0	polymorphism_frequency=3.172e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=323/2	total_cov=476/2
RA	1438	.	NC_007793	922506	0	G	A	bias_e_value=3.38043e-14	bias_p_value=1.15869e-20	consensus_score=438.1	fisher_strand_p_value=0.0919725	frequency=3.622e-01	ks_quality_p_value=2.47835e-21	major_base=G	major_cov=406/6	major_frequency=6.378e-01	minor_base=A	minor_cov=234/0	new_cov=234/0	polymorphism_frequency=3.622e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=406/6	total_cov=641/6
RA	1439	.	NC_007793	923111	0	G	A	bias_e_value=1799480	bias_p_value=0.616795	consensus_score=6.1	fisher_strand_p_value=0.624061	frequency=4.576e-01	ks_quality_p_value=0.424479	major_base=G	major_cov=61/3	major_frequency=5.424e-01	minor_base=A	minor_cov=53/1	new_cov=53/1	polymorphism_frequency=4.576e-01	polymorphism_score=117.1	prediction=polymorphism	ref_cov=61/3	total_cov=114/4
RA	1440	.	NC_007793	923112	0	T	G	bias_e_value=412.936	bias_p_value=0.000141539	consensus_score=64.1	fisher_strand_p_value=0.627975	frequency=4.444e-01	ks_quality_p_value=1.82075e-05	major_base=T	major_cov=62/3	major_frequency=5.556e-01	minor_base=G	minor_cov=51/1	new_cov=51/1	polymorphism_frequency=4.444e-01	polymorphism_score=125.8	prediction=polymorphism	ref_cov=62/3	total_cov=114/4
RA	1441	.	NC_007793	930525	0	T	A	bias_e_value=2604270	bias_p_value=0.892647	consensus_score=300.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.574008	major_base=A	major_cov=10/92	major_frequency=9.903e-01	minor_base=.	minor_cov=0/1	new_cov=10/92	polymorphism_frequency=9.903e-01	polymorphism_score=-4.0	prediction=consensus	ref_cov=0/0	total_cov=10/93
RA	1442	.	NC_007793	933955	0	G	T	consensus_score=269.4	frequency=1	major_base=T	major_cov=3/96	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=3/96	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=3/96
RA	1443	.	NC_007793	934930	0	G	T	bias_e_value=2476430	bias_p_value=0.848828	consensus_score=85.2	fisher_strand_p_value=0.503268	frequency=4.444e-01	ks_quality_p_value=1	major_base=G	major_cov=93/2	major_frequency=5.556e-01	minor_base=T	minor_cov=76/0	new_cov=76/0	polymorphism_frequency=4.444e-01	polymorphism_score=111.8	prediction=polymorphism	ref_cov=93/2	total_cov=170/2
RA	1444	.	NC_007793	934931	0	A	T	bias_e_value=1485420	bias_p_value=0.509147	consensus_score=127.1	fisher_strand_p_value=1	frequency=2.449e-01	ks_quality_p_value=0.19218	major_base=A	major_cov=109/2	major_frequency=7.551e-01	minor_base=T	minor_cov=36/0	new_cov=36/0	polymorphism_frequency=2.449e-01	polymorphism_score=43.5	prediction=polymorphism	ref_cov=109/2	total_cov=170/2
RA	1445	.	NC_007793	934943	0	C	T	bias_e_value=2486830	bias_p_value=0.852393	consensus_score=73.6	fisher_strand_p_value=0.5085	frequency=4.242e-01	ks_quality_p_value=1	major_base=C	major_cov=93/2	major_frequency=5.758e-01	minor_base=T	minor_cov=70/0	new_cov=70/0	polymorphism_frequency=4.242e-01	polymorphism_score=84.1	prediction=polymorphism	ref_cov=93/2	total_cov=164/2
RA	1446	.	NC_007793	934947	0	A	T	bias_e_value=2917470	bias_p_value=1	consensus_score=233.4	fisher_strand_p_value=1	frequency=2.125e-01	ks_quality_p_value=1	major_base=A	major_cov=123/3	major_frequency=7.875e-01	minor_base=T	minor_cov=34/0	new_cov=34/0	polymorphism_frequency=2.125e-01	polymorphism_score=30.2	prediction=polymorphism	ref_cov=123/3	total_cov=163/3
RA	1447	.	NC_007793	934957	0	A	T	bias_e_value=1740700	bias_p_value=0.596649	consensus_score=51.9	fisher_strand_p_value=0.250054	frequency=4.611e-01	ks_quality_p_value=1	major_base=A	major_cov=87/3	major_frequency=5.389e-01	minor_base=T	minor_cov=77/0	new_cov=77/0	polymorphism_frequency=4.611e-01	polymorphism_score=112.2	prediction=polymorphism	ref_cov=87/3	total_cov=165/3
RA	1448	.	NC_007793	934962	0	A	T	bias_e_value=168868	bias_p_value=0.0578817	consensus_score=163.8	fisher_strand_p_value=0.560876	frequency=2.774e-01	ks_quality_p_value=0.0185408	major_base=A	major_cov=109/3	major_frequency=7.226e-01	minor_base=T	minor_cov=43/0	new_cov=43/0	polymorphism_frequency=2.774e-01	polymorphism_score=53.6	prediction=polymorphism	ref_cov=109/3	total_cov=154/3
RA	1449	.	NC_007793	934971	0	A	C	bias_e_value=1496320	bias_p_value=0.512885	consensus_score=231.0	fisher_strand_p_value=0.194454	frequency=2.468e-01	ks_quality_p_value=1	major_base=A	major_cov=109/7	major_frequency=7.532e-01	minor_base=C	minor_cov=38/0	new_cov=38/0	polymorphism_frequency=2.468e-01	polymorphism_score=16.2	prediction=polymorphism	ref_cov=109/7	total_cov=151/7
RA	1450	.	NC_007793	940252	0	G	A	consensus_score=502.3	frequency=1	major_base=A	major_cov=177/4	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=177/4	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=177/4
RA	1451	.	NC_007793	947211	0	G	A	bias_e_value=2674270	bias_p_value=0.91664	consensus_score=107.9	fisher_strand_p_value=1	frequency=2.162e-01	ks_quality_p_value=0.620539	major_base=G	major_cov=57/1	major_frequency=7.838e-01	minor_base=A	minor_cov=16/0	new_cov=16/0	polymorphism_frequency=2.162e-01	polymorphism_score=23.8	prediction=polymorphism	ref_cov=57/1	total_cov=74/1
RA	1452	.	NC_007793	947217	0	A	G	bias_e_value=1236140	bias_p_value=0.423705	consensus_score=75.5	fisher_strand_p_value=1	frequency=2.903e-01	ks_quality_p_value=0.144331	major_base=A	major_cov=43/1	major_frequency=7.097e-01	minor_base=G	minor_cov=18/0	new_cov=18/0	polymorphism_frequency=2.903e-01	polymorphism_score=27.8	prediction=polymorphism	ref_cov=43/1	total_cov=61/1
RA	1453	.	NC_007793	949006	0	T	A	bias_e_value=2917190	bias_p_value=0.999905	consensus_score=40.8	fisher_strand_p_value=1	frequency=3.143e-01	ks_quality_p_value=0.986243	major_base=T	major_cov=22/2	major_frequency=6.857e-01	minor_base=A	minor_cov=11/0	new_cov=11/0	polymorphism_frequency=3.143e-01	polymorphism_score=17.7	prediction=polymorphism	ref_cov=22/2	total_cov=33/2
RA	1454	.	NC_007793	952565	0	A	C	consensus_score=44.7	frequency=1	major_base=C	major_cov=20/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=20/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=20/0
RA	1455	.	NC_007793	954568	0	G	T	bias_e_value=1276330	bias_p_value=0.43748	consensus_score=121.8	fisher_strand_p_value=0.272087	frequency=2.143e-01	ks_quality_p_value=0.556949	major_base=G	major_cov=43/12	major_frequency=7.857e-01	minor_base=T	minor_cov=14/1	new_cov=14/1	polymorphism_frequency=2.143e-01	polymorphism_score=28.6	prediction=polymorphism	ref_cov=43/12	total_cov=57/13
RA	1456	.	NC_007793	956568	0	T	C	bias_e_value=19835.9	bias_p_value=0.00679901	consensus_score=424.2	fisher_strand_p_value=0.0420385	frequency=2.204e-01	ks_quality_p_value=0.0200154	major_base=T	major_cov=184/7	major_frequency=7.796e-01	minor_base=C	minor_cov=48/6	new_cov=48/6	polymorphism_frequency=2.204e-01	polymorphism_score=84.7	prediction=polymorphism	ref_cov=184/7	total_cov=282/14
RA	1457	.	NC_007793	961879	0	C	T	consensus_score=38.7	frequency=1	major_base=T	major_cov=14/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=14/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=14/1
RA	1458	.	NC_007793	962144	0	T	G	bias_e_value=601079	bias_p_value=0.206028	consensus_score=-2.9	fisher_strand_p_value=0.205882	frequency=4.706e-01	ks_quality_p_value=0.253046	major_base=T	major_cov=6/3	major_frequency=5.294e-01	minor_base=G	minor_cov=8/0	new_cov=8/0	polymorphism_frequency=4.706e-01	polymorphism_score=17.2	prediction=polymorphism	ref_cov=6/3	total_cov=14/3
RA	1459	.	NC_007793	967086	0	A	G	consensus_score=10.9	frequency=1	major_base=G	major_cov=7/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=7/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=7/0
RA	1460	.	NC_007793	970461	0	G	A	bias_e_value=2229400	bias_p_value=0.764154	consensus_score=13.4	fisher_strand_p_value=0.512315	frequency=3.793e-01	ks_quality_p_value=0.775755	major_base=G	major_cov=16/2	major_frequency=6.207e-01	minor_base=A	minor_cov=11/0	new_cov=11/0	polymorphism_frequency=3.793e-01	polymorphism_score=17.6	prediction=polymorphism	ref_cov=16/2	total_cov=27/2
RA	1461	.	NC_007793	973232	0	A	G	bias_e_value=2917340	bias_p_value=0.999956	consensus_score=523.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.990632	major_base=G	major_cov=184/5	major_frequency=9.947e-01	minor_base=A	minor_cov=1/0	new_cov=184/5	polymorphism_frequency=9.947e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=185/5
RA	1462	.	NC_007793	973709	0	A	.	consensus_score=98.0	frequency=1	major_base=.	major_cov=4/22	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=4/22	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=4/22
RA	1463	.	NC_007793	979291	0	G	A	consensus_score=39.9	frequency=1	major_base=A	major_cov=15/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=15/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=15/1
RA	1464	.	NC_007793	984022	0	T	G	consensus_score=15.9	frequency=1	major_base=G	major_cov=4/4	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=4/4	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=4/4
RA	1465	.	NC_007793	988363	0	A	T	bias_e_value=7.55741e-11	bias_p_value=2.5904e-17	consensus_score=768.1	fisher_strand_p_value=1	frequency=2.014e-01	ks_quality_p_value=6.03088e-19	major_base=A	major_cov=331/2	major_frequency=7.986e-01	minor_base=T	minor_cov=84/0	new_cov=84/0	polymorphism_frequency=2.014e-01	polymorphism_score=183.0	prediction=polymorphism	ref_cov=331/2	total_cov=415/2
RA	1466	.	NC_007793	988365	0	A	G	bias_e_value=4.02285e-05	bias_p_value=1.37888e-11	consensus_score=737.7	fisher_strand_p_value=1	frequency=2.038e-01	ks_quality_p_value=4.69203e-13	major_base=A	major_cov=330/2	major_frequency=7.962e-01	minor_base=G	minor_cov=85/0	new_cov=85/0	polymorphism_frequency=2.038e-01	polymorphism_score=141.2	prediction=polymorphism	ref_cov=330/2	total_cov=415/2
RA	1467	.	NC_007793	993017	0	G	C	bias_e_value=2917460	bias_p_value=0.999996	consensus_score=446.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.997102	major_base=C	major_cov=0/157	major_frequency=9.937e-01	minor_base=T	minor_cov=0/1	new_cov=0/157	polymorphism_frequency=9.937e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/158
RA	1468	.	NC_007793	1001268	0	T	C	bias_e_value=2914070	bias_p_value=0.998834	consensus_score=151.3	fisher_strand_p_value=1	frequency=2.404e-01	ks_quality_p_value=0.9521	major_base=T	major_cov=4/75	major_frequency=7.596e-01	minor_base=C	minor_cov=1/24	new_cov=1/24	polymorphism_frequency=2.404e-01	polymorphism_score=37.4	prediction=polymorphism	ref_cov=4/75	total_cov=6/124
RA	1469	.	NC_007793	1013607	0	T	A	bias_e_value=2917470	bias_p_value=1	consensus_score=243.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=89/0	major_frequency=9.889e-01	minor_base=G	minor_cov=1/0	new_cov=89/0	polymorphism_frequency=9.889e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=90/0
RA	1470	.	NC_007793	1015262	0	G	C	bias_e_value=0.000516598	bias_p_value=1.77071e-10	consensus_score=120.8	fisher_strand_p_value=5.45e-11	frequency=2.750e-01	ks_quality_p_value=0.1215	major_base=G	major_cov=45/13	major_frequency=7.250e-01	minor_base=C	minor_cov=0/22	new_cov=0/22	polymorphism_frequency=2.750e-01	polymorphism_score=52.9	prediction=polymorphism	ref_cov=45/13	total_cov=45/35
RA	1471	.	NC_007793	1022294	0	G	A	consensus_score=99.7	frequency=1	major_base=A	major_cov=10/27	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=10/27	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=10/27
RA	1472	.	NC_007793	1027238	0	C	T	consensus_score=75.1	frequency=1	major_base=T	major_cov=27/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=27/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=27/0
RA	1473	.	NC_007793	1033580	0	G	A	consensus_score=495.9	frequency=1	major_base=A	major_cov=169/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=169/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=169/1
RA	1474	.	NC_007793	1045185	0	G	A	consensus_score=96.3	frequency=1	major_base=A	major_cov=3/31	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=3/31	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=3/31
RA	1475	.	NC_007793	1046861	0	A	C	consensus_score=156.3	frequency=1	major_base=C	major_cov=1/56	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/56	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/56
RA	1476	.	NC_007793	1053748	0	T	A	bias_e_value=450025	bias_p_value=0.154252	consensus_score=1075.9	fisher_strand_p_value=0.0355734	frequency=3.273e-01	ks_quality_p_value=1	major_base=T	major_cov=10/543	major_frequency=6.727e-01	minor_base=A	minor_cov=0/269	new_cov=0/269	polymorphism_frequency=3.273e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=10/543	total_cov=10/822
RA	1477	.	NC_007793	1053752	0	C	A	bias_e_value=1131620	bias_p_value=0.387877	consensus_score=1506.2	fisher_strand_p_value=0.126421	frequency=2.336e-01	ks_quality_p_value=1	major_base=C	major_cov=9/621	major_frequency=7.664e-01	minor_base=A	minor_cov=0/192	new_cov=0/192	polymorphism_frequency=2.336e-01	polymorphism_score=210.6	prediction=polymorphism	ref_cov=9/621	total_cov=9/814
RA	1478	.	NC_007793	1053763	0	T	G	bias_e_value=1598700	bias_p_value=0.547975	consensus_score=1441.1	fisher_strand_p_value=0.216627	frequency=2.036e-01	ks_quality_p_value=1	major_base=T	major_cov=9/613	major_frequency=7.964e-01	minor_base=G	minor_cov=0/159	new_cov=0/159	polymorphism_frequency=2.036e-01	polymorphism_score=137.7	prediction=polymorphism	ref_cov=9/613	total_cov=9/796
RA	1479	.	NC_007793	1053765	0	G	A	bias_e_value=1055270	bias_p_value=0.361706	consensus_score=675.4	fisher_strand_p_value=0.114068	frequency=2.766e-01	ks_quality_p_value=1	major_base=G	major_cov=8/400	major_frequency=7.234e-01	minor_base=A	minor_cov=0/156	new_cov=0/156	polymorphism_frequency=2.766e-01	polymorphism_score=153.0	prediction=polymorphism	ref_cov=8/400	total_cov=8/565
RA	1480	.	NC_007793	1053778	0	G	A	bias_e_value=153132	bias_p_value=0.052488	consensus_score=157.2	fisher_strand_p_value=0.00986489	frequency=4.464e-01	ks_quality_p_value=0.935917	major_base=G	major_cov=8/250	major_frequency=5.536e-01	minor_base=A	minor_cov=0/208	new_cov=0/208	polymorphism_frequency=4.464e-01	polymorphism_score=284.1	prediction=polymorphism	ref_cov=8/250	total_cov=8/460
RA	1481	.	NC_007793	1053784	0	T	A	bias_e_value=230818	bias_p_value=0.0791159	consensus_score=311.8	fisher_strand_p_value=0.0152673	frequency=3.804e-01	ks_quality_p_value=1	major_base=T	major_cov=9/294	major_frequency=6.196e-01	minor_base=A	minor_cov=0/186	new_cov=0/186	polymorphism_frequency=3.804e-01	polymorphism_score=262.7	prediction=polymorphism	ref_cov=9/294	total_cov=9/493
RA	1482	.	NC_007793	1053787	0	G	A	bias_e_value=1562840	bias_p_value=0.535685	consensus_score=551.3	fisher_strand_p_value=0.208689	frequency=2.229e-01	ks_quality_p_value=1	major_base=G	major_cov=8/358	major_frequency=7.771e-01	minor_base=A	minor_cov=0/105	new_cov=0/105	polymorphism_frequency=2.229e-01	polymorphism_score=104.8	prediction=polymorphism	ref_cov=8/358	total_cov=8/466
RA	1483	.	NC_007793	1053790	0	G	A	bias_e_value=394088	bias_p_value=0.135079	consensus_score=271.3	fisher_strand_p_value=0.0299664	frequency=3.648e-01	ks_quality_p_value=1	major_base=G	major_cov=8/288	major_frequency=6.352e-01	minor_base=A	minor_cov=0/170	new_cov=0/170	polymorphism_frequency=3.648e-01	polymorphism_score=209.9	prediction=polymorphism	ref_cov=8/288	total_cov=8/466
RA	1484	.	NC_007793	1054086	1	.	C	bias_e_value=360163	bias_p_value=0.123451	consensus_score=378.4	fisher_strand_p_value=0.463343	frequency=2.407e-01	ks_quality_p_value=0.0576331	major_base=.	major_cov=10/113	major_frequency=7.593e-01	minor_base=C	minor_cov=1/38	new_cov=1/38	polymorphism_frequency=2.407e-01	polymorphism_score=146.6	prediction=polymorphism	ref_cov=10/113	total_cov=11/151
RA	1485	.	NC_007793	1054642	0	G	A	bias_e_value=2917420	bias_p_value=0.999982	consensus_score=306.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.994013	major_base=A	major_cov=10/99	major_frequency=9.909e-01	minor_base=C	minor_cov=0/1	new_cov=10/99	polymorphism_frequency=9.909e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=10/100
RA	1486	.	NC_007793	1055844	0	T	C	bias_e_value=2917330	bias_p_value=0.999952	consensus_score=3460.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.990229	major_base=C	major_cov=13/1197	major_frequency=9.983e-01	minor_base=A	minor_cov=0/2	new_cov=13/1197	polymorphism_frequency=9.983e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=13/1200
RA	1487	.	NC_007793	1058202	0	T	C	consensus_score=225.9	frequency=1	major_base=C	major_cov=1/80	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/80	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/80
RA	1488	.	NC_007793	1062485	0	C	A	bias_e_value=2917470	bias_p_value=0.999999	consensus_score=902.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.998937	major_base=A	major_cov=298/5	major_frequency=9.967e-01	minor_base=T	minor_cov=1/0	new_cov=298/5	polymorphism_frequency=9.967e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=299/5
RA	1489	.	NC_007793	1069069	1	.	G	bias_e_value=0.00258135	bias_p_value=8.8479e-10	consensus_score=2459.5	fisher_strand_p_value=1.26884e-08	frequency=2.022e-01	ks_quality_p_value=0.00278182	major_base=.	major_cov=654/80	major_frequency=7.978e-01	minor_base=G	minor_cov=186/0	new_cov=186/0	polymorphism_frequency=2.022e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=654/80	total_cov=840/80
RA	1490	.	NC_007793	1069072	0	G	C	bias_e_value=2.51891e-07	bias_p_value=8.63387e-14	consensus_score=1858.7	fisher_strand_p_value=4.60749e-08	frequency=2.132e-01	ks_quality_p_value=5.41191e-08	major_base=G	major_cov=632/69	major_frequency=7.868e-01	minor_base=C	minor_cov=190/0	new_cov=190/0	polymorphism_frequency=2.132e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=632/69	total_cov=827/70
RA	1491	.	NC_007793	1069320	0	A	G	bias_e_value=2917470	bias_p_value=1	consensus_score=2888.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.999517	major_base=G	major_cov=1064/27	major_frequency=9.982e-01	minor_base=C	minor_cov=2/0	new_cov=1064/27	polymorphism_frequency=9.982e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=1067/27
RA	1492	.	NC_007793	1069644	0	C	T	bias_e_value=801104	bias_p_value=0.274589	consensus_score=1571.8	fisher_strand_p_value=0.0770642	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=503/41	major_frequency=9.982e-01	minor_base=C	minor_cov=0/1	new_cov=503/41	polymorphism_frequency=9.982e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=503/42
RA	1493	.	NC_007793	1074815	0	G	A	consensus_score=82.5	frequency=1	major_base=A	major_cov=28/3	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=28/3	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/3
RA	1494	.	NC_007793	1078042	0	T	C	bias_e_value=2523970	bias_p_value=0.865122	consensus_score=120.4	fisher_strand_p_value=1	frequency=2.588e-01	ks_quality_p_value=0.527858	major_base=T	major_cov=60/3	major_frequency=7.412e-01	minor_base=C	minor_cov=21/1	new_cov=21/1	polymorphism_frequency=2.588e-01	polymorphism_score=34.3	prediction=polymorphism	ref_cov=60/3	total_cov=89/5
RA	1495	.	NC_007793	1089757	0	T	G	bias_e_value=558827	bias_p_value=0.191545	consensus_score=831.0	fisher_strand_p_value=0.0472742	frequency=2.192e-01	ks_quality_p_value=1	major_base=T	major_cov=360/14	major_frequency=7.808e-01	minor_base=G	minor_cov=105/0	new_cov=105/0	polymorphism_frequency=2.192e-01	polymorphism_score=65.7	prediction=polymorphism	ref_cov=360/14	total_cov=474/14
RA	1496	.	NC_007793	1089761	0	C	T	bias_e_value=1.067e-50	bias_p_value=3.65728e-57	consensus_score=408.8	fisher_strand_p_value=4.79839e-09	frequency=6.871e-01	ks_quality_p_value=5.61002e-51	major_base=T	major_cov=336/0	major_frequency=6.871e-01	minor_base=C	minor_cov=137/16	new_cov=336/0	polymorphism_frequency=6.871e-01	polymorphism_score=198.2	prediction=polymorphism	ref_cov=137/16	total_cov=478/16
RA	1497	.	NC_007793	1089763	0	G	C	bias_e_value=1.15205e-30	bias_p_value=3.94878e-37	consensus_score=374.9	fisher_strand_p_value=0.00822161	frequency=2.831e-01	ks_quality_p_value=5.37756e-37	major_base=G	major_cov=303/16	major_frequency=7.169e-01	minor_base=C	minor_cov=126/0	new_cov=126/0	polymorphism_frequency=2.831e-01	polymorphism_score=208.8	prediction=polymorphism	ref_cov=303/16	total_cov=479/16
RA	1498	.	NC_007793	1089768	0	A	T	bias_e_value=1192.21	bias_p_value=0.000408645	consensus_score=190.0	fisher_strand_p_value=3.64411e-05	frequency=4.297e-01	ks_quality_p_value=0.999416	major_base=A	major_cov=266/18	major_frequency=5.703e-01	minor_base=T	minor_cov=214/0	new_cov=214/0	polymorphism_frequency=4.297e-01	polymorphism_score=297.1	prediction=polymorphism	ref_cov=266/18	total_cov=493/19
RA	1499	.	NC_007793	1089786	0	G	A	bias_e_value=63.6226	bias_p_value=2.18075e-05	consensus_score=33.0	fisher_strand_p_value=1.51435e-06	frequency=4.823e-01	ks_quality_p_value=1	major_base=G	major_cov=199/20	major_frequency=5.177e-01	minor_base=A	minor_cov=204/0	new_cov=204/0	polymorphism_frequency=4.823e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=199/20	total_cov=408/20
RA	1500	.	NC_007793	1089789	0	T	A	bias_e_value=58871.8	bias_p_value=0.0201791	consensus_score=543.4	fisher_strand_p_value=0.0029573	frequency=2.677e-01	ks_quality_p_value=1	major_base=T	major_cov=260/19	major_frequency=7.323e-01	minor_base=A	minor_cov=102/0	new_cov=102/0	polymorphism_frequency=2.677e-01	polymorphism_score=76.5	prediction=polymorphism	ref_cov=260/19	total_cov=370/19
RA	1501	.	NC_007793	1089792	0	G	T	bias_e_value=190358	bias_p_value=0.0652476	consensus_score=648.8	fisher_strand_p_value=0.0173189	frequency=2.141e-01	ks_quality_p_value=0.69515	major_base=G	major_cov=283/18	major_frequency=7.859e-01	minor_base=T	minor_cov=82/0	new_cov=82/0	polymorphism_frequency=2.141e-01	polymorphism_score=91.5	prediction=polymorphism	ref_cov=283/18	total_cov=379/18
RA	1502	.	NC_007793	1089796	0	A	G	bias_e_value=1118930	bias_p_value=0.383527	consensus_score=528.6	fisher_strand_p_value=0.124326	frequency=2.294e-01	ks_quality_p_value=1	major_base=A	major_cov=242/10	major_frequency=7.706e-01	minor_base=G	minor_cov=75/0	new_cov=75/0	polymorphism_frequency=2.294e-01	polymorphism_score=58.6	prediction=polymorphism	ref_cov=242/10	total_cov=332/10
RA	1503	.	NC_007793	1090055	0	T	C	consensus_score=1258.7	frequency=1	major_base=C	major_cov=435/28	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=435/28	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=435/28
RA	1504	.	NC_007793	1090283	0	G	A	bias_e_value=2917270	bias_p_value=0.999933	consensus_score=1050.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.98845	major_base=A	major_cov=357/23	major_frequency=9.974e-01	minor_base=G	minor_cov=1/0	new_cov=357/23	polymorphism_frequency=9.974e-01	polymorphism_score=-6.4	prediction=consensus	ref_cov=1/0	total_cov=358/23
RA	1505	.	NC_007793	1092439	0	G	C	consensus_score=2157.1	frequency=1	major_base=C	major_cov=794/8	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=794/8	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=794/8
RA	1506	.	NC_007793	1094548	0	G	A	bias_e_value=1612110	bias_p_value=0.552573	consensus_score=-5.8	fisher_strand_p_value=1	frequency=4.583e-01	ks_quality_p_value=0.219647	major_base=G	major_cov=12/1	major_frequency=5.417e-01	minor_base=A	minor_cov=11/0	new_cov=11/0	polymorphism_frequency=4.583e-01	polymorphism_score=21.5	prediction=polymorphism	ref_cov=12/1	total_cov=23/1
RA	1507	.	NC_007793	1099776	0	G	A	consensus_score=446.0	frequency=1	major_base=A	major_cov=108/52	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=108/52	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=108/52
RA	1508	.	NC_007793	1100697	0	C	T	bias_e_value=3.65152	bias_p_value=1.2516e-06	consensus_score=492.1	fisher_strand_p_value=0.588626	frequency=2.147e-01	ks_quality_p_value=1.21849e-07	major_base=C	major_cov=5/240	major_frequency=7.853e-01	minor_base=T	minor_cov=0/67	new_cov=0/67	polymorphism_frequency=2.147e-01	polymorphism_score=114.4	prediction=polymorphism	ref_cov=5/240	total_cov=5/307
RA	1509	.	NC_007793	1100698	0	A	T	bias_e_value=2093.35	bias_p_value=0.000717522	consensus_score=589.3	fisher_strand_p_value=0.58932	frequency=2.182e-01	ks_quality_p_value=0.000114856	major_base=A	major_cov=5/235	major_frequency=7.818e-01	minor_base=T	minor_cov=0/67	new_cov=0/67	polymorphism_frequency=2.182e-01	polymorphism_score=133.7	prediction=polymorphism	ref_cov=5/235	total_cov=5/303
RA	1510	.	NC_007793	1100701	0	T	A	bias_e_value=0.0063902	bias_p_value=2.19032e-09	consensus_score=491.9	fisher_strand_p_value=1	frequency=2.271e-01	ks_quality_p_value=9.08005e-11	major_base=T	major_cov=3/225	major_frequency=7.729e-01	minor_base=A	minor_cov=0/67	new_cov=0/67	polymorphism_frequency=2.271e-01	polymorphism_score=151.2	prediction=polymorphism	ref_cov=3/225	total_cov=3/292
RA	1511	.	NC_007793	1100703	0	A	T	bias_e_value=44487.1	bias_p_value=0.0152485	consensus_score=480.9	fisher_strand_p_value=1	frequency=2.436e-01	ks_quality_p_value=0.00213253	major_base=A	major_cov=3/205	major_frequency=7.564e-01	minor_base=T	minor_cov=0/67	new_cov=0/67	polymorphism_frequency=2.436e-01	polymorphism_score=139.6	prediction=polymorphism	ref_cov=3/205	total_cov=3/272
RA	1512	.	NC_007793	1100704	0	G	T	bias_e_value=970421	bias_p_value=0.332624	consensus_score=509.1	fisher_strand_p_value=1	frequency=2.445e-01	ks_quality_p_value=0.10103	major_base=G	major_cov=3/204	major_frequency=7.555e-01	minor_base=T	minor_cov=0/67	new_cov=0/67	polymorphism_frequency=2.445e-01	polymorphism_score=148.9	prediction=polymorphism	ref_cov=3/204	total_cov=3/271
RA	1513	.	NC_007793	1100705	0	T	C	bias_e_value=2917470	bias_p_value=1	consensus_score=432.8	fisher_strand_p_value=1	frequency=2.445e-01	ks_quality_p_value=1	major_base=T	major_cov=3/204	major_frequency=7.555e-01	minor_base=C	minor_cov=0/67	new_cov=0/67	polymorphism_frequency=2.445e-01	polymorphism_score=100.4	prediction=polymorphism	ref_cov=3/204	total_cov=3/271
RA	1514	.	NC_007793	1100706	0	T	C	bias_e_value=1137.11	bias_p_value=0.000389758	consensus_score=405.2	fisher_strand_p_value=1	frequency=2.482e-01	ks_quality_p_value=3.45765e-05	major_base=T	major_cov=3/203	major_frequency=7.518e-01	minor_base=C	minor_cov=0/68	new_cov=0/68	polymorphism_frequency=2.482e-01	polymorphism_score=107.7	prediction=polymorphism	ref_cov=3/203	total_cov=3/271
RA	1515	.	NC_007793	1100707	0	G	A	bias_e_value=3.68458	bias_p_value=1.26294e-06	consensus_score=351.9	fisher_strand_p_value=0.575066	frequency=2.454e-01	ks_quality_p_value=1.2592e-07	major_base=G	major_cov=4/202	major_frequency=7.546e-01	minor_base=A	minor_cov=0/67	new_cov=0/67	polymorphism_frequency=2.454e-01	polymorphism_score=132.9	prediction=polymorphism	ref_cov=4/202	total_cov=4/269
RA	1516	.	NC_007793	1100718	0	A	C	bias_e_value=200417	bias_p_value=0.0686955	consensus_score=57.8	fisher_strand_p_value=0.128375	frequency=4.474e-01	ks_quality_p_value=0.0999033	major_base=A	major_cov=4/80	major_frequency=5.526e-01	minor_base=C	minor_cov=0/68	new_cov=0/68	polymorphism_frequency=4.474e-01	polymorphism_score=178.9	prediction=polymorphism	ref_cov=4/80	total_cov=4/148
RA	1517	.	NC_007793	1100722	0	T	A	bias_e_value=128313	bias_p_value=0.043981	consensus_score=12.4	fisher_strand_p_value=0.0146158	frequency=4.694e-01	ks_quality_p_value=0.510134	major_base=T	major_cov=7/71	major_frequency=5.306e-01	minor_base=A	minor_cov=0/69	new_cov=0/69	polymorphism_frequency=4.694e-01	polymorphism_score=171.1	prediction=polymorphism	ref_cov=7/71	total_cov=7/141
RA	1518	.	NC_007793	1100725	0	T	.	bias_e_value=13.0354	bias_p_value=4.46804e-06	consensus_score=272.8	fisher_strand_p_value=0.00254965	frequency=4.323e-01	ks_quality_p_value=0.000108864	major_base=T	major_cov=11/77	major_frequency=5.677e-01	minor_base=.	minor_cov=0/67	new_cov=0/67	polymorphism_frequency=4.323e-01	polymorphism_score=219.9	prediction=polymorphism	ref_cov=11/77	total_cov=11/145
RA	1519	.	NC_007793	1100728	0	C	G	bias_e_value=0.764614	bias_p_value=2.62081e-07	consensus_score=89.0	fisher_strand_p_value=0.00129999	frequency=4.268e-01	ks_quality_p_value=1.05526e-05	major_base=C	major_cov=12/78	major_frequency=5.732e-01	minor_base=G	minor_cov=0/67	new_cov=0/67	polymorphism_frequency=4.268e-01	polymorphism_score=182.5	prediction=polymorphism	ref_cov=12/78	total_cov=12/146
RA	1520	.	NC_007793	1100729	0	A	T	bias_e_value=82.2377	bias_p_value=2.8188e-05	consensus_score=66.2	fisher_strand_p_value=0.00122717	frequency=4.423e-01	ks_quality_p_value=0.00162625	major_base=A	major_cov=12/75	major_frequency=5.577e-01	minor_base=T	minor_cov=0/69	new_cov=0/69	polymorphism_frequency=4.423e-01	polymorphism_score=158.1	prediction=polymorphism	ref_cov=12/75	total_cov=12/146
RA	1521	.	NC_007793	1100730	0	C	G	bias_e_value=1824.59	bias_p_value=0.000625403	consensus_score=85.6	fisher_strand_p_value=0.00133151	frequency=4.241e-01	ks_quality_p_value=0.0436834	major_base=C	major_cov=12/79	major_frequency=5.759e-01	minor_base=G	minor_cov=0/67	new_cov=0/67	polymorphism_frequency=4.241e-01	polymorphism_score=187.5	prediction=polymorphism	ref_cov=12/79	total_cov=12/146
RA	1522	.	NC_007793	1100733	1	.	G	bias_e_value=876.153	bias_p_value=0.000300313	consensus_score=53.7	fisher_strand_p_value=0.00133151	frequency=4.241e-01	ks_quality_p_value=0.0195139	major_base=.	major_cov=12/79	major_frequency=5.759e-01	minor_base=G	minor_cov=0/67	new_cov=0/67	polymorphism_frequency=4.241e-01	polymorphism_score=308.5	prediction=polymorphism	ref_cov=12/79	total_cov=12/146
RA	1523	.	NC_007793	1100755	0	T	A	bias_e_value=247233	bias_p_value=0.0847423	consensus_score=258.0	fisher_strand_p_value=0.0201484	frequency=3.117e-01	ks_quality_p_value=0.825216	major_base=T	major_cov=12/147	major_frequency=6.883e-01	minor_base=A	minor_cov=0/72	new_cov=0/72	polymorphism_frequency=3.117e-01	polymorphism_score=169.6	prediction=polymorphism	ref_cov=12/147	total_cov=12/219
RA	1524	.	NC_007793	1100761	0	T	G	bias_e_value=483719	bias_p_value=0.165801	consensus_score=343.4	fisher_strand_p_value=0.0390856	frequency=2.605e-01	ks_quality_p_value=1	major_base=T	major_cov=12/147	major_frequency=7.395e-01	minor_base=G	minor_cov=0/56	new_cov=0/56	polymorphism_frequency=2.605e-01	polymorphism_score=128.3	prediction=polymorphism	ref_cov=12/147	total_cov=12/203
RA	1525	.	NC_007793	1101178	0	C	T	bias_e_value=1110280	bias_p_value=0.380562	consensus_score=124.1	fisher_strand_p_value=0.428413	frequency=3.770e-01	ks_quality_p_value=0.286891	major_base=C	major_cov=3/111	major_frequency=6.230e-01	minor_base=T	minor_cov=4/65	new_cov=4/65	polymorphism_frequency=3.770e-01	polymorphism_score=133.7	prediction=polymorphism	ref_cov=3/111	total_cov=7/176
RA	1526	.	NC_007793	1101181	0	A	T	bias_e_value=1670230	bias_p_value=0.572493	consensus_score=199.1	fisher_strand_p_value=0.246369	frequency=3.535e-01	ks_quality_p_value=0.945955	major_base=A	major_cov=3/125	major_frequency=6.465e-01	minor_base=T	minor_cov=4/66	new_cov=4/66	polymorphism_frequency=3.535e-01	polymorphism_score=161.7	prediction=polymorphism	ref_cov=3/125	total_cov=7/191
RA	1527	.	NC_007793	1101190	0	T	A	bias_e_value=2917470	bias_p_value=1	consensus_score=473.2	fisher_strand_p_value=1	frequency=6.398e-01	ks_quality_p_value=1	major_base=A	major_cov=5/297	major_frequency=6.398e-01	minor_base=T	minor_cov=3/167	new_cov=5/297	polymorphism_frequency=6.398e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=3/167	total_cov=8/464
RA	1528	.	NC_007793	1101207	0	G	A	bias_e_value=1982730	bias_p_value=0.679607	consensus_score=2613.0	fisher_strand_p_value=0.315628	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=6/1026	major_frequency=8.586e-01	minor_base=G	minor_cov=2/168	new_cov=6/1026	polymorphism_frequency=8.586e-01	polymorphism_score=240.2	prediction=consensus	ref_cov=2/168	total_cov=8/1195
RA	1529	.	NC_007793	1101217	0	G	A	bias_e_value=2101980	bias_p_value=0.720481	consensus_score=2801.3	fisher_strand_p_value=0.353262	frequency=1	ks_quality_p_value=0.999004	major_base=A	major_cov=7/1088	major_frequency=8.636e-01	minor_base=G	minor_cov=2/171	new_cov=7/1088	polymorphism_frequency=8.636e-01	polymorphism_score=244.2	prediction=consensus	ref_cov=2/171	total_cov=9/1260
RA	1530	.	NC_007793	1101223	0	A	G	bias_e_value=831988	bias_p_value=0.285175	consensus_score=2475.4	fisher_strand_p_value=0.346405	frequency=1	ks_quality_p_value=0.234516	major_base=G	major_cov=7/1087	major_frequency=8.655e-01	minor_base=A	minor_cov=2/168	new_cov=7/1087	polymorphism_frequency=8.655e-01	polymorphism_score=278.5	prediction=consensus	ref_cov=2/168	total_cov=9/1256
RA	1531	.	NC_007793	1101226	0	G	C	bias_e_value=51320.8	bias_p_value=0.0175909	consensus_score=3184.1	fisher_strand_p_value=0.346029	frequency=1	ks_quality_p_value=0.00727898	major_base=C	major_cov=7/1088	major_frequency=8.656e-01	minor_base=G	minor_cov=2/168	new_cov=7/1088	polymorphism_frequency=8.656e-01	polymorphism_score=inf	prediction=consensus	ref_cov=2/168	total_cov=9/1257
RA	1532	.	NC_007793	1101229	0	T	A	bias_e_value=2051960	bias_p_value=0.703337	consensus_score=3102.9	fisher_strand_p_value=0.351994	frequency=1	ks_quality_p_value=0.956858	major_base=A	major_cov=7/1085	major_frequency=8.639e-01	minor_base=T	minor_cov=2/170	new_cov=7/1085	polymorphism_frequency=8.639e-01	polymorphism_score=inf	prediction=consensus	ref_cov=2/170	total_cov=9/1257
RA	1533	.	NC_007793	1101232	0	A	T	bias_e_value=611254	bias_p_value=0.209515	consensus_score=2913.2	fisher_strand_p_value=0.348445	frequency=1	ks_quality_p_value=0.152915	major_base=T	major_cov=7/1088	major_frequency=8.649e-01	minor_base=A	minor_cov=2/169	new_cov=7/1088	polymorphism_frequency=8.649e-01	polymorphism_score=inf	prediction=consensus	ref_cov=2/169	total_cov=9/1257
RA	1534	.	NC_007793	1101235	0	A	T	bias_e_value=1730360	bias_p_value=0.593105	consensus_score=2925.9	fisher_strand_p_value=0.349579	frequency=1	ks_quality_p_value=0.708014	major_base=T	major_cov=7/1085	major_frequency=8.646e-01	minor_base=A	minor_cov=2/169	new_cov=7/1085	polymorphism_frequency=8.646e-01	polymorphism_score=inf	prediction=consensus	ref_cov=2/169	total_cov=9/1257
RA	1535	.	NC_007793	1101237	0	T	C	bias_e_value=1404610	bias_p_value=0.481447	consensus_score=2659.9	fisher_strand_p_value=0.346405	frequency=1	ks_quality_p_value=0.507556	major_base=C	major_cov=7/1087	major_frequency=8.655e-01	minor_base=T	minor_cov=2/168	new_cov=7/1087	polymorphism_frequency=8.655e-01	polymorphism_score=262.6	prediction=consensus	ref_cov=2/168	total_cov=9/1256
RA	1536	.	NC_007793	1101241	0	T	C	bias_e_value=2132510	bias_p_value=0.730945	consensus_score=2579.7	fisher_strand_p_value=0.363472	frequency=1	ks_quality_p_value=0.998969	major_base=C	major_cov=7/1074	major_frequency=8.607e-01	minor_base=T	minor_cov=2/173	new_cov=7/1074	polymorphism_frequency=8.607e-01	polymorphism_score=267.8	prediction=consensus	ref_cov=2/173	total_cov=9/1258
RA	1537	.	NC_007793	1101242	0	C	T	bias_e_value=2147580	bias_p_value=0.73611	consensus_score=2508.8	fisher_strand_p_value=0.368326	frequency=1	ks_quality_p_value=0.999741	major_base=T	major_cov=7/1080	major_frequency=8.593e-01	minor_base=C	minor_cov=2/176	new_cov=7/1080	polymorphism_frequency=8.593e-01	polymorphism_score=277.8	prediction=consensus	ref_cov=2/176	total_cov=9/1258
RA	1538	.	NC_007793	1101244	0	T	A	bias_e_value=2611210	bias_p_value=0.895026	consensus_score=3017.3	fisher_strand_p_value=0.625321	frequency=1	ks_quality_p_value=0.924843	major_base=A	major_cov=7/1076	major_frequency=8.561e-01	minor_base=T	minor_cov=2/180	new_cov=7/1076	polymorphism_frequency=8.561e-01	polymorphism_score=inf	prediction=consensus	ref_cov=2/180	total_cov=9/1258
RA	1539	.	NC_007793	1101245	0	G	T	bias_e_value=488475	bias_p_value=0.167431	consensus_score=3035.5	fisher_strand_p_value=0.147224	frequency=1	ks_quality_p_value=0.268906	major_base=T	major_cov=7/1080	major_frequency=8.627e-01	minor_base=G	minor_cov=3/170	new_cov=7/1080	polymorphism_frequency=8.627e-01	polymorphism_score=inf	prediction=consensus	ref_cov=3/170	total_cov=10/1258
RA	1540	.	NC_007793	1101246	0	A	T	bias_e_value=1035280	bias_p_value=0.354856	consensus_score=2935.6	fisher_strand_p_value=0.140501	frequency=1	ks_quality_p_value=0.789555	major_base=T	major_cov=7/1087	major_frequency=8.655e-01	minor_base=A	minor_cov=3/167	new_cov=7/1087	polymorphism_frequency=8.655e-01	polymorphism_score=inf	prediction=consensus	ref_cov=3/167	total_cov=10/1255
RA	1541	.	NC_007793	1101251	0	T	A	bias_e_value=1195230	bias_p_value=0.40968	consensus_score=3123.8	fisher_strand_p_value=0.138629	frequency=1	ks_quality_p_value=0.989539	major_base=A	major_cov=7/1088	major_frequency=8.663e-01	minor_base=T	minor_cov=3/166	new_cov=7/1088	polymorphism_frequency=8.663e-01	polymorphism_score=inf	prediction=consensus	ref_cov=3/166	total_cov=10/1255
RA	1542	.	NC_007793	1101256	0	T	A	bias_e_value=1195040	bias_p_value=0.409615	consensus_score=3673.3	fisher_strand_p_value=0.137146	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=8/1255	major_frequency=8.795e-01	minor_base=T	minor_cov=3/170	new_cov=8/1255	polymorphism_frequency=8.795e-01	polymorphism_score=296.6	prediction=consensus	ref_cov=3/170	total_cov=11/1427
RA	1543	.	NC_007793	1101268	0	A	T	bias_e_value=1310390	bias_p_value=0.449154	consensus_score=3600.6	fisher_strand_p_value=0.157793	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=6/1235	major_frequency=9.098e-01	minor_base=A	minor_cov=2/121	new_cov=6/1235	polymorphism_frequency=9.098e-01	polymorphism_score=227.7	prediction=consensus	ref_cov=2/121	total_cov=8/1359
RA	1544	.	NC_007793	1101274	0	G	A	bias_e_value=970788	bias_p_value=0.33275	consensus_score=3426.7	fisher_strand_p_value=0.106912	frequency=1	ks_quality_p_value=0.945491	major_base=A	major_cov=5/1258	major_frequency=9.179e-01	minor_base=G	minor_cov=2/111	new_cov=5/1258	polymorphism_frequency=9.179e-01	polymorphism_score=133.1	prediction=consensus	ref_cov=2/111	total_cov=7/1371
RA	1545	.	NC_007793	1101283	0	T	A	bias_e_value=155599	bias_p_value=0.0533336	consensus_score=4090.2	fisher_strand_p_value=0.00941359	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=5/1372	major_frequency=9.399e-01	minor_base=T	minor_cov=3/85	new_cov=5/1372	polymorphism_frequency=9.399e-01	polymorphism_score=131.4	prediction=consensus	ref_cov=3/85	total_cov=8/1457
RA	1546	.	NC_007793	1101301	0	C	T	bias_e_value=204606	bias_p_value=0.0701312	consensus_score=1411.4	fisher_strand_p_value=0.0131593	frequency=1	ks_quality_p_value=0.999714	major_base=T	major_cov=4/552	major_frequency=9.205e-01	minor_base=C	minor_cov=3/45	new_cov=4/552	polymorphism_frequency=9.205e-01	polymorphism_score=56.4	prediction=consensus	ref_cov=3/45	total_cov=7/597
RA	1547	.	NC_007793	1101304	0	T	A	bias_e_value=5.45708e-05	bias_p_value=1.87048e-11	consensus_score=1505.4	fisher_strand_p_value=6.43396e-13	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=4/515	major_frequency=8.842e-01	minor_base=T	minor_cov=16/52	new_cov=4/515	polymorphism_frequency=8.842e-01	polymorphism_score=125.4	prediction=consensus	ref_cov=16/52	total_cov=20/567
RA	1548	.	NC_007793	1101310	0	G	A	bias_e_value=4.1517e-10	bias_p_value=1.42305e-16	consensus_score=1189.7	fisher_strand_p_value=4.73991e-18	frequency=1	ks_quality_p_value=0.728578	major_base=A	major_cov=3/461	major_frequency=8.992e-01	minor_base=G	minor_cov=19/33	new_cov=3/461	polymorphism_frequency=8.992e-01	polymorphism_score=63.0	prediction=consensus	ref_cov=19/33	total_cov=22/497
RA	1549	.	NC_007793	1101316	0	A	T	bias_e_value=2.87593e-10	bias_p_value=9.85762e-17	consensus_score=1300.7	fisher_strand_p_value=3.62896e-18	frequency=1	ks_quality_p_value=0.653235	major_base=T	major_cov=3/464	major_frequency=8.895e-01	minor_base=A	minor_cov=20/38	new_cov=3/464	polymorphism_frequency=8.895e-01	polymorphism_score=111.6	prediction=consensus	ref_cov=20/38	total_cov=23/504
RA	1550	.	NC_007793	1101318	0	G	A	bias_e_value=3.64332e-10	bias_p_value=1.24879e-16	consensus_score=1212.5	fisher_strand_p_value=7.53583e-18	frequency=1	ks_quality_p_value=0.400847	major_base=A	major_cov=3/464	major_frequency=8.861e-01	minor_base=G	minor_cov=20/40	new_cov=3/464	polymorphism_frequency=8.861e-01	polymorphism_score=78.8	prediction=consensus	ref_cov=20/40	total_cov=23/505
RA	1551	.	NC_007793	1101319	0	T	C	bias_e_value=2.28095e-08	bias_p_value=7.81823e-15	consensus_score=1155.5	fisher_strand_p_value=2.84911e-16	frequency=1	ks_quality_p_value=0.739733	major_base=C	major_cov=4/465	major_frequency=8.883e-01	minor_base=T	minor_cov=19/40	new_cov=4/465	polymorphism_frequency=8.883e-01	polymorphism_score=85.4	prediction=consensus	ref_cov=19/40	total_cov=23/505
RA	1552	.	NC_007793	1101321	0	A	G	bias_e_value=7.46806e-10	bias_p_value=2.55977e-16	consensus_score=1081.0	fisher_strand_p_value=7.25387e-18	frequency=1	ks_quality_p_value=0.869058	major_base=G	major_cov=3/465	major_frequency=8.864e-01	minor_base=A	minor_cov=20/40	new_cov=3/465	polymorphism_frequency=8.864e-01	polymorphism_score=91.4	prediction=consensus	ref_cov=20/40	total_cov=23/505
RA	1553	.	NC_007793	1101325	0	T	A	bias_e_value=9.73586e-11	bias_p_value=3.33709e-17	consensus_score=1355.1	fisher_strand_p_value=2.84704e-17	frequency=1	ks_quality_p_value=0.0274548	major_base=A	major_cov=3/465	major_frequency=8.797e-01	minor_base=T	minor_cov=20/44	new_cov=3/465	polymorphism_frequency=8.797e-01	polymorphism_score=117.8	prediction=consensus	ref_cov=20/44	total_cov=23/509
RA	1554	.	NC_007793	1101328	0	T	A	bias_e_value=1.84268e-12	bias_p_value=6.31601e-19	consensus_score=1300.3	fisher_strand_p_value=8.73242e-17	frequency=1	ks_quality_p_value=0.00015471	major_base=A	major_cov=3/465	major_frequency=8.619e-01	minor_base=T	minor_cov=21/54	new_cov=3/465	polymorphism_frequency=8.619e-01	polymorphism_score=147.4	prediction=consensus	ref_cov=21/54	total_cov=24/519
RA	1555	.	NC_007793	1101334	0	A	G	bias_e_value=2.90821e-12	bias_p_value=9.96828e-19	consensus_score=1035.2	fisher_strand_p_value=3.25578e-17	frequency=1	ks_quality_p_value=0.000661499	major_base=G	major_cov=3/465	major_frequency=8.556e-01	minor_base=A	minor_cov=22/57	new_cov=3/465	polymorphism_frequency=8.556e-01	polymorphism_score=124.9	prediction=consensus	ref_cov=22/57	total_cov=25/522
RA	1556	.	NC_007793	1101337	0	T	A	bias_e_value=2.43377e-07	bias_p_value=8.34205e-14	consensus_score=793.5	fisher_strand_p_value=1.39401e-14	frequency=7.942e-01	ks_quality_p_value=0.172653	major_base=A	major_cov=2/326	major_frequency=7.942e-01	minor_base=T	minor_cov=22/63	new_cov=2/326	polymorphism_frequency=7.942e-01	polymorphism_score=182.4	prediction=polymorphism	ref_cov=22/63	total_cov=24/391
RA	1557	.	NC_007793	1101340	0	A	G	bias_e_value=1.08426e-07	bias_p_value=3.71646e-14	consensus_score=597.7	fisher_strand_p_value=2.0081e-15	frequency=7.819e-01	ks_quality_p_value=0.521441	major_base=G	major_cov=2/317	major_frequency=7.819e-01	minor_base=A	minor_cov=24/65	new_cov=2/317	polymorphism_frequency=7.819e-01	polymorphism_score=165.4	prediction=polymorphism	ref_cov=24/65	total_cov=26/383
RA	1558	.	NC_007793	1101343	0	A	T	bias_e_value=2.05829e-05	bias_p_value=7.05505e-12	consensus_score=591.8	fisher_strand_p_value=6.16166e-13	frequency=7.437e-01	ks_quality_p_value=0.380634	major_base=T	major_cov=2/291	major_frequency=7.437e-01	minor_base=A	minor_cov=23/78	new_cov=2/291	polymorphism_frequency=7.437e-01	polymorphism_score=235.6	prediction=polymorphism	ref_cov=23/78	total_cov=25/369
RA	1559	.	NC_007793	1101345	0	G	A	bias_e_value=1.70489e-05	bias_p_value=5.84372e-12	consensus_score=580.2	fisher_strand_p_value=1.97437e-13	frequency=7.406e-01	ks_quality_p_value=0.977603	major_base=A	major_cov=2/292	major_frequency=7.406e-01	minor_base=G	minor_cov=24/79	new_cov=2/292	polymorphism_frequency=7.406e-01	polymorphism_score=182.4	prediction=polymorphism	ref_cov=24/79	total_cov=26/371
RA	1560	.	NC_007793	1101346	0	A	G	bias_e_value=1.36835e-05	bias_p_value=4.69021e-12	consensus_score=488.5	fisher_strand_p_value=1.72217e-13	frequency=7.418e-01	ks_quality_p_value=0.892826	major_base=G	major_cov=2/291	major_frequency=7.418e-01	minor_base=A	minor_cov=24/78	new_cov=2/291	polymorphism_frequency=7.418e-01	polymorphism_score=200.4	prediction=polymorphism	ref_cov=24/78	total_cov=26/373
RA	1561	.	NC_007793	1101357	0	G	A	bias_e_value=4.44185e-17	bias_p_value=1.5225e-23	consensus_score=613.8	fisher_strand_p_value=3.52427e-13	frequency=7.000e-01	ks_quality_p_value=7.50106e-13	major_base=A	major_cov=1/342	major_frequency=7.000e-01	minor_base=G	minor_cov=25/122	new_cov=1/342	polymorphism_frequency=7.000e-01	polymorphism_score=267.4	prediction=polymorphism	ref_cov=25/122	total_cov=26/465
RA	1562	.	NC_007793	1101361	0	A	G	bias_e_value=1.27865e-17	bias_p_value=4.38275e-24	consensus_score=633.4	fisher_strand_p_value=3.03649e-14	frequency=7.276e-01	ks_quality_p_value=2.45221e-12	major_base=G	major_cov=1/389	major_frequency=7.276e-01	minor_base=A	minor_cov=25/121	new_cov=1/389	polymorphism_frequency=7.276e-01	polymorphism_score=285.6	prediction=polymorphism	ref_cov=25/121	total_cov=26/511
RA	1563	.	NC_007793	1101376	0	G	T	bias_e_value=5.83576e-14	bias_p_value=2.00028e-20	consensus_score=22.5	fisher_strand_p_value=3.32961e-13	frequency=4.887e-01	ks_quality_p_value=1.19492e-09	major_base=G	major_cov=43/116	major_frequency=5.113e-01	minor_base=T	minor_cov=1/151	new_cov=1/151	polymorphism_frequency=4.887e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=43/116	total_cov=44/268
RA	1564	.	NC_007793	1101379	0	G	T	bias_e_value=0.000850878	bias_p_value=2.91649e-10	consensus_score=110.7	fisher_strand_p_value=1.14104e-11	frequency=4.386e-01	ks_quality_p_value=0.974745	major_base=G	major_cov=44/116	major_frequency=5.614e-01	minor_base=T	minor_cov=1/124	new_cov=1/124	polymorphism_frequency=4.386e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=44/116	total_cov=45/241
RA	1565	.	NC_007793	1101382	0	A	T	bias_e_value=2.73687e-11	bias_p_value=9.38096e-18	consensus_score=111.3	fisher_strand_p_value=3.61397e-13	frequency=4.421e-01	ks_quality_p_value=5.90052e-07	major_base=A	major_cov=49/110	major_frequency=5.579e-01	minor_base=T	minor_cov=1/125	new_cov=1/125	polymorphism_frequency=4.421e-01	polymorphism_score=289.3	prediction=polymorphism	ref_cov=49/110	total_cov=50/240
RA	1566	.	NC_007793	1101391	0	T	G	bias_e_value=2.11469e-10	bias_p_value=7.24837e-17	consensus_score=179.9	fisher_strand_p_value=2.32888e-15	frequency=3.987e-01	ks_quality_p_value=0.000742843	major_base=T	major_cov=64/123	major_frequency=6.013e-01	minor_base=G	minor_cov=1/123	new_cov=1/123	polymorphism_frequency=3.987e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=64/123	total_cov=66/248
RA	1567	.	NC_007793	1101397	0	T	A	bias_e_value=4.02819e-08	bias_p_value=1.38071e-14	consensus_score=182.0	fisher_strand_p_value=8.44365e-16	frequency=4.026e-01	ks_quality_p_value=0.447865	major_base=T	major_cov=64/120	major_frequency=5.974e-01	minor_base=A	minor_cov=1/123	new_cov=1/123	polymorphism_frequency=4.026e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=64/120	total_cov=65/244
RA	1568	.	NC_007793	1101403	0	G	A	bias_e_value=1.43811e-06	bias_p_value=4.9293e-13	consensus_score=78.9	fisher_strand_p_value=6.62026e-13	frequency=4.281e-01	ks_quality_p_value=0.02268	major_base=G	major_cov=50/117	major_frequency=5.719e-01	minor_base=A	minor_cov=1/124	new_cov=1/124	polymorphism_frequency=4.281e-01	polymorphism_score=279.2	prediction=polymorphism	ref_cov=50/117	total_cov=51/241
RA	1569	.	NC_007793	1101409	0	G	A	bias_e_value=1.85653e-09	bias_p_value=6.36351e-16	consensus_score=27.3	fisher_strand_p_value=2.29947e-13	frequency=4.496e-01	ks_quality_p_value=6.97576e-05	major_base=G	major_cov=48/105	major_frequency=5.504e-01	minor_base=A	minor_cov=1/124	new_cov=1/124	polymorphism_frequency=4.496e-01	polymorphism_score=282.3	prediction=polymorphism	ref_cov=48/105	total_cov=49/229
RA	1570	.	NC_007793	1101427	0	A	T	bias_e_value=4.8948e-11	bias_p_value=1.67776e-17	consensus_score=78.3	fisher_strand_p_value=2.20162e-13	frequency=4.642e-01	ks_quality_p_value=1.75602e-06	major_base=A	major_cov=46/96	major_frequency=5.358e-01	minor_base=T	minor_cov=1/122	new_cov=1/122	polymorphism_frequency=4.642e-01	polymorphism_score=295.7	prediction=polymorphism	ref_cov=46/96	total_cov=47/221
RA	1571	.	NC_007793	1101430	0	G	A	bias_e_value=2.89985e-07	bias_p_value=9.93962e-14	consensus_score=-2.1	fisher_strand_p_value=1.30896e-13	frequency=4.753e-01	ks_quality_p_value=0.022023	major_base=G	major_cov=45/93	major_frequency=5.247e-01	minor_base=A	minor_cov=1/124	new_cov=1/124	polymorphism_frequency=4.753e-01	polymorphism_score=285.5	prediction=polymorphism	ref_cov=45/93	total_cov=46/217
RA	1572	.	NC_007793	1101433	0	T	A	bias_e_value=7.50011e-08	bias_p_value=2.57076e-14	consensus_score=18.2	fisher_strand_p_value=5.01626e-13	frequency=4.825e-01	ks_quality_p_value=0.00142865	major_base=T	major_cov=43/90	major_frequency=5.175e-01	minor_base=A	minor_cov=1/123	new_cov=1/123	polymorphism_frequency=4.825e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=43/90	total_cov=44/215
RA	1573	.	NC_007793	1101435	0	A	G	bias_e_value=3.83294e-05	bias_p_value=1.31379e-11	consensus_score=48.9	fisher_strand_p_value=5.20329e-13	frequency=4.826e-01	ks_quality_p_value=0.857713	major_base=A	major_cov=43/91	major_frequency=5.174e-01	minor_base=G	minor_cov=1/124	new_cov=1/124	polymorphism_frequency=4.826e-01	polymorphism_score=248.7	prediction=polymorphism	ref_cov=43/91	total_cov=44/215
RA	1574	.	NC_007793	1101436	0	T	C	bias_e_value=4.10846e-06	bias_p_value=1.40823e-12	consensus_score=45.7	fisher_strand_p_value=5.20329e-13	frequency=4.826e-01	ks_quality_p_value=0.0852511	major_base=T	major_cov=43/91	major_frequency=5.174e-01	minor_base=C	minor_cov=1/124	new_cov=1/124	polymorphism_frequency=4.826e-01	polymorphism_score=261.4	prediction=polymorphism	ref_cov=43/91	total_cov=44/215
RA	1575	.	NC_007793	1101439	0	C	T	bias_e_value=2.19404e-09	bias_p_value=7.52036e-16	consensus_score=18.5	fisher_strand_p_value=7.34637e-14	frequency=5.000e-01	ks_quality_p_value=0.00025916	major_base=T	major_cov=1/123	major_frequency=5.000e-01	minor_base=C	minor_cov=43/81	new_cov=1/123	polymorphism_frequency=5.000e-01	polymorphism_score=260.7	prediction=polymorphism	ref_cov=43/81	total_cov=44/205
RA	1576	.	NC_007793	1101442	0	A	C	bias_e_value=1.72385e-05	bias_p_value=5.90873e-12	consensus_score=57.9	fisher_strand_p_value=2.01482e-13	frequency=4.960e-01	ks_quality_p_value=0.968999	major_base=A	major_cov=42/84	major_frequency=5.040e-01	minor_base=C	minor_cov=1/123	new_cov=1/123	polymorphism_frequency=4.960e-01	polymorphism_score=297.9	prediction=polymorphism	ref_cov=42/84	total_cov=43/208
RA	1577	.	NC_007793	1101448	0	A	T	bias_e_value=7.00069e-06	bias_p_value=2.39957e-12	consensus_score=18.5	fisher_strand_p_value=7.69193e-14	frequency=4.847e-01	ks_quality_p_value=1	major_base=A	major_cov=41/43	major_frequency=5.153e-01	minor_base=T	minor_cov=1/78	new_cov=1/78	polymorphism_frequency=4.847e-01	polymorphism_score=193.9	prediction=polymorphism	ref_cov=41/43	total_cov=42/121
RA	1578	.	NC_007793	1111040	0	A	T	bias_e_value=92499.2	bias_p_value=0.0317053	consensus_score=530.6	fisher_strand_p_value=0.00504036	frequency=6.503e-01	ks_quality_p_value=1	major_base=T	major_cov=331/0	major_frequency=6.503e-01	minor_base=A	minor_cov=173/5	new_cov=331/0	polymorphism_frequency=6.503e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=173/5	total_cov=509/5
RA	1579	.	NC_007793	1112481	0	C	A	consensus_score=87.1	frequency=1	major_base=A	major_cov=14/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=14/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=14/19
RA	1580	.	NC_007793	1113117	1	.	C	bias_e_value=422298	bias_p_value=0.144748	consensus_score=64.5	fisher_strand_p_value=0.297383	frequency=3.023e-01	ks_quality_p_value=0.110158	major_base=.	major_cov=4/26	major_frequency=6.977e-01	minor_base=C	minor_cov=0/13	new_cov=0/13	polymorphism_frequency=3.023e-01	polymorphism_score=49.5	prediction=polymorphism	ref_cov=4/26	total_cov=4/39
RA	1581	.	NC_007793	1113988	0	G	A	bias_e_value=332059	bias_p_value=0.113818	consensus_score=216.6	fisher_strand_p_value=0.0246914	frequency=1	ks_quality_p_value=0.97531	major_base=A	major_cov=79/1	major_frequency=9.877e-01	minor_base=G	minor_cov=0/1	new_cov=79/1	polymorphism_frequency=9.877e-01	polymorphism_score=-5.7	prediction=consensus	ref_cov=0/1	total_cov=79/2
RA	1582	.	NC_007793	1115164	0	A	G	bias_e_value=2917430	bias_p_value=0.999987	consensus_score=1270.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.994939	major_base=G	major_cov=463/13	major_frequency=9.979e-01	minor_base=T	minor_cov=1/0	new_cov=463/13	polymorphism_frequency=9.979e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=464/13
RA	1583	.	NC_007793	1116591	0	T	G	consensus_score=119.6	frequency=1	major_base=G	major_cov=27/22	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=27/22	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=27/22
RA	1584	.	NC_007793	1126127	0	A	G	bias_e_value=146259	bias_p_value=0.0501322	consensus_score=1011.5	fisher_strand_p_value=0.00873281	frequency=2.798e-01	ks_quality_p_value=1	major_base=A	major_cov=589/16	major_frequency=7.202e-01	minor_base=G	minor_cov=235/0	new_cov=235/0	polymorphism_frequency=2.798e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=589/16	total_cov=826/16
RA	1585	.	NC_007793	1126130	0	G	C	bias_e_value=1775.33	bias_p_value=0.000608517	consensus_score=1557.2	fisher_strand_p_value=0.0296966	frequency=2.221e-01	ks_quality_p_value=0.00190042	major_base=G	major_cov=569/16	major_frequency=7.779e-01	minor_base=C	minor_cov=167/0	new_cov=167/0	polymorphism_frequency=2.221e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=569/16	total_cov=741/16
RA	1586	.	NC_007793	1126132	0	A	G	bias_e_value=233641	bias_p_value=0.0800836	consensus_score=942.3	fisher_strand_p_value=0.0162406	frequency=2.489e-01	ks_quality_p_value=0.954347	major_base=A	major_cov=479/16	major_frequency=7.511e-01	minor_base=G	minor_cov=164/0	new_cov=164/0	polymorphism_frequency=2.489e-01	polymorphism_score=274.3	prediction=polymorphism	ref_cov=479/16	total_cov=644/16
RA	1587	.	NC_007793	1129043	0	T	.	bias_e_value=2.7738e-06	bias_p_value=9.50756e-13	consensus_score=513.1	fisher_strand_p_value=0.300985	frequency=3.492e-01	ks_quality_p_value=9.82463e-14	major_base=T	major_cov=160/4	major_frequency=6.508e-01	minor_base=.	minor_cov=88/0	new_cov=88/0	polymorphism_frequency=3.492e-01	polymorphism_score=275.9	prediction=polymorphism	ref_cov=160/4	total_cov=259/4
RA	1588	.	NC_007793	1134908	0	A	G	bias_e_value=2917300	bias_p_value=0.999941	consensus_score=571.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.989136	major_base=G	major_cov=207/9	major_frequency=9.954e-01	minor_base=A	minor_cov=1/0	new_cov=207/9	polymorphism_frequency=9.954e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=208/9
RA	1589	.	NC_007793	1136229	0	A	G	consensus_score=102.7	frequency=1	major_base=G	major_cov=5/36	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=5/36	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=5/36
RA	1590	.	NC_007793	1140030	0	C	T	consensus_score=334.7	frequency=1	major_base=T	major_cov=115/2	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=115/2	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=115/2
RA	1591	.	NC_007793	1143651	0	T	C	consensus_score=39.8	frequency=1	major_base=C	major_cov=17/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=17/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=17/0
RA	1592	.	NC_007793	1146254	0	G	C	bias_e_value=2917470	bias_p_value=1	consensus_score=-6.0	fisher_strand_p_value=1	frequency=5.000e-01	ks_quality_p_value=1	major_base=C	major_cov=6/0	major_frequency=5.000e-01	minor_base=G	minor_cov=6/0	new_cov=6/0	polymorphism_frequency=5.000e-01	polymorphism_score=12.8	prediction=polymorphism	ref_cov=6/0	total_cov=12/0
RA	1593	.	NC_007793	1146256	0	T	G	bias_e_value=1627440	bias_p_value=0.557825	consensus_score=-6.1	fisher_strand_p_value=1	frequency=5.000e-01	ks_quality_p_value=0.22313	major_base=T	major_cov=6/0	major_frequency=5.000e-01	minor_base=G	minor_cov=6/0	new_cov=6/0	polymorphism_frequency=5.000e-01	polymorphism_score=10.5	prediction=polymorphism	ref_cov=6/0	total_cov=12/0
RA	1594	.	NC_007793	1148618	0	G	A	bias_e_value=668246	bias_p_value=0.22905	consensus_score=105.1	fisher_strand_p_value=1	frequency=2.368e-01	ks_quality_p_value=0.0600872	major_base=G	major_cov=58/0	major_frequency=7.632e-01	minor_base=A	minor_cov=18/0	new_cov=18/0	polymorphism_frequency=2.368e-01	polymorphism_score=29.4	prediction=polymorphism	ref_cov=58/0	total_cov=79/0
RA	1595	.	NC_007793	1148621	0	A	T	bias_e_value=2912720	bias_p_value=0.998371	consensus_score=67.1	fisher_strand_p_value=1	frequency=3.506e-01	ks_quality_p_value=0.94346	major_base=A	major_cov=50/0	major_frequency=6.494e-01	minor_base=T	minor_cov=27/0	new_cov=27/0	polymorphism_frequency=3.506e-01	polymorphism_score=62.3	prediction=polymorphism	ref_cov=50/0	total_cov=77/0
RA	1596	.	NC_007793	1148627	1	.	A	bias_e_value=520185	bias_p_value=0.1783	consensus_score=101.8	fisher_strand_p_value=1	frequency=2.949e-01	ks_quality_p_value=0.0429994	major_base=.	major_cov=54/1	major_frequency=7.051e-01	minor_base=A	minor_cov=23/0	new_cov=23/0	polymorphism_frequency=2.949e-01	polymorphism_score=85.9	prediction=polymorphism	ref_cov=54/1	total_cov=77/1
RA	1597	.	NC_007793	1148648	0	T	G	bias_e_value=1649690	bias_p_value=0.565452	consensus_score=87.5	fisher_strand_p_value=1	frequency=2.245e-01	ks_quality_p_value=0.228254	major_base=T	major_cov=35/3	major_frequency=7.755e-01	minor_base=G	minor_cov=11/0	new_cov=11/0	polymorphism_frequency=2.245e-01	polymorphism_score=22.8	prediction=polymorphism	ref_cov=35/3	total_cov=47/3
RA	1598	.	NC_007793	1153368	0	A	G	consensus_score=1086.9	frequency=1	major_base=G	major_cov=400/2	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=400/2	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=400/2
RA	1599	.	NC_007793	1154397	0	C	G	consensus_score=29.6	frequency=1	major_base=G	major_cov=3/10	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=3/10	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=3/10
RA	1600	.	NC_007793	1154522	0	A	C	consensus_score=150.9	frequency=1	major_base=C	major_cov=1/60	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/60	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/60
RA	1601	.	NC_007793	1154550	0	C	T	bias_e_value=1701280	bias_p_value=0.583135	consensus_score=179.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.240439	major_base=T	major_cov=1/86	major_frequency=9.355e-01	minor_base=C	minor_cov=0/6	new_cov=1/86	polymorphism_frequency=9.355e-01	polymorphism_score=1.6	prediction=consensus	ref_cov=0/6	total_cov=1/92
RA	1602	.	NC_007793	1154556	0	A	G	bias_e_value=2049960	bias_p_value=0.70265	consensus_score=154.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.336177	major_base=G	major_cov=1/79	major_frequency=9.302e-01	minor_base=A	minor_cov=0/6	new_cov=1/79	polymorphism_frequency=9.302e-01	polymorphism_score=3.5	prediction=consensus	ref_cov=0/6	total_cov=1/85
RA	1603	.	NC_007793	1154571	0	C	G	bias_e_value=1392290	bias_p_value=0.477224	consensus_score=113.0	fisher_strand_p_value=0.181414	frequency=1	ks_quality_p_value=0.955826	major_base=G	major_cov=1/66	major_frequency=9.054e-01	minor_base=C	minor_cov=1/6	new_cov=1/66	polymorphism_frequency=9.054e-01	polymorphism_score=8.8	prediction=consensus	ref_cov=1/6	total_cov=2/72
RA	1604	.	NC_007793	1154573	0	G	T	bias_e_value=1192950	bias_p_value=0.408898	consensus_score=108.3	fisher_strand_p_value=0.181414	frequency=1	ks_quality_p_value=0.753993	major_base=T	major_cov=1/66	major_frequency=9.054e-01	minor_base=G	minor_cov=1/6	new_cov=1/66	polymorphism_frequency=9.054e-01	polymorphism_score=8.5	prediction=consensus	ref_cov=1/6	total_cov=2/72
RA	1605	.	NC_007793	1154577	0	C	G	bias_e_value=1417730	bias_p_value=0.485944	consensus_score=111.9	fisher_strand_p_value=0.181414	frequency=1	ks_quality_p_value=0.983484	major_base=G	major_cov=1/66	major_frequency=9.054e-01	minor_base=C	minor_cov=1/6	new_cov=1/66	polymorphism_frequency=9.054e-01	polymorphism_score=8.8	prediction=consensus	ref_cov=1/6	total_cov=2/72
RA	1606	.	NC_007793	1154583	0	T	C	bias_e_value=1747240	bias_p_value=0.59889	consensus_score=117.3	fisher_strand_p_value=0.251675	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=2/68	major_frequency=9.091e-01	minor_base=T	minor_cov=1/6	new_cov=2/68	polymorphism_frequency=9.091e-01	polymorphism_score=5.0	prediction=consensus	ref_cov=1/6	total_cov=3/74
RA	1607	.	NC_007793	1154585	0	T	C	bias_e_value=1444560	bias_p_value=0.495141	consensus_score=119.8	fisher_strand_p_value=0.251675	frequency=1	ks_quality_p_value=0.73031	major_base=C	major_cov=2/68	major_frequency=9.091e-01	minor_base=T	minor_cov=1/6	new_cov=2/68	polymorphism_frequency=9.091e-01	polymorphism_score=2.8	prediction=consensus	ref_cov=1/6	total_cov=3/74
RA	1608	.	NC_007793	1154607	0	T	A	bias_e_value=1816030	bias_p_value=0.622468	consensus_score=77.1	fisher_strand_p_value=0.31543	frequency=1	ks_quality_p_value=0.853431	major_base=A	major_cov=2/51	major_frequency=8.833e-01	minor_base=T	minor_cov=1/6	new_cov=2/51	polymorphism_frequency=8.833e-01	polymorphism_score=8.4	prediction=consensus	ref_cov=1/6	total_cov=3/57
RA	1609	.	NC_007793	1158763	0	T	C	consensus_score=26.4	frequency=1	major_base=C	major_cov=2/10	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/10	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/10
RA	1610	.	NC_007793	1165923	0	T	G	bias_e_value=2916660	bias_p_value=0.999724	consensus_score=742.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.976595	major_base=G	major_cov=260/6	major_frequency=9.963e-01	minor_base=.	minor_cov=1/0	new_cov=260/6	polymorphism_frequency=9.963e-01	polymorphism_score=-4.3	prediction=consensus	ref_cov=0/0	total_cov=261/6
RA	1611	.	NC_007793	1167368	0	T	A	bias_e_value=171140	bias_p_value=0.0586604	consensus_score=202.8	fisher_strand_p_value=1	frequency=2.124e-01	ks_quality_p_value=0.0105699	major_base=T	major_cov=87/2	major_frequency=7.876e-01	minor_base=A	minor_cov=24/0	new_cov=24/0	polymorphism_frequency=2.124e-01	polymorphism_score=48.4	prediction=polymorphism	ref_cov=87/2	total_cov=111/2
RA	1612	.	NC_007793	1167649	0	T	G	consensus_score=66.1	frequency=1	major_base=G	major_cov=8/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=8/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=8/19
RA	1613	.	NC_007793	1167775	0	G	A	consensus_score=150.7	frequency=1	major_base=A	major_cov=8/45	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=8/45	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=8/45
RA	1614	.	NC_007793	1168149	0	A	G	consensus_score=12.5	frequency=1	major_base=G	major_cov=2/5	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/5	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/5
RA	1615	.	NC_007793	1170956	0	C	T	bias_e_value=2917470	bias_p_value=1	consensus_score=203.2	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=73/1	major_frequency=9.867e-01	minor_base=C	minor_cov=1/0	new_cov=73/1	polymorphism_frequency=9.867e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=75/1
RA	1616	.	NC_007793	1171616	0	C	T	bias_e_value=2917470	bias_p_value=1	consensus_score=301.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=106/5	major_frequency=9.652e-01	minor_base=A	minor_cov=4/0	new_cov=106/5	polymorphism_frequency=9.652e-01	polymorphism_score=-5.6	prediction=consensus	ref_cov=1/0	total_cov=112/5
RA	1617	.	NC_007793	1171824	0	T	C	bias_e_value=2911610	bias_p_value=0.99799	consensus_score=61.6	fisher_strand_p_value=1	frequency=3.158e-01	ks_quality_p_value=0.937276	major_base=T	major_cov=39/0	major_frequency=6.842e-01	minor_base=C	minor_cov=18/0	new_cov=18/0	polymorphism_frequency=3.158e-01	polymorphism_score=29.3	prediction=polymorphism	ref_cov=39/0	total_cov=65/0
RA	1618	.	NC_007793	1174757	0	G	A	bias_e_value=1404670	bias_p_value=0.481468	consensus_score=305.1	fisher_strand_p_value=0.558949	frequency=2.891e-01	ks_quality_p_value=0.314576	major_base=G	major_cov=179/3	major_frequency=7.109e-01	minor_base=A	minor_cov=74/0	new_cov=74/0	polymorphism_frequency=2.891e-01	polymorphism_score=135.4	prediction=polymorphism	ref_cov=179/3	total_cov=253/3
RA	1619	.	NC_007793	1176325	0	G	A	bias_e_value=33042.9	bias_p_value=0.0113259	consensus_score=802.2	fisher_strand_p_value=0.0108242	frequency=2.229e-01	ks_quality_p_value=0.139609	major_base=G	major_cov=374/20	major_frequency=7.771e-01	minor_base=A	minor_cov=113/0	new_cov=113/0	polymorphism_frequency=2.229e-01	polymorphism_score=191.0	prediction=polymorphism	ref_cov=374/20	total_cov=488/20
RA	1620	.	NC_007793	1178003	1	.	A	bias_e_value=1456440	bias_p_value=0.499214	consensus_score=80.3	fisher_strand_p_value=1	frequency=2.391e-01	ks_quality_p_value=0.186214	major_base=.	major_cov=34/1	major_frequency=7.609e-01	minor_base=A	minor_cov=11/0	new_cov=11/0	polymorphism_frequency=2.391e-01	polymorphism_score=38.6	prediction=polymorphism	ref_cov=34/1	total_cov=45/1
RA	1621	.	NC_007793	1179803	0	T	A	bias_e_value=3262.73	bias_p_value=0.00111834	consensus_score=168.4	fisher_strand_p_value=0.0845144	frequency=4.104e-01	ks_quality_p_value=0.00130894	major_base=T	major_cov=152/6	major_frequency=5.896e-01	minor_base=A	minor_cov=110/0	new_cov=110/0	polymorphism_frequency=4.104e-01	polymorphism_score=267.7	prediction=polymorphism	ref_cov=152/6	total_cov=264/6
RA	1622	.	NC_007793	1179827	0	C	T	bias_e_value=2917470	bias_p_value=1	consensus_score=528.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=183/5	major_frequency=9.947e-01	minor_base=C	minor_cov=1/0	new_cov=183/5	polymorphism_frequency=9.947e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=185/5
RA	1623	.	NC_007793	1181076	0	G	A	bias_e_value=74.3038	bias_p_value=2.54686e-05	consensus_score=472.7	fisher_strand_p_value=0.587026	frequency=2.049e-01	ks_quality_p_value=3.04811e-06	major_base=G	major_cov=224/5	major_frequency=7.951e-01	minor_base=A	minor_cov=59/0	new_cov=59/0	polymorphism_frequency=2.049e-01	polymorphism_score=96.0	prediction=polymorphism	ref_cov=224/5	total_cov=283/5
RA	1624	.	NC_007793	1184658	0	A	T	bias_e_value=6.54643	bias_p_value=2.24387e-06	consensus_score=568.1	fisher_strand_p_value=7.05852e-06	frequency=2.703e-01	ks_quality_p_value=0.0188881	major_base=A	major_cov=260/37	major_frequency=7.297e-01	minor_base=T	minor_cov=110/0	new_cov=110/0	polymorphism_frequency=2.703e-01	polymorphism_score=255.4	prediction=polymorphism	ref_cov=260/37	total_cov=372/37
RA	1625	.	NC_007793	1184659	0	A	C	bias_e_value=0.76622	bias_p_value=2.62632e-07	consensus_score=688.2	fisher_strand_p_value=1.57322e-05	frequency=2.529e-01	ks_quality_p_value=0.000873921	major_base=A	major_cov=288/37	major_frequency=7.471e-01	minor_base=C	minor_cov=110/0	new_cov=110/0	polymorphism_frequency=2.529e-01	polymorphism_score=283.6	prediction=polymorphism	ref_cov=288/37	total_cov=399/37
RA	1626	.	NC_007793	1185383	0	C	T	consensus_score=83.1	frequency=1	major_base=T	major_cov=32/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=32/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=32/0
RA	1627	.	NC_007793	1186680	0	T	C	bias_e_value=122054	bias_p_value=0.0418357	consensus_score=364.8	fisher_strand_p_value=0.183914	frequency=3.324e-01	ks_quality_p_value=0.0381739	major_base=T	major_cov=225/6	major_frequency=6.676e-01	minor_base=C	minor_cov=115/0	new_cov=115/0	polymorphism_frequency=3.324e-01	polymorphism_score=211.7	prediction=polymorphism	ref_cov=225/6	total_cov=341/6
RA	1628	.	NC_007793	1192340	0	T	C	bias_e_value=2354220	bias_p_value=0.806939	consensus_score=116.1	fisher_strand_p_value=1	frequency=2.174e-01	ks_quality_p_value=0.44702	major_base=T	major_cov=54/0	major_frequency=7.826e-01	minor_base=C	minor_cov=15/0	new_cov=15/0	polymorphism_frequency=2.174e-01	polymorphism_score=19.3	prediction=polymorphism	ref_cov=54/0	total_cov=69/0
RA	1629	.	NC_007793	1193069	0	A	G	consensus_score=537.3	frequency=1	major_base=G	major_cov=182/6	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=182/6	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=182/6
RA	1630	.	NC_007793	1193210	1	.	T	bias_e_value=2852840	bias_p_value=0.977849	consensus_score=138.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.797039	major_base=T	major_cov=47/1	major_frequency=8.889e-01	minor_base=.	minor_cov=6/0	new_cov=47/1	polymorphism_frequency=8.889e-01	polymorphism_score=10.7	prediction=consensus	ref_cov=6/0	total_cov=54/1
RA	1631	.	NC_007793	1194045	0	G	A	bias_e_value=1651240	bias_p_value=0.565985	consensus_score=121.1	fisher_strand_p_value=0.579769	frequency=2.179e-01	ks_quality_p_value=0.39432	major_base=G	major_cov=56/5	major_frequency=7.821e-01	minor_base=A	minor_cov=17/0	new_cov=17/0	polymorphism_frequency=2.179e-01	polymorphism_score=25.4	prediction=polymorphism	ref_cov=56/5	total_cov=73/5
RA	1632	.	NC_007793	1195737	0	G	A	consensus_score=496.4	frequency=1	major_base=A	major_cov=177/6	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=177/6	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=177/6
RA	1633	.	NC_007793	1196186	0	G	A	bias_e_value=2769420	bias_p_value=0.949255	consensus_score=256.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.698834	major_base=A	major_cov=93/1	major_frequency=9.895e-01	minor_base=G	minor_cov=1/0	new_cov=93/1	polymorphism_frequency=9.895e-01	polymorphism_score=-5.2	prediction=consensus	ref_cov=1/0	total_cov=94/1
RA	1634	.	NC_007793	1197225	0	T	A	consensus_score=538.1	frequency=1	major_base=A	major_cov=190/7	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=190/7	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=190/7
RA	1635	.	NC_007793	1203842	0	T	C	consensus_score=77.7	frequency=1	major_base=C	major_cov=13/18	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=13/18	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=13/18
RA	1636	.	NC_007793	1212426	0	G	C	bias_e_value=2470700	bias_p_value=0.846864	consensus_score=33.3	fisher_strand_p_value=1	frequency=3.077e-01	ks_quality_p_value=0.50042	major_base=G	major_cov=16/2	major_frequency=6.923e-01	minor_base=C	minor_cov=8/0	new_cov=8/0	polymorphism_frequency=3.077e-01	polymorphism_score=15.3	prediction=polymorphism	ref_cov=16/2	total_cov=24/2
RA	1637	.	NC_007793	1214264	0	G	A	bias_e_value=2780910	bias_p_value=0.953192	consensus_score=19.0	fisher_strand_p_value=1	frequency=6.957e-01	ks_quality_p_value=0.71007	major_base=A	major_cov=16/0	major_frequency=6.957e-01	minor_base=G	minor_cov=7/0	new_cov=16/0	polymorphism_frequency=6.957e-01	polymorphism_score=7.0	prediction=polymorphism	ref_cov=7/0	total_cov=23/0
RA	1638	.	NC_007793	1215913	0	T	C	consensus_score=179.5	frequency=1	major_base=C	major_cov=58/10	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=58/10	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=58/10
RA	1639	.	NC_007793	1224094	0	G	A	bias_e_value=3048.88	bias_p_value=0.00104504	consensus_score=159.6	fisher_strand_p_value=0.148125	frequency=4.079e-01	ks_quality_p_value=0.000692728	major_base=G	major_cov=176/4	major_frequency=5.921e-01	minor_base=A	minor_cov=124/0	new_cov=124/0	polymorphism_frequency=4.079e-01	polymorphism_score=249.9	prediction=polymorphism	ref_cov=176/4	total_cov=300/4
RA	1640	.	NC_007793	1224507	0	G	A	bias_e_value=2562580	bias_p_value=0.878359	consensus_score=139.1	fisher_strand_p_value=0.570351	frequency=2.353e-01	ks_quality_p_value=0.962995	major_base=G	major_cov=74/4	major_frequency=7.647e-01	minor_base=A	minor_cov=24/0	new_cov=24/0	polymorphism_frequency=2.353e-01	polymorphism_score=20.3	prediction=polymorphism	ref_cov=74/4	total_cov=100/4
RA	1641	.	NC_007793	1224509	0	T	G	bias_e_value=1289910	bias_p_value=0.442132	consensus_score=86.6	fisher_strand_p_value=0.154015	frequency=3.895e-01	ks_quality_p_value=1	major_base=T	major_cov=54/4	major_frequency=6.105e-01	minor_base=G	minor_cov=37/0	new_cov=37/0	polymorphism_frequency=3.895e-01	polymorphism_score=44.1	prediction=polymorphism	ref_cov=54/4	total_cov=98/4
RA	1642	.	NC_007793	1224512	0	G	T	bias_e_value=1491240	bias_p_value=0.511143	consensus_score=123.0	fisher_strand_p_value=0.569378	frequency=2.396e-01	ks_quality_p_value=0.339656	major_base=G	major_cov=69/4	major_frequency=7.604e-01	minor_base=T	minor_cov=23/0	new_cov=23/0	polymorphism_frequency=2.396e-01	polymorphism_score=22.5	prediction=polymorphism	ref_cov=69/4	total_cov=94/4
RA	1643	.	NC_007793	1224515	0	A	T	bias_e_value=2468430	bias_p_value=0.846087	consensus_score=42.4	fisher_strand_p_value=0.499299	frequency=4.516e-01	ks_quality_p_value=1	major_base=A	major_cov=49/2	major_frequency=5.484e-01	minor_base=T	minor_cov=42/0	new_cov=42/0	polymorphism_frequency=4.516e-01	polymorphism_score=62.6	prediction=polymorphism	ref_cov=49/2	total_cov=93/2
RA	1644	.	NC_007793	1224517	0	G	T	bias_e_value=2521880	bias_p_value=0.864406	consensus_score=70.0	fisher_strand_p_value=0.52674	frequency=3.736e-01	ks_quality_p_value=1	major_base=G	major_cov=55/2	major_frequency=6.264e-01	minor_base=T	minor_cov=34/0	new_cov=34/0	polymorphism_frequency=3.736e-01	polymorphism_score=46.2	prediction=polymorphism	ref_cov=55/2	total_cov=93/2
RA	1645	.	NC_007793	1224518	0	C	T	bias_e_value=2917470	bias_p_value=1	consensus_score=61.0	fisher_strand_p_value=1	frequency=3.026e-01	ks_quality_p_value=1	major_base=C	major_cov=51/2	major_frequency=6.974e-01	minor_base=T	minor_cov=23/0	new_cov=23/0	polymorphism_frequency=3.026e-01	polymorphism_score=32.1	prediction=polymorphism	ref_cov=51/2	total_cov=93/2
RA	1646	.	NC_007793	1224520	0	T	G	bias_e_value=2917470	bias_p_value=1	consensus_score=150.7	fisher_strand_p_value=1	frequency=2.500e-01	ks_quality_p_value=1	major_base=T	major_cov=66/0	major_frequency=7.500e-01	minor_base=G	minor_cov=22/0	new_cov=22/0	polymorphism_frequency=2.500e-01	polymorphism_score=13.9	prediction=polymorphism	ref_cov=66/0	total_cov=90/0
RA	1647	.	NC_007793	1224523	0	A	T	bias_e_value=2917470	bias_p_value=1	consensus_score=47.6	fisher_strand_p_value=1	frequency=4.432e-01	ks_quality_p_value=1	major_base=A	major_cov=49/0	major_frequency=5.568e-01	minor_base=T	minor_cov=39/0	new_cov=39/0	polymorphism_frequency=4.432e-01	polymorphism_score=58.6	prediction=polymorphism	ref_cov=49/0	total_cov=92/0
RA	1648	.	NC_007793	1224524	0	C	T	bias_e_value=2917470	bias_p_value=1	consensus_score=118.8	fisher_strand_p_value=1	frequency=2.209e-01	ks_quality_p_value=1	major_base=C	major_cov=67/0	major_frequency=7.791e-01	minor_base=T	minor_cov=19/0	new_cov=19/0	polymorphism_frequency=2.209e-01	polymorphism_score=17.0	prediction=polymorphism	ref_cov=67/0	total_cov=93/0
RA	1649	.	NC_007793	1224533	0	C	T	bias_e_value=2917470	bias_p_value=1	consensus_score=88.1	fisher_strand_p_value=1	frequency=2.809e-01	ks_quality_p_value=1	major_base=C	major_cov=63/1	major_frequency=7.191e-01	minor_base=T	minor_cov=25/0	new_cov=25/0	polymorphism_frequency=2.809e-01	polymorphism_score=30.8	prediction=polymorphism	ref_cov=63/1	total_cov=92/1
RA	1650	.	NC_007793	1224540	0	G	A	bias_e_value=2917470	bias_p_value=1	consensus_score=85.5	fisher_strand_p_value=1	frequency=3.636e-01	ks_quality_p_value=1	major_base=G	major_cov=62/1	major_frequency=6.364e-01	minor_base=A	minor_cov=36/0	new_cov=36/0	polymorphism_frequency=3.636e-01	polymorphism_score=48.8	prediction=polymorphism	ref_cov=62/1	total_cov=103/1
RA	1651	.	NC_007793	1224551	0	T	G	bias_e_value=2917470	bias_p_value=1	consensus_score=143.9	fisher_strand_p_value=1	frequency=3.396e-01	ks_quality_p_value=1	major_base=T	major_cov=69/1	major_frequency=6.604e-01	minor_base=G	minor_cov=36/0	new_cov=36/0	polymorphism_frequency=3.396e-01	polymorphism_score=45.8	prediction=polymorphism	ref_cov=69/1	total_cov=110/1
RA	1652	.	NC_007793	1225367	0	T	C	bias_e_value=3817.29	bias_p_value=0.00130842	consensus_score=1070.9	fisher_strand_p_value=0.00149094	frequency=2.254e-01	ks_quality_p_value=0.0883325	major_base=T	major_cov=468/27	major_frequency=7.746e-01	minor_base=C	minor_cov=144/0	new_cov=144/0	polymorphism_frequency=2.254e-01	polymorphism_score=235.2	prediction=polymorphism	ref_cov=468/27	total_cov=612/27
RA	1653	.	NC_007793	1225369	0	T	G	bias_e_value=1444.36	bias_p_value=0.000495073	consensus_score=1464.9	fisher_strand_p_value=0.0027326	frequency=2.057e-01	ks_quality_p_value=0.0164559	major_base=T	major_cov=529/27	major_frequency=7.943e-01	minor_base=G	minor_cov=144/0	new_cov=144/0	polymorphism_frequency=2.057e-01	polymorphism_score=288.4	prediction=polymorphism	ref_cov=529/27	total_cov=676/27
RA	1654	.	NC_007793	1225501	0	G	A	bias_e_value=958180	bias_p_value=0.328429	consensus_score=-2.4	fisher_strand_p_value=0.117754	frequency=4.951e-01	ks_quality_p_value=0.842487	major_base=G	major_cov=48/4	major_frequency=5.049e-01	minor_base=A	minor_cov=51/0	new_cov=51/0	polymorphism_frequency=4.951e-01	polymorphism_score=110.4	prediction=polymorphism	ref_cov=48/4	total_cov=99/4
RA	1655	.	NC_007793	1225505	1	.	G	bias_e_value=920202	bias_p_value=0.315411	consensus_score=71.5	fisher_strand_p_value=0.11602	frequency=5.000e-01	ks_quality_p_value=0.807118	major_base=G	major_cov=42/0	major_frequency=5.000e-01	minor_base=.	minor_cov=38/4	new_cov=42/0	polymorphism_frequency=5.000e-01	polymorphism_score=169.9	prediction=polymorphism	ref_cov=38/4	total_cov=81/4
RA	1656	.	NC_007793	1239264	0	T	A	bias_e_value=2757320	bias_p_value=0.945108	consensus_score=156.3	fisher_strand_p_value=1	frequency=2.553e-01	ks_quality_p_value=0.687516	major_base=T	major_cov=69/1	major_frequency=7.447e-01	minor_base=A	minor_cov=24/0	new_cov=24/0	polymorphism_frequency=2.553e-01	polymorphism_score=47.2	prediction=polymorphism	ref_cov=69/1	total_cov=93/1
RA	1657	.	NC_007793	1241656	0	T	G	bias_e_value=244962	bias_p_value=0.0839638	consensus_score=794.1	fisher_strand_p_value=0.016437	frequency=2.306e-01	ks_quality_p_value=1	major_base=T	major_cov=290/17	major_frequency=7.694e-01	minor_base=G	minor_cov=92/0	new_cov=92/0	polymorphism_frequency=2.306e-01	polymorphism_score=36.4	prediction=polymorphism	ref_cov=290/17	total_cov=396/17
RA	1658	.	NC_007793	1241659	0	C	T	bias_e_value=390581	bias_p_value=0.133876	consensus_score=518.0	fisher_strand_p_value=0.0296242	frequency=2.131e-01	ks_quality_p_value=1	major_base=C	major_cov=308/17	major_frequency=7.869e-01	minor_base=T	minor_cov=88/0	new_cov=88/0	polymorphism_frequency=2.131e-01	polymorphism_score=92.2	prediction=polymorphism	ref_cov=308/17	total_cov=397/17
RA	1659	.	NC_007793	1241670	0	A	T	bias_e_value=156064	bias_p_value=0.0534928	consensus_score=549.1	fisher_strand_p_value=0.00944772	frequency=2.426e-01	ks_quality_p_value=1	major_base=A	major_cov=291/18	major_frequency=7.574e-01	minor_base=T	minor_cov=99/0	new_cov=99/0	polymorphism_frequency=2.426e-01	polymorphism_score=104.4	prediction=polymorphism	ref_cov=291/18	total_cov=395/18
RA	1660	.	NC_007793	1241686	0	C	T	bias_e_value=1554890	bias_p_value=0.532958	consensus_score=525.8	fisher_strand_p_value=0.206953	frequency=2.186e-01	ks_quality_p_value=1	major_base=C	major_cov=272/14	major_frequency=7.814e-01	minor_base=T	minor_cov=79/1	new_cov=79/1	polymorphism_frequency=2.186e-01	polymorphism_score=70.0	prediction=polymorphism	ref_cov=272/14	total_cov=357/15
RA	1661	.	NC_007793	1245445	0	G	T	bias_e_value=2858750	bias_p_value=0.979875	consensus_score=62.0	fisher_strand_p_value=1	frequency=2.439e-01	ks_quality_p_value=0.806202	major_base=G	major_cov=29/2	major_frequency=7.561e-01	minor_base=T	minor_cov=10/0	new_cov=10/0	polymorphism_frequency=2.439e-01	polymorphism_score=21.5	prediction=polymorphism	ref_cov=29/2	total_cov=39/2
RA	1662	.	NC_007793	1247550	0	C	G	bias_e_value=617159	bias_p_value=0.211539	consensus_score=257.2	fisher_strand_p_value=0.334577	frequency=2.449e-01	ks_quality_p_value=0.161322	major_base=C	major_cov=106/5	major_frequency=7.551e-01	minor_base=G	minor_cov=36/0	new_cov=36/0	polymorphism_frequency=2.449e-01	polymorphism_score=93.2	prediction=polymorphism	ref_cov=106/5	total_cov=143/5
RA	1663	.	NC_007793	1248004	0	G	A	bias_e_value=2092960	bias_p_value=0.717389	consensus_score=39.2	fisher_strand_p_value=0.414894	frequency=5.851e-01	ks_quality_p_value=0.843477	major_base=A	major_cov=55/0	major_frequency=5.851e-01	minor_base=G	minor_cov=38/1	new_cov=55/0	polymorphism_frequency=5.851e-01	polymorphism_score=74.6	prediction=polymorphism	ref_cov=38/1	total_cov=94/1
RA	1664	.	NC_007793	1248008	0	G	C	bias_e_value=2392120	bias_p_value=0.819929	consensus_score=14.6	fisher_strand_p_value=0.466019	frequency=5.340e-01	ks_quality_p_value=0.994652	major_base=C	major_cov=55/0	major_frequency=5.340e-01	minor_base=G	minor_cov=47/1	new_cov=55/0	polymorphism_frequency=5.340e-01	polymorphism_score=139.6	prediction=polymorphism	ref_cov=47/1	total_cov=103/1
RA	1665	.	NC_007793	1251223	0	C	T	consensus_score=11.6	frequency=1	major_base=T	major_cov=6/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=6/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=6/0
RA	1666	.	NC_007793	1255693	0	A	T	bias_e_value=1645020	bias_p_value=0.563851	consensus_score=192.7	fisher_strand_p_value=1	frequency=2.308e-01	ks_quality_p_value=0.227171	major_base=A	major_cov=88/2	major_frequency=7.692e-01	minor_base=T	minor_cov=27/0	new_cov=27/0	polymorphism_frequency=2.308e-01	polymorphism_score=58.7	prediction=polymorphism	ref_cov=88/2	total_cov=116/2
RA	1667	.	NC_007793	1264866	0	G	T	bias_e_value=37357.8	bias_p_value=0.0128049	consensus_score=60.3	fisher_strand_p_value=0.29308	frequency=3.378e-01	ks_quality_p_value=0.00594184	major_base=G	major_cov=45/4	major_frequency=6.622e-01	minor_base=T	minor_cov=25/0	new_cov=25/0	polymorphism_frequency=3.378e-01	polymorphism_score=62.8	prediction=polymorphism	ref_cov=45/4	total_cov=70/4
RA	1668	.	NC_007793	1264868	0	A	G	bias_e_value=1343460	bias_p_value=0.460487	consensus_score=65.8	fisher_strand_p_value=0.295543	frequency=3.288e-01	ks_quality_p_value=0.554898	major_base=A	major_cov=45/4	major_frequency=6.712e-01	minor_base=G	minor_cov=24/0	new_cov=24/0	polymorphism_frequency=3.288e-01	polymorphism_score=43.8	prediction=polymorphism	ref_cov=45/4	total_cov=69/4
RA	1669	.	NC_007793	1265558	0	A	G	bias_e_value=7338.36	bias_p_value=0.00251532	consensus_score=-0.7	fisher_strand_p_value=0.00155333	frequency=4.950e-01	ks_quality_p_value=0.175913	major_base=A	major_cov=92/10	major_frequency=5.050e-01	minor_base=G	minor_cov=100/0	new_cov=100/0	polymorphism_frequency=4.950e-01	polymorphism_score=217.3	prediction=polymorphism	ref_cov=92/10	total_cov=192/10
RA	1670	.	NC_007793	1266556	0	C	A	bias_e_value=2117030	bias_p_value=0.725639	consensus_score=273.5	fisher_strand_p_value=1	frequency=2.833e-01	ks_quality_p_value=0.357896	major_base=C	major_cov=128/1	major_frequency=7.167e-01	minor_base=A	minor_cov=51/0	new_cov=51/0	polymorphism_frequency=2.833e-01	polymorphism_score=117.9	prediction=polymorphism	ref_cov=128/1	total_cov=180/1
RA	1671	.	NC_007793	1266556	1	.	A	bias_e_value=1918.2	bias_p_value=0.000657489	consensus_score=84.3	fisher_strand_p_value=1	frequency=3.923e-01	ks_quality_p_value=6.14645e-05	major_base=.	major_cov=109/1	major_frequency=6.077e-01	minor_base=A	minor_cov=71/0	new_cov=71/0	polymorphism_frequency=3.923e-01	polymorphism_score=292.4	prediction=polymorphism	ref_cov=109/1	total_cov=180/1
RA	1672	.	NC_007793	1267921	0	T	G	consensus_score=1221.1	frequency=1	major_base=G	major_cov=420/5	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=420/5	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=420/5
RA	1673	.	NC_007793	1269542	0	A	T	consensus_score=205.3	frequency=1	major_base=T	major_cov=71/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=71/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=71/0
RA	1674	.	NC_007793	1272003	0	G	C	consensus_score=156.0	frequency=1	major_base=C	major_cov=61/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=61/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=61/0
RA	1675	.	NC_007793	1273239	0	T	C	bias_e_value=2647180	bias_p_value=0.907354	consensus_score=62.2	fisher_strand_p_value=1	frequency=3.091e-01	ks_quality_p_value=0.601685	major_base=T	major_cov=36/2	major_frequency=6.909e-01	minor_base=C	minor_cov=17/0	new_cov=17/0	polymorphism_frequency=3.091e-01	polymorphism_score=26.2	prediction=polymorphism	ref_cov=36/2	total_cov=53/2
RA	1676	.	NC_007793	1274500	0	A	T	bias_e_value=272068	bias_p_value=0.0932548	consensus_score=324.2	fisher_strand_p_value=1	frequency=2.193e-01	ks_quality_p_value=0.018736	major_base=A	major_cov=144/2	major_frequency=7.807e-01	minor_base=T	minor_cov=41/0	new_cov=41/0	polymorphism_frequency=2.193e-01	polymorphism_score=89.7	prediction=polymorphism	ref_cov=144/2	total_cov=185/2
RA	1677	.	NC_007793	1277641	0	T	A	bias_e_value=2811040	bias_p_value=0.96352	consensus_score=395.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.742345	major_base=A	major_cov=138/4	major_frequency=9.930e-01	minor_base=G	minor_cov=1/0	new_cov=138/4	polymorphism_frequency=9.930e-01	polymorphism_score=-5.7	prediction=consensus	ref_cov=0/0	total_cov=139/4
RA	1678	.	NC_007793	1277749	0	G	A	bias_e_value=229318	bias_p_value=0.0786017	consensus_score=178.0	fisher_strand_p_value=0.574531	frequency=2.231e-01	ks_quality_p_value=0.0263598	major_base=G	major_cov=97/4	major_frequency=7.769e-01	minor_base=A	minor_cov=29/0	new_cov=29/0	polymorphism_frequency=2.231e-01	polymorphism_score=48.1	prediction=polymorphism	ref_cov=97/4	total_cov=126/4
RA	1679	.	NC_007793	1283623	0	A	G	bias_e_value=195155	bias_p_value=0.066892	consensus_score=447.4	fisher_strand_p_value=1	frequency=2.176e-01	ks_quality_p_value=0.0124126	major_base=A	major_cov=204/1	major_frequency=7.824e-01	minor_base=G	minor_cov=57/0	new_cov=57/0	polymorphism_frequency=2.176e-01	polymorphism_score=89.5	prediction=polymorphism	ref_cov=204/1	total_cov=263/1
RA	1680	.	NC_007793	1286092	0	G	A	bias_e_value=1543750	bias_p_value=0.529141	consensus_score=63.1	fisher_strand_p_value=0.314373	frequency=2.400e-01	ks_quality_p_value=0.650623	major_base=G	major_cov=32/6	major_frequency=7.600e-01	minor_base=A	minor_cov=12/0	new_cov=12/0	polymorphism_frequency=2.400e-01	polymorphism_score=18.3	prediction=polymorphism	ref_cov=32/6	total_cov=44/6
RA	1681	.	NC_007793	1286095	0	A	G	bias_e_value=2917470	bias_p_value=1	consensus_score=57.6	fisher_strand_p_value=1	frequency=2.444e-01	ks_quality_p_value=1	major_base=A	major_cov=32/2	major_frequency=7.556e-01	minor_base=G	minor_cov=11/0	new_cov=11/0	polymorphism_frequency=2.444e-01	polymorphism_score=14.0	prediction=polymorphism	ref_cov=32/2	total_cov=43/2
RA	1682	.	NC_007793	1286986	0	A	G	consensus_score=251.8	frequency=1	major_base=G	major_cov=90/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=90/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=90/0
RA	1683	.	NC_007793	1287660	0	G	A	bias_e_value=1182870	bias_p_value=0.405442	consensus_score=90.5	fisher_strand_p_value=1	frequency=2.344e-01	ks_quality_p_value=0.135054	major_base=G	major_cov=47/2	major_frequency=7.656e-01	minor_base=A	minor_cov=15/0	new_cov=15/0	polymorphism_frequency=2.344e-01	polymorphism_score=22.0	prediction=polymorphism	ref_cov=47/2	total_cov=63/2
RA	1684	.	NC_007793	1288032	0	G	C	bias_e_value=205815	bias_p_value=0.0705458	consensus_score=96.4	fisher_strand_p_value=0.176348	frequency=2.407e-01	ks_quality_p_value=0.0751436	major_base=G	major_cov=34/7	major_frequency=7.593e-01	minor_base=C	minor_cov=13/0	new_cov=13/0	polymorphism_frequency=2.407e-01	polymorphism_score=29.1	prediction=polymorphism	ref_cov=34/7	total_cov=47/7
RA	1685	.	NC_007793	1288033	0	A	G	bias_e_value=58122.4	bias_p_value=0.0199222	consensus_score=69.8	fisher_strand_p_value=0.176348	frequency=2.407e-01	ks_quality_p_value=0.0165199	major_base=A	major_cov=34/7	major_frequency=7.593e-01	minor_base=G	minor_cov=13/0	new_cov=13/0	polymorphism_frequency=2.407e-01	polymorphism_score=20.8	prediction=polymorphism	ref_cov=34/7	total_cov=47/7
RA	1686	.	NC_007793	1295497	0	A	G	consensus_score=87.1	frequency=1	major_base=G	major_cov=35/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=35/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=35/0
RA	1687	.	NC_007793	1296455	0	T	G	bias_e_value=658463	bias_p_value=0.225697	consensus_score=172.2	fisher_strand_p_value=0.0588989	frequency=2.804e-01	ks_quality_p_value=1	major_base=T	major_cov=68/9	major_frequency=7.196e-01	minor_base=G	minor_cov=30/0	new_cov=30/0	polymorphism_frequency=2.804e-01	polymorphism_score=15.3	prediction=polymorphism	ref_cov=68/9	total_cov=100/9
RA	1688	.	NC_007793	1297787	0	A	G	bias_e_value=5532.9	bias_p_value=0.00189647	consensus_score=1465.8	fisher_strand_p_value=0.00424617	frequency=2.220e-01	ks_quality_p_value=0.0469087	major_base=A	major_cov=685/23	major_frequency=7.780e-01	minor_base=G	minor_cov=202/0	new_cov=202/0	polymorphism_frequency=2.220e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=685/23	total_cov=891/23
RA	1689	.	NC_007793	1304649	0	C	T	bias_e_value=46207	bias_p_value=0.0158381	consensus_score=47.8	fisher_strand_p_value=0.0453924	frequency=3.636e-01	ks_quality_p_value=0.0490991	major_base=C	major_cov=41/8	major_frequency=6.364e-01	minor_base=T	minor_cov=28/0	new_cov=28/0	polymorphism_frequency=3.636e-01	polymorphism_score=55.2	prediction=polymorphism	ref_cov=41/8	total_cov=69/8
RA	1690	.	NC_007793	1304651	0	T	G	bias_e_value=133109	bias_p_value=0.0456247	consensus_score=65.6	fisher_strand_p_value=0.0231912	frequency=3.684e-01	ks_quality_p_value=0.336035	major_base=T	major_cov=40/8	major_frequency=6.316e-01	minor_base=G	minor_cov=28/0	new_cov=28/0	polymorphism_frequency=3.684e-01	polymorphism_score=66.9	prediction=polymorphism	ref_cov=40/8	total_cov=68/8
RA	1691	.	NC_007793	1305668	1	.	A	bias_e_value=92621.9	bias_p_value=0.0317473	consensus_score=309.3	fisher_strand_p_value=0.0698265	frequency=2.298e-01	ks_quality_p_value=0.072298	major_base=.	major_cov=113/11	major_frequency=7.702e-01	minor_base=A	minor_cov=37/0	new_cov=37/0	polymorphism_frequency=2.298e-01	polymorphism_score=142.3	prediction=polymorphism	ref_cov=113/11	total_cov=150/11
RA	1692	.	NC_007793	1311197	0	A	.	bias_e_value=1508360	bias_p_value=0.517009	consensus_score=44.8	fisher_strand_p_value=1	frequency=2.692e-01	ks_quality_p_value=0.196983	major_base=A	major_cov=18/1	major_frequency=7.308e-01	minor_base=.	minor_cov=7/0	new_cov=7/0	polymorphism_frequency=2.692e-01	polymorphism_score=16.1	prediction=polymorphism	ref_cov=18/1	total_cov=27/1
RA	1693	.	NC_007793	1311199	0	G	T	bias_e_value=544710	bias_p_value=0.186706	consensus_score=7.0	fisher_strand_p_value=1	frequency=4.167e-01	ks_quality_p_value=0.0456974	major_base=G	major_cov=13/1	major_frequency=5.833e-01	minor_base=T	minor_cov=10/0	new_cov=10/0	polymorphism_frequency=4.167e-01	polymorphism_score=22.0	prediction=polymorphism	ref_cov=13/1	total_cov=23/1
RA	1694	.	NC_007793	1316107	0	A	G	consensus_score=42.2	frequency=1	major_base=G	major_cov=17/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=17/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=17/1
RA	1695	.	NC_007793	1323920	0	A	T	bias_e_value=0.522448	bias_p_value=1.79076e-07	consensus_score=52.1	fisher_strand_p_value=0.00374946	frequency=4.672e-01	ks_quality_p_value=2.44847e-06	major_base=A	major_cov=207/12	major_frequency=5.328e-01	minor_base=T	minor_cov=191/1	new_cov=191/1	polymorphism_frequency=4.672e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=207/12	total_cov=400/13
RA	1696	.	NC_007793	1324139	0	A	G	bias_e_value=2917470	bias_p_value=1	consensus_score=91.6	fisher_strand_p_value=1	frequency=2.069e-01	ks_quality_p_value=0.99975	major_base=A	major_cov=46/0	major_frequency=7.931e-01	minor_base=G	minor_cov=12/0	new_cov=12/0	polymorphism_frequency=2.069e-01	polymorphism_score=13.5	prediction=polymorphism	ref_cov=46/0	total_cov=58/0
RA	1697	.	NC_007793	1333945	0	C	T	consensus_score=74.1	frequency=1	major_base=T	major_cov=28/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=28/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/0
RA	1698	.	NC_007793	1338438	0	T	A	consensus_score=141.4	frequency=1	major_base=A	major_cov=50/3	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=50/3	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=50/3
RA	1699	.	NC_007793	1356508	0	A	T	bias_e_value=2496460	bias_p_value=0.855695	consensus_score=16.9	fisher_strand_p_value=1	frequency=3.333e-01	ks_quality_p_value=0.513417	major_base=A	major_cov=16/0	major_frequency=6.667e-01	minor_base=T	minor_cov=8/0	new_cov=8/0	polymorphism_frequency=3.333e-01	polymorphism_score=14.8	prediction=polymorphism	ref_cov=16/0	total_cov=26/0
RA	1700	.	NC_007793	1356509	0	G	C	bias_e_value=1571660	bias_p_value=0.538705	consensus_score=32.2	fisher_strand_p_value=1	frequency=3.077e-01	ks_quality_p_value=0.210622	major_base=G	major_cov=18/0	major_frequency=6.923e-01	minor_base=C	minor_cov=8/0	new_cov=8/0	polymorphism_frequency=3.077e-01	polymorphism_score=16.2	prediction=polymorphism	ref_cov=18/0	total_cov=26/0
RA	1701	.	NC_007793	1357593	0	C	A	bias_e_value=2917470	bias_p_value=1	consensus_score=411.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.999101	major_base=A	major_cov=138/3	major_frequency=9.930e-01	minor_base=T	minor_cov=1/0	new_cov=138/3	polymorphism_frequency=9.930e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=140/3
RA	1702	.	NC_007793	1359009	0	A	G	bias_e_value=2339290	bias_p_value=0.801823	consensus_score=34.3	fisher_strand_p_value=0.539421	frequency=3.256e-01	ks_quality_p_value=0.817025	major_base=A	major_cov=26/3	major_frequency=6.744e-01	minor_base=G	minor_cov=14/0	new_cov=14/0	polymorphism_frequency=3.256e-01	polymorphism_score=24.5	prediction=polymorphism	ref_cov=26/3	total_cov=40/3
RA	1703	.	NC_007793	1359012	0	A	C	bias_e_value=2542010	bias_p_value=0.871307	consensus_score=52.6	fisher_strand_p_value=0.547976	frequency=2.750e-01	ks_quality_p_value=0.981213	major_base=A	major_cov=26/3	major_frequency=7.250e-01	minor_base=C	minor_cov=11/0	new_cov=11/0	polymorphism_frequency=2.750e-01	polymorphism_score=24.8	prediction=polymorphism	ref_cov=26/3	total_cov=37/3
RA	1704	.	NC_007793	1359013	0	T	G	bias_e_value=2560360	bias_p_value=0.877596	consensus_score=59.9	fisher_strand_p_value=0.547976	frequency=2.750e-01	ks_quality_p_value=1	major_base=T	major_cov=26/3	major_frequency=7.250e-01	minor_base=G	minor_cov=11/0	new_cov=11/0	polymorphism_frequency=2.750e-01	polymorphism_score=18.5	prediction=polymorphism	ref_cov=26/3	total_cov=37/3
RA	1705	.	NC_007793	1363207	0	A	T	consensus_score=214.2	frequency=1	major_base=T	major_cov=75/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=75/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=75/0
RA	1706	.	NC_007793	1368129	0	A	G	bias_e_value=2775950	bias_p_value=0.951491	consensus_score=58.0	fisher_strand_p_value=1	frequency=2.885e-01	ks_quality_p_value=0.705152	major_base=A	major_cov=36/1	major_frequency=7.115e-01	minor_base=G	minor_cov=15/0	new_cov=15/0	polymorphism_frequency=2.885e-01	polymorphism_score=22.9	prediction=polymorphism	ref_cov=36/1	total_cov=51/1
RA	1707	.	NC_007793	1368132	0	C	A	bias_e_value=2917440	bias_p_value=0.999992	consensus_score=68.4	fisher_strand_p_value=1	frequency=2.857e-01	ks_quality_p_value=0.995927	major_base=C	major_cov=34/1	major_frequency=7.143e-01	minor_base=A	minor_cov=14/0	new_cov=14/0	polymorphism_frequency=2.857e-01	polymorphism_score=29.9	prediction=polymorphism	ref_cov=34/1	total_cov=48/1
RA	1708	.	NC_007793	1368135	0	A	G	bias_e_value=125133	bias_p_value=0.042891	consensus_score=64.6	fisher_strand_p_value=1	frequency=2.708e-01	ks_quality_p_value=0.00723418	major_base=A	major_cov=34/1	major_frequency=7.292e-01	minor_base=G	minor_cov=13/0	new_cov=13/0	polymorphism_frequency=2.708e-01	polymorphism_score=19.0	prediction=polymorphism	ref_cov=34/1	total_cov=47/1
RA	1709	.	NC_007793	1368568	0	G	A	bias_e_value=2906340	bias_p_value=0.996185	consensus_score=81.8	fisher_strand_p_value=1	frequency=2.000e-01	ks_quality_p_value=0.913931	major_base=G	major_cov=37/3	major_frequency=8.000e-01	minor_base=A	minor_cov=10/0	new_cov=10/0	polymorphism_frequency=2.000e-01	polymorphism_score=11.7	prediction=polymorphism	ref_cov=37/3	total_cov=47/3
RA	1710	.	NC_007793	1370770	1	.	T	bias_e_value=2658950	bias_p_value=0.911388	consensus_score=273.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.609731	major_base=T	major_cov=31/63	major_frequency=9.895e-01	minor_base=.	minor_cov=0/1	new_cov=31/63	polymorphism_frequency=9.895e-01	polymorphism_score=-4.1	prediction=consensus	ref_cov=0/1	total_cov=31/64
RA	1711	.	NC_007793	1374405	0	A	C	consensus_score=149.6	frequency=1	major_base=C	major_cov=56/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=56/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=56/1
RA	1712	.	NC_007793	1381402	0	T	.	bias_e_value=2915670	bias_p_value=0.999382	consensus_score=76.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.965052	major_base=.	major_cov=22/0	major_frequency=9.565e-01	minor_base=T	minor_cov=1/0	new_cov=22/0	polymorphism_frequency=9.565e-01	polymorphism_score=-2.0	prediction=consensus	ref_cov=1/0	total_cov=23/0
RA	1713	.	NC_007793	1381403	0	A	.	bias_e_value=2917470	bias_p_value=1	consensus_score=77.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=.	major_cov=22/0	major_frequency=9.565e-01	minor_base=A	minor_cov=1/0	new_cov=22/0	polymorphism_frequency=9.565e-01	polymorphism_score=-2.5	prediction=consensus	ref_cov=1/0	total_cov=23/0
RA	1714	.	NC_007793	1381404	0	T	.	consensus_score=85.9	frequency=1	major_base=.	major_cov=23/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=23/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=23/0
RA	1715	.	NC_007793	1381405	0	A	.	consensus_score=85.9	frequency=1	major_base=.	major_cov=23/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=23/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=23/0
RA	1716	.	NC_007793	1381406	0	T	.	consensus_score=85.9	frequency=1	major_base=.	major_cov=23/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=23/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=23/0
RA	1717	.	NC_007793	1381407	0	G	.	consensus_score=85.9	frequency=1	major_base=.	major_cov=23/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=23/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=23/0
RA	1718	.	NC_007793	1381408	0	A	.	consensus_score=85.9	frequency=1	major_base=.	major_cov=23/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=23/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=23/0
RA	1719	.	NC_007793	1382463	0	C	T	consensus_score=26.7	frequency=1	major_base=T	major_cov=11/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=11/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=11/0
RA	1720	.	NC_007793	1390033	0	T	A	bias_e_value=29996.9	bias_p_value=0.0102818	consensus_score=259.3	fisher_strand_p_value=1	frequency=2.278e-01	ks_quality_p_value=0.00135174	major_base=T	major_cov=119/3	major_frequency=7.722e-01	minor_base=A	minor_cov=36/0	new_cov=36/0	polymorphism_frequency=2.278e-01	polymorphism_score=70.7	prediction=polymorphism	ref_cov=119/3	total_cov=159/3
RA	1721	.	NC_007793	1390037	0	G	C	bias_e_value=198470	bias_p_value=0.0680281	consensus_score=210.8	fisher_strand_p_value=0.556079	frequency=2.917e-01	ks_quality_p_value=0.0227882	major_base=G	major_cov=99/3	major_frequency=7.083e-01	minor_base=C	minor_cov=42/0	new_cov=42/0	polymorphism_frequency=2.917e-01	polymorphism_score=107.2	prediction=polymorphism	ref_cov=99/3	total_cov=141/3
RA	1722	.	NC_007793	1413936	0	C	T	bias_e_value=14455	bias_p_value=0.00495464	consensus_score=94.7	fisher_strand_p_value=0.184735	frequency=2.361e-01	ks_quality_p_value=0.00317758	major_base=C	major_cov=8/47	major_frequency=7.639e-01	minor_base=T	minor_cov=0/17	new_cov=0/17	polymorphism_frequency=2.361e-01	polymorphism_score=25.1	prediction=polymorphism	ref_cov=8/47	total_cov=8/64
RA	1723	.	NC_007793	1423567	0	G	A	consensus_score=33.9	frequency=1	major_base=A	major_cov=13/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=13/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=13/1
RA	1724	.	NC_007793	1428839	1	.	A	consensus_score=15.4	frequency=1	major_base=A	major_cov=8/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=8/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=8/0
RA	1725	.	NC_007793	1433527	0	C	T	consensus_score=50.0	frequency=1	major_base=T	major_cov=0/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/20
RA	1726	.	NC_007793	1440480	0	C	T	consensus_score=148.8	frequency=1	major_base=T	major_cov=4/51	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=4/51	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=4/51
RA	1727	.	NC_007793	1442893	0	T	C	consensus_score=282.0	frequency=1	major_base=C	major_cov=101/4	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=101/4	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=101/4
RA	1728	.	NC_007793	1445143	0	G	T	consensus_score=265.3	frequency=1	major_base=T	major_cov=8/88	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=8/88	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=8/88
RA	1729	.	NC_007793	1448069	0	A	T	bias_e_value=2888720	bias_p_value=0.990145	consensus_score=17.4	fisher_strand_p_value=1	frequency=5.946e-01	ks_quality_p_value=0.862931	major_base=T	major_cov=0/22	major_frequency=5.946e-01	minor_base=A	minor_cov=0/15	new_cov=0/22	polymorphism_frequency=5.946e-01	polymorphism_score=28.8	prediction=polymorphism	ref_cov=0/15	total_cov=0/37
RA	1730	.	NC_007793	1449654	0	A	C	bias_e_value=234558	bias_p_value=0.0803979	consensus_score=320.0	fisher_strand_p_value=0.0155746	frequency=3.583e-01	ks_quality_p_value=1	major_base=A	major_cov=10/153	major_frequency=6.417e-01	minor_base=C	minor_cov=0/91	new_cov=0/91	polymorphism_frequency=3.583e-01	polymorphism_score=102.0	prediction=polymorphism	ref_cov=10/153	total_cov=10/256
RA	1731	.	NC_007793	1449658	0	G	T	bias_e_value=979829	bias_p_value=0.335849	consensus_score=430.7	fisher_strand_p_value=0.124298	frequency=2.163e-01	ks_quality_p_value=0.824155	major_base=G	major_cov=10/182	major_frequency=7.837e-01	minor_base=T	minor_cov=0/53	new_cov=0/53	polymorphism_frequency=2.163e-01	polymorphism_score=57.0	prediction=polymorphism	ref_cov=10/182	total_cov=10/241
RA	1732	.	NC_007793	1449661	0	C	A	bias_e_value=392877	bias_p_value=0.134664	consensus_score=296.9	fisher_strand_p_value=0.0327658	frequency=3.184e-01	ks_quality_p_value=0.910953	major_base=C	major_cov=10/142	major_frequency=6.816e-01	minor_base=A	minor_cov=0/71	new_cov=0/71	polymorphism_frequency=3.184e-01	polymorphism_score=96.3	prediction=polymorphism	ref_cov=10/142	total_cov=10/223
RA	1733	.	NC_007793	1449665	0	A	G	bias_e_value=707810	bias_p_value=0.242611	consensus_score=257.2	fisher_strand_p_value=0.0649788	frequency=2.850e-01	ks_quality_p_value=1	major_base=A	major_cov=10/128	major_frequency=7.150e-01	minor_base=G	minor_cov=0/55	new_cov=0/55	polymorphism_frequency=2.850e-01	polymorphism_score=34.1	prediction=polymorphism	ref_cov=10/128	total_cov=10/194
RA	1734	.	NC_007793	1449668	0	T	G	bias_e_value=225005	bias_p_value=0.0771232	consensus_score=205.4	fisher_strand_p_value=0.0147926	frequency=3.641e-01	ks_quality_p_value=1	major_base=T	major_cov=10/121	major_frequency=6.359e-01	minor_base=G	minor_cov=0/75	new_cov=0/75	polymorphism_frequency=3.641e-01	polymorphism_score=77.9	prediction=polymorphism	ref_cov=10/121	total_cov=10/196
RA	1735	.	NC_007793	1449671	0	G	T	bias_e_value=728757	bias_p_value=0.249791	consensus_score=275.4	fisher_strand_p_value=0.070814	frequency=2.347e-01	ks_quality_p_value=0.954961	major_base=G	major_cov=11/152	major_frequency=7.653e-01	minor_base=T	minor_cov=0/50	new_cov=0/50	polymorphism_frequency=2.347e-01	polymorphism_score=48.7	prediction=polymorphism	ref_cov=11/152	total_cov=11/204
RA	1736	.	NC_007793	1449675	0	T	A	bias_e_value=473967	bias_p_value=0.162458	consensus_score=319.7	fisher_strand_p_value=0.0380587	frequency=2.831e-01	ks_quality_p_value=1	major_base=T	major_cov=11/222	major_frequency=7.169e-01	minor_base=A	minor_cov=0/92	new_cov=0/92	polymorphism_frequency=2.831e-01	polymorphism_score=99.4	prediction=polymorphism	ref_cov=11/222	total_cov=11/370
RA	1737	.	NC_007793	1449676	0	C	A	bias_e_value=211.221	bias_p_value=7.23986e-05	consensus_score=60.6	fisher_strand_p_value=0.000395021	frequency=5.027e-01	ks_quality_p_value=0.0139838	major_base=A	major_cov=0/188	major_frequency=5.027e-01	minor_base=C	minor_cov=11/175	new_cov=0/188	polymorphism_frequency=5.027e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=11/175	total_cov=11/369
RA	1738	.	NC_007793	1449681	0	T	G	bias_e_value=781434	bias_p_value=0.267847	consensus_score=795.6	fisher_strand_p_value=0.0744512	frequency=2.401e-01	ks_quality_p_value=1	major_base=T	major_cov=11/429	major_frequency=7.599e-01	minor_base=G	minor_cov=0/139	new_cov=0/139	polymorphism_frequency=2.401e-01	polymorphism_score=98.2	prediction=polymorphism	ref_cov=11/429	total_cov=11/588
RA	1739	.	NC_007793	1449828	0	G	A	consensus_score=441.1	frequency=1	major_base=A	major_cov=10/141	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=10/141	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=10/141
RA	1740	.	NC_007793	1453129	0	A	.	bias_e_value=107054	bias_p_value=0.0366941	consensus_score=246.9	fisher_strand_p_value=1	frequency=2.636e-01	ks_quality_p_value=0.00599963	major_base=A	major_cov=0/81	major_frequency=7.364e-01	minor_base=.	minor_cov=0/29	new_cov=0/29	polymorphism_frequency=2.636e-01	polymorphism_score=83.5	prediction=polymorphism	ref_cov=0/81	total_cov=0/112
RA	1741	.	NC_007793	1453525	0	A	G	consensus_score=119.5	frequency=1	major_base=G	major_cov=6/41	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=6/41	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=6/41
RA	1742	.	NC_007793	1453835	0	T	C	consensus_score=544.9	frequency=1	major_base=C	major_cov=1/192	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/192	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/192
RA	1743	.	NC_007793	1456464	0	A	G	bias_e_value=2503710	bias_p_value=0.858178	consensus_score=46.8	fisher_strand_p_value=1	frequency=2.895e-01	ks_quality_p_value=0.517161	major_base=A	major_cov=27/0	major_frequency=7.105e-01	minor_base=G	minor_cov=11/0	new_cov=11/0	polymorphism_frequency=2.895e-01	polymorphism_score=14.8	prediction=polymorphism	ref_cov=27/0	total_cov=38/0
RA	1744	.	NC_007793	1458928	0	A	C	consensus_score=82.1	frequency=1	major_base=C	major_cov=3/30	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=3/30	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=3/30
RA	1745	.	NC_007793	1458995	0	A	T	bias_e_value=2477010	bias_p_value=0.849028	consensus_score=48.1	fisher_strand_p_value=0.508021	frequency=2.941e-01	ks_quality_p_value=0.991215	major_base=A	major_cov=1/23	major_frequency=7.059e-01	minor_base=T	minor_cov=1/9	new_cov=1/9	polymorphism_frequency=2.941e-01	polymorphism_score=17.8	prediction=polymorphism	ref_cov=1/23	total_cov=2/32
RA	1746	.	NC_007793	1458998	0	T	A	bias_e_value=2172780	bias_p_value=0.744749	consensus_score=53.5	fisher_strand_p_value=0.406452	frequency=2.258e-01	ks_quality_p_value=0.927494	major_base=T	major_cov=1/23	major_frequency=7.742e-01	minor_base=A	minor_cov=1/6	new_cov=1/6	polymorphism_frequency=2.258e-01	polymorphism_score=11.1	prediction=polymorphism	ref_cov=1/23	total_cov=2/29
RA	1747	.	NC_007793	1459009	0	C	T	bias_e_value=2389370	bias_p_value=0.818987	consensus_score=56.6	fisher_strand_p_value=0.462304	frequency=2.632e-01	ks_quality_p_value=1	major_base=C	major_cov=1/27	major_frequency=7.368e-01	minor_base=T	minor_cov=1/9	new_cov=1/9	polymorphism_frequency=2.632e-01	polymorphism_score=14.3	prediction=polymorphism	ref_cov=1/27	total_cov=2/36
RA	1748	.	NC_007793	1459013	0	T	A	bias_e_value=2267120	bias_p_value=0.777084	consensus_score=65.3	fisher_strand_p_value=0.452092	frequency=2.564e-01	ks_quality_p_value=0.910697	major_base=T	major_cov=1/28	major_frequency=7.436e-01	minor_base=A	minor_cov=1/9	new_cov=1/9	polymorphism_frequency=2.564e-01	polymorphism_score=19.4	prediction=polymorphism	ref_cov=1/28	total_cov=2/37
RA	1749	.	NC_007793	1459015	0	G	T	bias_e_value=2161100	bias_p_value=0.740746	consensus_score=72.8	fisher_strand_p_value=0.452092	frequency=2.564e-01	ks_quality_p_value=0.824834	major_base=G	major_cov=1/28	major_frequency=7.436e-01	minor_base=T	minor_cov=1/9	new_cov=1/9	polymorphism_frequency=2.564e-01	polymorphism_score=20.2	prediction=polymorphism	ref_cov=1/28	total_cov=2/37
RA	1750	.	NC_007793	1459058	0	T	C	bias_e_value=509972	bias_p_value=0.1748	consensus_score=63.6	fisher_strand_p_value=0.554443	frequency=2.619e-01	ks_quality_p_value=0.0755561	major_base=T	major_cov=3/28	major_frequency=7.381e-01	minor_base=C	minor_cov=0/11	new_cov=0/11	polymorphism_frequency=2.619e-01	polymorphism_score=17.0	prediction=polymorphism	ref_cov=3/28	total_cov=3/39
RA	1751	.	NC_007793	1459070	0	A	T	bias_e_value=170359	bias_p_value=0.0583927	consensus_score=63.3	fisher_strand_p_value=0.548797	frequency=2.647e-01	ks_quality_p_value=0.019153	major_base=A	major_cov=3/22	major_frequency=7.353e-01	minor_base=T	minor_cov=0/9	new_cov=0/9	polymorphism_frequency=2.647e-01	polymorphism_score=14.5	prediction=polymorphism	ref_cov=3/22	total_cov=3/31
RA	1752	.	NC_007793	1459072	0	G	A	bias_e_value=145035	bias_p_value=0.0497125	consensus_score=53.2	fisher_strand_p_value=0.557563	frequency=2.500e-01	ks_quality_p_value=0.0155039	major_base=G	major_cov=3/24	major_frequency=7.500e-01	minor_base=A	minor_cov=0/9	new_cov=0/9	polymorphism_frequency=2.500e-01	polymorphism_score=13.4	prediction=polymorphism	ref_cov=3/24	total_cov=3/33
RA	1753	.	NC_007793	1459073	0	T	A	bias_e_value=982520	bias_p_value=0.336771	consensus_score=63.1	fisher_strand_p_value=0.553094	frequency=2.571e-01	ks_quality_p_value=0.185947	major_base=T	major_cov=3/23	major_frequency=7.429e-01	minor_base=A	minor_cov=0/9	new_cov=0/9	polymorphism_frequency=2.571e-01	polymorphism_score=14.7	prediction=polymorphism	ref_cov=3/23	total_cov=3/32
RA	1754	.	NC_007793	1459074	0	T	C	bias_e_value=2390700	bias_p_value=0.819444	consensus_score=54.3	fisher_strand_p_value=0.553094	frequency=2.571e-01	ks_quality_p_value=0.836924	major_base=T	major_cov=3/23	major_frequency=7.429e-01	minor_base=C	minor_cov=0/9	new_cov=0/9	polymorphism_frequency=2.571e-01	polymorphism_score=11.0	prediction=polymorphism	ref_cov=3/23	total_cov=3/32
RA	1755	.	NC_007793	1459077	0	G	T	bias_e_value=2522820	bias_p_value=0.864729	consensus_score=63.9	fisher_strand_p_value=0.553094	frequency=2.571e-01	ks_quality_p_value=0.953264	major_base=G	major_cov=3/23	major_frequency=7.429e-01	minor_base=T	minor_cov=0/9	new_cov=0/9	polymorphism_frequency=2.571e-01	polymorphism_score=16.1	prediction=polymorphism	ref_cov=3/23	total_cov=3/32
RA	1756	.	NC_007793	1459082	0	G	T	bias_e_value=1352790	bias_p_value=0.463688	consensus_score=73.6	fisher_strand_p_value=0.542964	frequency=2.927e-01	ks_quality_p_value=0.305309	major_base=G	major_cov=3/26	major_frequency=7.073e-01	minor_base=T	minor_cov=0/12	new_cov=0/12	polymorphism_frequency=2.927e-01	polymorphism_score=24.5	prediction=polymorphism	ref_cov=3/26	total_cov=3/38
RA	1757	.	NC_007793	1459095	0	T	G	bias_e_value=2912880	bias_p_value=0.998428	consensus_score=86.9	fisher_strand_p_value=1	frequency=3.000e-01	ks_quality_p_value=0.944459	major_base=T	major_cov=3/39	major_frequency=7.000e-01	minor_base=G	minor_cov=1/17	new_cov=1/17	polymorphism_frequency=3.000e-01	polymorphism_score=42.4	prediction=polymorphism	ref_cov=3/39	total_cov=4/56
RA	1758	.	NC_007793	1459103	0	A	T	bias_e_value=2917410	bias_p_value=0.99998	consensus_score=93.5	fisher_strand_p_value=1	frequency=3.000e-01	ks_quality_p_value=0.993671	major_base=A	major_cov=3/39	major_frequency=7.000e-01	minor_base=T	minor_cov=1/17	new_cov=1/17	polymorphism_frequency=3.000e-01	polymorphism_score=36.7	prediction=polymorphism	ref_cov=3/39	total_cov=4/56
RA	1759	.	NC_007793	1459122	0	C	T	bias_e_value=2917110	bias_p_value=0.999877	consensus_score=47.3	fisher_strand_p_value=1	frequency=3.273e-01	ks_quality_p_value=0.984344	major_base=C	major_cov=3/34	major_frequency=6.727e-01	minor_base=T	minor_cov=1/17	new_cov=1/17	polymorphism_frequency=3.273e-01	polymorphism_score=33.6	prediction=polymorphism	ref_cov=3/34	total_cov=4/51
RA	1760	.	NC_007793	1462539	0	G	A	consensus_score=153.1	frequency=1	major_base=A	major_cov=3/52	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=3/52	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=3/52
RA	1761	.	NC_007793	1490274	0	T	C	consensus_score=63.8	frequency=1	major_base=C	major_cov=0/24	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/24	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/24
RA	1762	.	NC_007793	1495206	0	T	C	consensus_score=76.7	frequency=1	major_base=C	major_cov=0/30	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/30	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/30
RA	1763	.	NC_007793	1496033	0	T	A	consensus_score=313.9	frequency=1	major_base=A	major_cov=3/104	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=3/104	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=3/104
RA	1764	.	NC_007793	1499109	0	A	T	bias_e_value=2780580	bias_p_value=0.953079	consensus_score=31.2	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.70974	major_base=T	major_cov=12/2	major_frequency=9.333e-01	minor_base=C	minor_cov=1/0	new_cov=12/2	polymorphism_frequency=9.333e-01	polymorphism_score=-4.6	prediction=consensus	ref_cov=0/0	total_cov=13/2
RA	1765	.	NC_007793	1499394	0	C	A	consensus_score=41.6	frequency=1	major_base=A	major_cov=14/2	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=14/2	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=14/2
RA	1766	.	NC_007793	1499927	0	A	G	consensus_score=49.4	frequency=1	major_base=G	major_cov=7/13	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=7/13	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=7/13
RA	1767	.	NC_007793	1500816	0	A	G	bias_e_value=2917150	bias_p_value=0.99989	consensus_score=62.1	fisher_strand_p_value=1	frequency=2.381e-01	ks_quality_p_value=0.985229	major_base=A	major_cov=3/29	major_frequency=7.619e-01	minor_base=G	minor_cov=0/10	new_cov=0/10	polymorphism_frequency=2.381e-01	polymorphism_score=11.4	prediction=polymorphism	ref_cov=3/29	total_cov=3/44
RA	1768	.	NC_007793	1501031	0	T	C	consensus_score=633.6	frequency=1	major_base=C	major_cov=5/234	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=5/234	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=5/234
RA	1769	.	NC_007793	1501745	0	A	G	bias_e_value=0.0621524	bias_p_value=2.13035e-08	consensus_score=204.9	fisher_strand_p_value=1	frequency=2.087e-01	ks_quality_p_value=9.79756e-10	major_base=A	major_cov=1/90	major_frequency=7.913e-01	minor_base=G	minor_cov=0/24	new_cov=0/24	polymorphism_frequency=2.087e-01	polymorphism_score=34.7	prediction=polymorphism	ref_cov=1/90	total_cov=1/123
RA	1770	.	NC_007793	1506240	0	T	A	bias_e_value=165592	bias_p_value=0.0567588	consensus_score=149.0	fisher_strand_p_value=0.0959478	frequency=3.167e-01	ks_quality_p_value=0.105826	major_base=T	major_cov=75/7	major_frequency=6.833e-01	minor_base=A	minor_cov=38/0	new_cov=38/0	polymorphism_frequency=3.167e-01	polymorphism_score=82.9	prediction=polymorphism	ref_cov=75/7	total_cov=129/7
RA	1771	.	NC_007793	1506244	0	A	C	bias_e_value=39.2968	bias_p_value=1.34695e-05	consensus_score=46.1	fisher_strand_p_value=0.0709253	frequency=4.262e-01	ks_quality_p_value=1.27306e-05	major_base=A	major_cov=65/5	major_frequency=5.738e-01	minor_base=C	minor_cov=52/0	new_cov=52/0	polymorphism_frequency=4.262e-01	polymorphism_score=145.3	prediction=polymorphism	ref_cov=65/5	total_cov=117/5
RA	1772	.	NC_007793	1506245	0	C	G	bias_e_value=1204.6	bias_p_value=0.000412893	consensus_score=131.5	fisher_strand_p_value=0.156941	frequency=3.741e-01	ks_quality_p_value=0.00023471	major_base=C	major_cov=82/5	major_frequency=6.259e-01	minor_base=G	minor_cov=52/0	new_cov=52/0	polymorphism_frequency=3.741e-01	polymorphism_score=146.3	prediction=polymorphism	ref_cov=82/5	total_cov=135/5
RA	1773	.	NC_007793	1507090	0	G	A	bias_e_value=1082810	bias_p_value=0.371147	consensus_score=9.9	fisher_strand_p_value=0.183468	frequency=5.625e-01	ks_quality_p_value=0.645649	major_base=A	major_cov=18/0	major_frequency=5.625e-01	minor_base=G	minor_cov=12/2	new_cov=18/0	polymorphism_frequency=5.625e-01	polymorphism_score=22.6	prediction=polymorphism	ref_cov=12/2	total_cov=31/2
RA	1774	.	NC_007793	1517249	0	T	C	bias_e_value=2917470	bias_p_value=1	consensus_score=23.6	fisher_strand_p_value=1	frequency=3.333e-01	ks_quality_p_value=1	major_base=T	major_cov=1/19	major_frequency=6.667e-01	minor_base=C	minor_cov=0/10	new_cov=0/10	polymorphism_frequency=3.333e-01	polymorphism_score=12.5	prediction=polymorphism	ref_cov=1/19	total_cov=1/35
RA	1775	.	NC_007793	1519174	0	C	.	consensus_score=262.8	frequency=1	major_base=.	major_cov=3/64	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=3/64	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=3/64
RA	1776	.	NC_007793	1520645	0	C	T	bias_e_value=2785950	bias_p_value=0.954919	consensus_score=205.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.715168	major_base=T	major_cov=3/72	major_frequency=9.740e-01	minor_base=.	minor_cov=0/2	new_cov=3/72	polymorphism_frequency=9.740e-01	polymorphism_score=-1.5	prediction=consensus	ref_cov=0/0	total_cov=3/74
RA	1777	.	NC_007793	1530657	0	C	T	consensus_score=280.0	frequency=1	major_base=T	major_cov=3/98	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=3/98	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=3/98
RA	1778	.	NC_007793	1531501	0	A	C	consensus_score=227.7	frequency=1	major_base=C	major_cov=0/87	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/87	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/87
RA	1779	.	NC_007793	1533003	0	A	G	bias_e_value=2917470	bias_p_value=1	consensus_score=1215.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.99999	major_base=G	major_cov=4/447	major_frequency=9.978e-01	minor_base=T	minor_cov=0/1	new_cov=4/447	polymorphism_frequency=9.978e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=4/448
RA	1780	.	NC_007793	1533312	0	A	T	bias_e_value=2435400	bias_p_value=0.834765	consensus_score=478.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.483367	major_base=T	major_cov=0/172	major_frequency=9.942e-01	minor_base=.	minor_cov=0/1	new_cov=0/172	polymorphism_frequency=9.942e-01	polymorphism_score=-4.3	prediction=consensus	ref_cov=0/0	total_cov=0/173
RA	1781	.	NC_007793	1534172	0	G	T	bias_e_value=2906160	bias_p_value=0.996125	consensus_score=535.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.913266	major_base=T	major_cov=6/186	major_frequency=9.948e-01	minor_base=G	minor_cov=0/1	new_cov=6/186	polymorphism_frequency=9.948e-01	polymorphism_score=-5.0	prediction=consensus	ref_cov=0/1	total_cov=6/187
RA	1782	.	NC_007793	1534963	0	A	T	consensus_score=32.7	frequency=1	major_base=T	major_cov=14/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=14/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=14/0
RA	1783	.	NC_007793	1537347	0	C	T	bias_e_value=2917460	bias_p_value=0.999998	consensus_score=1879.2	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.997997	major_base=T	major_cov=13/656	major_frequency=9.970e-01	minor_base=A	minor_cov=0/2	new_cov=13/656	polymorphism_frequency=9.970e-01	polymorphism_score=-5.7	prediction=consensus	ref_cov=0/1	total_cov=13/659
RA	1784	.	NC_007793	1541574	0	T	A	bias_e_value=2735550	bias_p_value=0.937646	consensus_score=588.2	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.668322	major_base=A	major_cov=6/194	major_frequency=9.950e-01	minor_base=G	minor_cov=0/1	new_cov=6/194	polymorphism_frequency=9.950e-01	polymorphism_score=-6.0	prediction=consensus	ref_cov=0/0	total_cov=6/195
RA	1785	.	NC_007793	1544669	0	C	A	consensus_score=26.5	frequency=1	major_base=A	major_cov=0/11	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/11	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/11
RA	1786	.	NC_007793	1578194	0	A	G	consensus_score=10.9	frequency=1	major_base=G	major_cov=5/5	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=5/5	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=5/5
RA	1787	.	NC_007793	1578210	0	T	C	consensus_score=21.2	frequency=1	major_base=C	major_cov=6/7	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=6/7	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=6/7
RA	1788	.	NC_007793	1578227	0	G	A	consensus_score=21.3	frequency=1	major_base=A	major_cov=6/7	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=6/7	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=6/7
RA	1789	.	NC_007793	1578244	0	G	A	consensus_score=19.7	frequency=1	major_base=A	major_cov=5/7	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=5/7	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=5/7
RA	1790	.	NC_007793	1578362	0	G	A	consensus_score=28.4	frequency=1	major_base=A	major_cov=2/11	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/11	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/11
RA	1791	.	NC_007793	1578410	0	T	C	bias_e_value=2914870	bias_p_value=0.999107	consensus_score=44.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.958048	major_base=C	major_cov=1/19	major_frequency=9.524e-01	minor_base=T	minor_cov=0/1	new_cov=1/19	polymorphism_frequency=9.524e-01	polymorphism_score=-4.5	prediction=consensus	ref_cov=0/1	total_cov=1/20
RA	1792	.	NC_007793	1578476	0	A	T	consensus_score=27.1	frequency=1	major_base=T	major_cov=1/14	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/14	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/14
RA	1793	.	NC_007793	1578485	0	A	G	consensus_score=23.1	frequency=1	major_base=G	major_cov=1/13	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/13	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/13
RA	1794	.	NC_007793	1578488	0	T	C	consensus_score=11.6	frequency=1	major_base=C	major_cov=1/8	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/8	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/8
RA	1795	.	NC_007793	1578489	0	A	G	consensus_score=10.9	frequency=1	major_base=G	major_cov=1/8	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/8	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/8
RA	1796	.	NC_007793	1578490	0	A	T	consensus_score=11.7	frequency=1	major_base=T	major_cov=1/8	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/8	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/8
RA	1797	.	NC_007793	1578544	0	G	A	consensus_score=24.1	frequency=1	major_base=A	major_cov=1/14	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/14	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/14
RA	1798	.	NC_007793	1578557	0	A	G	consensus_score=44.2	frequency=1	major_base=G	major_cov=1/23	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/23	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/23
RA	1799	.	NC_007793	1578574	0	T	C	consensus_score=52.8	frequency=1	major_base=C	major_cov=1/25	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/25	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/25
RA	1800	.	NC_007793	1578590	0	G	A	consensus_score=43.2	frequency=1	major_base=A	major_cov=1/21	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/21	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/21
RA	1801	.	NC_007793	1578598	0	C	A	consensus_score=46.2	frequency=1	major_base=A	major_cov=1/21	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/21	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/21
RA	1802	.	NC_007793	1578686	0	A	G	consensus_score=11.6	frequency=1	major_base=G	major_cov=0/7	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/7	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/7
RA	1803	.	NC_007793	1578771	0	C	T	consensus_score=20.7	frequency=1	major_base=T	major_cov=4/6	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=4/6	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=4/6
RA	1804	.	NC_007793	1578785	0	C	T	consensus_score=39.1	frequency=1	major_base=T	major_cov=8/8	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=8/8	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=8/8
RA	1805	.	NC_007793	1578801	0	T	C	bias_e_value=2407800	bias_p_value=0.825304	consensus_score=39.9	fisher_strand_p_value=0.470588	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=7/9	major_frequency=9.412e-01	minor_base=A	minor_cov=1/0	new_cov=7/9	polymorphism_frequency=9.412e-01	polymorphism_score=-5.6	prediction=consensus	ref_cov=0/0	total_cov=8/9
RA	1806	.	NC_007793	1578853	0	A	G	consensus_score=68.8	frequency=1	major_base=G	major_cov=9/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=9/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=9/19
RA	1807	.	NC_007793	1578951	0	T	A	consensus_score=37.6	frequency=1	major_base=A	major_cov=4/11	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=4/11	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=4/11
RA	1808	.	NC_007793	1578958	0	A	G	consensus_score=39.1	frequency=1	major_base=G	major_cov=4/13	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=4/13	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=4/13
RA	1809	.	NC_007793	1578993	0	G	A	consensus_score=29.4	frequency=1	major_base=A	major_cov=2/10	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/10	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/10
RA	1810	.	NC_007793	1579043	0	T	A	bias_e_value=2264250	bias_p_value=0.776099	consensus_score=24.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.410611	major_base=A	major_cov=0/13	major_frequency=9.286e-01	minor_base=G	minor_cov=0/1	new_cov=0/13	polymorphism_frequency=9.286e-01	polymorphism_score=-4.6	prediction=consensus	ref_cov=0/0	total_cov=0/14
RA	1811	.	NC_007793	1579182	0	T	A	consensus_score=10.3	frequency=1	major_base=A	major_cov=2/4	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/4	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/4
RA	1812	.	NC_007793	1579248	0	C	T	bias_e_value=643877	bias_p_value=0.220697	consensus_score=86.6	fisher_strand_p_value=0.0571429	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=1/33	major_frequency=9.714e-01	minor_base=C	minor_cov=1/0	new_cov=1/33	polymorphism_frequency=9.714e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=2/33
RA	1813	.	NC_007793	1579283	0	G	A	bias_e_value=776606	bias_p_value=0.266192	consensus_score=46.9	fisher_strand_p_value=0.075318	frequency=6.977e-01	ks_quality_p_value=0.980047	major_base=A	major_cov=1/29	major_frequency=6.977e-01	minor_base=G	minor_cov=3/10	new_cov=1/29	polymorphism_frequency=6.977e-01	polymorphism_score=19.4	prediction=polymorphism	ref_cov=3/10	total_cov=4/40
RA	1814	.	NC_007793	1579335	0	A	G	consensus_score=85.8	frequency=1	major_base=G	major_cov=12/22	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=12/22	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=12/22
RA	1815	.	NC_007793	1579338	0	A	G	consensus_score=82.4	frequency=1	major_base=G	major_cov=12/21	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=12/21	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=12/21
RA	1816	.	NC_007793	1579374	0	C	T	bias_e_value=250915	bias_p_value=0.0860042	consensus_score=68.3	fisher_strand_p_value=0.0169355	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=6/23	major_frequency=9.062e-01	minor_base=C	minor_cov=3/0	new_cov=6/23	polymorphism_frequency=9.062e-01	polymorphism_score=-2.7	prediction=consensus	ref_cov=3/0	total_cov=9/23
RA	1817	.	NC_007793	1579396	0	A	T	consensus_score=50.2	frequency=1	major_base=T	major_cov=1/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/19
RA	1818	.	NC_007793	1579411	0	G	A	consensus_score=49.1	frequency=1	major_base=A	major_cov=1/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/19
RA	1819	.	NC_007793	1579416	0	T	A	consensus_score=50.4	frequency=1	major_base=A	major_cov=1/18	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/18	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/18
RA	1820	.	NC_007793	1579425	0	C	T	consensus_score=38.2	frequency=1	major_base=T	major_cov=1/15	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/15	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/15
RA	1821	.	NC_007793	1579426	0	A	T	consensus_score=41.5	frequency=1	major_base=T	major_cov=1/15	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/15	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/15
RA	1822	.	NC_007793	1579427	0	A	G	consensus_score=32.3	frequency=1	major_base=G	major_cov=1/15	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/15	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/15
RA	1823	.	NC_007793	1579434	0	A	G	consensus_score=29.8	frequency=1	major_base=G	major_cov=1/13	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/13	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/13
RA	1824	.	NC_007793	1579467	0	G	A	consensus_score=13.8	frequency=1	major_base=A	major_cov=1/6	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/6	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/6
RA	1825	.	NC_007793	1579515	0	G	T	consensus_score=16.8	frequency=1	major_base=T	major_cov=0/8	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/8	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/8
RA	1826	.	NC_007793	1579527	0	A	T	consensus_score=15.8	frequency=1	major_base=T	major_cov=0/8	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/8	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/8
RA	1827	.	NC_007793	1579528	0	C	G	consensus_score=15.4	frequency=1	major_base=G	major_cov=0/8	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/8	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/8
RA	1828	.	NC_007793	1579532	0	T	C	consensus_score=17.0	frequency=1	major_base=C	major_cov=0/8	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/8	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/8
RA	1829	.	NC_007793	1579634	0	A	G	consensus_score=12.6	frequency=1	major_base=G	major_cov=0/7	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/7	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/7
RA	1830	.	NC_007793	1579638	0	A	T	consensus_score=14.6	frequency=1	major_base=T	major_cov=0/7	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/7	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/7
RA	1831	.	NC_007793	1579641	0	A	G	consensus_score=12.0	frequency=1	major_base=G	major_cov=0/7	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/7	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/7
RA	1832	.	NC_007793	1579818	0	A	G	consensus_score=44.9	frequency=1	major_base=G	major_cov=0/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/19
RA	1833	.	NC_007793	1579835	0	T	G	bias_e_value=2917470	bias_p_value=1	consensus_score=-0.0	fisher_strand_p_value=1	frequency=4.286e-01	ks_quality_p_value=1	major_base=T	major_cov=0/8	major_frequency=5.714e-01	minor_base=G	minor_cov=0/6	new_cov=0/6	polymorphism_frequency=4.286e-01	polymorphism_score=12.6	prediction=polymorphism	ref_cov=0/8	total_cov=0/14
RA	1834	.	NC_007793	1579855	0	C	A	bias_e_value=2917470	bias_p_value=1	consensus_score=-4.7	fisher_strand_p_value=1	frequency=5.000e-01	ks_quality_p_value=1	major_base=A	major_cov=0/9	major_frequency=5.000e-01	minor_base=C	minor_cov=1/8	new_cov=0/9	polymorphism_frequency=5.000e-01	polymorphism_score=19.4	prediction=polymorphism	ref_cov=1/8	total_cov=1/17
RA	1835	.	NC_007793	1579861	0	C	A	bias_e_value=2913940	bias_p_value=0.998791	consensus_score=-1.0	fisher_strand_p_value=1	frequency=4.444e-01	ks_quality_p_value=0.951229	major_base=C	major_cov=1/9	major_frequency=5.556e-01	minor_base=A	minor_cov=0/8	new_cov=0/8	polymorphism_frequency=4.444e-01	polymorphism_score=17.7	prediction=polymorphism	ref_cov=1/9	total_cov=1/17
RA	1836	.	NC_007793	1579891	0	A	T	bias_e_value=2901870	bias_p_value=0.994654	consensus_score=1.1	fisher_strand_p_value=1	frequency=4.286e-01	ks_quality_p_value=0.898397	major_base=A	major_cov=1/7	major_frequency=5.714e-01	minor_base=T	minor_cov=0/6	new_cov=0/6	polymorphism_frequency=4.286e-01	polymorphism_score=10.5	prediction=polymorphism	ref_cov=1/7	total_cov=1/13
RA	1837	.	NC_007793	1579906	0	G	A	bias_e_value=2917470	bias_p_value=1	consensus_score=-3.0	fisher_strand_p_value=1	frequency=4.706e-01	ks_quality_p_value=1	major_base=G	major_cov=1/8	major_frequency=5.294e-01	minor_base=A	minor_cov=1/7	new_cov=1/7	polymorphism_frequency=4.706e-01	polymorphism_score=13.8	prediction=polymorphism	ref_cov=1/8	total_cov=2/15
RA	1838	.	NC_007793	1579908	0	G	C	bias_e_value=2917160	bias_p_value=0.999893	consensus_score=1.9	fisher_strand_p_value=1	frequency=4.706e-01	ks_quality_p_value=0.985402	major_base=G	major_cov=1/8	major_frequency=5.294e-01	minor_base=C	minor_cov=1/7	new_cov=1/7	polymorphism_frequency=4.706e-01	polymorphism_score=18.9	prediction=polymorphism	ref_cov=1/8	total_cov=2/15
RA	1839	.	NC_007793	1579911	0	C	A	bias_e_value=2700360	bias_p_value=0.925583	consensus_score=1.4	fisher_strand_p_value=1	frequency=4.375e-01	ks_quality_p_value=0.639909	major_base=C	major_cov=1/8	major_frequency=5.625e-01	minor_base=A	minor_cov=0/7	new_cov=0/7	polymorphism_frequency=4.375e-01	polymorphism_score=14.3	prediction=polymorphism	ref_cov=1/8	total_cov=2/15
RA	1840	.	NC_007793	1579914	0	C	G	bias_e_value=2917470	bias_p_value=1	consensus_score=1.2	fisher_strand_p_value=1	frequency=4.706e-01	ks_quality_p_value=1	major_base=C	major_cov=1/8	major_frequency=5.294e-01	minor_base=G	minor_cov=1/7	new_cov=1/7	polymorphism_frequency=4.706e-01	polymorphism_score=16.8	prediction=polymorphism	ref_cov=1/8	total_cov=2/15
RA	1841	.	NC_007793	1579918	0	C	A	bias_e_value=2570170	bias_p_value=0.880959	consensus_score=-4.7	fisher_strand_p_value=0.559571	frequency=5.652e-01	ks_quality_p_value=0.989355	major_base=A	major_cov=1/12	major_frequency=5.652e-01	minor_base=C	minor_cov=2/8	new_cov=1/12	polymorphism_frequency=5.652e-01	polymorphism_score=22.1	prediction=polymorphism	ref_cov=2/8	total_cov=3/20
RA	1842	.	NC_007793	1579927	0	A	T	bias_e_value=1741430	bias_p_value=0.596899	consensus_score=-4.6	fisher_strand_p_value=0.553383	frequency=5.714e-01	ks_quality_p_value=0.452191	major_base=T	major_cov=1/11	major_frequency=5.714e-01	minor_base=A	minor_cov=2/7	new_cov=1/11	polymorphism_frequency=5.714e-01	polymorphism_score=19.3	prediction=polymorphism	ref_cov=2/7	total_cov=3/18
RA	1843	.	NC_007793	1579929	0	G	T	bias_e_value=2277770	bias_p_value=0.780734	consensus_score=-6.1	fisher_strand_p_value=0.553383	frequency=5.714e-01	ks_quality_p_value=0.751477	major_base=T	major_cov=1/11	major_frequency=5.714e-01	minor_base=G	minor_cov=2/7	new_cov=1/11	polymorphism_frequency=5.714e-01	polymorphism_score=21.3	prediction=polymorphism	ref_cov=2/7	total_cov=3/18
RA	1844	.	NC_007793	1579930	0	T	C	bias_e_value=2277770	bias_p_value=0.780734	consensus_score=-4.6	fisher_strand_p_value=0.553383	frequency=5.714e-01	ks_quality_p_value=0.751477	major_base=C	major_cov=1/11	major_frequency=5.714e-01	minor_base=T	minor_cov=2/7	new_cov=1/11	polymorphism_frequency=5.714e-01	polymorphism_score=15.3	prediction=polymorphism	ref_cov=2/7	total_cov=3/18
RA	1845	.	NC_007793	1579932	0	A	T	bias_e_value=2354310	bias_p_value=0.806968	consensus_score=-4.4	fisher_strand_p_value=0.571429	frequency=5.455e-01	ks_quality_p_value=0.782349	major_base=T	major_cov=1/11	major_frequency=5.455e-01	minor_base=A	minor_cov=2/8	new_cov=1/11	polymorphism_frequency=5.455e-01	polymorphism_score=21.4	prediction=polymorphism	ref_cov=2/8	total_cov=3/19
RA	1846	.	NC_007793	1579933	0	A	T	bias_e_value=2454680	bias_p_value=0.841374	consensus_score=-5.8	fisher_strand_p_value=0.571429	frequency=5.455e-01	ks_quality_p_value=0.862013	major_base=T	major_cov=1/11	major_frequency=5.455e-01	minor_base=A	minor_cov=2/8	new_cov=1/11	polymorphism_frequency=5.455e-01	polymorphism_score=20.4	prediction=polymorphism	ref_cov=2/8	total_cov=3/19
RA	1847	.	NC_007793	1579936	0	T	C	consensus_score=44.3	frequency=1	major_base=C	major_cov=2/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/19
RA	1848	.	NC_007793	1579960	0	C	T	bias_e_value=1406910	bias_p_value=0.482236	consensus_score=-4.2	fisher_strand_p_value=1	frequency=4.667e-01	ks_quality_p_value=0.176274	major_base=C	major_cov=1/7	major_frequency=5.333e-01	minor_base=T	minor_cov=1/6	new_cov=1/6	polymorphism_frequency=4.667e-01	polymorphism_score=11.0	prediction=polymorphism	ref_cov=1/7	total_cov=2/13
RA	1849	.	NC_007793	1579978	0	T	C	consensus_score=24.7	frequency=1	major_base=C	major_cov=2/13	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/13	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/13
RA	1850	.	NC_007793	1580274	0	T	C	consensus_score=10.2	frequency=1	major_base=C	major_cov=0/9	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/9	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/9
RA	1851	.	NC_007793	1580299	0	C	T	consensus_score=10.3	frequency=1	major_base=T	major_cov=0/9	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/9	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/9
RA	1852	.	NC_007793	1580300	0	G	A	consensus_score=10.1	frequency=1	major_base=A	major_cov=0/9	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/9	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/9
RA	1853	.	NC_007793	1580638	0	G	A	consensus_score=40.4	frequency=1	major_base=A	major_cov=2/14	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/14	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/14
RA	1854	.	NC_007793	1580674	0	A	G	consensus_score=34.3	frequency=1	major_base=G	major_cov=1/15	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/15	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/15
RA	1855	.	NC_007793	1580695	0	G	A	bias_e_value=2634860	bias_p_value=0.903133	consensus_score=60.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.593487	major_base=A	major_cov=1/22	major_frequency=9.583e-01	minor_base=T	minor_cov=0/1	new_cov=1/22	polymorphism_frequency=9.583e-01	polymorphism_score=-4.2	prediction=consensus	ref_cov=0/0	total_cov=1/23
RA	1856	.	NC_007793	1580698	0	G	A	consensus_score=59.5	frequency=1	major_base=A	major_cov=0/23	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/23	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/23
RA	1857	.	NC_007793	1580734	0	C	T	bias_e_value=2527540	bias_p_value=0.866346	consensus_score=34.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.52978	major_base=T	major_cov=1/16	major_frequency=8.500e-01	minor_base=C	minor_cov=0/3	new_cov=1/16	polymorphism_frequency=8.500e-01	polymorphism_score=-0.8	prediction=consensus	ref_cov=0/3	total_cov=1/19
RA	1858	.	NC_007793	1580737	0	A	T	bias_e_value=2527540	bias_p_value=0.866346	consensus_score=34.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.52978	major_base=T	major_cov=1/16	major_frequency=8.500e-01	minor_base=C	minor_cov=0/3	new_cov=1/16	polymorphism_frequency=8.500e-01	polymorphism_score=-0.8	prediction=consensus	ref_cov=0/0	total_cov=1/19
RA	1859	.	NC_007793	1580743	0	T	C	consensus_score=46.0	frequency=1	major_base=C	major_cov=2/16	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/16	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/16
RA	1860	.	NC_007793	1580758	0	T	C	consensus_score=47.7	frequency=1	major_base=C	major_cov=2/17	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/17	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/17
RA	1861	.	NC_007793	1580759	0	G	A	bias_e_value=2917470	bias_p_value=1	consensus_score=33.2	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=2/14	major_frequency=8.421e-01	minor_base=G	minor_cov=0/3	new_cov=2/14	polymorphism_frequency=8.421e-01	polymorphism_score=-0.6	prediction=consensus	ref_cov=0/3	total_cov=2/17
RA	1862	.	NC_007793	1586582	0	T	A	consensus_score=10.0	frequency=1	major_base=A	major_cov=3/3	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=3/3	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=3/3
RA	1863	.	NC_007793	1586594	0	C	T	consensus_score=10.4	frequency=1	major_base=T	major_cov=4/2	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=4/2	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=4/2
RA	1864	.	NC_007793	1586597	0	C	A	consensus_score=10.5	frequency=1	major_base=A	major_cov=4/2	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=4/2	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=4/2
RA	1865	.	NC_007793	1586615	0	C	T	consensus_score=11.3	frequency=1	major_base=T	major_cov=4/2	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=4/2	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=4/2
RA	1866	.	NC_007793	1589875	0	T	C	consensus_score=97.6	frequency=1	major_base=C	major_cov=37/3	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=37/3	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=37/3
RA	1867	.	NC_007793	1589876	0	A	G	bias_e_value=172474	bias_p_value=0.0591177	consensus_score=95.7	fisher_strand_p_value=0.075	frequency=1	ks_quality_p_value=0.142274	major_base=G	major_cov=37/2	major_frequency=9.750e-01	minor_base=A	minor_cov=0/1	new_cov=37/2	polymorphism_frequency=9.750e-01	polymorphism_score=-4.7	prediction=consensus	ref_cov=0/1	total_cov=37/3
RA	1868	.	NC_007793	1589898	0	A	G	bias_e_value=2917470	bias_p_value=1	consensus_score=124.2	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=46/6	major_frequency=9.630e-01	minor_base=A	minor_cov=2/0	new_cov=46/6	polymorphism_frequency=9.630e-01	polymorphism_score=-4.7	prediction=consensus	ref_cov=2/0	total_cov=49/6
RA	1869	.	NC_007793	1589916	0	T	A	consensus_score=169.6	frequency=1	major_base=A	major_cov=52/8	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=52/8	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=52/8
RA	1870	.	NC_007793	1589937	0	T	C	consensus_score=129.1	frequency=1	major_base=C	major_cov=46/9	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=46/9	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=46/9
RA	1871	.	NC_007793	1589939	0	A	G	bias_e_value=2884970	bias_p_value=0.988861	consensus_score=118.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.854505	major_base=G	major_cov=44/9	major_frequency=9.815e-01	minor_base=C	minor_cov=1/0	new_cov=44/9	polymorphism_frequency=9.815e-01	polymorphism_score=-5.6	prediction=consensus	ref_cov=0/0	total_cov=45/9
RA	1872	.	NC_007793	1589942	0	C	T	bias_e_value=2004250	bias_p_value=0.686982	consensus_score=97.8	fisher_strand_p_value=0.32208	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=33/9	major_frequency=8.571e-01	minor_base=G	minor_cov=7/0	new_cov=33/9	polymorphism_frequency=8.571e-01	polymorphism_score=-4.9	prediction=consensus	ref_cov=2/0	total_cov=44/9
RA	1873	.	NC_007793	1589954	0	A	C	consensus_score=124.1	frequency=1	major_base=C	major_cov=31/16	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=31/16	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=31/16
RA	1874	.	NC_007793	1589996	0	G	A	consensus_score=71.0	frequency=1	major_base=A	major_cov=10/16	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=10/16	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=10/16
RA	1875	.	NC_007793	1590050	0	C	T	consensus_score=62.4	frequency=1	major_base=T	major_cov=13/11	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=13/11	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=13/11
RA	1876	.	NC_007793	1590116	0	T	C	consensus_score=38.4	frequency=1	major_base=C	major_cov=9/7	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=9/7	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=9/7
RA	1877	.	NC_007793	1590197	0	T	A	consensus_score=196.3	frequency=1	major_base=A	major_cov=32/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=32/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=32/38
RA	1878	.	NC_007793	1590272	0	T	A	consensus_score=88.5	frequency=1	major_base=A	major_cov=9/23	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=9/23	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=9/23
RA	1879	.	NC_007793	1590287	0	G	T	consensus_score=82.4	frequency=1	major_base=T	major_cov=9/21	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=9/21	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=9/21
RA	1880	.	NC_007793	1590291	0	A	T	consensus_score=73.2	frequency=1	major_base=T	major_cov=8/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=8/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=8/20
RA	1881	.	NC_007793	1590292	0	T	C	consensus_score=73.5	frequency=1	major_base=C	major_cov=8/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=8/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=8/20
RA	1882	.	NC_007793	1590311	0	A	G	consensus_score=60.9	frequency=1	major_base=G	major_cov=8/16	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=8/16	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=8/16
RA	1883	.	NC_007793	1590340	0	A	G	consensus_score=57.5	frequency=1	major_base=G	major_cov=9/14	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=9/14	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=9/14
RA	1884	.	NC_007793	1590361	0	A	T	consensus_score=59.2	frequency=1	major_base=T	major_cov=11/11	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=11/11	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=11/11
RA	1885	.	NC_007793	1590369	0	A	C	consensus_score=54.7	frequency=1	major_base=C	major_cov=12/10	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=12/10	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=12/10
RA	1886	.	NC_007793	1590403	0	T	G	consensus_score=143.6	frequency=1	major_base=G	major_cov=38/16	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=38/16	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=38/16
RA	1887	.	NC_007793	1590408	0	T	C	bias_e_value=1895960	bias_p_value=0.649866	consensus_score=140.2	fisher_strand_p_value=0.290909	frequency=1	ks_quality_p_value=0.999327	major_base=C	major_cov=39/15	major_frequency=9.818e-01	minor_base=T	minor_cov=0/1	new_cov=39/15	polymorphism_frequency=9.818e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=39/16
RA	1888	.	NC_007793	1590447	0	C	G	consensus_score=147.5	frequency=1	major_base=G	major_cov=34/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=34/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=34/20
RA	1889	.	NC_007793	1590508	0	C	T	consensus_score=150.4	frequency=1	major_base=T	major_cov=12/44	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=12/44	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=12/44
RA	1890	.	NC_007793	1590639	0	C	T	consensus_score=41.0	frequency=1	major_base=T	major_cov=14/2	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=14/2	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=14/2
RA	1891	.	NC_007793	1590662	0	A	T	consensus_score=41.7	frequency=1	major_base=T	major_cov=14/2	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=14/2	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=14/2
RA	1892	.	NC_007793	1590663	0	C	T	consensus_score=39.8	frequency=1	major_base=T	major_cov=14/2	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=14/2	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=14/2
RA	1893	.	NC_007793	1590674	0	A	C	consensus_score=15.2	frequency=1	major_base=C	major_cov=7/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=7/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=7/1
RA	1894	.	NC_007793	1593165	1	.	T	bias_e_value=1741080	bias_p_value=0.596776	consensus_score=76.6	fisher_strand_p_value=0.359606	frequency=1	ks_quality_p_value=0.695612	major_base=T	major_cov=3/24	major_frequency=9.000e-01	minor_base=.	minor_cov=1/2	new_cov=3/24	polymorphism_frequency=9.000e-01	polymorphism_score=2.7	prediction=consensus	ref_cov=1/2	total_cov=4/26
RA	1895	.	NC_007793	1593380	0	T	C	consensus_score=55.8	frequency=1	major_base=C	major_cov=6/16	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=6/16	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=6/16
RA	1896	.	NC_007793	1598172	0	A	G	bias_e_value=2677790	bias_p_value=0.917847	consensus_score=533.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.62308	major_base=G	major_cov=2/199	major_frequency=9.950e-01	minor_base=A	minor_cov=0/1	new_cov=2/199	polymorphism_frequency=9.950e-01	polymorphism_score=-5.6	prediction=consensus	ref_cov=0/1	total_cov=2/200
RA	1897	.	NC_007793	1602262	0	T	C	consensus_score=207.5	frequency=1	major_base=C	major_cov=1/80	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/80	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/80
RA	1898	.	NC_007793	1608421	0	T	C	consensus_score=234.2	frequency=1	major_base=C	major_cov=88/3	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=88/3	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=88/3
RA	1899	.	NC_007793	1609096	0	T	C	bias_e_value=173010	bias_p_value=0.0593013	consensus_score=161.7	fisher_strand_p_value=0.0452338	frequency=5.890e-01	ks_quality_p_value=0.236792	major_base=C	major_cov=277/1	major_frequency=5.890e-01	minor_base=T	minor_cov=189/5	new_cov=277/1	polymorphism_frequency=5.890e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=189/5	total_cov=467/6
RA	1900	.	NC_007793	1609097	0	A	G	bias_e_value=679.177	bias_p_value=0.000232797	consensus_score=190.2	fisher_strand_p_value=0.0287837	frequency=5.860e-01	ks_quality_p_value=0.000683291	major_base=G	major_cov=252/0	major_frequency=5.860e-01	minor_base=A	minor_cov=174/4	new_cov=252/0	polymorphism_frequency=5.860e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=174/4	total_cov=427/4
RA	1901	.	NC_007793	1618244	0	T	C	consensus_score=520.6	frequency=1	major_base=C	major_cov=2/192	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/192	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/192
RA	1902	.	NC_007793	1620270	0	A	G	consensus_score=284.6	frequency=1	major_base=G	major_cov=9/98	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=9/98	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=9/98
RA	1903	.	NC_007793	1622675	0	C	T	consensus_score=247.6	frequency=1	major_base=T	major_cov=1/89	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/89	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/89
RA	1904	.	NC_007793	1624502	0	T	C	bias_e_value=2917440	bias_p_value=0.999992	consensus_score=626.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.995932	major_base=C	major_cov=2/219	major_frequency=9.955e-01	minor_base=T	minor_cov=0/1	new_cov=2/219	polymorphism_frequency=9.955e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=2/220
RA	1905	.	NC_007793	1625515	0	C	T	bias_e_value=2618700	bias_p_value=0.897593	consensus_score=188.1	fisher_strand_p_value=1	frequency=6.189e-01	ks_quality_p_value=0.583045	major_base=T	major_cov=0/177	major_frequency=6.189e-01	minor_base=C	minor_cov=0/109	new_cov=0/177	polymorphism_frequency=6.189e-01	polymorphism_score=216.3	prediction=polymorphism	ref_cov=0/109	total_cov=0/288
RA	1906	.	NC_007793	1627860	0	T	C	consensus_score=143.9	frequency=1	major_base=C	major_cov=1/52	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/52	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/52
RA	1907	.	NC_007793	1628171	0	C	T	consensus_score=334.3	frequency=1	major_base=T	major_cov=5/114	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=5/114	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=5/114
RA	1908	.	NC_007793	1630832	0	C	T	consensus_score=36.9	frequency=1	major_base=T	major_cov=0/16	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/16	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/16
RA	1909	.	NC_007793	1630876	0	C	T	bias_e_value=2917470	bias_p_value=1	consensus_score=44.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=1/18	major_frequency=9.500e-01	minor_base=G	minor_cov=0/1	new_cov=1/18	polymorphism_frequency=9.500e-01	polymorphism_score=-6.0	prediction=consensus	ref_cov=0/0	total_cov=1/19
RA	1910	.	NC_007793	1631061	0	C	T	consensus_score=183.4	frequency=1	major_base=T	major_cov=1/66	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/66	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/66
RA	1911	.	NC_007793	1631153	0	G	A	consensus_score=160.9	frequency=1	major_base=A	major_cov=0/58	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/58	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/58
RA	1912	.	NC_007793	1631164	0	A	G	consensus_score=196.0	frequency=1	major_base=G	major_cov=0/74	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/74	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/74
RA	1913	.	NC_007793	1631232	0	C	G	consensus_score=231.3	frequency=1	major_base=G	major_cov=0/89	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/89	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/89
RA	1914	.	NC_007793	1631245	0	A	G	consensus_score=235.6	frequency=1	major_base=G	major_cov=0/89	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/89	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/89
RA	1915	.	NC_007793	1631272	0	A	G	consensus_score=128.9	frequency=1	major_base=G	major_cov=0/51	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/51	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/51
RA	1916	.	NC_007793	1631278	0	G	T	consensus_score=117.4	frequency=1	major_base=T	major_cov=0/44	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/44	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/44
RA	1917	.	NC_007793	1631368	0	C	T	consensus_score=187.9	frequency=1	major_base=T	major_cov=7/63	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=7/63	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=7/63
RA	1918	.	NC_007793	1631540	0	C	T	bias_e_value=2917030	bias_p_value=0.99985	consensus_score=286.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.982706	major_base=T	major_cov=5/100	major_frequency=9.813e-01	minor_base=C	minor_cov=0/2	new_cov=5/100	polymorphism_frequency=9.813e-01	polymorphism_score=-4.9	prediction=consensus	ref_cov=0/2	total_cov=5/102
RA	1919	.	NC_007793	1631629	0	A	G	consensus_score=166.6	frequency=1	major_base=G	major_cov=1/65	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/65	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/65
RA	1920	.	NC_007793	1631843	0	T	C	consensus_score=210.3	frequency=1	major_base=C	major_cov=5/75	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=5/75	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=5/75
RA	1921	.	NC_007793	1631930	0	G	A	consensus_score=109.3	frequency=1	major_base=A	major_cov=1/39	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/39	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/39
RA	1922	.	NC_007793	1632043	0	T	C	consensus_score=39.6	frequency=1	major_base=C	major_cov=0/17	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/17	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/17
RA	1923	.	NC_007793	1632325	0	C	T	consensus_score=22.4	frequency=1	major_base=T	major_cov=2/8	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/8	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/8
RA	1924	.	NC_007793	1632327	0	T	C	consensus_score=22.1	frequency=1	major_base=C	major_cov=2/8	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/8	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/8
RA	1925	.	NC_007793	1632332	0	T	A	consensus_score=26.3	frequency=1	major_base=A	major_cov=2/9	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/9	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/9
RA	1926	.	NC_007793	1632333	0	A	G	bias_e_value=2917470	bias_p_value=1	consensus_score=19.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=2/8	major_frequency=9.091e-01	minor_base=A	minor_cov=0/1	new_cov=2/8	polymorphism_frequency=9.091e-01	polymorphism_score=-5.4	prediction=consensus	ref_cov=0/1	total_cov=2/9
RA	1927	.	NC_007793	1632335	0	C	A	consensus_score=26.3	frequency=1	major_base=A	major_cov=2/9	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/9	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/9
RA	1928	.	NC_007793	1632339	0	G	A	consensus_score=26.6	frequency=1	major_base=A	major_cov=2/9	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/9	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/9
RA	1929	.	NC_007793	1632340	0	T	A	consensus_score=26.3	frequency=1	major_base=A	major_cov=2/9	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/9	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/9
RA	1930	.	NC_007793	1632345	0	T	G	consensus_score=39.5	frequency=1	major_base=G	major_cov=2/15	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/15	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/15
RA	1931	.	NC_007793	1632353	0	T	C	consensus_score=45.3	frequency=1	major_base=C	major_cov=2/16	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/16	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/16
RA	1932	.	NC_007793	1633809	0	G	A	consensus_score=27.0	frequency=1	major_base=A	major_cov=0/12	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/12	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/12
RA	1933	.	NC_007793	1634392	0	T	C	consensus_score=13.5	frequency=1	major_base=C	major_cov=1/6	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/6	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/6
RA	1934	.	NC_007793	1634430	0	T	C	consensus_score=29.2	frequency=1	major_base=C	major_cov=4/9	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=4/9	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=4/9
RA	1935	.	NC_007793	1634467	0	G	A	consensus_score=25.9	frequency=1	major_base=A	major_cov=4/7	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=4/7	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=4/7
RA	1936	.	NC_007793	1635367	0	A	G	consensus_score=21.0	frequency=1	major_base=G	major_cov=0/11	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/11	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/11
RA	1937	.	NC_007793	1635370	0	A	C	consensus_score=25.4	frequency=1	major_base=C	major_cov=0/11	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/11	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/11
RA	1938	.	NC_007793	1635409	0	T	C	consensus_score=25.4	frequency=1	major_base=C	major_cov=0/11	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/11	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/11
RA	1939	.	NC_007793	1635412	0	G	A	consensus_score=26.8	frequency=1	major_base=A	major_cov=0/11	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/11	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/11
RA	1940	.	NC_007793	1638466	0	C	A	consensus_score=11.6	frequency=1	major_base=A	major_cov=1/5	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/5	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/5
RA	1941	.	NC_007793	1644224	0	C	T	consensus_score=59.8	frequency=1	major_base=T	major_cov=1/22	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/22	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/22
RA	1942	.	NC_007793	1644501	0	T	C	bias_e_value=2910470	bias_p_value=0.997602	consensus_score=2181.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.931555	major_base=C	major_cov=1/758	major_frequency=9.987e-01	minor_base=T	minor_cov=0/1	new_cov=1/758	polymorphism_frequency=9.987e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=1/759
RA	1943	.	NC_007793	1658052	0	T	A	bias_e_value=2011930	bias_p_value=0.689615	consensus_score=89.0	fisher_strand_p_value=1	frequency=3.643e-01	ks_quality_p_value=0.324411	major_base=T	major_cov=0/82	major_frequency=6.357e-01	minor_base=A	minor_cov=0/47	new_cov=0/47	polymorphism_frequency=3.643e-01	polymorphism_score=118.8	prediction=polymorphism	ref_cov=0/82	total_cov=0/130
RA	1944	.	NC_007793	1658055	0	C	T	bias_e_value=269183	bias_p_value=0.092266	consensus_score=150.7	fisher_strand_p_value=1	frequency=3.094e-01	ks_quality_p_value=0.0184878	major_base=C	major_cov=0/96	major_frequency=6.906e-01	minor_base=T	minor_cov=0/43	new_cov=0/43	polymorphism_frequency=3.094e-01	polymorphism_score=72.3	prediction=polymorphism	ref_cov=0/96	total_cov=0/139
RA	1945	.	NC_007793	1661769	0	T	C	consensus_score=527.7	frequency=1	major_base=C	major_cov=4/181	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=4/181	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=4/181
RA	1946	.	NC_007793	1663728	0	T	C	consensus_score=147.3	frequency=1	major_base=C	major_cov=2/52	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/52	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/52
RA	1947	.	NC_007793	1664279	0	T	C	bias_e_value=373278	bias_p_value=0.127946	consensus_score=518.0	fisher_strand_p_value=0.0279526	frequency=2.283e-01	ks_quality_p_value=1	major_base=T	major_cov=16/251	major_frequency=7.717e-01	minor_base=C	minor_cov=0/79	new_cov=0/79	polymorphism_frequency=2.283e-01	polymorphism_score=64.1	prediction=polymorphism	ref_cov=16/251	total_cov=16/342
RA	1948	.	NC_007793	1664305	0	T	C	bias_e_value=822597	bias_p_value=0.281956	consensus_score=627.9	fisher_strand_p_value=0.0799594	frequency=2.000e-01	ks_quality_p_value=1	major_base=T	major_cov=13/299	major_frequency=8.000e-01	minor_base=C	minor_cov=0/78	new_cov=0/78	polymorphism_frequency=2.000e-01	polymorphism_score=69.3	prediction=polymorphism	ref_cov=13/299	total_cov=13/384
RA	1949	.	NC_007793	1664751	0	A	T	consensus_score=18.9	frequency=1	major_base=T	major_cov=0/9	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/9	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/9
RA	1950	.	NC_007793	1664756	0	G	.	consensus_score=29.9	frequency=1	major_base=.	major_cov=0/9	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/9	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/9
RA	1951	.	NC_007793	1665185	0	T	A	bias_e_value=2402030	bias_p_value=0.823326	consensus_score=68.3	fisher_strand_p_value=1	frequency=2.391e-01	ks_quality_p_value=0.467973	major_base=T	major_cov=2/33	major_frequency=7.609e-01	minor_base=A	minor_cov=0/11	new_cov=0/11	polymorphism_frequency=2.391e-01	polymorphism_score=21.0	prediction=polymorphism	ref_cov=2/33	total_cov=2/44
RA	1952	.	NC_007793	1666644	0	C	A	consensus_score=131.7	frequency=1	major_base=A	major_cov=0/46	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/46	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/46
RA	1953	.	NC_007793	1668748	0	A	G	bias_e_value=423761	bias_p_value=0.14525	consensus_score=20.2	fisher_strand_p_value=0.509246	frequency=3.947e-01	ks_quality_p_value=0.0646167	major_base=A	major_cov=2/21	major_frequency=6.053e-01	minor_base=G	minor_cov=0/15	new_cov=0/15	polymorphism_frequency=3.947e-01	polymorphism_score=25.1	prediction=polymorphism	ref_cov=2/21	total_cov=2/36
RA	1954	.	NC_007793	1672339	0	C	G	consensus_score=162.5	frequency=1	major_base=G	major_cov=0/62	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/62	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/62
RA	1955	.	NC_007793	1673030	0	C	T	bias_e_value=2047180	bias_p_value=0.701698	consensus_score=97.8	fisher_strand_p_value=0.335305	frequency=2.000e-01	ks_quality_p_value=1	major_base=C	major_cov=6/46	major_frequency=8.000e-01	minor_base=T	minor_cov=0/13	new_cov=0/13	polymorphism_frequency=2.000e-01	polymorphism_score=14.8	prediction=polymorphism	ref_cov=6/46	total_cov=6/60
RA	1956	.	NC_007793	1673038	0	T	G	bias_e_value=1446280	bias_p_value=0.495732	consensus_score=186.7	fisher_strand_p_value=0.18415	frequency=2.815e-01	ks_quality_p_value=1	major_base=T	major_cov=6/91	major_frequency=7.185e-01	minor_base=G	minor_cov=0/38	new_cov=0/38	polymorphism_frequency=2.815e-01	polymorphism_score=33.4	prediction=polymorphism	ref_cov=6/91	total_cov=6/134
RA	1957	.	NC_007793	1673045	0	T	A	bias_e_value=590957	bias_p_value=0.202558	consensus_score=117.8	fisher_strand_p_value=0.0511224	frequency=3.534e-01	ks_quality_p_value=0.996198	major_base=T	major_cov=7/79	major_frequency=6.466e-01	minor_base=A	minor_cov=0/47	new_cov=0/47	polymorphism_frequency=3.534e-01	polymorphism_score=64.7	prediction=polymorphism	ref_cov=7/79	total_cov=7/136
RA	1958	.	NC_007793	1673046	0	C	A	bias_e_value=7.80005e-05	bias_p_value=2.67357e-11	consensus_score=26.6	fisher_strand_p_value=0.000815681	frequency=6.241e-01	ks_quality_p_value=1.14198e-09	major_base=A	major_cov=0/88	major_frequency=6.241e-01	minor_base=C	minor_cov=7/46	new_cov=0/88	polymorphism_frequency=6.241e-01	polymorphism_score=126.5	prediction=polymorphism	ref_cov=7/46	total_cov=7/136
RA	1959	.	NC_007793	1673049	0	A	T	bias_e_value=1496070	bias_p_value=0.512797	consensus_score=207.3	fisher_strand_p_value=0.194401	frequency=2.448e-01	ks_quality_p_value=1	major_base=A	major_cov=7/101	major_frequency=7.552e-01	minor_base=T	minor_cov=0/35	new_cov=0/35	polymorphism_frequency=2.448e-01	polymorphism_score=34.1	prediction=polymorphism	ref_cov=7/101	total_cov=7/139
RA	1960	.	NC_007793	1673053	0	T	A	bias_e_value=1483390	bias_p_value=0.508449	consensus_score=164.6	fisher_strand_p_value=0.191757	frequency=2.868e-01	ks_quality_p_value=1	major_base=T	major_cov=7/90	major_frequency=7.132e-01	minor_base=A	minor_cov=0/39	new_cov=0/39	polymorphism_frequency=2.868e-01	polymorphism_score=47.3	prediction=polymorphism	ref_cov=7/90	total_cov=7/139
RA	1961	.	NC_007793	1673054	0	C	A	bias_e_value=0.000233084	bias_p_value=7.98926e-11	consensus_score=4.7	fisher_strand_p_value=0.00189957	frequency=5.786e-01	ks_quality_p_value=1.52568e-09	major_base=A	major_cov=0/81	major_frequency=5.786e-01	minor_base=C	minor_cov=7/52	new_cov=0/81	polymorphism_frequency=5.786e-01	polymorphism_score=141.7	prediction=polymorphism	ref_cov=7/52	total_cov=7/139
RA	1962	.	NC_007793	1673057	0	A	T	bias_e_value=567314	bias_p_value=0.194454	consensus_score=143.3	fisher_strand_p_value=0.0482306	frequency=3.636e-01	ks_quality_p_value=1	major_base=A	major_cov=7/84	major_frequency=6.364e-01	minor_base=T	minor_cov=0/52	new_cov=0/52	polymorphism_frequency=3.636e-01	polymorphism_score=50.6	prediction=polymorphism	ref_cov=7/84	total_cov=7/139
RA	1963	.	NC_007793	1673062	0	G	C	bias_e_value=238887	bias_p_value=0.0818815	consensus_score=61.7	fisher_strand_p_value=0.015932	frequency=4.552e-01	ks_quality_p_value=1	major_base=G	major_cov=7/72	major_frequency=5.448e-01	minor_base=C	minor_cov=0/66	new_cov=0/66	polymorphism_frequency=4.552e-01	polymorphism_score=129.1	prediction=polymorphism	ref_cov=7/72	total_cov=7/146
RA	1964	.	NC_007793	1673069	0	C	A	bias_e_value=930562	bias_p_value=0.318962	consensus_score=209.6	fisher_strand_p_value=0.19154	frequency=2.819e-01	ks_quality_p_value=0.496743	major_base=C	major_cov=7/100	major_frequency=7.181e-01	minor_base=A	minor_cov=0/42	new_cov=0/42	polymorphism_frequency=2.819e-01	polymorphism_score=48.8	prediction=polymorphism	ref_cov=7/100	total_cov=7/149
RA	1965	.	NC_007793	1673071	0	A	T	bias_e_value=1483810	bias_p_value=0.508596	consensus_score=185.9	fisher_strand_p_value=0.191846	frequency=2.847e-01	ks_quality_p_value=1	major_base=A	major_cov=7/96	major_frequency=7.153e-01	minor_base=T	minor_cov=0/41	new_cov=0/41	polymorphism_frequency=2.847e-01	polymorphism_score=44.4	prediction=polymorphism	ref_cov=7/96	total_cov=7/149
RA	1966	.	NC_007793	1673073	0	T	G	bias_e_value=568990	bias_p_value=0.195029	consensus_score=152.6	fisher_strand_p_value=0.0484202	frequency=3.648e-01	ks_quality_p_value=1	major_base=T	major_cov=7/94	major_frequency=6.352e-01	minor_base=G	minor_cov=0/58	new_cov=0/58	polymorphism_frequency=3.648e-01	polymorphism_score=57.4	prediction=polymorphism	ref_cov=7/94	total_cov=7/152
RA	1967	.	NC_007793	1673078	0	C	A	bias_e_value=34815.6	bias_p_value=0.0119335	consensus_score=120.4	fisher_strand_p_value=0.104631	frequency=2.927e-01	ks_quality_p_value=0.015341	major_base=C	major_cov=7/80	major_frequency=7.073e-01	minor_base=A	minor_cov=0/36	new_cov=0/36	polymorphism_frequency=2.927e-01	polymorphism_score=54.3	prediction=polymorphism	ref_cov=7/80	total_cov=7/151
RA	1968	.	NC_007793	1673079	0	A	G	bias_e_value=935581	bias_p_value=0.320682	consensus_score=129.7	fisher_strand_p_value=0.0958786	frequency=3.355e-01	ks_quality_p_value=1	major_base=A	major_cov=7/94	major_frequency=6.645e-01	minor_base=G	minor_cov=0/51	new_cov=0/51	polymorphism_frequency=3.355e-01	polymorphism_score=55.5	prediction=polymorphism	ref_cov=7/94	total_cov=7/151
RA	1969	.	NC_007793	1673081	0	G	T	bias_e_value=1974460	bias_p_value=0.676772	consensus_score=232.6	fisher_strand_p_value=0.346299	frequency=2.089e-01	ks_quality_p_value=0.904356	major_base=G	major_cov=7/118	major_frequency=7.911e-01	minor_base=T	minor_cov=0/33	new_cov=0/33	polymorphism_frequency=2.089e-01	polymorphism_score=30.8	prediction=polymorphism	ref_cov=7/118	total_cov=7/153
RA	1970	.	NC_007793	1673084	0	C	A	bias_e_value=3.30352	bias_p_value=1.13232e-06	consensus_score=121.4	fisher_strand_p_value=7.73792e-05	frequency=7.254e-01	ks_quality_p_value=0.000833496	major_base=A	major_cov=0/103	major_frequency=7.254e-01	minor_base=C	minor_cov=7/32	new_cov=0/103	polymorphism_frequency=7.254e-01	polymorphism_score=80.3	prediction=polymorphism	ref_cov=7/32	total_cov=7/147
RA	1971	.	NC_007793	1673089	0	T	A	bias_e_value=506330	bias_p_value=0.173551	consensus_score=74.2	fisher_strand_p_value=0.0415155	frequency=4.056e-01	ks_quality_p_value=0.999592	major_base=T	major_cov=7/78	major_frequency=5.944e-01	minor_base=A	minor_cov=0/58	new_cov=0/58	polymorphism_frequency=4.056e-01	polymorphism_score=67.4	prediction=polymorphism	ref_cov=7/78	total_cov=7/141
RA	1972	.	NC_007793	1685900	0	A	G	bias_e_value=2781530	bias_p_value=0.953406	consensus_score=492.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.710697	major_base=G	major_cov=4/177	major_frequency=9.945e-01	minor_base=T	minor_cov=0/1	new_cov=4/177	polymorphism_frequency=9.945e-01	polymorphism_score=-4.9	prediction=consensus	ref_cov=0/0	total_cov=4/178
RA	1973	.	NC_007793	1688972	0	T	A	bias_e_value=1533850	bias_p_value=0.525748	consensus_score=206.8	fisher_strand_p_value=0.202407	frequency=2.157e-01	ks_quality_p_value=1	major_base=T	major_cov=8/112	major_frequency=7.843e-01	minor_base=A	minor_cov=0/33	new_cov=0/33	polymorphism_frequency=2.157e-01	polymorphism_score=30.8	prediction=polymorphism	ref_cov=8/112	total_cov=8/145
RA	1974	.	NC_007793	1688984	0	C	A	bias_e_value=1022610	bias_p_value=0.350511	consensus_score=119.2	fisher_strand_p_value=0.108965	frequency=3.035e-01	ks_quality_p_value=1	major_base=C	major_cov=8/132	major_frequency=6.965e-01	minor_base=A	minor_cov=0/61	new_cov=0/61	polymorphism_frequency=3.035e-01	polymorphism_score=86.5	prediction=polymorphism	ref_cov=8/132	total_cov=8/193
RA	1975	.	NC_007793	1693041	1	.	T	bias_e_value=2874770	bias_p_value=0.985365	consensus_score=102.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.833867	major_base=T	major_cov=1/35	major_frequency=9.730e-01	minor_base=.	minor_cov=0/1	new_cov=1/35	polymorphism_frequency=9.730e-01	polymorphism_score=-3.5	prediction=consensus	ref_cov=0/1	total_cov=1/36
RA	1976	.	NC_007793	1693739	0	T	C	consensus_score=20.8	frequency=1	major_base=C	major_cov=1/9	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/9	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/9
RA	1977	.	NC_007793	1694832	0	C	A	bias_e_value=2909200	bias_p_value=0.997166	consensus_score=143.0	fisher_strand_p_value=1	frequency=2.532e-01	ks_quality_p_value=0.925671	major_base=C	major_cov=1/58	major_frequency=7.468e-01	minor_base=A	minor_cov=0/20	new_cov=0/20	polymorphism_frequency=2.532e-01	polymorphism_score=21.1	prediction=polymorphism	ref_cov=1/58	total_cov=1/78
RA	1978	.	NC_007793	1694844	0	G	T	bias_e_value=2917470	bias_p_value=1	consensus_score=145.5	fisher_strand_p_value=1	frequency=2.308e-01	ks_quality_p_value=1	major_base=G	major_cov=0/60	major_frequency=7.692e-01	minor_base=T	minor_cov=0/18	new_cov=0/18	polymorphism_frequency=2.308e-01	polymorphism_score=10.1	prediction=polymorphism	ref_cov=0/60	total_cov=0/78
RA	1979	.	NC_007793	1694852	0	C	T	bias_e_value=2917470	bias_p_value=1	consensus_score=84.7	fisher_strand_p_value=1	frequency=3.548e-01	ks_quality_p_value=1	major_base=C	major_cov=0/60	major_frequency=6.452e-01	minor_base=T	minor_cov=0/33	new_cov=0/33	polymorphism_frequency=3.548e-01	polymorphism_score=36.2	prediction=polymorphism	ref_cov=0/60	total_cov=0/97
RA	1980	.	NC_007793	1699824	0	A	C	consensus_score=13.0	frequency=1	major_base=C	major_cov=5/2	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=5/2	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=5/2
RA	1981	.	NC_007793	1700259	0	G	A	consensus_score=124.9	frequency=1	major_base=A	major_cov=6/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=6/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=6/38
RA	1982	.	NC_007793	1706203	0	C	T	consensus_score=399.2	frequency=1	major_base=T	major_cov=10/135	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=10/135	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=10/135
RA	1983	.	NC_007793	1718449	0	A	C	bias_e_value=1463340	bias_p_value=0.501578	consensus_score=213.7	fisher_strand_p_value=0.187624	frequency=2.645e-01	ks_quality_p_value=1	major_base=A	major_cov=7/82	major_frequency=7.355e-01	minor_base=C	minor_cov=0/32	new_cov=0/32	polymorphism_frequency=2.645e-01	polymorphism_score=25.9	prediction=polymorphism	ref_cov=7/82	total_cov=7/119
RA	1984	.	NC_007793	1718480	0	T	C	bias_e_value=293200	bias_p_value=0.100498	consensus_score=101.1	fisher_strand_p_value=0.0205792	frequency=4.211e-01	ks_quality_p_value=1	major_base=T	major_cov=8/69	major_frequency=5.789e-01	minor_base=C	minor_cov=0/56	new_cov=0/56	polymorphism_frequency=4.211e-01	polymorphism_score=66.1	prediction=polymorphism	ref_cov=8/69	total_cov=8/129
RA	1985	.	NC_007793	1718492	0	C	T	bias_e_value=2546040	bias_p_value=0.872688	consensus_score=104.5	fisher_strand_p_value=0.563812	frequency=2.632e-01	ks_quality_p_value=0.957616	major_base=C	major_cov=3/67	major_frequency=7.368e-01	minor_base=T	minor_cov=0/25	new_cov=0/25	polymorphism_frequency=2.632e-01	polymorphism_score=23.5	prediction=polymorphism	ref_cov=3/67	total_cov=3/99
RA	1986	.	NC_007793	1718501	0	C	A	bias_e_value=1767990	bias_p_value=0.606002	consensus_score=109.1	fisher_strand_p_value=1	frequency=2.424e-01	ks_quality_p_value=0.256868	major_base=C	major_cov=2/73	major_frequency=7.576e-01	minor_base=A	minor_cov=0/24	new_cov=0/24	polymorphism_frequency=2.424e-01	polymorphism_score=19.6	prediction=polymorphism	ref_cov=2/73	total_cov=2/99
RA	1987	.	NC_007793	1719311	0	G	A	bias_e_value=44680.6	bias_p_value=0.0153149	consensus_score=-1.9	fisher_strand_p_value=0.47619	frequency=5.238e-01	ks_quality_p_value=0.00450097	major_base=A	major_cov=0/11	major_frequency=5.238e-01	minor_base=G	minor_cov=1/9	new_cov=0/11	polymorphism_frequency=5.238e-01	polymorphism_score=15.0	prediction=polymorphism	ref_cov=1/9	total_cov=1/20
RA	1988	.	NC_007793	1719326	0	T	A	bias_e_value=28389.9	bias_p_value=0.009731	consensus_score=1.0	fisher_strand_p_value=0.375	frequency=6.250e-01	ks_quality_p_value=0.00338335	major_base=A	major_cov=0/15	major_frequency=6.250e-01	minor_base=T	minor_cov=1/8	new_cov=0/15	polymorphism_frequency=6.250e-01	polymorphism_score=14.5	prediction=polymorphism	ref_cov=1/8	total_cov=1/23
RA	1989	.	NC_007793	1719331	0	G	A	bias_e_value=2909270	bias_p_value=0.997189	consensus_score=-4.9	fisher_strand_p_value=1	frequency=5.000e-01	ks_quality_p_value=0.925961	major_base=G	major_cov=1/12	major_frequency=5.000e-01	minor_base=A	minor_cov=0/13	new_cov=0/13	polymorphism_frequency=5.000e-01	polymorphism_score=14.9	prediction=polymorphism	ref_cov=1/12	total_cov=1/26
RA	1990	.	NC_007793	1720987	1	.	G	bias_e_value=19876.5	bias_p_value=0.00681292	consensus_score=169.8	fisher_strand_p_value=0.000843382	frequency=5.714e-01	ks_quality_p_value=1	major_base=G	major_cov=0/76	major_frequency=5.714e-01	minor_base=.	minor_cov=8/49	new_cov=0/76	polymorphism_frequency=5.714e-01	polymorphism_score=217.5	prediction=polymorphism	ref_cov=8/49	total_cov=8/125
RA	1991	.	NC_007793	1720990	0	T	C	bias_e_value=107694	bias_p_value=0.0369136	consensus_score=73.5	fisher_strand_p_value=0.00750194	frequency=5.956e-01	ks_quality_p_value=0.805467	major_base=C	major_cov=1/80	major_frequency=5.956e-01	minor_base=T	minor_cov=7/48	new_cov=1/80	polymorphism_frequency=5.956e-01	polymorphism_score=110.8	prediction=polymorphism	ref_cov=7/48	total_cov=8/128
RA	1992	.	NC_007793	1725858	0	G	A	consensus_score=191.2	frequency=1	major_base=A	major_cov=5/61	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=5/61	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=5/61
RA	1993	.	NC_007793	1734797	0	G	C	bias_e_value=9337.84	bias_p_value=0.00320066	consensus_score=19.5	fisher_strand_p_value=0.00103199	frequency=3.158e-01	ks_quality_p_value=0.347139	major_base=G	major_cov=11/2	major_frequency=6.842e-01	minor_base=C	minor_cov=0/6	new_cov=0/6	polymorphism_frequency=3.158e-01	polymorphism_score=10.2	prediction=polymorphism	ref_cov=11/2	total_cov=11/8
RA	1994	.	NC_007793	1734801	0	A	T	bias_e_value=230.984	bias_p_value=7.91729e-05	consensus_score=1.5	fisher_strand_p_value=0.000221141	frequency=4.091e-01	ks_quality_p_value=0.0275197	major_base=A	major_cov=11/2	major_frequency=5.909e-01	minor_base=T	minor_cov=0/9	new_cov=0/9	polymorphism_frequency=4.091e-01	polymorphism_score=17.6	prediction=polymorphism	ref_cov=11/2	total_cov=11/11
RA	1995	.	NC_007793	1745180	0	T	C	consensus_score=242.2	frequency=1	major_base=C	major_cov=1/85	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/85	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/85
RA	1996	.	NC_007793	1755411	0	C	T	bias_e_value=1582480	bias_p_value=0.542416	consensus_score=20.2	fisher_strand_p_value=0.499175	frequency=4.603e-01	ks_quality_p_value=0.426729	major_base=C	major_cov=2/66	major_frequency=5.397e-01	minor_base=T	minor_cov=0/58	new_cov=0/58	polymorphism_frequency=4.603e-01	polymorphism_score=116.7	prediction=polymorphism	ref_cov=2/66	total_cov=2/124
RA	1997	.	NC_007793	1764752	0	A	G	bias_e_value=1.5892e-11	bias_p_value=5.4472e-18	consensus_score=78.8	fisher_strand_p_value=8.87858e-10	frequency=4.828e-01	ks_quality_p_value=1.37721e-10	major_base=A	major_cov=30/166	major_frequency=5.172e-01	minor_base=G	minor_cov=0/183	new_cov=0/183	polymorphism_frequency=4.828e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=30/166	total_cov=30/352
RA	1998	.	NC_007793	1764756	0	C	T	bias_e_value=9.91605e-06	bias_p_value=3.39885e-12	consensus_score=83.7	fisher_strand_p_value=3.82161e-09	frequency=4.642e-01	ks_quality_p_value=2.88419e-05	major_base=C	major_cov=30/187	major_frequency=5.358e-01	minor_base=T	minor_cov=0/188	new_cov=0/188	polymorphism_frequency=4.642e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=30/187	total_cov=30/375
RA	1999	.	NC_007793	1765020	0	A	C	bias_e_value=2510190	bias_p_value=0.8604	consensus_score=363.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.520548	major_base=C	major_cov=0/142	major_frequency=9.793e-01	minor_base=T	minor_cov=0/3	new_cov=0/142	polymorphism_frequency=9.793e-01	polymorphism_score=-2.8	prediction=consensus	ref_cov=0/0	total_cov=0/145
RA	2000	.	NC_007793	1771057	0	A	T	consensus_score=245.5	frequency=1	major_base=T	major_cov=3/87	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=3/87	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=3/87
RA	2001	.	NC_007793	1776121	0	T	C	bias_e_value=2917450	bias_p_value=0.999992	consensus_score=1811.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.996008	major_base=C	major_cov=21/627	major_frequency=9.985e-01	minor_base=A	minor_cov=0/1	new_cov=21/627	polymorphism_frequency=9.985e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=21/628
RA	2002	.	NC_007793	1783288	0	G	A	bias_e_value=2916760	bias_p_value=0.999756	consensus_score=643.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.978007	major_base=A	major_cov=42/185	major_frequency=9.913e-01	minor_base=G	minor_cov=0/2	new_cov=42/185	polymorphism_frequency=9.913e-01	polymorphism_score=-5.8	prediction=consensus	ref_cov=0/2	total_cov=42/187
RA	2003	.	NC_007793	1789862	0	G	T	bias_e_value=2917470	bias_p_value=1	consensus_score=195.2	fisher_strand_p_value=1	frequency=2.315e-01	ks_quality_p_value=1	major_base=G	major_cov=3/80	major_frequency=7.685e-01	minor_base=T	minor_cov=0/25	new_cov=0/25	polymorphism_frequency=2.315e-01	polymorphism_score=20.8	prediction=polymorphism	ref_cov=3/80	total_cov=3/105
RA	2004	.	NC_007793	1789867	0	T	C	bias_e_value=2571400	bias_p_value=0.881381	consensus_score=129.9	fisher_strand_p_value=0.554329	frequency=2.900e-01	ks_quality_p_value=1	major_base=T	major_cov=3/68	major_frequency=7.100e-01	minor_base=C	minor_cov=0/29	new_cov=0/29	polymorphism_frequency=2.900e-01	polymorphism_score=26.8	prediction=polymorphism	ref_cov=3/68	total_cov=3/99
RA	2005	.	NC_007793	1789881	0	G	A	bias_e_value=2572500	bias_p_value=0.881756	consensus_score=92.7	fisher_strand_p_value=0.554965	frequency=2.800e-01	ks_quality_p_value=1	major_base=G	major_cov=3/51	major_frequency=7.200e-01	minor_base=A	minor_cov=0/21	new_cov=0/21	polymorphism_frequency=2.800e-01	polymorphism_score=14.7	prediction=polymorphism	ref_cov=3/51	total_cov=3/76
RA	2006	.	NC_007793	1789889	0	G	A	bias_e_value=1750050	bias_p_value=0.599853	consensus_score=41.8	fisher_strand_p_value=0.252373	frequency=4.375e-01	ks_quality_p_value=1	major_base=G	major_cov=3/42	major_frequency=5.625e-01	minor_base=A	minor_cov=0/35	new_cov=0/35	polymorphism_frequency=4.375e-01	polymorphism_score=39.5	prediction=polymorphism	ref_cov=3/42	total_cov=3/77
RA	2007	.	NC_007793	1789894	0	A	T	bias_e_value=2565920	bias_p_value=0.879502	consensus_score=90.9	fisher_strand_p_value=0.551158	frequency=2.879e-01	ks_quality_p_value=1	major_base=A	major_cov=3/44	major_frequency=7.121e-01	minor_base=T	minor_cov=0/19	new_cov=0/19	polymorphism_frequency=2.879e-01	polymorphism_score=13.2	prediction=polymorphism	ref_cov=3/44	total_cov=3/76
RA	2008	.	NC_007793	1789895	0	C	T	bias_e_value=2558330	bias_p_value=0.876901	consensus_score=67.9	fisher_strand_p_value=0.546822	frequency=3.377e-01	ks_quality_p_value=1	major_base=C	major_cov=3/48	major_frequency=6.623e-01	minor_base=T	minor_cov=0/26	new_cov=0/26	polymorphism_frequency=3.377e-01	polymorphism_score=27.4	prediction=polymorphism	ref_cov=3/48	total_cov=3/76
RA	2009	.	NC_007793	1794870	0	A	C	bias_e_value=1558250	bias_p_value=0.534109	consensus_score=-6.3	fisher_strand_p_value=0.211424	frequency=5.362e-01	ks_quality_p_value=0.982312	major_base=C	major_cov=0/37	major_frequency=5.362e-01	minor_base=A	minor_cov=2/30	new_cov=0/37	polymorphism_frequency=5.362e-01	polymorphism_score=93.9	prediction=polymorphism	ref_cov=2/30	total_cov=2/67
RA	2010	.	NC_007793	1801894	0	T	A	bias_e_value=2291650	bias_p_value=0.785494	consensus_score=36.6	fisher_strand_p_value=1	frequency=3.696e-01	ks_quality_p_value=0.42132	major_base=T	major_cov=28/1	major_frequency=6.304e-01	minor_base=A	minor_cov=17/0	new_cov=17/0	polymorphism_frequency=3.696e-01	polymorphism_score=34.4	prediction=polymorphism	ref_cov=28/1	total_cov=45/1
RA	2011	.	NC_007793	1805249	0	A	C	bias_e_value=195194	bias_p_value=0.0669054	consensus_score=897.8	fisher_strand_p_value=0.47531	frequency=2.160e-01	ks_quality_p_value=0.0261212	major_base=A	major_cov=11/312	major_frequency=7.840e-01	minor_base=C	minor_cov=1/88	new_cov=1/88	polymorphism_frequency=2.160e-01	polymorphism_score=178.6	prediction=polymorphism	ref_cov=11/312	total_cov=12/403
RA	2012	.	NC_007793	1822395	0	A	T	bias_e_value=264664	bias_p_value=0.0907169	consensus_score=40.8	fisher_strand_p_value=0.083076	frequency=3.333e-01	ks_quality_p_value=0.21788	major_base=A	major_cov=6/22	major_frequency=6.667e-01	minor_base=T	minor_cov=0/14	new_cov=0/14	polymorphism_frequency=3.333e-01	polymorphism_score=30.3	prediction=polymorphism	ref_cov=6/22	total_cov=9/42
RA	2013	.	NC_007793	1823432	0	T	.	bias_e_value=13198.8	bias_p_value=0.00452404	consensus_score=1806.8	fisher_strand_p_value=0.00252412	frequency=2.268e-01	ks_quality_p_value=0.209787	major_base=T	major_cov=25/582	major_frequency=7.732e-01	minor_base=.	minor_cov=0/178	new_cov=0/178	polymorphism_frequency=2.268e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=25/582	total_cov=25/762
RA	2014	.	NC_007793	1838956	0	A	G	consensus_score=183.0	frequency=1	major_base=G	major_cov=0/70	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/70	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/70
RA	2015	.	NC_007793	1846346	0	A	T	bias_e_value=2917470	bias_p_value=1	consensus_score=247.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=6/85	major_frequency=9.891e-01	minor_base=A	minor_cov=0/1	new_cov=6/85	polymorphism_frequency=9.891e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=6/86
RA	2016	.	NC_007793	1857182	0	G	A	bias_e_value=2457820	bias_p_value=0.84245	consensus_score=353.6	fisher_strand_p_value=0.688837	frequency=3.300e-01	ks_quality_p_value=0.717297	major_base=G	major_cov=4/262	major_frequency=6.700e-01	minor_base=A	minor_cov=3/128	new_cov=3/128	polymorphism_frequency=3.300e-01	polymorphism_score=278.1	prediction=polymorphism	ref_cov=4/262	total_cov=7/390
RA	2017	.	NC_007793	1857188	0	C	T	bias_e_value=2669930	bias_p_value=0.915153	consensus_score=357.2	fisher_strand_p_value=1	frequency=3.477e-01	ks_quality_p_value=0.61744	major_base=C	major_cov=3/239	major_frequency=6.523e-01	minor_base=T	minor_cov=2/127	new_cov=2/127	polymorphism_frequency=3.477e-01	polymorphism_score=257.5	prediction=polymorphism	ref_cov=3/239	total_cov=5/366
RA	2018	.	NC_007793	1857201	0	T	C	bias_e_value=2621890	bias_p_value=0.898687	consensus_score=405.3	fisher_strand_p_value=0.586504	frequency=3.003e-01	ks_quality_p_value=0.997572	major_base=T	major_cov=2/245	major_frequency=6.997e-01	minor_base=C	minor_cov=2/104	new_cov=2/104	polymorphism_frequency=3.003e-01	polymorphism_score=201.3	prediction=polymorphism	ref_cov=2/245	total_cov=4/350
RA	2019	.	NC_007793	1857202	0	G	A	bias_e_value=2196280	bias_p_value=0.752804	consensus_score=376.8	fisher_strand_p_value=0.587908	frequency=3.037e-01	ks_quality_p_value=0.655429	major_base=G	major_cov=2/241	major_frequency=6.963e-01	minor_base=A	minor_cov=2/104	new_cov=2/104	polymorphism_frequency=3.037e-01	polymorphism_score=197.6	prediction=polymorphism	ref_cov=2/241	total_cov=4/346
RA	2020	.	NC_007793	1857213	0	T	C	bias_e_value=1949700	bias_p_value=0.668285	consensus_score=477.7	fisher_strand_p_value=0.30594	frequency=2.761e-01	ks_quality_p_value=1	major_base=T	major_cov=2/255	major_frequency=7.239e-01	minor_base=C	minor_cov=2/96	new_cov=2/96	polymorphism_frequency=2.761e-01	polymorphism_score=164.1	prediction=polymorphism	ref_cov=2/255	total_cov=4/351
RA	2021	.	NC_007793	1857215	0	T	C	bias_e_value=2674590	bias_p_value=0.91675	consensus_score=458.1	fisher_strand_p_value=0.620771	frequency=2.784e-01	ks_quality_p_value=1	major_base=T	major_cov=3/251	major_frequency=7.216e-01	minor_base=C	minor_cov=2/96	new_cov=2/96	polymorphism_frequency=2.784e-01	polymorphism_score=179.6	prediction=polymorphism	ref_cov=3/251	total_cov=5/349
RA	2022	.	NC_007793	1857232	0	T	C	bias_e_value=2563590	bias_p_value=0.878702	consensus_score=446.7	fisher_strand_p_value=0.554452	frequency=3.446e-01	ks_quality_p_value=0.991643	major_base=T	major_cov=3/288	major_frequency=6.554e-01	minor_base=C	minor_cov=0/153	new_cov=0/153	polymorphism_frequency=3.446e-01	polymorphism_score=308.0	prediction=polymorphism	ref_cov=3/288	total_cov=3/441
RA	2023	.	NC_007793	1857258	0	C	T	bias_e_value=57352.1	bias_p_value=0.0196582	consensus_score=190.9	fisher_strand_p_value=0.416183	frequency=4.515e-01	ks_quality_p_value=0.00689139	major_base=C	major_cov=2/230	major_frequency=5.485e-01	minor_base=T	minor_cov=4/187	new_cov=4/187	polymorphism_frequency=4.515e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=2/230	total_cov=6/417
RA	2024	.	NC_007793	1857276	0	C	T	bias_e_value=1922480	bias_p_value=0.658955	consensus_score=2.3	fisher_strand_p_value=0.300661	frequency=5.468e-01	ks_quality_p_value=0.991639	major_base=T	major_cov=6/181	major_frequency=5.468e-01	minor_base=C	minor_cov=2/153	new_cov=6/181	polymorphism_frequency=5.468e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=2/153	total_cov=8/335
RA	2025	.	NC_007793	1857712	0	A	G	bias_e_value=2831680	bias_p_value=0.970594	consensus_score=363.2	fisher_strand_p_value=0.802328	frequency=2.153e-01	ks_quality_p_value=0.956592	major_base=A	major_cov=20/144	major_frequency=7.847e-01	minor_base=G	minor_cov=6/39	new_cov=6/39	polymorphism_frequency=2.153e-01	polymorphism_score=68.1	prediction=polymorphism	ref_cov=20/144	total_cov=29/200
RA	2026	.	NC_007793	1862563	0	T	C	consensus_score=230.7	frequency=1	major_base=C	major_cov=6/78	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=6/78	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=6/78
RA	2027	.	NC_007793	1863084	0	T	G	bias_e_value=1027340	bias_p_value=0.352134	consensus_score=845.3	fisher_strand_p_value=0.11041	frequency=1	ks_quality_p_value=0.993552	major_base=G	major_cov=34/282	major_frequency=9.968e-01	minor_base=A	minor_cov=1/0	new_cov=34/282	polymorphism_frequency=9.968e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=35/282
RA	2028	.	NC_007793	1868492	0	C	T	bias_e_value=2917470	bias_p_value=1	consensus_score=1214.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=41/391	major_frequency=9.977e-01	minor_base=A	minor_cov=0/1	new_cov=41/391	polymorphism_frequency=9.977e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=41/392
RA	2029	.	NC_007793	1868605	0	G	A	bias_e_value=5.10709e-77	bias_p_value=1.75052e-83	consensus_score=188.0	fisher_strand_p_value=1.21188e-85	frequency=3.805e-01	ks_quality_p_value=0.733841	major_base=G	major_cov=3/194	major_frequency=6.195e-01	minor_base=A	minor_cov=121/0	new_cov=121/0	polymorphism_frequency=3.805e-01	polymorphism_score=246.5	prediction=polymorphism	ref_cov=3/194	total_cov=124/194
RA	2030	.	NC_007793	1868610	0	T	G	bias_e_value=2.72171e-77	bias_p_value=9.32902e-84	consensus_score=289.2	fisher_strand_p_value=4.72428e-86	frequency=3.738e-01	ks_quality_p_value=1	major_base=T	major_cov=3/198	major_frequency=6.262e-01	minor_base=G	minor_cov=120/0	new_cov=120/0	polymorphism_frequency=3.738e-01	polymorphism_score=294.7	prediction=polymorphism	ref_cov=3/198	total_cov=123/198
RA	2031	.	NC_007793	1871459	0	G	C	consensus_score=467.3	frequency=1	major_base=C	major_cov=1/167	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/167	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/167
RA	2032	.	NC_007793	1877205	0	A	G	consensus_score=52.0	frequency=1	major_base=G	major_cov=13/9	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=13/9	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=13/9
RA	2033	.	NC_007793	1884824	0	G	T	bias_e_value=2917470	bias_p_value=1	consensus_score=80.0	fisher_strand_p_value=1	frequency=3.333e-01	ks_quality_p_value=1	major_base=G	major_cov=1/45	major_frequency=6.667e-01	minor_base=T	minor_cov=0/23	new_cov=0/23	polymorphism_frequency=3.333e-01	polymorphism_score=51.3	prediction=polymorphism	ref_cov=1/45	total_cov=1/71
RA	2034	.	NC_007793	1887533	0	A	G	consensus_score=237.1	frequency=1	major_base=G	major_cov=1/88	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/88	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/88
RA	2035	.	NC_007793	1887843	0	T	.	consensus_score=80.6	frequency=1	major_base=.	major_cov=1/21	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/21	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/21
RA	2036	.	NC_007793	1897441	0	A	G	bias_e_value=2877830	bias_p_value=0.986412	consensus_score=351.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.839743	major_base=G	major_cov=7/126	major_frequency=9.852e-01	minor_base=A	minor_cov=0/2	new_cov=7/126	polymorphism_frequency=9.852e-01	polymorphism_score=-4.1	prediction=consensus	ref_cov=0/2	total_cov=7/128
RA	2037	.	NC_007793	1908169	0	T	C	bias_e_value=2917470	bias_p_value=0.999999	consensus_score=1653.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.99845	major_base=C	major_cov=1/573	major_frequency=9.983e-01	minor_base=T	minor_cov=0/1	new_cov=1/573	polymorphism_frequency=9.983e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=1/574
RA	2038	.	NC_007793	1909357	0	A	G	consensus_score=29.1	frequency=1	major_base=G	major_cov=12/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=12/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=12/1
RA	2039	.	NC_007793	1913193	0	C	A	bias_e_value=2917470	bias_p_value=1	consensus_score=88.3	fisher_strand_p_value=1	frequency=2.807e-01	ks_quality_p_value=1	major_base=C	major_cov=1/40	major_frequency=7.193e-01	minor_base=A	minor_cov=0/16	new_cov=0/16	polymorphism_frequency=2.807e-01	polymorphism_score=14.4	prediction=polymorphism	ref_cov=1/40	total_cov=1/58
RA	2040	.	NC_007793	1913201	0	C	A	bias_e_value=2917470	bias_p_value=1	consensus_score=67.2	fisher_strand_p_value=1	frequency=3.455e-01	ks_quality_p_value=1	major_base=C	major_cov=1/35	major_frequency=6.545e-01	minor_base=A	minor_cov=0/19	new_cov=0/19	polymorphism_frequency=3.455e-01	polymorphism_score=17.8	prediction=polymorphism	ref_cov=1/35	total_cov=1/54
RA	2041	.	NC_007793	1913207	0	C	T	bias_e_value=2917470	bias_p_value=1	consensus_score=68.6	fisher_strand_p_value=1	frequency=2.364e-01	ks_quality_p_value=1	major_base=C	major_cov=1/41	major_frequency=7.636e-01	minor_base=T	minor_cov=0/13	new_cov=0/13	polymorphism_frequency=2.364e-01	polymorphism_score=11.2	prediction=polymorphism	ref_cov=1/41	total_cov=1/54
RA	2042	.	NC_007793	1913210	0	G	T	bias_e_value=2917470	bias_p_value=1	consensus_score=73.0	fisher_strand_p_value=1	frequency=2.593e-01	ks_quality_p_value=1	major_base=G	major_cov=1/39	major_frequency=7.407e-01	minor_base=T	minor_cov=0/14	new_cov=0/14	polymorphism_frequency=2.593e-01	polymorphism_score=10.4	prediction=polymorphism	ref_cov=1/39	total_cov=1/55
RA	2043	.	NC_007793	1913223	0	T	A	bias_e_value=1381720	bias_p_value=0.473603	consensus_score=5.8	fisher_strand_p_value=1	frequency=4.681e-01	ks_quality_p_value=0.171341	major_base=T	major_cov=1/24	major_frequency=5.319e-01	minor_base=A	minor_cov=0/22	new_cov=0/22	polymorphism_frequency=4.681e-01	polymorphism_score=31.3	prediction=polymorphism	ref_cov=1/24	total_cov=1/48
RA	2044	.	NC_007793	1913228	0	C	T	bias_e_value=1850110	bias_p_value=0.634151	consensus_score=-5.9	fisher_strand_p_value=0.454545	frequency=5.455e-01	ks_quality_p_value=0.61207	major_base=T	major_cov=0/24	major_frequency=5.455e-01	minor_base=C	minor_cov=1/19	new_cov=0/24	polymorphism_frequency=5.455e-01	polymorphism_score=28.0	prediction=polymorphism	ref_cov=1/19	total_cov=1/45
RA	2045	.	NC_007793	1913231	0	T	A	bias_e_value=2917470	bias_p_value=1	consensus_score=-2.4	fisher_strand_p_value=1	frequency=5.000e-01	ks_quality_p_value=1	major_base=T	major_cov=1/21	major_frequency=5.000e-01	minor_base=A	minor_cov=0/22	new_cov=0/22	polymorphism_frequency=5.000e-01	polymorphism_score=31.2	prediction=polymorphism	ref_cov=1/21	total_cov=1/45
RA	2046	.	NC_007793	1913997	0	C	T	bias_e_value=2917470	bias_p_value=1	consensus_score=2037.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=4/713	major_frequency=9.986e-01	minor_base=C	minor_cov=0/1	new_cov=4/713	polymorphism_frequency=9.986e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=4/714
RA	2047	.	NC_007793	1914404	0	G	A	bias_e_value=2894490	bias_p_value=0.992124	consensus_score=177.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.877147	major_base=A	major_cov=2/60	major_frequency=9.841e-01	minor_base=G	minor_cov=0/1	new_cov=2/60	polymorphism_frequency=9.841e-01	polymorphism_score=-5.3	prediction=consensus	ref_cov=0/1	total_cov=2/61
RA	2048	.	NC_007793	1923093	0	G	T	bias_e_value=2914150	bias_p_value=0.998862	consensus_score=-3.0	fisher_strand_p_value=1	frequency=4.545e-01	ks_quality_p_value=0.952672	major_base=G	major_cov=12/0	major_frequency=5.455e-01	minor_base=T	minor_cov=10/0	new_cov=10/0	polymorphism_frequency=4.545e-01	polymorphism_score=12.8	prediction=polymorphism	ref_cov=12/0	total_cov=22/0
RA	2049	.	NC_007793	1924728	0	C	A	consensus_score=38.0	frequency=1	major_base=A	major_cov=15/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=15/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=15/1
RA	2050	.	NC_007793	1924930	0	T	C	consensus_score=41.6	frequency=1	major_base=C	major_cov=16/2	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=16/2	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=16/2
RA	2051	.	NC_007793	1929062	0	G	A	bias_e_value=2371140	bias_p_value=0.81274	consensus_score=18.9	fisher_strand_p_value=0.469697	frequency=1	ks_quality_p_value=0.967216	major_base=A	major_cov=5/5	major_frequency=8.333e-01	minor_base=T	minor_cov=2/0	new_cov=5/5	polymorphism_frequency=8.333e-01	polymorphism_score=-0.9	prediction=consensus	ref_cov=1/0	total_cov=8/5
RA	2052	.	NC_007793	1929083	0	G	T	bias_e_value=1771010	bias_p_value=0.607035	consensus_score=118.9	fisher_strand_p_value=0.717614	frequency=3.061e-01	ks_quality_p_value=0.359008	major_base=G	major_cov=61/7	major_frequency=6.939e-01	minor_base=T	minor_cov=28/2	new_cov=28/2	polymorphism_frequency=3.061e-01	polymorphism_score=72.1	prediction=polymorphism	ref_cov=61/7	total_cov=89/9
RA	2053	.	NC_007793	1929090	0	T	.	bias_e_value=1868910	bias_p_value=0.640592	consensus_score=20.4	fisher_strand_p_value=0.469522	frequency=6.000e-01	ks_quality_p_value=0.603347	major_base=.	major_cov=51/6	major_frequency=6.000e-01	minor_base=C	minor_cov=36/2	new_cov=51/6	polymorphism_frequency=6.000e-01	polymorphism_score=198.2	prediction=polymorphism	ref_cov=11/1	total_cov=98/9
RA	2054	.	NC_007793	1929091	0	T	.	bias_e_value=1666240	bias_p_value=0.571124	consensus_score=163.3	fisher_strand_p_value=0.49763	frequency=5.327e-01	ks_quality_p_value=0.466441	major_base=.	major_cov=51/6	major_frequency=5.327e-01	minor_base=T	minor_cov=47/3	new_cov=51/6	polymorphism_frequency=5.327e-01	polymorphism_score=220.9	prediction=polymorphism	ref_cov=47/3	total_cov=98/9
RA	2055	.	NC_007793	1929093	0	A	C	bias_e_value=8.23543e-12	bias_p_value=2.8228e-18	consensus_score=500.9	fisher_strand_p_value=0.00755859	frequency=2.127e-01	ks_quality_p_value=8.25858e-18	major_base=A	major_cov=207/4	major_frequency=7.873e-01	minor_base=C	minor_cov=51/6	new_cov=51/6	polymorphism_frequency=2.127e-01	polymorphism_score=133.2	prediction=polymorphism	ref_cov=207/4	total_cov=258/10
RA	2056	.	NC_007793	1929095	0	A	G	bias_e_value=4.21243e-10	bias_p_value=1.44387e-16	consensus_score=320.1	fisher_strand_p_value=0.000732856	frequency=7.216e-01	ks_quality_p_value=4.78291e-15	major_base=G	major_cov=195/2	major_frequency=7.216e-01	minor_base=A	minor_cov=68/8	new_cov=195/2	polymorphism_frequency=7.216e-01	polymorphism_score=150.5	prediction=polymorphism	ref_cov=68/8	total_cov=263/10
RA	2057	.	NC_007793	1929111	0	T	C	bias_e_value=1120.06	bias_p_value=0.000383914	consensus_score=846.8	fisher_strand_p_value=0.000698197	frequency=1	ks_quality_p_value=0.0487084	major_base=C	major_cov=334/9	major_frequency=9.397e-01	minor_base=T	minor_cov=17/5	new_cov=334/9	polymorphism_frequency=9.397e-01	polymorphism_score=25.5	prediction=consensus	ref_cov=17/5	total_cov=352/14
RA	2058	.	NC_007793	1929112	1	.	T	bias_e_value=21468.4	bias_p_value=0.00735858	consensus_score=1021.3	fisher_strand_p_value=0.00130329	frequency=1	ks_quality_p_value=0.706647	major_base=T	major_cov=332/9	major_frequency=9.317e-01	minor_base=.	minor_cov=20/5	new_cov=332/9	polymorphism_frequency=9.317e-01	polymorphism_score=55.9	prediction=consensus	ref_cov=20/5	total_cov=352/14
RA	2059	.	NC_007793	1929115	0	A	C	bias_e_value=19620.4	bias_p_value=0.00672515	consensus_score=922.4	fisher_strand_p_value=0.000862009	frequency=1	ks_quality_p_value=0.964021	major_base=C	major_cov=334/9	major_frequency=9.372e-01	minor_base=A	minor_cov=18/5	new_cov=334/9	polymorphism_frequency=9.372e-01	polymorphism_score=34.9	prediction=consensus	ref_cov=18/5	total_cov=352/14
RA	2060	.	NC_007793	1929116	0	G	T	bias_e_value=13523.6	bias_p_value=0.0046354	consensus_score=1018.3	fisher_strand_p_value=0.000689369	frequency=1	ks_quality_p_value=0.789588	major_base=T	major_cov=335/9	major_frequency=9.399e-01	minor_base=G	minor_cov=17/5	new_cov=335/9	polymorphism_frequency=9.399e-01	polymorphism_score=37.3	prediction=consensus	ref_cov=17/5	total_cov=352/14
RA	2061	.	NC_007793	1929117	0	G	T	bias_e_value=9910.88	bias_p_value=0.00339708	consensus_score=1022.0	fisher_strand_p_value=0.000689369	frequency=1	ks_quality_p_value=0.555735	major_base=T	major_cov=335/9	major_frequency=9.399e-01	minor_base=G	minor_cov=17/5	new_cov=335/9	polymorphism_frequency=9.399e-01	polymorphism_score=36.7	prediction=consensus	ref_cov=17/5	total_cov=352/14
RA	2062	.	NC_007793	1929120	0	A	C	bias_e_value=9567.54	bias_p_value=0.0032794	consensus_score=923.1	fisher_strand_p_value=0.000689369	frequency=1	ks_quality_p_value=0.53409	major_base=C	major_cov=335/9	major_frequency=9.399e-01	minor_base=A	minor_cov=17/5	new_cov=335/9	polymorphism_frequency=9.399e-01	polymorphism_score=35.3	prediction=consensus	ref_cov=17/5	total_cov=352/14
RA	2063	.	NC_007793	1929122	0	G	A	bias_e_value=9384.81	bias_p_value=0.00321676	consensus_score=885.2	fisher_strand_p_value=0.000689369	frequency=1	ks_quality_p_value=0.522615	major_base=A	major_cov=335/9	major_frequency=9.399e-01	minor_base=G	minor_cov=17/5	new_cov=335/9	polymorphism_frequency=9.399e-01	polymorphism_score=23.2	prediction=consensus	ref_cov=17/5	total_cov=352/14
RA	2064	.	NC_007793	1929123	0	C	A	bias_e_value=4000.84	bias_p_value=0.00137134	consensus_score=949.2	fisher_strand_p_value=0.000689369	frequency=1	ks_quality_p_value=0.201287	major_base=A	major_cov=335/9	major_frequency=9.399e-01	minor_base=C	minor_cov=17/5	new_cov=335/9	polymorphism_frequency=9.399e-01	polymorphism_score=39.9	prediction=consensus	ref_cov=17/5	total_cov=352/14
RA	2065	.	NC_007793	1929125	0	T	C	bias_e_value=10916.7	bias_p_value=0.00374185	consensus_score=862.4	fisher_strand_p_value=0.000689369	frequency=1	ks_quality_p_value=0.619757	major_base=C	major_cov=335/9	major_frequency=9.399e-01	minor_base=T	minor_cov=17/5	new_cov=335/9	polymorphism_frequency=9.399e-01	polymorphism_score=24.6	prediction=consensus	ref_cov=17/5	total_cov=352/14
RA	2066	.	NC_007793	1929167	0	C	T	bias_e_value=0.25051	bias_p_value=8.58655e-08	consensus_score=859.8	fisher_strand_p_value=1.24557e-08	frequency=1	ks_quality_p_value=0.339923	major_base=T	major_cov=313/1	major_frequency=9.573e-01	minor_base=C	minor_cov=8/6	new_cov=313/1	polymorphism_frequency=9.573e-01	polymorphism_score=9.1	prediction=consensus	ref_cov=8/6	total_cov=321/7
RA	2067	.	NC_007793	1929168	0	A	G	bias_e_value=0.326976	bias_p_value=1.12075e-07	consensus_score=854.5	fisher_strand_p_value=7.13689e-09	frequency=1	ks_quality_p_value=0.785189	major_base=G	major_cov=314/1	major_frequency=9.604e-01	minor_base=A	minor_cov=7/6	new_cov=314/1	polymorphism_frequency=9.604e-01	polymorphism_score=10.1	prediction=consensus	ref_cov=7/6	total_cov=321/7
RA	2068	.	NC_007793	1929175	0	T	A	bias_e_value=0.235053	bias_p_value=8.05676e-08	consensus_score=729.8	fisher_strand_p_value=2.41298e-08	frequency=1	ks_quality_p_value=0.164098	major_base=A	major_cov=254/1	major_frequency=9.515e-01	minor_base=T	minor_cov=7/6	new_cov=254/1	polymorphism_frequency=9.515e-01	polymorphism_score=16.3	prediction=consensus	ref_cov=7/6	total_cov=262/7
RA	2069	.	NC_007793	1929178	0	T	A	bias_e_value=1.29913	bias_p_value=4.45294e-07	consensus_score=695.6	fisher_strand_p_value=2.46801e-08	frequency=1	ks_quality_p_value=0.972924	major_base=A	major_cov=253/1	major_frequency=9.513e-01	minor_base=T	minor_cov=7/6	new_cov=253/1	polymorphism_frequency=9.513e-01	polymorphism_score=15.3	prediction=consensus	ref_cov=7/6	total_cov=262/7
RA	2070	.	NC_007793	1929180	0	T	A	bias_e_value=0.824628	bias_p_value=2.82652e-07	consensus_score=706.7	fisher_strand_p_value=2.35937e-08	frequency=1	ks_quality_p_value=0.629704	major_base=A	major_cov=255/1	major_frequency=9.517e-01	minor_base=T	minor_cov=7/6	new_cov=255/1	polymorphism_frequency=9.517e-01	polymorphism_score=17.0	prediction=consensus	ref_cov=7/6	total_cov=262/7
RA	2071	.	NC_007793	1929191	0	A	T	bias_e_value=8587.76	bias_p_value=0.00294357	consensus_score=20.4	fisher_strand_p_value=0.000386997	frequency=7.000e-01	ks_quality_p_value=0.84246	major_base=T	major_cov=14/0	major_frequency=7.000e-01	minor_base=A	minor_cov=1/5	new_cov=14/0	polymorphism_frequency=7.000e-01	polymorphism_score=10.2	prediction=polymorphism	ref_cov=1/5	total_cov=15/5
RA	2072	.	NC_007793	1934278	0	C	T	consensus_score=31.4	frequency=1	major_base=T	major_cov=3/10	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=3/10	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=3/10
RA	2073	.	NC_007793	1945182	0	C	G	consensus_score=17.7	frequency=1	major_base=G	major_cov=1/8	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/8	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/8
RA	2074	.	NC_007793	1957984	0	A	T	consensus_score=47.6	frequency=1	major_base=T	major_cov=0/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/19
RA	2075	.	NC_007793	1958045	0	C	T	consensus_score=55.8	frequency=1	major_base=T	major_cov=9/12	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=9/12	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=9/12
RA	2076	.	NC_007793	1959221	1	.	A	bias_e_value=1082720	bias_p_value=0.371118	consensus_score=22.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.118442	major_base=A	major_cov=7/3	major_frequency=8.333e-01	minor_base=.	minor_cov=2/0	new_cov=7/3	polymorphism_frequency=8.333e-01	polymorphism_score=0.3	prediction=consensus	ref_cov=2/0	total_cov=10/3
RA	2077	.	NC_007793	1959504	0	T	A	consensus_score=14.1	frequency=1	major_base=A	major_cov=2/5	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/5	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/5
RA	2078	.	NC_007793	1961069	0	T	A	bias_e_value=1938190	bias_p_value=0.66434	consensus_score=66.5	fisher_strand_p_value=0.302625	frequency=3.036e-01	ks_quality_p_value=1	major_base=T	major_cov=4/35	major_frequency=6.964e-01	minor_base=A	minor_cov=0/17	new_cov=0/17	polymorphism_frequency=3.036e-01	polymorphism_score=17.4	prediction=polymorphism	ref_cov=4/35	total_cov=4/55
RA	2079	.	NC_007793	1961071	0	A	C	bias_e_value=1884350	bias_p_value=0.645885	consensus_score=64.3	fisher_strand_p_value=0.287506	frequency=3.448e-01	ks_quality_p_value=1	major_base=A	major_cov=4/34	major_frequency=6.552e-01	minor_base=C	minor_cov=0/20	new_cov=0/20	polymorphism_frequency=3.448e-01	polymorphism_score=17.6	prediction=polymorphism	ref_cov=4/34	total_cov=4/54
RA	2080	.	NC_007793	1961074	0	A	C	bias_e_value=1924690	bias_p_value=0.659711	consensus_score=62.9	fisher_strand_p_value=0.298772	frequency=3.077e-01	ks_quality_p_value=1	major_base=A	major_cov=4/32	major_frequency=6.923e-01	minor_base=C	minor_cov=0/16	new_cov=0/16	polymorphism_frequency=3.077e-01	polymorphism_score=15.9	prediction=polymorphism	ref_cov=4/32	total_cov=4/57
RA	2081	.	NC_007793	1961077	0	T	C	bias_e_value=2588030	bias_p_value=0.887079	consensus_score=71.8	fisher_strand_p_value=0.564133	frequency=2.281e-01	ks_quality_p_value=1	major_base=T	major_cov=4/40	major_frequency=7.719e-01	minor_base=C	minor_cov=0/13	new_cov=0/13	polymorphism_frequency=2.281e-01	polymorphism_score=11.0	prediction=polymorphism	ref_cov=4/40	total_cov=4/57
RA	2082	.	NC_007793	1961079	0	A	C	bias_e_value=2587910	bias_p_value=0.887039	consensus_score=74.0	fisher_strand_p_value=0.564062	frequency=2.632e-01	ks_quality_p_value=1	major_base=A	major_cov=4/38	major_frequency=7.368e-01	minor_base=C	minor_cov=0/15	new_cov=0/15	polymorphism_frequency=2.632e-01	polymorphism_score=10.5	prediction=polymorphism	ref_cov=4/38	total_cov=4/53
RA	2083	.	NC_007793	1961083	0	C	A	bias_e_value=692455	bias_p_value=0.237348	consensus_score=51.9	fisher_strand_p_value=0.306245	frequency=2.982e-01	ks_quality_p_value=0.205926	major_base=C	major_cov=4/36	major_frequency=7.018e-01	minor_base=A	minor_cov=0/17	new_cov=0/17	polymorphism_frequency=2.982e-01	polymorphism_score=18.3	prediction=polymorphism	ref_cov=4/36	total_cov=4/55
RA	2084	.	NC_007793	1966923	0	C	G	bias_e_value=21428.3	bias_p_value=0.00734484	consensus_score=18.5	fisher_strand_p_value=0.00309598	frequency=3.158e-01	ks_quality_p_value=0.296836	major_base=C	major_cov=3/10	major_frequency=6.842e-01	minor_base=G	minor_cov=6/0	new_cov=6/0	polymorphism_frequency=3.158e-01	polymorphism_score=12.2	prediction=polymorphism	ref_cov=3/10	total_cov=9/10
RA	2085	.	NC_007793	1969312	0	T	G	bias_e_value=75075.7	bias_p_value=0.0257332	consensus_score=41.0	fisher_strand_p_value=0.00806182	frequency=3.673e-01	ks_quality_p_value=0.488254	major_base=T	major_cov=21/10	major_frequency=6.327e-01	minor_base=G	minor_cov=18/0	new_cov=18/0	polymorphism_frequency=3.673e-01	polymorphism_score=42.8	prediction=polymorphism	ref_cov=21/10	total_cov=39/10
RA	2086	.	NC_007793	1969545	0	C	A	bias_e_value=2917470	bias_p_value=1	consensus_score=385.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=130/9	major_frequency=9.929e-01	minor_base=G	minor_cov=1/0	new_cov=130/9	polymorphism_frequency=9.929e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=131/9
RA	2087	.	NC_007793	1977282	0	G	A	consensus_score=84.6	frequency=1	major_base=A	major_cov=7/24	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=7/24	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=7/24
RA	2088	.	NC_007793	1980852	0	T	A	consensus_score=117.1	frequency=1	major_base=A	major_cov=0/41	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/41	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/41
RA	2089	.	NC_007793	1992545	0	C	T	consensus_score=33.2	frequency=1	major_base=T	major_cov=2/13	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/13	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/13
RA	2090	.	NC_007793	1997484	0	A	T	bias_e_value=2917470	bias_p_value=1	consensus_score=361.0	fisher_strand_p_value=1	frequency=2.903e-01	ks_quality_p_value=0.999633	major_base=A	major_cov=0/176	major_frequency=7.097e-01	minor_base=T	minor_cov=0/72	new_cov=0/72	polymorphism_frequency=2.903e-01	polymorphism_score=150.5	prediction=polymorphism	ref_cov=0/176	total_cov=0/248
RA	2091	.	NC_007793	1997489	0	G	C	bias_e_value=2917370	bias_p_value=0.999965	consensus_score=373.3	fisher_strand_p_value=1	frequency=3.083e-01	ks_quality_p_value=0.991695	major_base=G	major_cov=0/175	major_frequency=6.917e-01	minor_base=C	minor_cov=0/78	new_cov=0/78	polymorphism_frequency=3.083e-01	polymorphism_score=200.5	prediction=polymorphism	ref_cov=0/175	total_cov=0/253
RA	2092	.	NC_007793	2000211	0	C	G	bias_e_value=895044	bias_p_value=0.306788	consensus_score=61.0	fisher_strand_p_value=0.196472	frequency=3.182e-01	ks_quality_p_value=0.458234	major_base=C	major_cov=42/3	major_frequency=6.818e-01	minor_base=G	minor_cov=17/4	new_cov=17/4	polymorphism_frequency=3.182e-01	polymorphism_score=52.2	prediction=polymorphism	ref_cov=42/3	total_cov=59/7
RA	2093	.	NC_007793	2000213	0	A	C	bias_e_value=80784.6	bias_p_value=0.02769	consensus_score=60.4	fisher_strand_p_value=0.19324	frequency=3.134e-01	ks_quality_p_value=0.0222129	major_base=A	major_cov=43/3	major_frequency=6.866e-01	minor_base=C	minor_cov=17/4	new_cov=17/4	polymorphism_frequency=3.134e-01	polymorphism_score=44.5	prediction=polymorphism	ref_cov=43/3	total_cov=60/7
RA	2094	.	NC_007793	2000214	0	G	A	bias_e_value=710150	bias_p_value=0.243413	consensus_score=60.5	fisher_strand_p_value=0.180548	frequency=2.923e-01	ks_quality_p_value=0.361524	major_base=G	major_cov=43/3	major_frequency=7.077e-01	minor_base=A	minor_cov=15/4	new_cov=15/4	polymorphism_frequency=2.923e-01	polymorphism_score=31.5	prediction=polymorphism	ref_cov=43/3	total_cov=60/7
RA	2095	.	NC_007793	2000215	0	A	G	bias_e_value=17685.4	bias_p_value=0.0060619	consensus_score=68.4	fisher_strand_p_value=0.00291375	frequency=1	ks_quality_p_value=0.253365	major_base=G	major_cov=58/4	major_frequency=9.394e-01	minor_base=A	minor_cov=1/3	new_cov=58/4	polymorphism_frequency=9.394e-01	polymorphism_score=0.3	prediction=consensus	ref_cov=1/3	total_cov=60/7
RA	2096	.	NC_007793	2000230	0	A	G	bias_e_value=18107.8	bias_p_value=0.00620668	consensus_score=95.6	fisher_strand_p_value=0.00146657	frequency=1	ks_quality_p_value=0.517097	major_base=G	major_cov=75/4	major_frequency=9.518e-01	minor_base=A	minor_cov=1/3	new_cov=75/4	polymorphism_frequency=9.518e-01	polymorphism_score=-0.0	prediction=consensus	ref_cov=1/3	total_cov=76/7
RA	2097	.	NC_007793	2000232	0	G	A	bias_e_value=242535	bias_p_value=0.0831321	consensus_score=82.6	fisher_strand_p_value=0.0888454	frequency=2.771e-01	ks_quality_p_value=0.182731	major_base=G	major_cov=57/3	major_frequency=7.229e-01	minor_base=A	minor_cov=19/4	new_cov=19/4	polymorphism_frequency=2.771e-01	polymorphism_score=37.8	prediction=polymorphism	ref_cov=57/3	total_cov=76/7
RA	2098	.	NC_007793	2000233	0	A	G	bias_e_value=416582	bias_p_value=0.142789	consensus_score=86.8	fisher_strand_p_value=0.0761527	frequency=2.651e-01	ks_quality_p_value=0.422668	major_base=A	major_cov=58/3	major_frequency=7.349e-01	minor_base=G	minor_cov=18/4	new_cov=18/4	polymorphism_frequency=2.651e-01	polymorphism_score=32.7	prediction=polymorphism	ref_cov=58/3	total_cov=76/7
RA	2099	.	NC_007793	2000242	0	T	C	bias_e_value=771412	bias_p_value=0.264411	consensus_score=88.4	fisher_strand_p_value=0.0731333	frequency=2.619e-01	ks_quality_p_value=1	major_base=T	major_cov=59/3	major_frequency=7.381e-01	minor_base=C	minor_cov=18/4	new_cov=18/4	polymorphism_frequency=2.619e-01	polymorphism_score=30.7	prediction=polymorphism	ref_cov=59/3	total_cov=77/7
RA	2100	.	NC_007793	2000246	0	A	G	bias_e_value=1995.73	bias_p_value=0.000684063	consensus_score=77.6	fisher_strand_p_value=0.000528549	frequency=7.126e-01	ks_quality_p_value=0.121486	major_base=G	major_cov=61/1	major_frequency=7.126e-01	minor_base=A	minor_cov=18/7	new_cov=61/1	polymorphism_frequency=7.126e-01	polymorphism_score=47.4	prediction=polymorphism	ref_cov=18/7	total_cov=79/8
RA	2101	.	NC_007793	2000247	0	G	T	bias_e_value=3589.5	bias_p_value=0.00123035	consensus_score=88.3	fisher_strand_p_value=0.107291	frequency=2.529e-01	ks_quality_p_value=0.00114635	major_base=G	major_cov=61/4	major_frequency=7.471e-01	minor_base=T	minor_cov=18/4	new_cov=18/4	polymorphism_frequency=2.529e-01	polymorphism_score=52.5	prediction=polymorphism	ref_cov=61/4	total_cov=79/8
RA	2102	.	NC_007793	2000252	0	C	A	bias_e_value=1490250	bias_p_value=0.510803	consensus_score=87.6	fisher_strand_p_value=0.194736	frequency=2.558e-01	ks_quality_p_value=0.992038	major_base=C	major_cov=60/4	major_frequency=7.442e-01	minor_base=A	minor_cov=18/4	new_cov=18/4	polymorphism_frequency=2.558e-01	polymorphism_score=42.0	prediction=polymorphism	ref_cov=60/4	total_cov=79/8
RA	2103	.	NC_007793	2000256	0	G	A	bias_e_value=11342.2	bias_p_value=0.0038877	consensus_score=88.5	fisher_strand_p_value=0.107291	frequency=2.529e-01	ks_quality_p_value=0.00415778	major_base=G	major_cov=61/4	major_frequency=7.471e-01	minor_base=A	minor_cov=18/4	new_cov=18/4	polymorphism_frequency=2.529e-01	polymorphism_score=35.5	prediction=polymorphism	ref_cov=61/4	total_cov=79/8
RA	2104	.	NC_007793	2000258	0	A	G	bias_e_value=491564	bias_p_value=0.16849	consensus_score=89.7	fisher_strand_p_value=0.107291	frequency=2.529e-01	ks_quality_p_value=0.372049	major_base=A	major_cov=61/4	major_frequency=7.471e-01	minor_base=G	minor_cov=18/4	new_cov=18/4	polymorphism_frequency=2.529e-01	polymorphism_score=32.4	prediction=polymorphism	ref_cov=61/4	total_cov=79/8
RA	2105	.	NC_007793	2000261	0	T	A	bias_e_value=1415100	bias_p_value=0.485044	consensus_score=88.8	fisher_strand_p_value=0.194736	frequency=2.558e-01	ks_quality_p_value=0.913523	major_base=T	major_cov=60/4	major_frequency=7.442e-01	minor_base=A	minor_cov=18/4	new_cov=18/4	polymorphism_frequency=2.558e-01	polymorphism_score=45.1	prediction=polymorphism	ref_cov=60/4	total_cov=79/8
RA	2106	.	NC_007793	2000262	0	T	C	bias_e_value=1011640	bias_p_value=0.346753	consensus_score=90.8	fisher_strand_p_value=0.107291	frequency=2.529e-01	ks_quality_p_value=0.999855	major_base=T	major_cov=61/4	major_frequency=7.471e-01	minor_base=C	minor_cov=18/4	new_cov=18/4	polymorphism_frequency=2.529e-01	polymorphism_score=32.7	prediction=polymorphism	ref_cov=61/4	total_cov=79/8
RA	2107	.	NC_007793	2000270	0	T	C	bias_e_value=852204	bias_p_value=0.292104	consensus_score=93.0	fisher_strand_p_value=0.0840166	frequency=2.353e-01	ks_quality_p_value=1	major_base=T	major_cov=61/4	major_frequency=7.647e-01	minor_base=C	minor_cov=16/4	new_cov=16/4	polymorphism_frequency=2.353e-01	polymorphism_score=25.9	prediction=polymorphism	ref_cov=61/4	total_cov=77/8
RA	2108	.	NC_007793	2000274	0	T	C	bias_e_value=10719.9	bias_p_value=0.00367439	consensus_score=90.0	fisher_strand_p_value=0.000497866	frequency=1	ks_quality_p_value=0.840704	major_base=C	major_cov=69/4	major_frequency=9.605e-01	minor_base=T	minor_cov=0/3	new_cov=69/4	polymorphism_frequency=9.605e-01	polymorphism_score=-2.6	prediction=consensus	ref_cov=0/3	total_cov=69/7
RA	2109	.	NC_007793	2000294	0	A	G	bias_e_value=295097	bias_p_value=0.101148	consensus_score=58.2	fisher_strand_p_value=0.0465116	frequency=1	ks_quality_p_value=0.446057	major_base=G	major_cov=41/1	major_frequency=9.767e-01	minor_base=A	minor_cov=0/1	new_cov=41/1	polymorphism_frequency=9.767e-01	polymorphism_score=-4.8	prediction=consensus	ref_cov=0/1	total_cov=41/2
RA	2110	.	NC_007793	2000301	0	C	A	bias_e_value=882498	bias_p_value=0.302487	consensus_score=20.7	fisher_strand_p_value=0.0952381	frequency=1	ks_quality_p_value=0.92664	major_base=A	major_cov=19/1	major_frequency=9.524e-01	minor_base=C	minor_cov=0/1	new_cov=19/1	polymorphism_frequency=9.524e-01	polymorphism_score=-4.1	prediction=consensus	ref_cov=0/1	total_cov=19/2
RA	2111	.	NC_007793	2000302	0	A	C	bias_e_value=660591	bias_p_value=0.226426	consensus_score=20.1	fisher_strand_p_value=0.0952381	frequency=1	ks_quality_p_value=0.621145	major_base=C	major_cov=19/1	major_frequency=9.524e-01	minor_base=A	minor_cov=0/1	new_cov=19/1	polymorphism_frequency=9.524e-01	polymorphism_score=-3.9	prediction=consensus	ref_cov=0/1	total_cov=19/2
RA	2112	.	NC_007793	2000303	0	A	G	bias_e_value=252516	bias_p_value=0.086553	consensus_score=19.6	fisher_strand_p_value=0.0952381	frequency=1	ks_quality_p_value=0.179237	major_base=G	major_cov=19/1	major_frequency=9.524e-01	minor_base=A	minor_cov=0/1	new_cov=19/1	polymorphism_frequency=9.524e-01	polymorphism_score=-4.4	prediction=consensus	ref_cov=0/1	total_cov=19/2
RA	2113	.	NC_007793	2000304	0	C	A	bias_e_value=252516	bias_p_value=0.086553	consensus_score=20.1	fisher_strand_p_value=0.0952381	frequency=1	ks_quality_p_value=0.179237	major_base=A	major_cov=19/1	major_frequency=9.524e-01	minor_base=C	minor_cov=0/1	new_cov=19/1	polymorphism_frequency=9.524e-01	polymorphism_score=-3.7	prediction=consensus	ref_cov=0/1	total_cov=19/2
RA	2114	.	NC_007793	2000306	0	T	G	bias_e_value=613344	bias_p_value=0.210232	consensus_score=19.9	fisher_strand_p_value=0.0952381	frequency=1	ks_quality_p_value=0.562035	major_base=G	major_cov=19/1	major_frequency=9.524e-01	minor_base=T	minor_cov=0/1	new_cov=19/1	polymorphism_frequency=9.524e-01	polymorphism_score=-3.8	prediction=consensus	ref_cov=0/1	total_cov=19/2
RA	2115	.	NC_007793	2000310	0	C	T	bias_e_value=824622	bias_p_value=0.28265	consensus_score=20.1	fisher_strand_p_value=0.0952381	frequency=1	ks_quality_p_value=0.84246	major_base=T	major_cov=19/1	major_frequency=9.524e-01	minor_base=C	minor_cov=0/1	new_cov=19/1	polymorphism_frequency=9.524e-01	polymorphism_score=-4.7	prediction=consensus	ref_cov=0/1	total_cov=19/2
RA	2116	.	NC_007793	2000980	1	.	C	bias_e_value=28414.4	bias_p_value=0.00973939	consensus_score=233.8	fisher_strand_p_value=0.0217143	frequency=1	ks_quality_p_value=0.0584874	major_base=C	major_cov=0/107	major_frequency=8.492e-01	minor_base=.	minor_cov=2/17	new_cov=0/107	polymorphism_frequency=8.492e-01	polymorphism_score=61.8	prediction=consensus	ref_cov=2/17	total_cov=2/125
RA	2117	.	NC_007793	2001405	0	A	C	bias_e_value=4429.25	bias_p_value=0.00151818	consensus_score=13.4	fisher_strand_p_value=0.0001554	frequency=5.000e-01	ks_quality_p_value=1	major_base=A	major_cov=0/8	major_frequency=5.000e-01	minor_base=C	minor_cov=8/0	new_cov=8/0	polymorphism_frequency=5.000e-01	polymorphism_score=16.4	prediction=polymorphism	ref_cov=0/8	total_cov=8/8
RA	2118	.	NC_007793	2001413	0	A	G	bias_e_value=4429.25	bias_p_value=0.00151818	consensus_score=10.6	fisher_strand_p_value=0.0001554	frequency=5.000e-01	ks_quality_p_value=1	major_base=A	major_cov=0/8	major_frequency=5.000e-01	minor_base=G	minor_cov=8/0	new_cov=8/0	polymorphism_frequency=5.000e-01	polymorphism_score=11.0	prediction=polymorphism	ref_cov=0/8	total_cov=8/8
RA	2119	.	NC_007793	2001417	0	G	A	bias_e_value=4429.25	bias_p_value=0.00151818	consensus_score=9.0	fisher_strand_p_value=0.0001554	frequency=5.000e-01	ks_quality_p_value=1	major_base=G	major_cov=0/8	major_frequency=5.000e-01	minor_base=A	minor_cov=8/0	new_cov=8/0	polymorphism_frequency=5.000e-01	polymorphism_score=12.0	prediction=polymorphism	ref_cov=0/8	total_cov=8/8
RA	2120	.	NC_007793	2001418	0	A	C	bias_e_value=4429.25	bias_p_value=0.00151818	consensus_score=13.4	fisher_strand_p_value=0.0001554	frequency=5.000e-01	ks_quality_p_value=1	major_base=A	major_cov=0/8	major_frequency=5.000e-01	minor_base=C	minor_cov=8/0	new_cov=8/0	polymorphism_frequency=5.000e-01	polymorphism_score=17.5	prediction=polymorphism	ref_cov=0/8	total_cov=8/8
RA	2121	.	NC_007793	2001421	0	A	C	bias_e_value=4429.25	bias_p_value=0.00151818	consensus_score=13.5	fisher_strand_p_value=0.0001554	frequency=5.000e-01	ks_quality_p_value=1	major_base=A	major_cov=0/8	major_frequency=5.000e-01	minor_base=C	minor_cov=8/0	new_cov=8/0	polymorphism_frequency=5.000e-01	polymorphism_score=18.5	prediction=polymorphism	ref_cov=0/8	total_cov=8/8
RA	2122	.	NC_007793	2001422	0	C	G	bias_e_value=4429.25	bias_p_value=0.00151818	consensus_score=14.3	fisher_strand_p_value=0.0001554	frequency=5.000e-01	ks_quality_p_value=1	major_base=C	major_cov=0/8	major_frequency=5.000e-01	minor_base=G	minor_cov=8/0	new_cov=8/0	polymorphism_frequency=5.000e-01	polymorphism_score=17.3	prediction=polymorphism	ref_cov=0/8	total_cov=8/8
RA	2123	.	NC_007793	2001423	0	A	C	bias_e_value=4429.25	bias_p_value=0.00151818	consensus_score=13.6	fisher_strand_p_value=0.0001554	frequency=5.000e-01	ks_quality_p_value=1	major_base=A	major_cov=0/8	major_frequency=5.000e-01	minor_base=C	minor_cov=8/0	new_cov=8/0	polymorphism_frequency=5.000e-01	polymorphism_score=18.1	prediction=polymorphism	ref_cov=0/8	total_cov=8/8
RA	2124	.	NC_007793	2001432	0	G	A	bias_e_value=4429.25	bias_p_value=0.00151818	consensus_score=9.2	fisher_strand_p_value=0.0001554	frequency=5.000e-01	ks_quality_p_value=1	major_base=G	major_cov=0/8	major_frequency=5.000e-01	minor_base=A	minor_cov=8/0	new_cov=8/0	polymorphism_frequency=5.000e-01	polymorphism_score=11.6	prediction=polymorphism	ref_cov=0/8	total_cov=8/8
RA	2125	.	NC_007793	2001434	0	A	G	bias_e_value=4429.25	bias_p_value=0.00151818	consensus_score=11.0	fisher_strand_p_value=0.0001554	frequency=5.000e-01	ks_quality_p_value=1	major_base=A	major_cov=0/8	major_frequency=5.000e-01	minor_base=G	minor_cov=8/0	new_cov=8/0	polymorphism_frequency=5.000e-01	polymorphism_score=12.4	prediction=polymorphism	ref_cov=0/8	total_cov=8/8
RA	2126	.	NC_007793	2001437	0	T	C	bias_e_value=7861.38	bias_p_value=0.00269459	consensus_score=4.5	fisher_strand_p_value=0.0013986	frequency=5.625e-01	ks_quality_p_value=0.211072	major_base=C	major_cov=8/1	major_frequency=5.625e-01	minor_base=T	minor_cov=0/7	new_cov=8/1	polymorphism_frequency=5.625e-01	polymorphism_score=10.5	prediction=polymorphism	ref_cov=0/7	total_cov=8/8
RA	2127	.	NC_007793	2001443	0	A	C	bias_e_value=3958.81	bias_p_value=0.00135693	consensus_score=14.1	fisher_strand_p_value=0.0001554	frequency=5.000e-01	ks_quality_p_value=0.882497	major_base=A	major_cov=0/8	major_frequency=5.000e-01	minor_base=C	minor_cov=8/0	new_cov=8/0	polymorphism_frequency=5.000e-01	polymorphism_score=18.4	prediction=polymorphism	ref_cov=0/8	total_cov=8/8
RA	2128	.	NC_007793	2001444	0	C	T	bias_e_value=30897.8	bias_p_value=0.0105906	consensus_score=6.4	fisher_strand_p_value=0.0013986	frequency=5.625e-01	ks_quality_p_value=1	major_base=T	major_cov=8/1	major_frequency=5.625e-01	minor_base=C	minor_cov=0/7	new_cov=8/1	polymorphism_frequency=5.625e-01	polymorphism_score=10.4	prediction=polymorphism	ref_cov=0/7	total_cov=8/8
RA	2129	.	NC_007793	2015166	0	C	T	consensus_score=138.5	frequency=1	major_base=T	major_cov=0/52	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/52	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/52
RA	2130	.	NC_007793	2016024	0	C	G	bias_e_value=89038	bias_p_value=0.0305189	consensus_score=26.9	fisher_strand_p_value=1	frequency=4.516e-01	ks_quality_p_value=0.00481706	major_base=C	major_cov=0/51	major_frequency=5.484e-01	minor_base=G	minor_cov=0/42	new_cov=0/42	polymorphism_frequency=4.516e-01	polymorphism_score=119.3	prediction=polymorphism	ref_cov=0/51	total_cov=0/93
RA	2131	.	NC_007793	2016465	0	T	C	bias_e_value=2748950	bias_p_value=0.942237	consensus_score=49.5	fisher_strand_p_value=1	frequency=2.857e-01	ks_quality_p_value=0.679965	major_base=T	major_cov=1/29	major_frequency=7.143e-01	minor_base=C	minor_cov=0/12	new_cov=0/12	polymorphism_frequency=2.857e-01	polymorphism_score=16.2	prediction=polymorphism	ref_cov=1/29	total_cov=1/42
RA	2132	.	NC_007793	2019080	0	C	A	consensus_score=156.0	frequency=1	major_base=A	major_cov=2/52	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/52	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/52
RA	2133	.	NC_007793	2034247	0	G	T	consensus_score=17.6	frequency=1	major_base=T	major_cov=0/8	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/8	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/8
RA	2134	.	NC_007793	2036248	0	G	A	bias_e_value=2243980	bias_p_value=0.769154	consensus_score=119.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.40289	major_base=A	major_cov=5/39	major_frequency=9.778e-01	minor_base=G	minor_cov=0/1	new_cov=5/39	polymorphism_frequency=9.778e-01	polymorphism_score=-5.1	prediction=consensus	ref_cov=0/1	total_cov=5/41
RA	2135	.	NC_007793	2051571	0	A	C	bias_e_value=2917470	bias_p_value=1	consensus_score=170.1	fisher_strand_p_value=1	frequency=2.844e-01	ks_quality_p_value=1	major_base=A	major_cov=2/76	major_frequency=7.156e-01	minor_base=C	minor_cov=0/31	new_cov=0/31	polymorphism_frequency=2.844e-01	polymorphism_score=19.6	prediction=polymorphism	ref_cov=2/76	total_cov=2/113
RA	2136	.	NC_007793	2051965	0	T	C	consensus_score=280.3	frequency=1	major_base=C	major_cov=2/97	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/97	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/97
RA	2137	.	NC_007793	2052494	0	C	T	bias_e_value=3184.53	bias_p_value=0.00109154	consensus_score=8.3	fisher_strand_p_value=0.000107686	frequency=4.000e-01	ks_quality_p_value=1	major_base=C	major_cov=3/12	major_frequency=6.000e-01	minor_base=T	minor_cov=10/0	new_cov=10/0	polymorphism_frequency=4.000e-01	polymorphism_score=16.8	prediction=polymorphism	ref_cov=3/12	total_cov=13/12
RA	2138	.	NC_007793	2057596	0	T	C	consensus_score=52.4	frequency=1	major_base=C	major_cov=0/22	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/22	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/22
RA	2139	.	NC_007793	2058531	0	C	A	bias_e_value=2917470	bias_p_value=1	consensus_score=369.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=3/126	major_frequency=9.923e-01	minor_base=T	minor_cov=0/1	new_cov=3/126	polymorphism_frequency=9.923e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=3/127
RA	2140	.	NC_007793	2063322	0	A	G	consensus_score=84.8	frequency=1	major_base=G	major_cov=2/31	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/31	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/31
RA	2141	.	NC_007793	2073215	0	T	C	bias_e_value=2917470	bias_p_value=1	consensus_score=9.2	fisher_strand_p_value=1	frequency=4.583e-01	ks_quality_p_value=1	major_base=T	major_cov=1/25	major_frequency=5.417e-01	minor_base=C	minor_cov=0/22	new_cov=0/22	polymorphism_frequency=4.583e-01	polymorphism_score=37.7	prediction=polymorphism	ref_cov=1/25	total_cov=1/47
RA	2142	.	NC_007793	2073220	0	C	G	bias_e_value=2787280	bias_p_value=0.955375	consensus_score=-5.6	fisher_strand_p_value=1	frequency=5.000e-01	ks_quality_p_value=0.716531	major_base=C	major_cov=1/26	major_frequency=5.000e-01	minor_base=G	minor_cov=0/27	new_cov=0/27	polymorphism_frequency=5.000e-01	polymorphism_score=75.5	prediction=polymorphism	ref_cov=1/26	total_cov=1/53
RA	2143	.	NC_007793	2073222	0	A	T	bias_e_value=1337490	bias_p_value=0.458443	consensus_score=-5.5	fisher_strand_p_value=1	frequency=5.000e-01	ks_quality_p_value=0.162868	major_base=A	major_cov=1/26	major_frequency=5.000e-01	minor_base=T	minor_cov=0/27	new_cov=0/27	polymorphism_frequency=5.000e-01	polymorphism_score=65.6	prediction=polymorphism	ref_cov=1/26	total_cov=1/53
RA	2144	.	NC_007793	2073230	0	A	G	bias_e_value=2874810	bias_p_value=0.985377	consensus_score=94.7	fisher_strand_p_value=1	frequency=2.419e-01	ks_quality_p_value=0.83393	major_base=A	major_cov=3/44	major_frequency=7.581e-01	minor_base=G	minor_cov=1/14	new_cov=1/14	polymorphism_frequency=2.419e-01	polymorphism_score=19.7	prediction=polymorphism	ref_cov=3/44	total_cov=4/62
RA	2145	.	NC_007793	2085036	0	G	A	consensus_score=247.9	frequency=1	major_base=A	major_cov=91/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=91/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=91/0
RA	2146	.	NC_007793	2085129	0	A	T	consensus_score=81.9	frequency=1	major_base=T	major_cov=29/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/1
RA	2147	.	NC_007793	2085398	0	A	G	bias_e_value=2589980	bias_p_value=0.887748	consensus_score=261.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.565302	major_base=G	major_cov=92/3	major_frequency=9.896e-01	minor_base=A	minor_cov=1/0	new_cov=92/3	polymorphism_frequency=9.896e-01	polymorphism_score=-5.6	prediction=consensus	ref_cov=1/0	total_cov=93/3
RA	2148	.	NC_007793	2085500	0	G	T	bias_e_value=2537610	bias_p_value=0.8698	consensus_score=232.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.535261	major_base=T	major_cov=73/7	major_frequency=9.877e-01	minor_base=C	minor_cov=1/0	new_cov=73/7	polymorphism_frequency=9.877e-01	polymorphism_score=-5.5	prediction=consensus	ref_cov=0/0	total_cov=74/7
RA	2149	.	NC_007793	2085565	0	T	C	consensus_score=118.0	frequency=1	major_base=C	major_cov=39/6	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=39/6	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=39/6
RA	2150	.	NC_007793	2085622	0	T	C	consensus_score=218.1	frequency=1	major_base=C	major_cov=77/7	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=77/7	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=77/7
RA	2151	.	NC_007793	2085894	0	G	A	bias_e_value=2915250	bias_p_value=0.999238	consensus_score=2606.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.961228	major_base=A	major_cov=10/1030	major_frequency=8.497e-01	minor_base=G	minor_cov=1/183	new_cov=10/1030	polymorphism_frequency=8.497e-01	polymorphism_score=272.4	prediction=consensus	ref_cov=1/183	total_cov=11/1271
RA	2152	.	NC_007793	2086256	0	G	A	bias_e_value=2916620	bias_p_value=0.99971	consensus_score=525.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.976007	major_base=A	major_cov=3/178	major_frequency=9.945e-01	minor_base=.	minor_cov=0/1	new_cov=3/178	polymorphism_frequency=9.945e-01	polymorphism_score=-4.3	prediction=consensus	ref_cov=0/0	total_cov=3/179
RA	2153	.	NC_007793	2086573	0	A	.	bias_e_value=2917460	bias_p_value=0.999996	consensus_score=92.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.997155	major_base=.	major_cov=1/25	major_frequency=9.630e-01	minor_base=A	minor_cov=0/1	new_cov=1/25	polymorphism_frequency=9.630e-01	polymorphism_score=-2.1	prediction=consensus	ref_cov=0/1	total_cov=1/26
RA	2154	.	NC_007793	2086574	0	T	.	bias_e_value=2917460	bias_p_value=0.999996	consensus_score=92.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.997155	major_base=.	major_cov=1/25	major_frequency=9.630e-01	minor_base=A	minor_cov=0/1	new_cov=1/25	polymorphism_frequency=9.630e-01	polymorphism_score=-2.6	prediction=consensus	ref_cov=0/0	total_cov=1/26
RA	2155	.	NC_007793	2087514	0	G	A	consensus_score=72.6	frequency=1	major_base=A	major_cov=2/29	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/29	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/29
RA	2156	.	NC_007793	2087525	0	C	T	bias_e_value=2917470	bias_p_value=1	consensus_score=262.2	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=2/100	major_frequency=9.903e-01	minor_base=G	minor_cov=0/1	new_cov=2/100	polymorphism_frequency=9.903e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/101
RA	2157	.	NC_007793	2087587	0	A	C	bias_e_value=2178910	bias_p_value=0.746851	consensus_score=860.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.379142	major_base=C	major_cov=2/326	major_frequency=9.939e-01	minor_base=A	minor_cov=0/2	new_cov=2/326	polymorphism_frequency=9.939e-01	polymorphism_score=-5.0	prediction=consensus	ref_cov=0/2	total_cov=2/328
RA	2158	.	NC_007793	2087964	0	G	C	consensus_score=34.1	frequency=1	major_base=C	major_cov=4/10	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=4/10	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=4/10
RA	2159	.	NC_007793	2088031	0	A	G	consensus_score=42.5	frequency=1	major_base=G	major_cov=1/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/19
RA	2160	.	NC_007793	2088066	1	.	A	bias_e_value=2857430	bias_p_value=0.979421	consensus_score=81.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.804109	major_base=A	major_cov=0/29	major_frequency=9.355e-01	minor_base=.	minor_cov=0/2	new_cov=0/29	polymorphism_frequency=9.355e-01	polymorphism_score=-0.7	prediction=consensus	ref_cov=0/2	total_cov=0/31
RA	2161	.	NC_007793	2088140	0	A	G	consensus_score=56.4	frequency=1	major_base=G	major_cov=2/21	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/21	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/21
RA	2162	.	NC_007793	2088192	0	C	T	consensus_score=15.6	frequency=1	major_base=T	major_cov=0/7	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/7	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/7
RA	2163	.	NC_007793	2088904	0	C	T	consensus_score=54.5	frequency=1	major_base=T	major_cov=0/22	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/22	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/22
RA	2164	.	NC_007793	2092528	0	C	T	consensus_score=33.6	frequency=1	major_base=T	major_cov=0/15	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/15	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/15
RA	2165	.	NC_007793	2092534	0	A	G	consensus_score=34.7	frequency=1	major_base=G	major_cov=0/15	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/15	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/15
RA	2166	.	NC_007793	2092537	0	T	A	consensus_score=38.3	frequency=1	major_base=A	major_cov=0/15	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/15	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/15
RA	2167	.	NC_007793	2092540	0	A	G	consensus_score=34.8	frequency=1	major_base=G	major_cov=0/15	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/15	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/15
RA	2168	.	NC_007793	2092546	0	A	C	consensus_score=34.7	frequency=1	major_base=C	major_cov=0/15	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/15	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/15
RA	2169	.	NC_007793	2092549	0	A	T	consensus_score=39.8	frequency=1	major_base=T	major_cov=0/15	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/15	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/15
RA	2170	.	NC_007793	2092552	0	T	C	consensus_score=34.1	frequency=1	major_base=C	major_cov=0/15	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/15	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/15
RA	2171	.	NC_007793	2092555	0	G	A	bias_e_value=2917470	bias_p_value=1	consensus_score=27.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=0/12	major_frequency=9.231e-01	minor_base=G	minor_cov=0/1	new_cov=0/12	polymorphism_frequency=9.231e-01	polymorphism_score=-4.5	prediction=consensus	ref_cov=0/1	total_cov=0/13
RA	2172	.	NC_007793	2092558	0	T	A	consensus_score=32.7	frequency=1	major_base=A	major_cov=0/13	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/13	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/13
RA	2173	.	NC_007793	2092564	0	A	G	consensus_score=27.2	frequency=1	major_base=G	major_cov=0/13	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/13	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/13
RA	2174	.	NC_007793	2092567	0	G	T	consensus_score=30.8	frequency=1	major_base=T	major_cov=0/13	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/13	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/13
RA	2175	.	NC_007793	2092573	0	T	A	consensus_score=23.9	frequency=1	major_base=A	major_cov=0/10	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/10	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/10
RA	2176	.	NC_007793	2092579	0	G	C	consensus_score=22.8	frequency=1	major_base=C	major_cov=0/11	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/11	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/11
RA	2177	.	NC_007793	2092583	0	T	C	consensus_score=28.1	frequency=1	major_base=C	major_cov=0/12	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/12	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/12
RA	2178	.	NC_007793	2092591	0	T	A	consensus_score=30.0	frequency=1	major_base=A	major_cov=0/13	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/13	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/13
RA	2179	.	NC_007793	2092837	0	T	C	consensus_score=16.2	frequency=1	major_base=C	major_cov=5/3	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=5/3	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=5/3
RA	2180	.	NC_007793	2092891	0	G	A	consensus_score=14.5	frequency=1	major_base=A	major_cov=2/5	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/5	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/5
RA	2181	.	NC_007793	2092897	0	G	A	consensus_score=10.8	frequency=1	major_base=A	major_cov=2/4	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/4	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/4
RA	2182	.	NC_007793	2093013	0	G	A	consensus_score=47.6	frequency=1	major_base=A	major_cov=1/17	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/17	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/17
RA	2183	.	NC_007793	2093018	0	C	T	consensus_score=44.8	frequency=1	major_base=T	major_cov=1/17	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/17	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/17
RA	2184	.	NC_007793	2093211	0	T	C	consensus_score=16.1	frequency=1	major_base=C	major_cov=0/8	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/8	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/8
RA	2185	.	NC_007793	2093730	0	T	C	consensus_score=12.6	frequency=1	major_base=C	major_cov=2/5	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/5	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/5
RA	2186	.	NC_007793	2093733	0	T	G	consensus_score=13.1	frequency=1	major_base=G	major_cov=2/5	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/5	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/5
RA	2187	.	NC_007793	2094008	0	G	T	consensus_score=16.4	frequency=1	major_base=T	major_cov=0/8	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/8	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/8
RA	2188	.	NC_007793	2094606	0	G	A	consensus_score=13.4	frequency=1	major_base=A	major_cov=1/6	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/6	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/6
RA	2189	.	NC_007793	2094628	0	A	G	consensus_score=12.7	frequency=1	major_base=G	major_cov=0/7	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/7	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/7
RA	2190	.	NC_007793	2098106	0	C	G	consensus_score=13.2	frequency=1	major_base=G	major_cov=5/2	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=5/2	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=5/2
RA	2191	.	NC_007793	2098112	0	T	C	consensus_score=10.4	frequency=1	major_base=C	major_cov=5/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=5/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=5/1
RA	2192	.	NC_007793	2098284	0	G	A	consensus_score=11.7	frequency=1	major_base=A	major_cov=0/6	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/6	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/6
RA	2193	.	NC_007793	2098359	0	A	T	consensus_score=19.9	frequency=1	major_base=T	major_cov=1/8	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/8	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/8
RA	2194	.	NC_007793	2098395	0	T	C	consensus_score=12.5	frequency=1	major_base=C	major_cov=1/6	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/6	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/6
RA	2195	.	NC_007793	2098407	0	G	A	consensus_score=17.4	frequency=1	major_base=A	major_cov=1/7	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/7	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/7
RA	2196	.	NC_007793	2098416	0	C	T	consensus_score=22.1	frequency=1	major_base=T	major_cov=1/9	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/9	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/9
RA	2197	.	NC_007793	2098428	0	A	G	consensus_score=15.3	frequency=1	major_base=G	major_cov=1/7	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/7	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/7
RA	2198	.	NC_007793	2098434	0	T	C	consensus_score=14.4	frequency=1	major_base=C	major_cov=1/7	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/7	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/7
RA	2199	.	NC_007793	2098446	0	C	T	consensus_score=16.7	frequency=1	major_base=T	major_cov=0/8	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/8	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/8
RA	2200	.	NC_007793	2098455	0	C	T	consensus_score=10.3	frequency=1	major_base=T	major_cov=1/5	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/5	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/5
RA	2201	.	NC_007793	2098458	0	A	G	consensus_score=10.3	frequency=1	major_base=G	major_cov=1/5	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/5	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/5
RA	2202	.	NC_007793	2098466	0	C	T	consensus_score=10.9	frequency=1	major_base=T	major_cov=1/5	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/5	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/5
RA	2203	.	NC_007793	2099190	0	T	A	consensus_score=10.4	frequency=1	major_base=A	major_cov=2/4	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/4	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/4
RA	2204	.	NC_007793	2099196	0	T	A	consensus_score=11.1	frequency=1	major_base=A	major_cov=2/4	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/4	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/4
RA	2205	.	NC_007793	2099202	0	G	T	consensus_score=12.4	frequency=1	major_base=T	major_cov=2/5	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/5	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/5
RA	2206	.	NC_007793	2099213	0	T	C	consensus_score=13.3	frequency=1	major_base=C	major_cov=2/5	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/5	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/5
RA	2207	.	NC_007793	2099214	0	T	A	consensus_score=14.2	frequency=1	major_base=A	major_cov=2/5	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/5	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/5
RA	2208	.	NC_007793	2099223	0	C	T	consensus_score=13.2	frequency=1	major_base=T	major_cov=2/5	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/5	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/5
RA	2209	.	NC_007793	2099226	0	A	T	consensus_score=12.2	frequency=1	major_base=T	major_cov=2/5	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/5	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/5
RA	2210	.	NC_007793	2110894	0	C	T	consensus_score=61.1	frequency=1	major_base=T	major_cov=4/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=4/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=4/20
RA	2211	.	NC_007793	2111076	0	A	C	bias_e_value=1293300	bias_p_value=0.443296	consensus_score=21.2	fisher_strand_p_value=1	frequency=7.143e-01	ks_quality_p_value=0.154638	major_base=C	major_cov=2/13	major_frequency=7.143e-01	minor_base=A	minor_cov=1/5	new_cov=2/13	polymorphism_frequency=7.143e-01	polymorphism_score=11.0	prediction=polymorphism	ref_cov=1/5	total_cov=3/18
RA	2212	.	NC_007793	2111103	0	C	T	consensus_score=17.7	frequency=1	major_base=T	major_cov=2/11	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/11	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/11
RA	2213	.	NC_007793	2111210	0	C	T	consensus_score=42.7	frequency=1	major_base=T	major_cov=3/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=3/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=3/20
RA	2214	.	NC_007793	2111221	0	T	C	consensus_score=43.0	frequency=1	major_base=C	major_cov=3/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=3/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=3/20
RA	2215	.	NC_007793	2111231	0	A	G	consensus_score=41.0	frequency=1	major_base=G	major_cov=3/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=3/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=3/20
RA	2216	.	NC_007793	2111559	0	C	T	consensus_score=17.7	frequency=1	major_base=T	major_cov=2/8	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/8	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/8
RA	2217	.	NC_007793	2111571	0	C	T	consensus_score=18.1	frequency=1	major_base=T	major_cov=2/9	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/9	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/9
RA	2218	.	NC_007793	2111591	0	T	G	bias_e_value=2917470	bias_p_value=1	consensus_score=-0.4	fisher_strand_p_value=1	frequency=5.000e-01	ks_quality_p_value=1	major_base=T	major_cov=1/6	major_frequency=5.000e-01	minor_base=G	minor_cov=1/6	new_cov=1/6	polymorphism_frequency=5.000e-01	polymorphism_score=16.0	prediction=polymorphism	ref_cov=1/6	total_cov=2/12
RA	2219	.	NC_007793	2111592	0	T	C	bias_e_value=2890390	bias_p_value=0.990718	consensus_score=-2.8	fisher_strand_p_value=1	frequency=5.000e-01	ks_quality_p_value=0.866878	major_base=T	major_cov=1/6	major_frequency=5.000e-01	minor_base=C	minor_cov=1/6	new_cov=1/6	polymorphism_frequency=5.000e-01	polymorphism_score=10.5	prediction=polymorphism	ref_cov=1/6	total_cov=2/12
RA	2220	.	NC_007793	2113226	0	C	T	consensus_score=24.4	frequency=1	major_base=T	major_cov=1/10	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/10	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/10
RA	2221	.	NC_007793	2113230	0	A	G	consensus_score=26.3	frequency=1	major_base=G	major_cov=1/11	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/11	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/11
RA	2222	.	NC_007793	2113233	0	C	T	consensus_score=25.3	frequency=1	major_base=T	major_cov=1/11	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/11	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/11
RA	2223	.	NC_007793	2113246	0	G	C	consensus_score=46.3	frequency=1	major_base=C	major_cov=1/17	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/17	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/17
RA	2224	.	NC_007793	2113266	0	G	A	consensus_score=91.4	frequency=1	major_base=A	major_cov=3/30	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=3/30	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=3/30
RA	2225	.	NC_007793	2113269	0	A	T	consensus_score=90.3	frequency=1	major_base=T	major_cov=3/30	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=3/30	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=3/30
RA	2226	.	NC_007793	2113320	0	T	G	bias_e_value=2917440	bias_p_value=0.999991	consensus_score=50.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.99568	major_base=G	major_cov=2/19	major_frequency=9.545e-01	minor_base=T	minor_cov=0/1	new_cov=2/19	polymorphism_frequency=9.545e-01	polymorphism_score=-5.8	prediction=consensus	ref_cov=0/1	total_cov=2/20
RA	2227	.	NC_007793	2113329	0	G	A	bias_e_value=2917470	bias_p_value=1	consensus_score=35.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=2/15	major_frequency=8.947e-01	minor_base=G	minor_cov=0/2	new_cov=2/15	polymorphism_frequency=8.947e-01	polymorphism_score=-5.5	prediction=consensus	ref_cov=0/2	total_cov=2/17
RA	2228	.	NC_007793	2113334	0	T	G	consensus_score=38.3	frequency=1	major_base=G	major_cov=2/14	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/14	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/14
RA	2229	.	NC_007793	2113341	0	T	C	consensus_score=35.2	frequency=1	major_base=C	major_cov=2/13	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/13	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/13
RA	2230	.	NC_007793	2113415	0	C	A	bias_e_value=2917470	bias_p_value=1	consensus_score=13.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=0/10	major_frequency=9.091e-01	minor_base=G	minor_cov=0/1	new_cov=0/10	polymorphism_frequency=9.091e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/11
RA	2231	.	NC_007793	2113512	0	C	T	consensus_score=24.7	frequency=1	major_base=T	major_cov=2/12	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/12	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/12
RA	2232	.	NC_007793	2113514	0	G	A	consensus_score=26.4	frequency=1	major_base=A	major_cov=2/12	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/12	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/12
RA	2233	.	NC_007793	2113519	0	C	A	bias_e_value=1172740	bias_p_value=0.401972	consensus_score=1.7	fisher_strand_p_value=0.192308	frequency=5.385e-01	ks_quality_p_value=0.693295	major_base=A	major_cov=0/7	major_frequency=5.385e-01	minor_base=C	minor_cov=2/4	new_cov=0/7	polymorphism_frequency=5.385e-01	polymorphism_score=12.4	prediction=polymorphism	ref_cov=2/4	total_cov=2/11
RA	2234	.	NC_007793	2113526	0	A	G	consensus_score=24.5	frequency=1	major_base=G	major_cov=2/12	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/12	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/12
RA	2235	.	NC_007793	2119897	0	C	A	consensus_score=23.5	frequency=1	major_base=A	major_cov=10/21	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=10/21	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=10/21
RA	2236	.	NC_007793	2119904	0	T	C	consensus_score=24.8	frequency=1	major_base=C	major_cov=10/22	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=10/22	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=10/22
RA	2237	.	NC_007793	2119909	0	C	A	bias_e_value=2284090	bias_p_value=0.7829	consensus_score=15.5	fisher_strand_p_value=0.647926	frequency=2.188e-01	ks_quality_p_value=0.645649	major_base=C	major_cov=7/18	major_frequency=7.812e-01	minor_base=A	minor_cov=3/4	new_cov=3/4	polymorphism_frequency=2.188e-01	polymorphism_score=11.4	prediction=polymorphism	ref_cov=7/18	total_cov=10/22
RA	2238	.	NC_007793	2119912	0	T	A	bias_e_value=2696140	bias_p_value=0.924136	consensus_score=15.3	fisher_strand_p_value=0.647926	frequency=2.188e-01	ks_quality_p_value=0.982652	major_base=T	major_cov=7/18	major_frequency=7.812e-01	minor_base=A	minor_cov=3/4	new_cov=3/4	polymorphism_frequency=2.188e-01	polymorphism_score=11.1	prediction=polymorphism	ref_cov=7/18	total_cov=10/22
RA	2239	.	NC_007793	2119924	0	A	C	bias_e_value=2448690	bias_p_value=0.839322	consensus_score=14.9	fisher_strand_p_value=0.647926	frequency=7.812e-01	ks_quality_p_value=0.755784	major_base=C	major_cov=7/18	major_frequency=7.812e-01	minor_base=T	minor_cov=3/4	new_cov=7/18	polymorphism_frequency=7.812e-01	polymorphism_score=8.7	prediction=polymorphism	ref_cov=0/0	total_cov=10/22
RA	2240	.	NC_007793	2119926	0	T	C	consensus_score=25.0	frequency=1	major_base=C	major_cov=10/22	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=10/22	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=10/22
RA	2241	.	NC_007793	2119944	0	C	T	bias_e_value=1013510	bias_p_value=0.347393	consensus_score=21.8	fisher_strand_p_value=0.3125	frequency=1	ks_quality_p_value=0.3442	major_base=T	major_cov=9/22	major_frequency=9.688e-01	minor_base=C	minor_cov=1/0	new_cov=9/22	polymorphism_frequency=9.688e-01	polymorphism_score=-5.0	prediction=consensus	ref_cov=1/0	total_cov=10/22
RA	2242	.	NC_007793	2119946	0	C	G	consensus_score=24.7	frequency=1	major_base=G	major_cov=10/22	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=10/22	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=10/22
RA	2243	.	NC_007793	2119947	0	T	A	consensus_score=24.7	frequency=1	major_base=A	major_cov=10/22	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=10/22	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=10/22
RA	2244	.	NC_007793	2119951	0	T	A	consensus_score=24.4	frequency=1	major_base=A	major_cov=10/22	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=10/22	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=10/22
RA	2245	.	NC_007793	2119954	0	C	T	consensus_score=24.6	frequency=1	major_base=T	major_cov=10/22	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=10/22	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=10/22
RA	2246	.	NC_007793	2119957	0	A	T	consensus_score=25.1	frequency=1	major_base=T	major_cov=10/22	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=10/22	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=10/22
RA	2247	.	NC_007793	2119960	0	A	G	bias_e_value=885210	bias_p_value=0.303417	consensus_score=21.7	fisher_strand_p_value=0.3125	frequency=1	ks_quality_p_value=0.283631	major_base=G	major_cov=9/22	major_frequency=9.688e-01	minor_base=A	minor_cov=1/0	new_cov=9/22	polymorphism_frequency=9.688e-01	polymorphism_score=-5.0	prediction=consensus	ref_cov=1/0	total_cov=10/22
RA	2248	.	NC_007793	2119966	0	A	T	consensus_score=20.7	frequency=1	major_base=T	major_cov=10/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=10/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=10/20
RA	2249	.	NC_007793	2120665	0	A	C	consensus_score=10.2	frequency=1	major_base=C	major_cov=5/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=5/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=5/1
RA	2250	.	NC_007793	2120681	0	T	A	consensus_score=13.4	frequency=1	major_base=A	major_cov=6/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=6/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=6/1
RA	2251	.	NC_007793	2120682	0	G	A	consensus_score=13.8	frequency=1	major_base=A	major_cov=6/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=6/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=6/1
RA	2252	.	NC_007793	2120686	0	C	T	consensus_score=14.5	frequency=1	major_base=T	major_cov=6/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=6/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=6/1
RA	2253	.	NC_007793	2120777	0	C	T	consensus_score=106.2	frequency=1	major_base=T	major_cov=2/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/38
RA	2254	.	NC_007793	2120785	0	T	A	consensus_score=112.8	frequency=1	major_base=A	major_cov=2/39	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/39	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/39
RA	2255	.	NC_007793	2121001	0	G	A	consensus_score=32.0	frequency=1	major_base=A	major_cov=1/12	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/12	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/12
RA	2256	.	NC_007793	2121729	0	C	T	consensus_score=26.5	frequency=1	major_base=T	major_cov=1/10	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/10	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/10
RA	2257	.	NC_007793	2121898	0	G	A	consensus_score=17.6	frequency=1	major_base=A	major_cov=1/7	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/7	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/7
RA	2258	.	NC_007793	2125383	0	G	A	consensus_score=136.5	frequency=1	major_base=A	major_cov=51/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=51/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=51/0
RA	2259	.	NC_007793	2125405	0	A	G	consensus_score=124.3	frequency=1	major_base=G	major_cov=46/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=46/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=46/0
RA	2260	.	NC_007793	2125476	0	G	A	consensus_score=77.0	frequency=1	major_base=A	major_cov=24/4	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=24/4	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=24/4
RA	2261	.	NC_007793	2125484	0	G	A	consensus_score=69.9	frequency=1	major_base=A	major_cov=24/4	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=24/4	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=24/4
RA	2262	.	NC_007793	2125487	0	A	G	consensus_score=75.2	frequency=1	major_base=G	major_cov=24/4	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=24/4	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=24/4
RA	2263	.	NC_007793	2125492	0	C	T	consensus_score=80.2	frequency=1	major_base=T	major_cov=25/4	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=25/4	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=25/4
RA	2264	.	NC_007793	2125650	0	T	C	consensus_score=52.1	frequency=1	major_base=C	major_cov=23/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=23/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=23/0
RA	2265	.	NC_007793	2126660	0	T	C	consensus_score=31.1	frequency=1	major_base=C	major_cov=10/4	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=10/4	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=10/4
RA	2266	.	NC_007793	2126944	0	T	C	consensus_score=21.6	frequency=1	major_base=C	major_cov=6/4	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=6/4	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=6/4
RA	2267	.	NC_007793	2127028	0	G	A	consensus_score=82.3	frequency=1	major_base=A	major_cov=31/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=31/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=31/1
RA	2268	.	NC_007793	2127043	0	T	C	consensus_score=81.1	frequency=1	major_base=C	major_cov=29/4	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/4	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/4
RA	2269	.	NC_007793	2127173	0	C	T	consensus_score=61.5	frequency=1	major_base=T	major_cov=19/5	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=19/5	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=19/5
RA	2270	.	NC_007793	2127228	0	T	C	consensus_score=31.5	frequency=1	major_base=C	major_cov=11/3	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=11/3	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=11/3
RA	2271	.	NC_007793	2127409	0	T	G	consensus_score=60.3	frequency=1	major_base=G	major_cov=16/8	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=16/8	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=16/8
RA	2272	.	NC_007793	2127455	0	T	C	consensus_score=29.2	frequency=1	major_base=C	major_cov=11/2	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=11/2	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=11/2
RA	2273	.	NC_007793	2127837	0	G	A	consensus_score=36.3	frequency=1	major_base=A	major_cov=11/4	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=11/4	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=11/4
RA	2274	.	NC_007793	2131773	0	A	G	consensus_score=155.0	frequency=1	major_base=G	major_cov=45/12	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=45/12	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=45/12
RA	2275	.	NC_007793	2131797	0	G	A	bias_e_value=7897.43	bias_p_value=0.00270694	consensus_score=3.6	fisher_strand_p_value=0.00106137	frequency=4.333e-01	ks_quality_p_value=0.279568	major_base=G	major_cov=7/10	major_frequency=5.667e-01	minor_base=A	minor_cov=13/0	new_cov=13/0	polymorphism_frequency=4.333e-01	polymorphism_score=22.5	prediction=polymorphism	ref_cov=7/10	total_cov=20/10
RA	2276	.	NC_007793	2133286	0	T	C	consensus_score=502.0	frequency=1	major_base=C	major_cov=5/172	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=5/172	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=5/172
RA	2277	.	NC_007793	2135915	0	T	C	bias_e_value=2917470	bias_p_value=1	consensus_score=61.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=23/2	major_frequency=9.615e-01	minor_base=G	minor_cov=1/0	new_cov=23/2	polymorphism_frequency=9.615e-01	polymorphism_score=-5.2	prediction=consensus	ref_cov=0/0	total_cov=24/2
RA	2278	.	NC_007793	2138166	0	G	A	consensus_score=50.6	frequency=1	major_base=A	major_cov=2/17	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/17	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/17
RA	2279	.	NC_007793	2142339	0	C	A	bias_e_value=2903520	bias_p_value=0.995219	consensus_score=240.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.903824	major_base=A	major_cov=84/0	major_frequency=9.882e-01	minor_base=G	minor_cov=1/0	new_cov=84/0	polymorphism_frequency=9.882e-01	polymorphism_score=-5.7	prediction=consensus	ref_cov=0/0	total_cov=86/0
RA	2280	.	NC_007793	2143497	0	A	G	consensus_score=20.4	frequency=1	major_base=G	major_cov=2/9	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/9	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/9
RA	2281	.	NC_007793	2143583	0	C	T	bias_e_value=2917470	bias_p_value=1	consensus_score=20.0	fisher_strand_p_value=1	frequency=6.842e-01	ks_quality_p_value=1	major_base=T	major_cov=3/10	major_frequency=6.842e-01	minor_base=C	minor_cov=1/5	new_cov=3/10	polymorphism_frequency=6.842e-01	polymorphism_score=3.4	prediction=polymorphism	ref_cov=1/5	total_cov=4/15
RA	2282	.	NC_007793	2143599	0	T	G	bias_e_value=2917470	bias_p_value=1	consensus_score=42.2	fisher_strand_p_value=1	frequency=2.692e-01	ks_quality_p_value=1	major_base=T	major_cov=3/16	major_frequency=7.308e-01	minor_base=G	minor_cov=1/6	new_cov=1/6	polymorphism_frequency=2.692e-01	polymorphism_score=10.5	prediction=polymorphism	ref_cov=3/16	total_cov=4/22
RA	2283	.	NC_007793	2144819	1	.	A	bias_e_value=2477970	bias_p_value=0.849357	consensus_score=154.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.504039	major_base=A	major_cov=55/2	major_frequency=9.661e-01	minor_base=.	minor_cov=2/0	new_cov=55/2	polymorphism_frequency=9.661e-01	polymorphism_score=-1.2	prediction=consensus	ref_cov=2/0	total_cov=57/2
RA	2284	.	NC_007793	2146812	0	T	A	consensus_score=22.0	frequency=1	major_base=A	major_cov=4/6	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=4/6	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=4/6
RA	2285	.	NC_007793	2148597	0	T	A	consensus_score=1150.3	frequency=1	major_base=A	major_cov=401/10	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=401/10	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=401/10
RA	2286	.	NC_007793	2152543	0	A	G	consensus_score=27.5	frequency=1	major_base=G	major_cov=1/12	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/12	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/12
RA	2287	.	NC_007793	2152544	0	A	T	bias_e_value=2899480	bias_p_value=0.993834	consensus_score=27.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.891023	major_base=T	major_cov=1/11	major_frequency=9.231e-01	minor_base=A	minor_cov=0/1	new_cov=1/11	polymorphism_frequency=9.231e-01	polymorphism_score=-3.6	prediction=consensus	ref_cov=0/1	total_cov=1/12
RA	2288	.	NC_007793	2156615	0	T	C	consensus_score=12.4	frequency=1	major_base=C	major_cov=2/5	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/5	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/5
RA	2289	.	NC_007793	2158122	0	T	G	consensus_score=27.9	frequency=1	major_base=G	major_cov=11/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=11/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=11/1
RA	2290	.	NC_007793	2159705	0	G	C	bias_e_value=466455	bias_p_value=0.159884	consensus_score=113.0	fisher_strand_p_value=1	frequency=2.105e-01	ks_quality_p_value=0.0372735	major_base=G	major_cov=45/0	major_frequency=7.895e-01	minor_base=C	minor_cov=12/0	new_cov=12/0	polymorphism_frequency=2.105e-01	polymorphism_score=25.3	prediction=polymorphism	ref_cov=45/0	total_cov=57/0
RA	2291	.	NC_007793	2162757	0	A	G	bias_e_value=2676280	bias_p_value=0.91733	consensus_score=222.3	fisher_strand_p_value=1	frequency=2.778e-01	ks_quality_p_value=0.621988	major_base=A	major_cov=8/109	major_frequency=7.222e-01	minor_base=G	minor_cov=3/42	new_cov=3/42	polymorphism_frequency=2.778e-01	polymorphism_score=76.4	prediction=polymorphism	ref_cov=8/109	total_cov=11/167
RA	2292	.	NC_007793	2180799	1	.	C	bias_e_value=396.524	bias_p_value=0.000135914	consensus_score=8.0	fisher_strand_p_value=3.68568e-05	frequency=6.842e-01	ks_quality_p_value=0.296836	major_base=C	major_cov=13/0	major_frequency=6.842e-01	minor_base=.	minor_cov=0/6	new_cov=13/0	polymorphism_frequency=6.842e-01	polymorphism_score=17.1	prediction=polymorphism	ref_cov=0/6	total_cov=14/6
RA	2293	.	NC_007793	2180808	0	T	C	bias_e_value=102.9	bias_p_value=3.52701e-05	consensus_score=7.6	fisher_strand_p_value=3.12725e-06	frequency=6.364e-01	ks_quality_p_value=0.812376	major_base=C	major_cov=14/0	major_frequency=6.364e-01	minor_base=T	minor_cov=0/8	new_cov=14/0	polymorphism_frequency=6.364e-01	polymorphism_score=11.6	prediction=polymorphism	ref_cov=0/8	total_cov=14/8
RA	2294	.	NC_007793	2180813	0	C	T	bias_e_value=0.492294	bias_p_value=1.6874e-07	consensus_score=24.4	fisher_strand_p_value=1.28935e-08	frequency=4.828e-01	ks_quality_p_value=0.668781	major_base=C	major_cov=0/15	major_frequency=5.172e-01	minor_base=T	minor_cov=14/0	new_cov=14/0	polymorphism_frequency=4.828e-01	polymorphism_score=27.5	prediction=polymorphism	ref_cov=0/15	total_cov=14/15
RA	2295	.	NC_007793	2180815	0	C	T	bias_e_value=0.41616	bias_p_value=1.42644e-07	consensus_score=23.5	fisher_strand_p_value=1.28935e-08	frequency=4.828e-01	ks_quality_p_value=0.560285	major_base=C	major_cov=0/15	major_frequency=5.172e-01	minor_base=T	minor_cov=14/0	new_cov=14/0	polymorphism_frequency=4.828e-01	polymorphism_score=27.1	prediction=polymorphism	ref_cov=0/15	total_cov=14/15
RA	2296	.	NC_007793	2180816	0	T	G	bias_e_value=0.574561	bias_p_value=1.96938e-07	consensus_score=26.0	fisher_strand_p_value=1.28935e-08	frequency=4.828e-01	ks_quality_p_value=0.787093	major_base=T	major_cov=0/15	major_frequency=5.172e-01	minor_base=G	minor_cov=14/0	new_cov=14/0	polymorphism_frequency=4.828e-01	polymorphism_score=31.4	prediction=polymorphism	ref_cov=0/15	total_cov=14/15
RA	2297	.	NC_007793	2180837	0	A	C	bias_e_value=0.0417872	bias_p_value=1.43231e-08	consensus_score=59.5	fisher_strand_p_value=6.46359e-10	frequency=3.750e-01	ks_quality_p_value=1	major_base=A	major_cov=0/25	major_frequency=6.250e-01	minor_base=C	minor_cov=14/1	new_cov=14/1	polymorphism_frequency=3.750e-01	polymorphism_score=35.9	prediction=polymorphism	ref_cov=0/25	total_cov=14/26
RA	2298	.	NC_007793	2180838	0	T	A	bias_e_value=0.0357518	bias_p_value=1.22544e-08	consensus_score=55.8	fisher_strand_p_value=6.46359e-10	frequency=3.750e-01	ks_quality_p_value=0.849308	major_base=T	major_cov=0/25	major_frequency=6.250e-01	minor_base=A	minor_cov=14/1	new_cov=14/1	polymorphism_frequency=3.750e-01	polymorphism_score=31.0	prediction=polymorphism	ref_cov=0/25	total_cov=14/26
RA	2299	.	NC_007793	2180840	0	T	C	bias_e_value=0.0357518	bias_p_value=1.22544e-08	consensus_score=47.7	fisher_strand_p_value=6.46359e-10	frequency=3.750e-01	ks_quality_p_value=0.849308	major_base=T	major_cov=0/25	major_frequency=6.250e-01	minor_base=C	minor_cov=14/1	new_cov=14/1	polymorphism_frequency=3.750e-01	polymorphism_score=24.9	prediction=polymorphism	ref_cov=0/25	total_cov=14/26
RA	2300	.	NC_007793	2186230	0	C	T	bias_e_value=794834	bias_p_value=0.272439	consensus_score=226.3	fisher_strand_p_value=0.109181	frequency=2.804e-01	ks_quality_p_value=0.698177	major_base=C	major_cov=8/146	major_frequency=7.196e-01	minor_base=T	minor_cov=0/60	new_cov=0/60	polymorphism_frequency=2.804e-01	polymorphism_score=118.7	prediction=polymorphism	ref_cov=8/146	total_cov=8/206
RA	2301	.	NC_007793	2187805	0	A	.	bias_e_value=2884480	bias_p_value=0.988694	consensus_score=253.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.853447	major_base=.	major_cov=0/67	major_frequency=9.853e-01	minor_base=T	minor_cov=0/1	new_cov=0/67	polymorphism_frequency=9.853e-01	polymorphism_score=-2.9	prediction=consensus	ref_cov=0/1	total_cov=0/69
RA	2302	.	NC_007793	2188603	0	G	A	consensus_score=218.5	frequency=1	major_base=A	major_cov=9/67	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=9/67	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=9/67
RA	2303	.	NC_007793	2196542	0	C	T	consensus_score=11.2	frequency=1	major_base=T	major_cov=2/4	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/4	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/4
RA	2304	.	NC_007793	2210233	1	.	G	bias_e_value=271071	bias_p_value=0.0929132	consensus_score=39.4	fisher_strand_p_value=0.107771	frequency=5.116e-01	ks_quality_p_value=0.173054	major_base=G	major_cov=22/0	major_frequency=5.116e-01	minor_base=.	minor_cov=18/3	new_cov=22/0	polymorphism_frequency=5.116e-01	polymorphism_score=81.0	prediction=polymorphism	ref_cov=18/3	total_cov=40/3
RA	2305	.	NC_007793	2210233	2	.	G	bias_e_value=271071	bias_p_value=0.0929132	consensus_score=37.7	fisher_strand_p_value=0.107771	frequency=5.116e-01	ks_quality_p_value=0.173054	major_base=G	major_cov=22/0	major_frequency=5.116e-01	minor_base=.	minor_cov=18/3	new_cov=22/0	polymorphism_frequency=5.116e-01	polymorphism_score=81.0	prediction=polymorphism	ref_cov=18/3	total_cov=40/3
RA	2306	.	NC_007793	2226043	0	C	T	bias_e_value=86.08	bias_p_value=2.9505e-05	consensus_score=161.6	fisher_strand_p_value=0.00170488	frequency=4.225e-01	ks_quality_p_value=0.00122954	major_base=C	major_cov=12/234	major_frequency=5.775e-01	minor_base=T	minor_cov=0/180	new_cov=0/180	polymorphism_frequency=4.225e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=12/234	total_cov=12/414
RA	2307	.	NC_007793	2228730	1	.	C	bias_e_value=99458.3	bias_p_value=0.0340906	consensus_score=1978.4	fisher_strand_p_value=0.00640876	frequency=2.472e-01	ks_quality_p_value=0.857423	major_base=.	major_cov=20/647	major_frequency=7.528e-01	minor_base=C	minor_cov=0/219	new_cov=0/219	polymorphism_frequency=2.472e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=20/647	total_cov=20/866
RA	2308	.	NC_007793	2230311	0	C	T	bias_e_value=2650700	bias_p_value=0.908561	consensus_score=1389.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.60407	major_base=T	major_cov=6/486	major_frequency=9.919e-01	minor_base=C	minor_cov=0/4	new_cov=6/486	polymorphism_frequency=9.919e-01	polymorphism_score=-5.0	prediction=consensus	ref_cov=0/4	total_cov=6/490
RA	2309	.	NC_007793	2230768	0	C	T	bias_e_value=2917470	bias_p_value=1	consensus_score=1276.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.99975	major_base=T	major_cov=92/355	major_frequency=9.978e-01	minor_base=A	minor_cov=0/1	new_cov=92/355	polymorphism_frequency=9.978e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=92/356
RA	2310	.	NC_007793	2232890	0	T	.	bias_e_value=2914140	bias_p_value=0.99886	consensus_score=531.0	fisher_strand_p_value=1	frequency=2.172e-01	ks_quality_p_value=0.952639	major_base=T	major_cov=2/171	major_frequency=7.828e-01	minor_base=.	minor_cov=0/48	new_cov=0/48	polymorphism_frequency=2.172e-01	polymorphism_score=136.3	prediction=polymorphism	ref_cov=2/171	total_cov=2/219
RA	2311	.	NC_007793	2234368	0	C	T	bias_e_value=2917470	bias_p_value=1	consensus_score=171.2	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=7/56	major_frequency=9.844e-01	minor_base=G	minor_cov=0/1	new_cov=7/56	polymorphism_frequency=9.844e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=7/57
RA	2312	.	NC_007793	2239982	0	T	C	bias_e_value=2916970	bias_p_value=0.999828	consensus_score=376.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.981489	major_base=C	major_cov=0/134	major_frequency=9.926e-01	minor_base=T	minor_cov=0/1	new_cov=0/134	polymorphism_frequency=9.926e-01	polymorphism_score=-5.3	prediction=consensus	ref_cov=0/1	total_cov=0/135
RA	2313	.	NC_007793	2240223	0	T	C	bias_e_value=2917210	bias_p_value=0.999912	consensus_score=127.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.98677	major_base=C	major_cov=2/49	major_frequency=9.623e-01	minor_base=T	minor_cov=0/2	new_cov=2/49	polymorphism_frequency=9.623e-01	polymorphism_score=-2.9	prediction=consensus	ref_cov=0/2	total_cov=2/51
RA	2314	.	NC_007793	2241394	0	C	T	bias_e_value=689107	bias_p_value=0.2362	consensus_score=37.9	fisher_strand_p_value=0.0855015	frequency=3.492e-01	ks_quality_p_value=0.732725	major_base=C	major_cov=7/34	major_frequency=6.508e-01	minor_base=T	minor_cov=0/22	new_cov=0/22	polymorphism_frequency=3.492e-01	polymorphism_score=42.8	prediction=polymorphism	ref_cov=7/34	total_cov=7/56
RA	2315	.	NC_007793	2247455	0	T	G	bias_e_value=2859140	bias_p_value=0.980008	consensus_score=85.3	fisher_strand_p_value=1	frequency=2.549e-01	ks_quality_p_value=0.80682	major_base=T	major_cov=36/2	major_frequency=7.451e-01	minor_base=G	minor_cov=13/0	new_cov=13/0	polymorphism_frequency=2.549e-01	polymorphism_score=22.5	prediction=polymorphism	ref_cov=36/2	total_cov=49/2
RA	2316	.	NC_007793	2249009	0	A	T	bias_e_value=2914460	bias_p_value=0.998967	consensus_score=15.8	fisher_strand_p_value=1	frequency=7.692e-01	ks_quality_p_value=0.954895	major_base=T	major_cov=0/10	major_frequency=7.692e-01	minor_base=A	minor_cov=0/3	new_cov=0/10	polymorphism_frequency=7.692e-01	polymorphism_score=2.1	prediction=polymorphism	ref_cov=0/3	total_cov=0/13
RA	2317	.	NC_007793	2256605	0	G	A	consensus_score=289.5	frequency=1	major_base=A	major_cov=5/97	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=5/97	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=5/97
RA	2318	.	NC_007793	2262064	0	C	T	consensus_score=17.3	frequency=1	major_base=T	major_cov=5/3	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=5/3	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=5/3
RA	2319	.	NC_007793	2264201	0	G	A	bias_e_value=2917440	bias_p_value=0.999989	consensus_score=887.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.995372	major_base=A	major_cov=314/8	major_frequency=9.938e-01	minor_base=T	minor_cov=2/0	new_cov=314/8	polymorphism_frequency=9.938e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=317/8
RA	2320	.	NC_007793	2265262	0	G	T	bias_e_value=1928380	bias_p_value=0.660977	consensus_score=125.5	fisher_strand_p_value=0.661017	frequency=3.235e-01	ks_quality_p_value=0.453577	major_base=G	major_cov=5/64	major_frequency=6.765e-01	minor_base=T	minor_cov=1/32	new_cov=1/32	polymorphism_frequency=3.235e-01	polymorphism_score=80.0	prediction=polymorphism	ref_cov=5/64	total_cov=6/96
RA	2321	.	NC_007793	2265270	0	C	T	bias_e_value=634845	bias_p_value=0.217601	consensus_score=102.7	fisher_strand_p_value=0.255068	frequency=3.767e-01	ks_quality_p_value=0.219803	major_base=C	major_cov=6/85	major_frequency=6.233e-01	minor_base=T	minor_cov=1/54	new_cov=1/54	polymorphism_frequency=3.767e-01	polymorphism_score=106.0	prediction=polymorphism	ref_cov=6/85	total_cov=7/139
RA	2322	.	NC_007793	2265273	0	T	G	bias_e_value=826536	bias_p_value=0.283306	consensus_score=109.7	fisher_strand_p_value=0.260897	frequency=3.691e-01	ks_quality_p_value=0.30853	major_base=T	major_cov=6/88	major_frequency=6.309e-01	minor_base=G	minor_cov=1/54	new_cov=1/54	polymorphism_frequency=3.691e-01	polymorphism_score=147.9	prediction=polymorphism	ref_cov=6/88	total_cov=7/142
RA	2323	.	NC_007793	2265281	0	C	T	bias_e_value=1776890	bias_p_value=0.609053	consensus_score=170.1	fisher_strand_p_value=0.260541	frequency=3.744e-01	ks_quality_p_value=0.994549	major_base=C	major_cov=6/131	major_frequency=6.256e-01	minor_base=T	minor_cov=1/81	new_cov=1/81	polymorphism_frequency=3.744e-01	polymorphism_score=153.9	prediction=polymorphism	ref_cov=6/131	total_cov=7/213
RA	2324	.	NC_007793	2265282	0	A	C	bias_e_value=1759080	bias_p_value=0.602948	consensus_score=192.8	fisher_strand_p_value=0.261805	frequency=3.727e-01	ks_quality_p_value=0.972589	major_base=A	major_cov=6/132	major_frequency=6.273e-01	minor_base=C	minor_cov=1/81	new_cov=1/81	polymorphism_frequency=3.727e-01	polymorphism_score=214.4	prediction=polymorphism	ref_cov=6/132	total_cov=7/213
RA	2325	.	NC_007793	2265285	0	G	A	bias_e_value=1760190	bias_p_value=0.603327	consensus_score=119.0	fisher_strand_p_value=0.260541	frequency=3.744e-01	ks_quality_p_value=0.978373	major_base=G	major_cov=6/131	major_frequency=6.256e-01	minor_base=A	minor_cov=1/81	new_cov=1/81	polymorphism_frequency=3.744e-01	polymorphism_score=172.7	prediction=polymorphism	ref_cov=6/131	total_cov=7/212
RA	2326	.	NC_007793	2265303	0	A	C	bias_e_value=2833440	bias_p_value=0.971199	consensus_score=153.1	fisher_strand_p_value=0.783525	frequency=4.218e-01	ks_quality_p_value=0.982485	major_base=A	major_cov=9/161	major_frequency=5.782e-01	minor_base=C	minor_cov=5/119	new_cov=5/119	polymorphism_frequency=4.218e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=9/161	total_cov=14/280
RA	2327	.	NC_007793	2265312	0	A	G	bias_e_value=1902600	bias_p_value=0.652142	consensus_score=106.4	fisher_strand_p_value=0.429596	frequency=4.669e-01	ks_quality_p_value=0.681013	major_base=A	major_cov=9/184	major_frequency=5.331e-01	minor_base=G	minor_cov=5/164	new_cov=5/164	polymorphism_frequency=4.669e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=9/184	total_cov=14/348
RA	2328	.	NC_007793	2265317	0	C	A	bias_e_value=10963.6	bias_p_value=0.00375791	consensus_score=65.6	fisher_strand_p_value=0.428967	frequency=4.656e-01	ks_quality_p_value=0.0010008	major_base=C	major_cov=10/184	major_frequency=5.344e-01	minor_base=A	minor_cov=5/164	new_cov=5/164	polymorphism_frequency=4.656e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=10/184	total_cov=15/348
RA	2329	.	NC_007793	2265334	0	T	C	bias_e_value=2617020	bias_p_value=0.897017	consensus_score=8.3	fisher_strand_p_value=0.766473	frequency=5.106e-01	ks_quality_p_value=0.759296	major_base=C	major_cov=5/164	major_frequency=5.106e-01	minor_base=T	minor_cov=6/156	new_cov=5/164	polymorphism_frequency=5.106e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=6/156	total_cov=11/324
RA	2330	.	NC_007793	2265339	0	G	A	bias_e_value=1328330	bias_p_value=0.455302	consensus_score=82.1	fisher_strand_p_value=0.762506	frequency=5.232e-01	ks_quality_p_value=0.211332	major_base=A	major_cov=5/164	major_frequency=5.232e-01	minor_base=G	minor_cov=6/148	new_cov=5/164	polymorphism_frequency=5.232e-01	polymorphism_score=311.9	prediction=polymorphism	ref_cov=6/148	total_cov=11/312
RA	2331	.	NC_007793	2265344	0	A	C	bias_e_value=691600	bias_p_value=0.237055	consensus_score=-4.9	fisher_strand_p_value=0.765543	frequency=5.127e-01	ks_quality_p_value=0.0822396	major_base=C	major_cov=5/157	major_frequency=5.127e-01	minor_base=A	minor_cov=6/148	new_cov=5/157	polymorphism_frequency=5.127e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=6/148	total_cov=11/305
RA	2332	.	NC_007793	2265354	0	C	A	bias_e_value=2371920	bias_p_value=0.813007	consensus_score=-2.5	fisher_strand_p_value=1	frequency=4.984e-01	ks_quality_p_value=0.454637	major_base=C	major_cov=6/147	major_frequency=5.016e-01	minor_base=A	minor_cov=5/147	new_cov=5/147	polymorphism_frequency=4.984e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=6/147	total_cov=11/294
RA	2333	.	NC_007793	2265361	0	C	A	bias_e_value=839631	bias_p_value=0.287794	consensus_score=29.1	fisher_strand_p_value=1	frequency=4.618e-01	ks_quality_p_value=0.0822838	major_base=C	major_cov=4/130	major_frequency=5.382e-01	minor_base=A	minor_cov=4/111	new_cov=4/111	polymorphism_frequency=4.618e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=4/130	total_cov=8/243
RA	2334	.	NC_007793	2265364	0	C	.	bias_e_value=20.348	bias_p_value=6.97455e-06	consensus_score=252.5	fisher_strand_p_value=0.719219	frequency=4.104e-01	ks_quality_p_value=6.20756e-07	major_base=C	major_cov=4/121	major_frequency=5.896e-01	minor_base=.	minor_cov=4/83	new_cov=4/83	polymorphism_frequency=4.104e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=4/121	total_cov=8/204
RA	2335	.	NC_007793	2265365	0	A	.	bias_e_value=2.53087	bias_p_value=8.67487e-07	consensus_score=351.9	fisher_strand_p_value=1	frequency=4.236e-01	ks_quality_p_value=4.86286e-08	major_base=A	major_cov=5/112	major_frequency=5.764e-01	minor_base=.	minor_cov=4/82	new_cov=4/82	polymorphism_frequency=4.236e-01	polymorphism_score=279.9	prediction=polymorphism	ref_cov=5/112	total_cov=9/202
RA	2336	.	NC_007793	2265369	0	C	T	bias_e_value=37328.1	bias_p_value=0.0127947	consensus_score=68.4	fisher_strand_p_value=1	frequency=4.223e-01	ks_quality_p_value=0.00173983	major_base=C	major_cov=5/114	major_frequency=5.777e-01	minor_base=T	minor_cov=4/83	new_cov=4/83	polymorphism_frequency=4.223e-01	polymorphism_score=194.9	prediction=polymorphism	ref_cov=5/114	total_cov=9/197
RA	2337	.	NC_007793	2265373	0	A	T	bias_e_value=15246.5	bias_p_value=0.00522593	consensus_score=65.8	fisher_strand_p_value=1	frequency=4.531e-01	ks_quality_p_value=0.000623621	major_base=A	major_cov=5/100	major_frequency=5.469e-01	minor_base=T	minor_cov=4/83	new_cov=4/83	polymorphism_frequency=4.531e-01	polymorphism_score=211.2	prediction=polymorphism	ref_cov=5/100	total_cov=9/183
RA	2338	.	NC_007793	2265375	0	T	C	bias_e_value=42780.3	bias_p_value=0.0146635	consensus_score=63.0	fisher_strand_p_value=1	frequency=4.531e-01	ks_quality_p_value=0.00203776	major_base=T	major_cov=5/100	major_frequency=5.469e-01	minor_base=C	minor_cov=4/83	new_cov=4/83	polymorphism_frequency=4.531e-01	polymorphism_score=180.8	prediction=polymorphism	ref_cov=5/100	total_cov=9/183
RA	2339	.	NC_007793	2265382	0	T	C	bias_e_value=2390490	bias_p_value=0.819371	consensus_score=39.2	fisher_strand_p_value=0.506776	frequency=5.613e-01	ks_quality_p_value=0.91323	major_base=C	major_cov=4/83	major_frequency=5.613e-01	minor_base=T	minor_cov=5/63	new_cov=4/83	polymorphism_frequency=5.613e-01	polymorphism_score=147.9	prediction=polymorphism	ref_cov=5/63	total_cov=9/147
RA	2340	.	NC_007793	2265388	0	A	G	bias_e_value=2202670	bias_p_value=0.754995	consensus_score=30.0	fisher_strand_p_value=0.492669	frequency=5.750e-01	ks_quality_p_value=0.786809	major_base=G	major_cov=4/65	major_frequency=5.750e-01	minor_base=A	minor_cov=5/46	new_cov=4/65	polymorphism_frequency=5.750e-01	polymorphism_score=104.9	prediction=polymorphism	ref_cov=5/46	total_cov=9/111
RA	2341	.	NC_007793	2265390	0	C	A	bias_e_value=2152420	bias_p_value=0.73777	consensus_score=68.7	fisher_strand_p_value=0.492669	frequency=5.750e-01	ks_quality_p_value=0.7508	major_base=A	major_cov=4/65	major_frequency=5.750e-01	minor_base=C	minor_cov=5/46	new_cov=4/65	polymorphism_frequency=5.750e-01	polymorphism_score=127.0	prediction=polymorphism	ref_cov=5/46	total_cov=9/111
RA	2342	.	NC_007793	2272018	0	T	G	bias_e_value=4.4006e-22	bias_p_value=1.50836e-28	consensus_score=166.9	fisher_strand_p_value=2.43616e-30	frequency=3.237e-01	ks_quality_p_value=0.893443	major_base=T	major_cov=6/88	major_frequency=6.763e-01	minor_base=G	minor_cov=45/0	new_cov=45/0	polymorphism_frequency=3.237e-01	polymorphism_score=101.9	prediction=polymorphism	ref_cov=6/88	total_cov=51/89
RA	2343	.	NC_007793	2272021	0	T	C	bias_e_value=1.83653e-22	bias_p_value=6.29493e-29	consensus_score=141.7	fisher_strand_p_value=2.43616e-30	frequency=3.237e-01	ks_quality_p_value=0.368156	major_base=T	major_cov=6/88	major_frequency=6.763e-01	minor_base=C	minor_cov=45/0	new_cov=45/0	polymorphism_frequency=3.237e-01	polymorphism_score=75.6	prediction=polymorphism	ref_cov=6/88	total_cov=51/88
RA	2344	.	NC_007793	2272026	0	T	G	bias_e_value=1.39121e-19	bias_p_value=4.76854e-26	consensus_score=142.6	fisher_strand_p_value=7.51477e-28	frequency=3.492e-01	ks_quality_p_value=1	major_base=T	major_cov=4/78	major_frequency=6.508e-01	minor_base=G	minor_cov=43/1	new_cov=43/1	polymorphism_frequency=3.492e-01	polymorphism_score=91.9	prediction=polymorphism	ref_cov=4/78	total_cov=47/79
RA	2345	.	NC_007793	2272029	0	T	C	bias_e_value=5.55705e-22	bias_p_value=1.90475e-28	consensus_score=115.0	fisher_strand_p_value=2.44148e-26	frequency=3.600e-01	ks_quality_p_value=0.000112964	major_base=T	major_cov=4/76	major_frequency=6.400e-01	minor_base=C	minor_cov=43/2	new_cov=43/2	polymorphism_frequency=3.600e-01	polymorphism_score=80.4	prediction=polymorphism	ref_cov=4/76	total_cov=47/78
RA	2346	.	NC_007793	2272032	0	G	A	bias_e_value=8.03842e-28	bias_p_value=2.75527e-34	consensus_score=84.6	fisher_strand_p_value=1.03576e-26	frequency=3.554e-01	ks_quality_p_value=3.21704e-10	major_base=G	major_cov=4/74	major_frequency=6.446e-01	minor_base=A	minor_cov=42/1	new_cov=42/1	polymorphism_frequency=3.554e-01	polymorphism_score=80.7	prediction=polymorphism	ref_cov=4/74	total_cov=46/75
RA	2347	.	NC_007793	2275549	0	T	G	consensus_score=39.1	frequency=1	major_base=G	major_cov=14/2	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=14/2	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=14/2
RA	2348	.	NC_007793	2276564	0	A	G	consensus_score=10.0	frequency=1	major_base=G	major_cov=6/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=6/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=6/0
RA	2349	.	NC_007793	2279071	0	G	T	bias_e_value=2917470	bias_p_value=1	consensus_score=55.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=2/19	major_frequency=9.545e-01	minor_base=G	minor_cov=0/1	new_cov=2/19	polymorphism_frequency=9.545e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=2/20
RA	2350	.	NC_007793	2291981	0	T	A	bias_e_value=2701760	bias_p_value=0.926063	consensus_score=328.4	fisher_strand_p_value=1	frequency=2.511e-01	ks_quality_p_value=0.640985	major_base=T	major_cov=2/165	major_frequency=7.489e-01	minor_base=A	minor_cov=1/55	new_cov=1/55	polymorphism_frequency=2.511e-01	polymorphism_score=125.9	prediction=polymorphism	ref_cov=2/165	total_cov=3/236
RA	2351	.	NC_007793	2292072	0	T	A	bias_e_value=2917450	bias_p_value=0.999992	consensus_score=266.4	fisher_strand_p_value=1	frequency=2.014e-01	ks_quality_p_value=0.996006	major_base=T	major_cov=3/112	major_frequency=7.986e-01	minor_base=A	minor_cov=0/29	new_cov=0/29	polymorphism_frequency=2.014e-01	polymorphism_score=59.6	prediction=polymorphism	ref_cov=3/112	total_cov=4/147
RA	2352	.	NC_007793	2292257	0	T	A	bias_e_value=2915700	bias_p_value=0.999393	consensus_score=42.0	fisher_strand_p_value=1	frequency=2.750e-01	ks_quality_p_value=0.965348	major_base=T	major_cov=2/27	major_frequency=7.250e-01	minor_base=A	minor_cov=1/10	new_cov=1/10	polymorphism_frequency=2.750e-01	polymorphism_score=22.3	prediction=polymorphism	ref_cov=2/27	total_cov=3/37
RA	2353	.	NC_007793	2300166	0	A	C	consensus_score=100.7	frequency=1	major_base=C	major_cov=0/37	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/37	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/37
RA	2354	.	NC_007793	2300219	0	G	A	consensus_score=58.4	frequency=1	major_base=A	major_cov=2/21	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/21	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/21
RA	2355	.	NC_007793	2309270	0	C	T	consensus_score=144.2	frequency=1	major_base=T	major_cov=5/50	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=5/50	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=5/50
RA	2356	.	NC_007793	2309657	0	G	.	bias_e_value=5.0522e-18	bias_p_value=1.73171e-24	consensus_score=210.0	fisher_strand_p_value=5.6748e-26	frequency=2.810e-01	ks_quality_p_value=0.510262	major_base=G	major_cov=4/83	major_frequency=7.190e-01	minor_base=.	minor_cov=34/0	new_cov=34/0	polymorphism_frequency=2.810e-01	polymorphism_score=122.4	prediction=polymorphism	ref_cov=4/83	total_cov=38/83
RA	2357	.	NC_007793	2309664	0	G	T	bias_e_value=2.10863e-16	bias_p_value=7.22759e-23	consensus_score=178.3	fisher_strand_p_value=1.36939e-24	frequency=2.869e-01	ks_quality_p_value=0.942372	major_base=G	major_cov=4/83	major_frequency=7.131e-01	minor_base=T	minor_cov=34/1	new_cov=34/1	polymorphism_frequency=2.869e-01	polymorphism_score=89.1	prediction=polymorphism	ref_cov=4/83	total_cov=38/84
RA	2358	.	NC_007793	2309664	1	.	T	bias_e_value=2.13669e-18	bias_p_value=7.32377e-25	consensus_score=177.9	fisher_strand_p_value=1.95349e-26	frequency=2.750e-01	ks_quality_p_value=0.617853	major_base=.	major_cov=3/84	major_frequency=7.250e-01	minor_base=T	minor_cov=33/0	new_cov=33/0	polymorphism_frequency=2.750e-01	polymorphism_score=132.1	prediction=polymorphism	ref_cov=3/84	total_cov=36/84
RA	2359	.	NC_007793	2313223	0	T	C	bias_e_value=2917280	bias_p_value=0.999934	consensus_score=1814.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.988492	major_base=C	major_cov=14/622	major_frequency=9.953e-01	minor_base=T	minor_cov=0/3	new_cov=14/622	polymorphism_frequency=9.953e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/3	total_cov=14/627
RA	2360	.	NC_007793	2314395	0	T	C	bias_e_value=2335660	bias_p_value=0.800577	consensus_score=38.5	fisher_strand_p_value=1	frequency=3.250e-01	ks_quality_p_value=0.439204	major_base=T	major_cov=2/25	major_frequency=6.750e-01	minor_base=C	minor_cov=0/13	new_cov=0/13	polymorphism_frequency=3.250e-01	polymorphism_score=17.8	prediction=polymorphism	ref_cov=2/25	total_cov=2/38
RA	2361	.	NC_007793	2364856	1	.	T	bias_e_value=2374390	bias_p_value=0.813852	consensus_score=2049.6	fisher_strand_p_value=0.45571	frequency=2.232e-01	ks_quality_p_value=1	major_base=.	major_cov=17/766	major_frequency=7.768e-01	minor_base=T	minor_cov=7/218	new_cov=7/218	polymorphism_frequency=2.232e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=17/766	total_cov=24/985
RA	2362	.	NC_007793	2370859	0	A	C	bias_e_value=1081470	bias_p_value=0.370687	consensus_score=2293.0	fisher_strand_p_value=0.119559	frequency=2.635e-01	ks_quality_p_value=0.988964	major_base=A	major_cov=8/1001	major_frequency=7.365e-01	minor_base=C	minor_cov=0/361	new_cov=0/361	polymorphism_frequency=2.635e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=8/1001	total_cov=8/1368
RA	2363	.	NC_007793	2370860	0	A	G	bias_e_value=465720	bias_p_value=0.159632	consensus_score=1971.4	fisher_strand_p_value=0.11741	frequency=2.695e-01	ks_quality_p_value=0.316812	major_base=A	major_cov=8/992	major_frequency=7.305e-01	minor_base=G	minor_cov=0/369	new_cov=0/369	polymorphism_frequency=2.695e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=8/992	total_cov=8/1378
RA	2364	.	NC_007793	2370864	0	C	T	bias_e_value=255858	bias_p_value=0.0876987	consensus_score=1954.3	fisher_strand_p_value=0.120194	frequency=2.620e-01	ks_quality_p_value=0.144369	major_base=C	major_cov=8/1034	major_frequency=7.380e-01	minor_base=T	minor_cov=0/370	new_cov=0/370	polymorphism_frequency=2.620e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=8/1034	total_cov=8/1404
RA	2365	.	NC_007793	2370973	0	T	C	bias_e_value=2018480	bias_p_value=0.691859	consensus_score=6162.9	fisher_strand_p_value=0.327842	frequency=1	ks_quality_p_value=0.995633	major_base=C	major_cov=270/1913	major_frequency=9.986e-01	minor_base=T	minor_cov=1/2	new_cov=270/1913	polymorphism_frequency=9.986e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/2	total_cov=271/1915
RA	2366	.	NC_007793	2381180	0	A	C	consensus_score=186.9	frequency=1	major_base=C	major_cov=2/70	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/70	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/70
RA	2367	.	NC_007793	2381781	0	G	A	consensus_score=54.1	frequency=1	major_base=A	major_cov=1/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/19
RA	2368	.	NC_007793	2384995	0	A	T	consensus_score=210.3	frequency=1	major_base=T	major_cov=2/76	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/76	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/76
RA	2369	.	NC_007793	2388589	0	C	T	consensus_score=24.3	frequency=1	major_base=T	major_cov=0/11	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/11	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/11
RA	2370	.	NC_007793	2388654	0	C	T	consensus_score=69.5	frequency=1	major_base=T	major_cov=1/26	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/26	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/26
RA	2371	.	NC_007793	2396927	0	C	T	consensus_score=46.7	frequency=1	major_base=T	major_cov=6/13	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=6/13	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=6/13
RA	2372	.	NC_007793	2411452	0	T	C	bias_e_value=2715700	bias_p_value=0.93084	consensus_score=25.9	fisher_strand_p_value=1	frequency=7.727e-01	ks_quality_p_value=0.651937	major_base=C	major_cov=0/17	major_frequency=7.727e-01	minor_base=T	minor_cov=0/5	new_cov=0/17	polymorphism_frequency=7.727e-01	polymorphism_score=4.4	prediction=polymorphism	ref_cov=0/5	total_cov=0/22
RA	2373	.	NC_007793	2411453	0	T	G	bias_e_value=2558110	bias_p_value=0.876824	consensus_score=39.6	fisher_strand_p_value=1	frequency=7.826e-01	ks_quality_p_value=0.546695	major_base=G	major_cov=0/18	major_frequency=7.826e-01	minor_base=T	minor_cov=0/5	new_cov=0/18	polymorphism_frequency=7.826e-01	polymorphism_score=7.1	prediction=polymorphism	ref_cov=0/5	total_cov=0/23
RA	2374	.	NC_007793	2411457	0	A	T	bias_e_value=2569250	bias_p_value=0.880644	consensus_score=32.5	fisher_strand_p_value=1	frequency=7.308e-01	ks_quality_p_value=0.553082	major_base=T	major_cov=0/19	major_frequency=7.308e-01	minor_base=A	minor_cov=0/7	new_cov=0/19	polymorphism_frequency=7.308e-01	polymorphism_score=11.4	prediction=polymorphism	ref_cov=0/7	total_cov=0/26
RA	2375	.	NC_007793	2414448	0	A	C	consensus_score=51.7	frequency=1	major_base=C	major_cov=4/16	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=4/16	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=4/16
RA	2376	.	NC_007793	2414460	0	G	C	consensus_score=53.3	frequency=1	major_base=C	major_cov=4/17	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=4/17	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=4/17
RA	2377	.	NC_007793	2414505	0	A	G	consensus_score=43.6	frequency=1	major_base=G	major_cov=2/16	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/16	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/16
RA	2378	.	NC_007793	2428932	0	T	A	bias_e_value=2542870	bias_p_value=0.871602	consensus_score=43.3	fisher_strand_p_value=0.538158	frequency=3.250e-01	ks_quality_p_value=1	major_base=T	major_cov=3/24	major_frequency=6.750e-01	minor_base=A	minor_cov=0/13	new_cov=0/13	polymorphism_frequency=3.250e-01	polymorphism_score=10.4	prediction=polymorphism	ref_cov=3/24	total_cov=3/37
RA	2379	.	NC_007793	2432141	0	C	T	bias_e_value=202.801	bias_p_value=6.95128e-05	consensus_score=31.2	fisher_strand_p_value=5.32477e-06	frequency=6.327e-01	ks_quality_p_value=0.992712	major_base=T	major_cov=0/31	major_frequency=6.327e-01	minor_base=C	minor_cov=10/8	new_cov=0/31	polymorphism_frequency=6.327e-01	polymorphism_score=28.8	prediction=polymorphism	ref_cov=10/8	total_cov=10/39
RA	2380	.	NC_007793	2433026	0	T	C	bias_e_value=79973.6	bias_p_value=0.027412	consensus_score=-6.0	fisher_strand_p_value=0.00699301	frequency=5.000e-01	ks_quality_p_value=0.606531	major_base=T	major_cov=2/6	major_frequency=5.000e-01	minor_base=C	minor_cov=8/0	new_cov=8/0	polymorphism_frequency=5.000e-01	polymorphism_score=12.2	prediction=polymorphism	ref_cov=2/6	total_cov=10/6
RA	2381	.	NC_007793	2438783	0	G	A	consensus_score=20.5	frequency=1	major_base=A	major_cov=2/7	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/7	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/7
RA	2382	.	NC_007793	2443999	0	C	A	consensus_score=40.0	frequency=1	major_base=A	major_cov=0/16	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/16	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/16
RA	2383	.	NC_007793	2444611	0	T	C	consensus_score=36.0	frequency=1	major_base=C	major_cov=0/16	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/16	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/16
RA	2384	.	NC_007793	2445965	0	G	A	consensus_score=13.8	frequency=1	major_base=A	major_cov=0/7	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/7	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/7
RA	2385	.	NC_007793	2469973	0	T	C	consensus_score=111.6	frequency=1	major_base=C	major_cov=6/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=6/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=6/38
RA	2386	.	NC_007793	2472542	0	C	T	bias_e_value=2917450	bias_p_value=0.999992	consensus_score=121.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.995968	major_base=T	major_cov=44/0	major_frequency=9.778e-01	minor_base=C	minor_cov=1/0	new_cov=44/0	polymorphism_frequency=9.778e-01	polymorphism_score=-5.7	prediction=consensus	ref_cov=1/0	total_cov=45/0
RA	2387	.	NC_007793	2486803	0	A	G	consensus_score=182.6	frequency=1	major_base=G	major_cov=8/62	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=8/62	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=8/62
RA	2388	.	NC_007793	2487887	0	T	C	bias_e_value=411402	bias_p_value=0.141013	consensus_score=94.8	fisher_strand_p_value=0.0977369	frequency=2.576e-01	ks_quality_p_value=0.324052	major_base=T	major_cov=40/9	major_frequency=7.424e-01	minor_base=C	minor_cov=17/0	new_cov=17/0	polymorphism_frequency=2.576e-01	polymorphism_score=24.5	prediction=polymorphism	ref_cov=40/9	total_cov=66/9
RA	2389	.	NC_007793	2490079	0	T	C	consensus_score=52.3	frequency=1	major_base=C	major_cov=0/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/20
RA	2390	.	NC_007793	2491612	0	A	T	bias_e_value=5092.15	bias_p_value=0.0017454	consensus_score=17.4	fisher_strand_p_value=0.000181548	frequency=4.074e-01	ks_quality_p_value=1	major_base=A	major_cov=4/12	major_frequency=5.926e-01	minor_base=T	minor_cov=11/0	new_cov=11/0	polymorphism_frequency=4.074e-01	polymorphism_score=14.8	prediction=polymorphism	ref_cov=4/12	total_cov=15/13
RA	2391	.	NC_007793	2499398	0	C	T	consensus_score=61.3	frequency=1	major_base=T	major_cov=4/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=4/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=4/20
RA	2392	.	NC_007793	2500631	0	A	G	bias_e_value=2917470	bias_p_value=1	consensus_score=35162.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.99997	major_base=G	major_cov=284/12729	major_frequency=9.988e-01	minor_base=A	minor_cov=0/15	new_cov=284/12729	polymorphism_frequency=9.988e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/15	total_cov=284/12750
RA	2393	.	NC_007793	2501150	0	T	G	consensus_score=34.9	frequency=1	major_base=G	major_cov=10/5	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=10/5	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=10/5
RA	2394	.	NC_007793	2503744	1	.	C	bias_e_value=293182	bias_p_value=0.100492	consensus_score=10.4	fisher_strand_p_value=0.0646619	frequency=4.396e-01	ks_quality_p_value=0.318234	major_base=.	major_cov=46/5	major_frequency=5.604e-01	minor_base=C	minor_cov=40/0	new_cov=40/0	polymorphism_frequency=4.396e-01	polymorphism_score=184.8	prediction=polymorphism	ref_cov=46/5	total_cov=86/5
RA	2395	.	NC_007793	2503835	0	T	C	consensus_score=73.0	frequency=1	major_base=C	major_cov=28/2	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=28/2	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/2
RA	2396	.	NC_007793	2507313	0	G	A	consensus_score=667.1	frequency=1	major_base=A	major_cov=215/4	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=215/4	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=215/4
RA	2397	.	NC_007793	2507880	0	C	G	consensus_score=383.8	frequency=1	major_base=G	major_cov=147/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=147/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=147/1
RA	2398	.	NC_007793	2525762	0	C	T	consensus_score=64.4	frequency=1	major_base=T	major_cov=4/21	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=4/21	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=4/21
RA	2399	.	NC_007793	2528525	0	A	C	bias_e_value=0.197918	bias_p_value=6.7839e-08	consensus_score=376.3	fisher_strand_p_value=9.65105e-08	frequency=4.384e-01	ks_quality_p_value=0.0342421	major_base=A	major_cov=28/355	major_frequency=5.616e-01	minor_base=C	minor_cov=0/299	new_cov=0/299	polymorphism_frequency=4.384e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=28/355	total_cov=28/668
RA	2400	.	NC_007793	2528527	0	C	G	bias_e_value=0.000114782	bias_p_value=3.93431e-11	consensus_score=361.9	fisher_strand_p_value=1.09976e-07	frequency=4.321e-01	ks_quality_p_value=1.26404e-05	major_base=C	major_cov=28/365	major_frequency=5.679e-01	minor_base=G	minor_cov=0/299	new_cov=0/299	polymorphism_frequency=4.321e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=28/365	total_cov=28/666
RA	2401	.	NC_007793	2530526	0	A	T	bias_e_value=2917470	bias_p_value=1	consensus_score=359.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=2/129	major_frequency=9.924e-01	minor_base=A	minor_cov=0/1	new_cov=2/129	polymorphism_frequency=9.924e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=2/130
RA	2402	.	NC_007793	2531610	1	.	T	bias_e_value=2917470	bias_p_value=1	consensus_score=75.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=0/28	major_frequency=8.235e-01	minor_base=.	minor_cov=0/6	new_cov=0/28	polymorphism_frequency=8.235e-01	polymorphism_score=12.3	prediction=consensus	ref_cov=0/6	total_cov=0/34
RA	2403	.	NC_007793	2531610	2	.	C	bias_e_value=2917470	bias_p_value=1	consensus_score=69.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=0/28	major_frequency=8.235e-01	minor_base=.	minor_cov=0/6	new_cov=0/28	polymorphism_frequency=8.235e-01	polymorphism_score=16.0	prediction=consensus	ref_cov=0/6	total_cov=0/34
RA	2404	.	NC_007793	2531610	3	.	A	bias_e_value=2917470	bias_p_value=1	consensus_score=78.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=0/28	major_frequency=8.235e-01	minor_base=.	minor_cov=0/6	new_cov=0/28	polymorphism_frequency=8.235e-01	polymorphism_score=11.8	prediction=consensus	ref_cov=0/6	total_cov=0/34
RA	2405	.	NC_007793	2532141	0	C	T	bias_e_value=2917470	bias_p_value=1	consensus_score=22.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=9/1	major_frequency=9.091e-01	minor_base=C	minor_cov=1/0	new_cov=9/1	polymorphism_frequency=9.091e-01	polymorphism_score=-5.9	prediction=consensus	ref_cov=1/0	total_cov=10/1
RA	2406	.	NC_007793	2534504	0	G	A	bias_e_value=2917470	bias_p_value=1	consensus_score=106.8	fisher_strand_p_value=1	frequency=2.857e-01	ks_quality_p_value=1	major_base=G	major_cov=0/80	major_frequency=7.143e-01	minor_base=A	minor_cov=0/32	new_cov=0/32	polymorphism_frequency=2.857e-01	polymorphism_score=28.0	prediction=polymorphism	ref_cov=0/80	total_cov=0/115
RA	2407	.	NC_007793	2546294	0	A	G	consensus_score=24.2	frequency=1	major_base=G	major_cov=1/10	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/10	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/10
RA	2408	.	NC_007793	2576289	0	C	T	consensus_score=58.4	frequency=1	major_base=T	major_cov=0/23	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/23	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/23
RA	2409	.	NC_007793	2576724	0	T	G	consensus_score=23.7	frequency=1	major_base=G	major_cov=1/10	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/10	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/10
RA	2410	.	NC_007793	2577966	0	A	T	bias_e_value=524339	bias_p_value=0.179724	consensus_score=13.8	fisher_strand_p_value=0.132357	frequency=3.929e-01	ks_quality_p_value=0.3283	major_base=A	major_cov=4/13	major_frequency=6.071e-01	minor_base=T	minor_cov=0/11	new_cov=0/11	polymorphism_frequency=3.929e-01	polymorphism_score=22.9	prediction=polymorphism	ref_cov=4/13	total_cov=4/24
RA	2411	.	NC_007793	2586131	0	C	T	consensus_score=48.4	frequency=1	major_base=T	major_cov=1/18	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/18	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/18
RA	2412	.	NC_007793	2588640	0	G	C	bias_e_value=362241	bias_p_value=0.124163	consensus_score=26.5	fisher_strand_p_value=0.284091	frequency=3.636e-01	ks_quality_p_value=0.0946904	major_base=G	major_cov=3/18	major_frequency=6.364e-01	minor_base=C	minor_cov=0/12	new_cov=0/12	polymorphism_frequency=3.636e-01	polymorphism_score=27.6	prediction=polymorphism	ref_cov=3/18	total_cov=3/30
RA	2413	.	NC_007793	2588641	0	C	G	bias_e_value=1766570	bias_p_value=0.605514	consensus_score=23.7	fisher_strand_p_value=0.274194	frequency=3.750e-01	ks_quality_p_value=0.935507	major_base=C	major_cov=3/17	major_frequency=6.250e-01	minor_base=G	minor_cov=0/12	new_cov=0/12	polymorphism_frequency=3.750e-01	polymorphism_score=29.5	prediction=polymorphism	ref_cov=3/17	total_cov=3/29
RA	2414	.	NC_007793	2590666	0	A	G	consensus_score=103.4	frequency=1	major_base=G	major_cov=31/8	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=31/8	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=31/8
RA	2415	.	NC_007793	2592235	0	C	T	bias_e_value=2917410	bias_p_value=0.999981	consensus_score=795.2	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.99391	major_base=T	major_cov=29/260	major_frequency=9.966e-01	minor_base=G	minor_cov=0/1	new_cov=29/260	polymorphism_frequency=9.966e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/261
RA	2416	.	NC_007793	2597230	0	A	C	bias_e_value=364.892	bias_p_value=0.000125072	consensus_score=6810.1	fisher_strand_p_value=9.99499e-06	frequency=2.215e-01	ks_quality_p_value=1	major_base=A	major_cov=48/2289	major_frequency=7.785e-01	minor_base=C	minor_cov=0/665	new_cov=0/665	polymorphism_frequency=2.215e-01	polymorphism_score=253.3	prediction=polymorphism	ref_cov=48/2289	total_cov=48/2995
RA	2417	.	NC_007793	2597253	0	G	T	bias_e_value=422677	bias_p_value=0.144878	consensus_score=3828.9	fisher_strand_p_value=0.0327969	frequency=2.164e-01	ks_quality_p_value=1	major_base=G	major_cov=17/1826	major_frequency=7.836e-01	minor_base=T	minor_cov=0/509	new_cov=0/509	polymorphism_frequency=2.164e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=17/1826	total_cov=17/2350
RA	2418	.	NC_007793	2597258	0	C	T	bias_e_value=100595	bias_p_value=0.0344803	consensus_score=2371.8	fisher_strand_p_value=0.0057417	frequency=2.718e-01	ks_quality_p_value=0.970095	major_base=C	major_cov=17/1647	major_frequency=7.282e-01	minor_base=T	minor_cov=0/621	new_cov=0/621	polymorphism_frequency=2.718e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=17/1647	total_cov=17/2287
RA	2419	.	NC_007793	2597266	0	T	C	bias_e_value=69872.1	bias_p_value=0.0239496	consensus_score=2149.0	fisher_strand_p_value=0.00361653	frequency=3.430e-01	ks_quality_p_value=1	major_base=T	major_cov=14/1526	major_frequency=6.570e-01	minor_base=C	minor_cov=0/804	new_cov=0/804	polymorphism_frequency=3.430e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=14/1526	total_cov=14/2387
RA	2420	.	NC_007793	2597271	0	T	A	bias_e_value=5568.01	bias_p_value=0.00190851	consensus_score=1396.8	fisher_strand_p_value=0.000200595	frequency=4.081e-01	ks_quality_p_value=1	major_base=T	major_cov=17/1410	major_frequency=5.919e-01	minor_base=A	minor_cov=0/984	new_cov=0/984	polymorphism_frequency=4.081e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=17/1410	total_cov=17/2477
RA	2421	.	NC_007793	2597274	0	A	C	bias_e_value=1.86226e-269	bias_p_value=6.38314e-276	consensus_score=902.1	fisher_strand_p_value=2.52618e-05	frequency=5.047e-01	ks_quality_p_value=3.9412e-274	major_base=C	major_cov=0/1173	major_frequency=5.047e-01	minor_base=A	minor_cov=15/1136	new_cov=0/1173	polymorphism_frequency=5.047e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=15/1136	total_cov=15/2455
RA	2422	.	NC_007793	2601699	0	T	C	consensus_score=24.8	frequency=1	major_base=C	major_cov=1/10	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/10	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/10
RA	2423	.	NC_007793	2602512	0	A	G	bias_e_value=2654300	bias_p_value=0.909796	consensus_score=-4.1	fisher_strand_p_value=1	frequency=5.000e-01	ks_quality_p_value=0.606531	major_base=A	major_cov=1/7	major_frequency=5.000e-01	minor_base=G	minor_cov=0/8	new_cov=0/8	polymorphism_frequency=5.000e-01	polymorphism_score=12.2	prediction=polymorphism	ref_cov=1/7	total_cov=1/15
RA	2424	.	NC_007793	2602514	0	A	T	bias_e_value=2012720	bias_p_value=0.689886	consensus_score=-6.3	fisher_strand_p_value=1	frequency=5.000e-01	ks_quality_p_value=0.324652	major_base=A	major_cov=1/7	major_frequency=5.000e-01	minor_base=T	minor_cov=0/8	new_cov=0/8	polymorphism_frequency=5.000e-01	polymorphism_score=14.2	prediction=polymorphism	ref_cov=1/7	total_cov=1/15
RA	2425	.	NC_007793	2604197	0	T	A	bias_e_value=1124990	bias_p_value=0.385605	consensus_score=9.5	fisher_strand_p_value=0.493506	frequency=4.091e-01	ks_quality_p_value=0.253947	major_base=T	major_cov=11/2	major_frequency=5.909e-01	minor_base=A	minor_cov=9/0	new_cov=9/0	polymorphism_frequency=4.091e-01	polymorphism_score=16.3	prediction=polymorphism	ref_cov=11/2	total_cov=22/2
RA	2426	.	NC_007793	2604198	0	A	G	bias_e_value=443886	bias_p_value=0.152148	consensus_score=7.6	fisher_strand_p_value=0.504762	frequency=3.810e-01	ks_quality_p_value=0.0692294	major_base=A	major_cov=11/2	major_frequency=6.190e-01	minor_base=G	minor_cov=8/0	new_cov=8/0	polymorphism_frequency=3.810e-01	polymorphism_score=12.5	prediction=polymorphism	ref_cov=11/2	total_cov=19/2
RA	2427	.	NC_007793	2604198	1	.	G	bias_e_value=2917470	bias_p_value=1	consensus_score=34.6	fisher_strand_p_value=1	frequency=2.500e-01	ks_quality_p_value=1	major_base=.	major_cov=13/2	major_frequency=7.500e-01	minor_base=G	minor_cov=5/0	new_cov=5/0	polymorphism_frequency=2.500e-01	polymorphism_score=16.3	prediction=polymorphism	ref_cov=13/2	total_cov=19/2
RA	2428	.	NC_007793	2608681	0	T	C	consensus_score=251.0	frequency=1	major_base=C	major_cov=41/59	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=41/59	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=41/59
RA	2429	.	NC_007793	2610839	0	T	C	consensus_score=28.3	frequency=1	major_base=C	major_cov=3/10	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=3/10	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=3/10
RA	2430	.	NC_007793	2613249	1	.	T	bias_e_value=2905660	bias_p_value=0.995951	consensus_score=86.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.911373	major_base=T	major_cov=5/27	major_frequency=9.697e-01	minor_base=C	minor_cov=0/1	new_cov=5/27	polymorphism_frequency=9.697e-01	polymorphism_score=-4.7	prediction=consensus	ref_cov=0/0	total_cov=5/28
RA	2431	.	NC_007793	2614129	0	G	A	bias_e_value=2696900	bias_p_value=0.924396	consensus_score=80.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.637262	major_base=A	major_cov=0/29	major_frequency=9.667e-01	minor_base=T	minor_cov=0/1	new_cov=0/29	polymorphism_frequency=9.667e-01	polymorphism_score=-4.3	prediction=consensus	ref_cov=0/0	total_cov=0/30
RA	2432	.	NC_007793	2616847	0	T	C	bias_e_value=2370820	bias_p_value=0.81263	consensus_score=186.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.454158	major_base=C	major_cov=4/75	major_frequency=9.186e-01	minor_base=T	minor_cov=0/7	new_cov=4/75	polymorphism_frequency=9.186e-01	polymorphism_score=4.0	prediction=consensus	ref_cov=0/7	total_cov=4/82
RA	2433	.	NC_007793	2623498	0	T	A	bias_e_value=51355.4	bias_p_value=0.0176027	consensus_score=188.7	fisher_strand_p_value=0.0384088	frequency=7.679e-01	ks_quality_p_value=0.0656288	major_base=A	major_cov=1/85	major_frequency=7.679e-01	minor_base=T	minor_cov=3/23	new_cov=1/85	polymorphism_frequency=7.679e-01	polymorphism_score=50.2	prediction=polymorphism	ref_cov=3/23	total_cov=4/109
RA	2434	.	NC_007793	2623504	0	G	T	bias_e_value=250501	bias_p_value=0.0858624	consensus_score=445.0	fisher_strand_p_value=0.0174659	frequency=1	ks_quality_p_value=0.96764	major_base=T	major_cov=1/169	major_frequency=8.252e-01	minor_base=G	minor_cov=3/33	new_cov=1/169	polymorphism_frequency=8.252e-01	polymorphism_score=76.2	prediction=consensus	ref_cov=3/33	total_cov=4/204
RA	2435	.	NC_007793	2623510	0	A	G	bias_e_value=188835	bias_p_value=0.0647255	consensus_score=425.1	fisher_strand_p_value=0.0122992	frequency=1	ks_quality_p_value=0.969267	major_base=G	major_cov=2/186	major_frequency=8.826e-01	minor_base=A	minor_cov=3/22	new_cov=2/186	polymorphism_frequency=8.826e-01	polymorphism_score=36.4	prediction=consensus	ref_cov=3/22	total_cov=5/208
RA	2436	.	NC_007793	2623516	0	G	A	bias_e_value=143556	bias_p_value=0.0492056	consensus_score=538.1	fisher_strand_p_value=0.00898067	frequency=1	ks_quality_p_value=0.95069	major_base=A	major_cov=2/202	major_frequency=8.947e-01	minor_base=G	minor_cov=3/21	new_cov=2/202	polymorphism_frequency=8.947e-01	polymorphism_score=27.2	prediction=consensus	ref_cov=3/21	total_cov=5/223
RA	2437	.	NC_007793	2623519	0	T	G	bias_e_value=145156	bias_p_value=0.0497541	consensus_score=530.3	fisher_strand_p_value=0.00898067	frequency=1	ks_quality_p_value=0.96353	major_base=G	major_cov=2/202	major_frequency=8.947e-01	minor_base=T	minor_cov=3/21	new_cov=2/202	polymorphism_frequency=8.947e-01	polymorphism_score=44.1	prediction=consensus	ref_cov=3/21	total_cov=5/223
RA	2438	.	NC_007793	2623539	0	T	C	bias_e_value=386041	bias_p_value=0.132321	consensus_score=1026.5	fisher_strand_p_value=0.0299449	frequency=1	ks_quality_p_value=0.974557	major_base=C	major_cov=7/386	major_frequency=9.269e-01	minor_base=T	minor_cov=3/28	new_cov=7/386	polymorphism_frequency=9.269e-01	polymorphism_score=42.3	prediction=consensus	ref_cov=3/28	total_cov=10/414
RA	2439	.	NC_007793	2623543	0	C	T	bias_e_value=392841	bias_p_value=0.134651	consensus_score=1004.0	fisher_strand_p_value=0.0301322	frequency=1	ks_quality_p_value=0.990455	major_base=T	major_cov=7/385	major_frequency=9.267e-01	minor_base=C	minor_cov=3/28	new_cov=7/385	polymorphism_frequency=9.267e-01	polymorphism_score=30.7	prediction=consensus	ref_cov=3/28	total_cov=10/414
RA	2440	.	NC_007793	2623546	0	T	A	bias_e_value=125.788	bias_p_value=4.31153e-05	consensus_score=1132.3	fisher_strand_p_value=0.0383491	frequency=1	ks_quality_p_value=8.22652e-05	major_base=A	major_cov=7/383	major_frequency=9.198e-01	minor_base=T	minor_cov=3/31	new_cov=7/383	polymorphism_frequency=9.198e-01	polymorphism_score=50.2	prediction=consensus	ref_cov=3/31	total_cov=10/415
RA	2441	.	NC_007793	2623547	0	T	C	bias_e_value=107.836	bias_p_value=3.69621e-05	consensus_score=935.0	fisher_strand_p_value=0.0324176	frequency=1	ks_quality_p_value=8.24272e-05	major_base=C	major_cov=7/386	major_frequency=9.247e-01	minor_base=T	minor_cov=3/29	new_cov=7/386	polymorphism_frequency=9.247e-01	polymorphism_score=39.2	prediction=consensus	ref_cov=3/29	total_cov=10/415
RA	2442	.	NC_007793	2623548	0	G	C	bias_e_value=215.727	bias_p_value=7.39431e-05	consensus_score=1040.9	fisher_strand_p_value=0.0349871	frequency=1	ks_quality_p_value=0.000161534	major_base=C	major_cov=7/386	major_frequency=9.225e-01	minor_base=G	minor_cov=3/30	new_cov=7/386	polymorphism_frequency=9.225e-01	polymorphism_score=60.1	prediction=consensus	ref_cov=3/30	total_cov=10/416
RA	2443	.	NC_007793	2623549	0	A	G	bias_e_value=451499	bias_p_value=0.154757	consensus_score=955.2	fisher_strand_p_value=0.0378824	frequency=1	ks_quality_p_value=0.943049	major_base=G	major_cov=7/385	major_frequency=9.202e-01	minor_base=A	minor_cov=3/31	new_cov=7/385	polymorphism_frequency=9.202e-01	polymorphism_score=44.2	prediction=consensus	ref_cov=3/31	total_cov=10/416
RA	2444	.	NC_007793	2623552	0	T	A	bias_e_value=418888	bias_p_value=0.143579	consensus_score=1167.7	fisher_strand_p_value=0.0324176	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=7/386	major_frequency=9.247e-01	minor_base=T	minor_cov=3/29	new_cov=7/386	polymorphism_frequency=9.247e-01	polymorphism_score=46.8	prediction=consensus	ref_cov=3/29	total_cov=10/415
RA	2445	.	NC_007793	2623553	0	G	A	bias_e_value=418888	bias_p_value=0.143579	consensus_score=1085.6	fisher_strand_p_value=0.0324176	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=7/386	major_frequency=9.247e-01	minor_base=G	minor_cov=3/29	new_cov=7/386	polymorphism_frequency=9.247e-01	polymorphism_score=30.3	prediction=consensus	ref_cov=3/29	total_cov=10/415
RA	2446	.	NC_007793	2623555	0	G	T	bias_e_value=312444	bias_p_value=0.107094	consensus_score=1165.6	fisher_strand_p_value=0.0235849	frequency=1	ks_quality_p_value=0.945337	major_base=T	major_cov=9/414	major_frequency=9.976e-01	minor_base=C	minor_cov=1/0	new_cov=9/414	polymorphism_frequency=9.976e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=10/415
RA	2447	.	NC_007793	2623570	0	A	G	bias_e_value=1336980	bias_p_value=0.458266	consensus_score=1039.9	fisher_strand_p_value=0.407959	frequency=1	ks_quality_p_value=0.398988	major_base=G	major_cov=7/410	major_frequency=9.371e-01	minor_base=A	minor_cov=1/27	new_cov=7/410	polymorphism_frequency=9.371e-01	polymorphism_score=31.0	prediction=consensus	ref_cov=1/27	total_cov=8/437
RA	2448	.	NC_007793	2623573	0	G	C	bias_e_value=1954280	bias_p_value=0.669854	consensus_score=1161.9	fisher_strand_p_value=0.420058	frequency=1	ks_quality_p_value=0.731488	major_base=C	major_cov=7/408	major_frequency=9.347e-01	minor_base=G	minor_cov=1/28	new_cov=7/408	polymorphism_frequency=9.347e-01	polymorphism_score=52.6	prediction=consensus	ref_cov=1/28	total_cov=8/437
RA	2449	.	NC_007793	2623574	0	A	T	bias_e_value=2167290	bias_p_value=0.742866	consensus_score=1170.8	fisher_strand_p_value=0.397121	frequency=1	ks_quality_p_value=0.944438	major_base=T	major_cov=7/410	major_frequency=9.392e-01	minor_base=A	minor_cov=1/26	new_cov=7/410	polymorphism_frequency=9.392e-01	polymorphism_score=38.5	prediction=consensus	ref_cov=1/26	total_cov=8/437
RA	2450	.	NC_007793	2623575	0	T	C	bias_e_value=894354	bias_p_value=0.306551	consensus_score=1088.3	fisher_strand_p_value=0.0899319	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=6/410	major_frequency=9.348e-01	minor_base=T	minor_cov=2/27	new_cov=6/410	polymorphism_frequency=9.348e-01	polymorphism_score=30.3	prediction=consensus	ref_cov=2/27	total_cov=8/437
RA	2451	.	NC_007793	2623591	0	C	T	bias_e_value=2227340	bias_p_value=0.763449	consensus_score=900.5	fisher_strand_p_value=0.396667	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=6/331	major_frequency=9.309e-01	minor_base=C	minor_cov=1/24	new_cov=6/331	polymorphism_frequency=9.309e-01	polymorphism_score=22.9	prediction=consensus	ref_cov=1/24	total_cov=7/356
RA	2452	.	NC_007793	2623596	0	T	C	bias_e_value=1361050	bias_p_value=0.466516	consensus_score=599.3	fisher_strand_p_value=0.317167	frequency=1	ks_quality_p_value=0.52764	major_base=C	major_cov=5/226	major_frequency=9.390e-01	minor_base=T	minor_cov=1/14	new_cov=5/226	polymorphism_frequency=9.390e-01	polymorphism_score=12.6	prediction=consensus	ref_cov=1/14	total_cov=6/240
RA	2453	.	NC_007793	2623599	0	T	C	bias_e_value=1797520	bias_p_value=0.616124	consensus_score=588.9	fisher_strand_p_value=0.300096	frequency=1	ks_quality_p_value=0.881038	major_base=C	major_cov=5/226	major_frequency=9.429e-01	minor_base=T	minor_cov=1/13	new_cov=5/226	polymorphism_frequency=9.429e-01	polymorphism_score=14.0	prediction=consensus	ref_cov=1/13	total_cov=6/240
RA	2454	.	NC_007793	2623600	0	C	T	bias_e_value=1987900	bias_p_value=0.681378	consensus_score=635.8	fisher_strand_p_value=0.317167	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=5/226	major_frequency=9.390e-01	minor_base=C	minor_cov=1/14	new_cov=5/226	polymorphism_frequency=9.390e-01	polymorphism_score=9.3	prediction=consensus	ref_cov=1/14	total_cov=6/240
RA	2455	.	NC_007793	2623603	0	G	T	bias_e_value=935704	bias_p_value=0.320725	consensus_score=676.9	fisher_strand_p_value=0.317167	frequency=1	ks_quality_p_value=0.302354	major_base=T	major_cov=5/226	major_frequency=9.390e-01	minor_base=G	minor_cov=1/14	new_cov=5/226	polymorphism_frequency=9.390e-01	polymorphism_score=23.3	prediction=consensus	ref_cov=1/14	total_cov=6/240
RA	2456	.	NC_007793	2623614	0	C	G	bias_e_value=1983280	bias_p_value=0.679794	consensus_score=70.0	fisher_strand_p_value=0.315789	frequency=6.842e-01	ks_quality_p_value=1	major_base=G	major_cov=0/39	major_frequency=6.842e-01	minor_base=C	minor_cov=1/17	new_cov=0/39	polymorphism_frequency=6.842e-01	polymorphism_score=45.3	prediction=polymorphism	ref_cov=1/17	total_cov=1/56
RA	2457	.	NC_007793	2623618	0	T	G	bias_e_value=1243120	bias_p_value=0.426094	consensus_score=79.1	fisher_strand_p_value=0.290909	frequency=7.091e-01	ks_quality_p_value=0.500391	major_base=G	major_cov=0/39	major_frequency=7.091e-01	minor_base=T	minor_cov=1/15	new_cov=0/39	polymorphism_frequency=7.091e-01	polymorphism_score=35.5	prediction=polymorphism	ref_cov=1/15	total_cov=1/54
RA	2458	.	NC_007793	2623620	0	A	T	bias_e_value=423315	bias_p_value=0.145097	consensus_score=61.7	fisher_strand_p_value=0.296296	frequency=7.037e-01	ks_quality_p_value=0.110906	major_base=T	major_cov=0/38	major_frequency=7.037e-01	minor_base=A	minor_cov=1/15	new_cov=0/38	polymorphism_frequency=7.037e-01	polymorphism_score=35.6	prediction=polymorphism	ref_cov=1/15	total_cov=1/53
RA	2459	.	NC_007793	2623626	0	T	C	bias_e_value=2288130	bias_p_value=0.784287	consensus_score=19.1	fisher_strand_p_value=1	frequency=5.952e-01	ks_quality_p_value=0.419927	major_base=C	major_cov=0/25	major_frequency=5.952e-01	minor_base=T	minor_cov=0/17	new_cov=0/25	polymorphism_frequency=5.952e-01	polymorphism_score=30.7	prediction=polymorphism	ref_cov=0/17	total_cov=0/42
RA	2460	.	NC_007793	2623627	0	A	T	bias_e_value=2802500	bias_p_value=0.960593	consensus_score=15.8	fisher_strand_p_value=1	frequency=5.854e-01	ks_quality_p_value=0.732732	major_base=T	major_cov=0/24	major_frequency=5.854e-01	minor_base=A	minor_cov=0/17	new_cov=0/24	polymorphism_frequency=5.854e-01	polymorphism_score=41.3	prediction=polymorphism	ref_cov=0/17	total_cov=0/42
RA	2461	.	NC_007793	2623633	0	A	T	bias_e_value=1337230	bias_p_value=0.458353	consensus_score=22.9	fisher_strand_p_value=1	frequency=6.098e-01	ks_quality_p_value=0.162818	major_base=T	major_cov=0/25	major_frequency=6.098e-01	minor_base=A	minor_cov=0/16	new_cov=0/25	polymorphism_frequency=6.098e-01	polymorphism_score=37.7	prediction=polymorphism	ref_cov=0/16	total_cov=0/41
RA	2462	.	NC_007793	2623642	0	G	T	bias_e_value=26474	bias_p_value=0.00907432	consensus_score=28.4	fisher_strand_p_value=1	frequency=6.250e-01	ks_quality_p_value=0.00117088	major_base=T	major_cov=0/25	major_frequency=6.250e-01	minor_base=G	minor_cov=0/15	new_cov=0/25	polymorphism_frequency=6.250e-01	polymorphism_score=38.5	prediction=polymorphism	ref_cov=0/15	total_cov=0/40
RA	2463	.	NC_007793	2623644	0	T	C	bias_e_value=463876	bias_p_value=0.158999	consensus_score=24.7	fisher_strand_p_value=1	frequency=6.410e-01	ks_quality_p_value=0.037005	major_base=C	major_cov=0/25	major_frequency=6.410e-01	minor_base=T	minor_cov=0/14	new_cov=0/25	polymorphism_frequency=6.410e-01	polymorphism_score=24.3	prediction=polymorphism	ref_cov=0/14	total_cov=0/39
RA	2464	.	NC_007793	2623804	0	T	C	bias_e_value=839760	bias_p_value=0.287839	consensus_score=60.2	fisher_strand_p_value=1	frequency=2.553e-01	ks_quality_p_value=0.0823015	major_base=T	major_cov=1/34	major_frequency=7.447e-01	minor_base=C	minor_cov=0/12	new_cov=0/12	polymorphism_frequency=2.553e-01	polymorphism_score=18.9	prediction=polymorphism	ref_cov=1/34	total_cov=1/46
RA	2465	.	NC_007793	2624155	0	A	C	bias_e_value=817.54	bias_p_value=0.000280222	consensus_score=9.0	fisher_strand_p_value=1	frequency=5.192e-01	ks_quality_p_value=2.40868e-05	major_base=C	major_cov=2/25	major_frequency=5.192e-01	minor_base=A	minor_cov=1/24	new_cov=2/25	polymorphism_frequency=5.192e-01	polymorphism_score=66.7	prediction=polymorphism	ref_cov=1/24	total_cov=3/49
RA	2466	.	NC_007793	2624263	0	A	G	consensus_score=18.8	frequency=1	major_base=G	major_cov=0/12	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/12	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/12
RA	2467	.	NC_007793	2624794	0	A	G	bias_e_value=2690720	bias_p_value=0.92228	consensus_score=29.0	fisher_strand_p_value=1	frequency=3.864e-01	ks_quality_p_value=0.632603	major_base=A	major_cov=0/27	major_frequency=6.136e-01	minor_base=G	minor_cov=0/17	new_cov=0/17	polymorphism_frequency=3.864e-01	polymorphism_score=29.0	prediction=polymorphism	ref_cov=0/27	total_cov=0/46
RA	2468	.	NC_007793	2624797	0	C	T	bias_e_value=1674820	bias_p_value=0.574068	consensus_score=19.0	fisher_strand_p_value=1	frequency=4.000e-01	ks_quality_p_value=0.234136	major_base=C	major_cov=0/27	major_frequency=6.000e-01	minor_base=T	minor_cov=0/18	new_cov=0/18	polymorphism_frequency=4.000e-01	polymorphism_score=33.1	prediction=polymorphism	ref_cov=0/27	total_cov=0/45
RA	2469	.	NC_007793	2624923	0	C	A	consensus_score=35.2	frequency=1	major_base=A	major_cov=0/15	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/15	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/15
RA	2470	.	NC_007793	2624964	1	.	T	bias_e_value=1511180	bias_p_value=0.517975	consensus_score=104.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.197578	major_base=T	major_cov=0/37	major_frequency=9.250e-01	minor_base=.	minor_cov=0/3	new_cov=0/37	polymorphism_frequency=9.250e-01	polymorphism_score=2.0	prediction=consensus	ref_cov=0/3	total_cov=0/40
RA	2471	.	NC_007793	2630054	0	C	A	consensus_score=30.5	frequency=1	major_base=A	major_cov=1/13	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/13	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/13
RA	2472	.	NC_007793	2631954	0	G	.	bias_e_value=2859330	bias_p_value=0.980072	consensus_score=46.5	fisher_strand_p_value=1	frequency=2.500e-01	ks_quality_p_value=0.807118	major_base=G	major_cov=1/20	major_frequency=7.500e-01	minor_base=.	minor_cov=0/7	new_cov=0/7	polymorphism_frequency=2.500e-01	polymorphism_score=20.4	prediction=polymorphism	ref_cov=1/20	total_cov=1/27
RA	2473	.	NC_007793	2641715	0	G	A	consensus_score=151.7	frequency=1	major_base=A	major_cov=1/55	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/55	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/55
RA	2474	.	NC_007793	2652084	0	C	T	bias_e_value=2917470	bias_p_value=1	consensus_score=48.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=16/3	major_frequency=9.500e-01	minor_base=A	minor_cov=1/0	new_cov=16/3	polymorphism_frequency=9.500e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=17/3
RA	2475	.	NC_007793	2667711	0	C	T	consensus_score=11.6	frequency=1	major_base=T	major_cov=0/6	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/6	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/6
RA	2476	.	NC_007793	2670189	0	C	T	bias_e_value=750432	bias_p_value=0.25722	consensus_score=74.6	fisher_strand_p_value=1	frequency=3.171e-01	ks_quality_p_value=0.0704036	major_base=C	major_cov=2/54	major_frequency=6.829e-01	minor_base=T	minor_cov=0/26	new_cov=0/26	polymorphism_frequency=3.171e-01	polymorphism_score=46.8	prediction=polymorphism	ref_cov=2/54	total_cov=2/80
RA	2477	.	NC_007793	2671553	0	T	A	bias_e_value=59234	bias_p_value=0.0203032	consensus_score=-0.7	fisher_strand_p_value=0.4	frequency=6.000e-01	ks_quality_p_value=0.00744658	major_base=A	major_cov=0/18	major_frequency=6.000e-01	minor_base=T	minor_cov=1/11	new_cov=0/18	polymorphism_frequency=6.000e-01	polymorphism_score=16.3	prediction=polymorphism	ref_cov=1/11	total_cov=1/29
RA	2478	.	NC_007793	2674302	0	T	C	bias_e_value=2891950	bias_p_value=0.991253	consensus_score=100.5	fisher_strand_p_value=1	frequency=2.034e-01	ks_quality_p_value=0.870682	major_base=T	major_cov=0/47	major_frequency=7.966e-01	minor_base=C	minor_cov=0/12	new_cov=0/12	polymorphism_frequency=2.034e-01	polymorphism_score=13.7	prediction=polymorphism	ref_cov=0/47	total_cov=0/59
RA	2479	.	NC_007793	2674304	0	A	T	bias_e_value=2425420	bias_p_value=0.831345	consensus_score=103.5	fisher_strand_p_value=1	frequency=2.203e-01	ks_quality_p_value=0.478694	major_base=A	major_cov=0/46	major_frequency=7.797e-01	minor_base=T	minor_cov=0/13	new_cov=0/13	polymorphism_frequency=2.203e-01	polymorphism_score=21.7	prediction=polymorphism	ref_cov=0/46	total_cov=0/59
RA	2480	.	NC_007793	2674310	0	A	C	bias_e_value=939130	bias_p_value=0.321899	consensus_score=107.7	fisher_strand_p_value=1	frequency=2.131e-01	ks_quality_p_value=0.0963979	major_base=A	major_cov=0/48	major_frequency=7.869e-01	minor_base=C	minor_cov=0/13	new_cov=0/13	polymorphism_frequency=2.131e-01	polymorphism_score=27.7	prediction=polymorphism	ref_cov=0/48	total_cov=0/61
RA	2481	.	NC_007793	2674311	0	C	T	bias_e_value=1738.03	bias_p_value=0.000595733	consensus_score=84.2	fisher_strand_p_value=1	frequency=2.131e-01	ks_quality_p_value=5.51309e-05	major_base=C	major_cov=0/48	major_frequency=7.869e-01	minor_base=T	minor_cov=0/13	new_cov=0/13	polymorphism_frequency=2.131e-01	polymorphism_score=18.1	prediction=polymorphism	ref_cov=0/48	total_cov=0/61
RA	2482	.	NC_007793	2678862	0	A	T	bias_e_value=1855.23	bias_p_value=0.000635905	consensus_score=89.6	fisher_strand_p_value=0.036948	frequency=4.377e-01	ks_quality_p_value=0.00160341	major_base=A	major_cov=161/6	major_frequency=5.623e-01	minor_base=T	minor_cov=130/0	new_cov=130/0	polymorphism_frequency=4.377e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=161/6	total_cov=292/6
RA	2483	.	NC_007793	2678863	0	G	C	bias_e_value=638.942	bias_p_value=0.000219006	consensus_score=110.0	fisher_strand_p_value=0.0345708	frequency=4.486e-01	ks_quality_p_value=0.000532208	major_base=G	major_cov=155/6	major_frequency=5.514e-01	minor_base=C	minor_cov=131/0	new_cov=131/0	polymorphism_frequency=4.486e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=155/6	total_cov=286/6
RA	2484	.	NC_007793	2678864	0	T	G	bias_e_value=174.243	bias_p_value=5.9724e-05	consensus_score=103.0	fisher_strand_p_value=0.0336507	frequency=4.536e-01	ks_quality_p_value=0.000133299	major_base=T	major_cov=153/6	major_frequency=5.464e-01	minor_base=G	minor_cov=132/0	new_cov=132/0	polymorphism_frequency=4.536e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=153/6	total_cov=286/6
RA	2485	.	NC_007793	2679460	0	G	A	bias_e_value=1434970	bias_p_value=0.491856	consensus_score=97.5	fisher_strand_p_value=0.184211	frequency=1	ks_quality_p_value=0.987279	major_base=A	major_cov=31/6	major_frequency=9.737e-01	minor_base=G	minor_cov=0/1	new_cov=31/6	polymorphism_frequency=9.737e-01	polymorphism_score=-5.6	prediction=consensus	ref_cov=0/1	total_cov=31/7
RA	2486	.	NC_007793	2685171	0	A	.	bias_e_value=2912690	bias_p_value=0.998363	consensus_score=148.8	fisher_strand_p_value=1	frequency=2.286e-01	ks_quality_p_value=0.943335	major_base=A	major_cov=53/1	major_frequency=7.714e-01	minor_base=.	minor_cov=16/0	new_cov=16/0	polymorphism_frequency=2.286e-01	polymorphism_score=43.6	prediction=polymorphism	ref_cov=53/1	total_cov=69/1
RA	2487	.	NC_007793	2685939	0	T	G	consensus_score=142.8	frequency=1	major_base=G	major_cov=50/3	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=50/3	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=50/3
RA	2488	.	NC_007793	2686641	0	C	A	consensus_score=73.8	frequency=1	major_base=A	major_cov=25/3	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=25/3	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=25/3
RA	2489	.	NC_007793	2686787	0	A	G	bias_e_value=2917470	bias_p_value=1	consensus_score=43.4	fisher_strand_p_value=1	frequency=2.703e-01	ks_quality_p_value=1	major_base=A	major_cov=26/1	major_frequency=7.297e-01	minor_base=G	minor_cov=10/0	new_cov=10/0	polymorphism_frequency=2.703e-01	polymorphism_score=12.1	prediction=polymorphism	ref_cov=26/1	total_cov=36/1
RA	2490	.	NC_007793	2686792	0	A	G	bias_e_value=2736390	bias_p_value=0.937934	consensus_score=8.7	fisher_strand_p_value=1	frequency=4.242e-01	ks_quality_p_value=0.669038	major_base=A	major_cov=18/1	major_frequency=5.758e-01	minor_base=G	minor_cov=14/0	new_cov=14/0	polymorphism_frequency=4.242e-01	polymorphism_score=23.4	prediction=polymorphism	ref_cov=18/1	total_cov=32/1
RA	2491	.	NC_007793	2686795	0	A	G	bias_e_value=2917470	bias_p_value=1	consensus_score=14.6	fisher_strand_p_value=1	frequency=4.242e-01	ks_quality_p_value=1	major_base=A	major_cov=18/1	major_frequency=5.758e-01	minor_base=G	minor_cov=14/0	new_cov=14/0	polymorphism_frequency=4.242e-01	polymorphism_score=21.4	prediction=polymorphism	ref_cov=18/1	total_cov=32/1
RA	2492	.	NC_007793	2690352	0	A	G	consensus_score=39.3	frequency=1	major_base=G	major_cov=1/16	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/16	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/16
RA	2493	.	NC_007793	2694487	0	A	C	bias_e_value=7513.87	bias_p_value=0.00257547	consensus_score=11.1	fisher_strand_p_value=0.101224	frequency=5.161e-01	ks_quality_p_value=0.00277204	major_base=C	major_cov=0/16	major_frequency=5.161e-01	minor_base=A	minor_cov=3/12	new_cov=0/16	polymorphism_frequency=5.161e-01	polymorphism_score=30.6	prediction=polymorphism	ref_cov=3/12	total_cov=3/28
RA	2494	.	NC_007793	2698243	0	T	C	bias_e_value=2917460	bias_p_value=0.999999	consensus_score=1850.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.998319	major_base=C	major_cov=674/15	major_frequency=9.986e-01	minor_base=A	minor_cov=1/0	new_cov=674/15	polymorphism_frequency=9.986e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=675/15
RA	2495	.	NC_007793	2708564	0	T	G	consensus_score=49.5	frequency=1	major_base=G	major_cov=2/18	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=2/18	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=2/18
RA	2496	.	NC_007793	2709872	0	T	C	consensus_score=98.2	frequency=1	major_base=C	major_cov=6/31	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=6/31	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=6/31
RA	2497	.	NC_007793	2710106	0	A	T	consensus_score=547.7	frequency=1	major_base=T	major_cov=8/190	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=8/190	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=8/190
RA	2498	.	NC_007793	2711043	1	.	A	consensus_score=61.2	frequency=1	major_base=A	major_cov=0/22	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/22	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/22
RA	2499	.	NC_007793	2711073	0	A	C	consensus_score=44.7	frequency=1	major_base=C	major_cov=0/18	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/18	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/18
RA	2500	.	NC_007793	2711155	0	A	.	bias_e_value=2818410	bias_p_value=0.966046	consensus_score=209.2	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.750989	major_base=.	major_cov=0/55	major_frequency=9.821e-01	minor_base=A	minor_cov=0/1	new_cov=0/55	polymorphism_frequency=9.821e-01	polymorphism_score=-2.6	prediction=consensus	ref_cov=0/1	total_cov=0/56
RA	2501	.	NC_007793	2711212	0	G	A	consensus_score=74.5	frequency=1	major_base=A	major_cov=4/24	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=4/24	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=4/24
RA	2502	.	NC_007793	2712483	0	C	T	bias_e_value=885336	bias_p_value=0.30346	consensus_score=1574.0	fisher_strand_p_value=0.0886525	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=49/514	major_frequency=9.982e-01	minor_base=A	minor_cov=1/0	new_cov=49/514	polymorphism_frequency=9.982e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=50/514
RA	2503	.	NC_007793	2717834	0	C	T	consensus_score=31.0	frequency=1	major_base=T	major_cov=0/13	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=0/13	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/13
RA	2504	.	NC_007793	2719734	0	G	A	consensus_score=136.0	frequency=1	major_base=A	major_cov=51/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=51/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=51/1
RA	2505	.	NC_007793	2719781	0	A	G	bias_e_value=1515140	bias_p_value=0.519334	consensus_score=64.3	fisher_strand_p_value=1	frequency=2.250e-01	ks_quality_p_value=0.198417	major_base=A	major_cov=30/1	major_frequency=7.750e-01	minor_base=G	minor_cov=9/0	new_cov=9/0	polymorphism_frequency=2.250e-01	polymorphism_score=10.2	prediction=polymorphism	ref_cov=30/1	total_cov=40/1
RA	2506	.	NC_007793	2719782	0	T	C	bias_e_value=2823610	bias_p_value=0.967827	consensus_score=56.1	fisher_strand_p_value=1	frequency=2.432e-01	ks_quality_p_value=0.757303	major_base=T	major_cov=27/1	major_frequency=7.568e-01	minor_base=C	minor_cov=9/0	new_cov=9/0	polymorphism_frequency=2.432e-01	polymorphism_score=10.5	prediction=polymorphism	ref_cov=27/1	total_cov=39/1
RA	2507	.	NC_007793	2721335	0	T	C	consensus_score=315.9	frequency=1	major_base=C	major_cov=109/8	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=109/8	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=109/8
RA	2508	.	NC_007793	2721367	0	A	G	consensus_score=361.6	frequency=1	major_base=G	major_cov=102/27	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=102/27	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=102/27
RA	2509	.	NC_007793	2722195	0	C	T	consensus_score=430.3	frequency=1	major_base=T	major_cov=9/143	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=9/143	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=9/143
RA	2510	.	NC_007793	2733322	0	G	T	consensus_score=27.4	frequency=1	major_base=T	major_cov=12/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=12/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=12/0
RA	2511	.	NC_007793	2735004	0	C	T	bias_e_value=55.213	bias_p_value=1.8925e-05	consensus_score=154.6	fisher_strand_p_value=1	frequency=3.007e-01	ks_quality_p_value=1.30043e-06	major_base=C	major_cov=2/105	major_frequency=6.993e-01	minor_base=T	minor_cov=0/46	new_cov=0/46	polymorphism_frequency=3.007e-01	polymorphism_score=83.5	prediction=polymorphism	ref_cov=2/105	total_cov=2/151
RA	2512	.	NC_007793	2735010	0	A	G	bias_e_value=2080550	bias_p_value=0.713134	consensus_score=278.3	fisher_strand_p_value=0.601853	frequency=2.025e-01	ks_quality_p_value=0.574763	major_base=A	major_cov=4/122	major_frequency=7.975e-01	minor_base=G	minor_cov=2/30	new_cov=2/30	polymorphism_frequency=2.025e-01	polymorphism_score=48.7	prediction=polymorphism	ref_cov=4/122	total_cov=6/158
RA	2513	.	NC_007793	2735060	0	C	A	consensus_score=654.3	frequency=1	major_base=A	major_cov=6/220	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=6/220	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=6/220
RA	2514	.	NC_007793	2737328	0	G	T	bias_e_value=2917470	bias_p_value=1	consensus_score=575.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=5/200	major_frequency=9.951e-01	minor_base=G	minor_cov=0/1	new_cov=5/200	polymorphism_frequency=9.951e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=5/201
RA	2515	.	NC_007793	2740597	0	G	A	consensus_score=15.8	frequency=1	major_base=A	major_cov=6/2	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=6/2	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=6/2
RA	2516	.	NC_007793	2742108	0	C	T	bias_e_value=2917470	bias_p_value=1	consensus_score=26.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=1/10	major_frequency=9.167e-01	minor_base=G	minor_cov=0/1	new_cov=1/10	polymorphism_frequency=9.167e-01	polymorphism_score=-5.8	prediction=consensus	ref_cov=0/0	total_cov=1/11
RA	2517	.	NC_007793	2742999	0	T	G	bias_e_value=2917470	bias_p_value=1	consensus_score=15.0	fisher_strand_p_value=1	frequency=7.059e-01	ks_quality_p_value=1	major_base=G	major_cov=12/0	major_frequency=7.059e-01	minor_base=T	minor_cov=5/0	new_cov=12/0	polymorphism_frequency=7.059e-01	polymorphism_score=7.0	prediction=polymorphism	ref_cov=5/0	total_cov=18/0
RA	2518	.	NC_007793	2743321	0	T	A	bias_e_value=2.90847e-114	bias_p_value=9.96914e-121	consensus_score=1914.5	fisher_strand_p_value=9.02841e-118	frequency=2.122e-01	ks_quality_p_value=3.90233e-06	major_base=T	major_cov=649/153	major_frequency=7.878e-01	minor_base=A	minor_cov=1/215	new_cov=1/215	polymorphism_frequency=2.122e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=649/153	total_cov=653/368
RA	2519	.	NC_007793	2743958	0	G	A	bias_e_value=2255.94	bias_p_value=0.000773252	consensus_score=-4.4	fisher_strand_p_value=0.00985829	frequency=4.792e-01	ks_quality_p_value=0.00745738	major_base=G	major_cov=7/18	major_frequency=5.208e-01	minor_base=A	minor_cov=0/23	new_cov=0/23	polymorphism_frequency=4.792e-01	polymorphism_score=50.9	prediction=polymorphism	ref_cov=7/18	total_cov=7/46
RA	2520	.	NC_007793	2753451	0	T	G	consensus_score=56.9	frequency=1	major_base=G	major_cov=23/0	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=23/0	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=23/0
RA	2521	.	NC_007793	2758338	0	C	.	bias_e_value=1359220	bias_p_value=0.465889	consensus_score=35.4	fisher_strand_p_value=0.491935	frequency=4.375e-01	ks_quality_p_value=0.339474	major_base=C	major_cov=2/16	major_frequency=5.625e-01	minor_base=.	minor_cov=0/14	new_cov=0/14	polymorphism_frequency=4.375e-01	polymorphism_score=49.2	prediction=polymorphism	ref_cov=2/16	total_cov=2/30
RA	2522	.	NC_007793	2758348	0	A	G	bias_e_value=1984190	bias_p_value=0.680107	consensus_score=67.7	fisher_strand_p_value=0.408741	frequency=2.222e-01	ks_quality_p_value=0.773258	major_base=A	major_cov=10/25	major_frequency=7.778e-01	minor_base=G	minor_cov=1/9	new_cov=1/9	polymorphism_frequency=2.222e-01	polymorphism_score=10.8	prediction=polymorphism	ref_cov=10/25	total_cov=11/37
RA	2523	.	NC_007793	2759517	0	C	A	consensus_score=34.6	frequency=1	major_base=A	major_cov=3/11	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=3/11	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=3/11
RA	2524	.	NC_007793	2759623	0	T	C	consensus_score=67.9	frequency=1	major_base=C	major_cov=3/26	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=3/26	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=3/26
RA	2525	.	NC_007793	2774780	0	A	C	bias_e_value=1478100	bias_p_value=0.506638	consensus_score=379.8	fisher_strand_p_value=0.190662	frequency=2.742e-01	ks_quality_p_value=1	major_base=A	major_cov=6/129	major_frequency=7.258e-01	minor_base=C	minor_cov=0/51	new_cov=0/51	polymorphism_frequency=2.742e-01	polymorphism_score=97.9	prediction=polymorphism	ref_cov=6/129	total_cov=6/182
RA	2526	.	NC_007793	2774784	0	C	T	bias_e_value=70301.4	bias_p_value=0.0240967	consensus_score=292.5	fisher_strand_p_value=0.338081	frequency=2.443e-01	ks_quality_p_value=0.0107747	major_base=C	major_cov=6/127	major_frequency=7.557e-01	minor_base=T	minor_cov=0/43	new_cov=0/43	polymorphism_frequency=2.443e-01	polymorphism_score=79.6	prediction=polymorphism	ref_cov=6/127	total_cov=6/182
RA	2527	.	NC_007793	2774814	0	T	C	bias_e_value=2917470	bias_p_value=1	consensus_score=276.5	fisher_strand_p_value=1	frequency=2.113e-01	ks_quality_p_value=1	major_base=T	major_cov=2/110	major_frequency=7.887e-01	minor_base=C	minor_cov=0/30	new_cov=0/30	polymorphism_frequency=2.113e-01	polymorphism_score=37.4	prediction=polymorphism	ref_cov=2/110	total_cov=2/140
RA	2528	.	NC_007793	2774816	0	A	C	bias_e_value=2917470	bias_p_value=1	consensus_score=287.9	fisher_strand_p_value=1	frequency=2.746e-01	ks_quality_p_value=1	major_base=A	major_cov=2/101	major_frequency=7.254e-01	minor_base=C	minor_cov=0/39	new_cov=0/39	polymorphism_frequency=2.746e-01	polymorphism_score=79.6	prediction=polymorphism	ref_cov=2/101	total_cov=2/140
RA	2529	.	NC_007793	2774817	0	G	A	bias_e_value=2894810	bias_p_value=0.992233	consensus_score=260.2	fisher_strand_p_value=1	frequency=2.042e-01	ks_quality_p_value=0.877985	major_base=G	major_cov=2/111	major_frequency=7.958e-01	minor_base=A	minor_cov=0/29	new_cov=0/29	polymorphism_frequency=2.042e-01	polymorphism_score=44.7	prediction=polymorphism	ref_cov=2/111	total_cov=2/140
RA	2530	.	NC_007793	2774820	0	T	A	bias_e_value=2831840	bias_p_value=0.970649	consensus_score=271.7	fisher_strand_p_value=1	frequency=2.042e-01	ks_quality_p_value=0.76771	major_base=T	major_cov=2/111	major_frequency=7.958e-01	minor_base=A	minor_cov=0/29	new_cov=0/29	polymorphism_frequency=2.042e-01	polymorphism_score=54.4	prediction=polymorphism	ref_cov=2/111	total_cov=2/140
RA	2531	.	NC_007793	2774823	0	A	G	bias_e_value=2917250	bias_p_value=0.999926	consensus_score=292.0	fisher_strand_p_value=1	frequency=2.089e-01	ks_quality_p_value=0.987894	major_base=A	major_cov=2/123	major_frequency=7.911e-01	minor_base=G	minor_cov=0/33	new_cov=0/33	polymorphism_frequency=2.089e-01	polymorphism_score=39.6	prediction=polymorphism	ref_cov=2/123	total_cov=2/156
RA	2532	.	NC_007793	2774834	0	A	C	bias_e_value=2917470	bias_p_value=1	consensus_score=362.1	fisher_strand_p_value=1	frequency=2.692e-01	ks_quality_p_value=1	major_base=A	major_cov=1/132	major_frequency=7.308e-01	minor_base=C	minor_cov=0/49	new_cov=0/49	polymorphism_frequency=2.692e-01	polymorphism_score=97.1	prediction=polymorphism	ref_cov=1/132	total_cov=1/181
RA	2533	.	NC_007793	2774949	0	G	A	bias_e_value=69159.7	bias_p_value=0.0237054	consensus_score=139.9	fisher_strand_p_value=0.168405	frequency=2.627e-01	ks_quality_p_value=0.0212176	major_base=G	major_cov=1/86	major_frequency=7.373e-01	minor_base=A	minor_cov=2/29	new_cov=2/29	polymorphism_frequency=2.627e-01	polymorphism_score=55.8	prediction=polymorphism	ref_cov=1/86	total_cov=3/116
RA	2534	.	NC_007793	2774955	0	G	A	bias_e_value=1244700	bias_p_value=0.426637	consensus_score=137.0	fisher_strand_p_value=0.220294	frequency=3.051e-01	ks_quality_p_value=0.66207	major_base=G	major_cov=1/81	major_frequency=6.949e-01	minor_base=A	minor_cov=2/34	new_cov=2/34	polymorphism_frequency=3.051e-01	polymorphism_score=65.8	prediction=polymorphism	ref_cov=1/81	total_cov=3/116
RA	2535	.	NC_007793	2774960	0	A	C	bias_e_value=1659310	bias_p_value=0.56875	consensus_score=186.2	fisher_strand_p_value=0.230494	frequency=3.130e-01	ks_quality_p_value=1	major_base=A	major_cov=1/78	major_frequency=6.870e-01	minor_base=C	minor_cov=2/34	new_cov=2/34	polymorphism_frequency=3.130e-01	polymorphism_score=75.0	prediction=polymorphism	ref_cov=1/78	total_cov=3/114
RA	2536	.	NC_007793	2774961	0	A	G	bias_e_value=16088.8	bias_p_value=0.00551465	consensus_score=151.5	fisher_strand_p_value=0.166198	frequency=2.609e-01	ks_quality_p_value=0.00398867	major_base=A	major_cov=1/84	major_frequency=7.391e-01	minor_base=G	minor_cov=2/28	new_cov=2/28	polymorphism_frequency=2.609e-01	polymorphism_score=48.6	prediction=polymorphism	ref_cov=1/84	total_cov=3/114
RA	2537	.	NC_007793	2774976	0	T	C	bias_e_value=2554450	bias_p_value=0.87557	consensus_score=152.5	fisher_strand_p_value=0.596616	frequency=3.264e-01	ks_quality_p_value=0.912855	major_base=T	major_cov=2/95	major_frequency=6.736e-01	minor_base=C	minor_cov=2/45	new_cov=2/45	polymorphism_frequency=3.264e-01	polymorphism_score=79.5	prediction=polymorphism	ref_cov=2/95	total_cov=4/140
RA	2538	.	NC_007793	2774978	0	A	C	bias_e_value=2916990	bias_p_value=0.999838	consensus_score=157.1	fisher_strand_p_value=1	frequency=4.621e-01	ks_quality_p_value=0.982028	major_base=A	major_cov=2/69	major_frequency=5.379e-01	minor_base=C	minor_cov=2/59	new_cov=2/59	polymorphism_frequency=4.621e-01	polymorphism_score=150.4	prediction=polymorphism	ref_cov=2/69	total_cov=4/129
RA	2539	.	NC_007793	2774979	0	G	A	bias_e_value=1989990	bias_p_value=0.682094	consensus_score=115.2	fisher_strand_p_value=0.605242	frequency=3.409e-01	ks_quality_p_value=0.525064	major_base=G	major_cov=2/85	major_frequency=6.591e-01	minor_base=A	minor_cov=2/43	new_cov=2/43	polymorphism_frequency=3.409e-01	polymorphism_score=89.6	prediction=polymorphism	ref_cov=2/85	total_cov=4/128
RA	2540	.	NC_007793	2774982	0	T	A	bias_e_value=2056720	bias_p_value=0.704967	consensus_score=145.7	fisher_strand_p_value=0.592339	frequency=3.200e-01	ks_quality_p_value=0.571142	major_base=T	major_cov=2/83	major_frequency=6.800e-01	minor_base=A	minor_cov=2/38	new_cov=2/38	polymorphism_frequency=3.200e-01	polymorphism_score=90.0	prediction=polymorphism	ref_cov=2/83	total_cov=4/123
RA	2541	.	NC_007793	2775122	0	A	C	bias_e_value=2917200	bias_p_value=0.999907	consensus_score=88.2	fisher_strand_p_value=1	frequency=2.195e-01	ks_quality_p_value=0.986374	major_base=A	major_cov=1/31	major_frequency=7.805e-01	minor_base=C	minor_cov=0/9	new_cov=0/9	polymorphism_frequency=2.195e-01	polymorphism_score=10.6	prediction=polymorphism	ref_cov=1/31	total_cov=1/40
RA	2542	.	NC_007793	2775126	0	C	A	bias_e_value=2837890	bias_p_value=0.972724	consensus_score=63.4	fisher_strand_p_value=1	frequency=2.222e-01	ks_quality_p_value=0.775716	major_base=C	major_cov=1/27	major_frequency=7.778e-01	minor_base=A	minor_cov=0/8	new_cov=0/8	polymorphism_frequency=2.222e-01	polymorphism_score=11.8	prediction=polymorphism	ref_cov=1/27	total_cov=1/38
RA	2543	.	NC_007793	2775140	0	A	C	bias_e_value=2917470	bias_p_value=1	consensus_score=13.3	fisher_strand_p_value=1	frequency=5.000e-01	ks_quality_p_value=1	major_base=A	major_cov=0/7	major_frequency=5.000e-01	minor_base=C	minor_cov=0/7	new_cov=0/7	polymorphism_frequency=5.000e-01	polymorphism_score=11.6	prediction=polymorphism	ref_cov=0/7	total_cov=0/14
RA	2544	.	NC_007793	2775158	0	A	C	bias_e_value=2184880	bias_p_value=0.748895	consensus_score=10.0	fisher_strand_p_value=1	frequency=5.714e-01	ks_quality_p_value=0.381255	major_base=C	major_cov=0/8	major_frequency=5.714e-01	minor_base=A	minor_cov=0/6	new_cov=0/8	polymorphism_frequency=5.714e-01	polymorphism_score=11.4	prediction=polymorphism	ref_cov=0/6	total_cov=0/14
RA	2545	.	NC_007793	2775183	0	G	A	bias_e_value=1009240	bias_p_value=0.345931	consensus_score=48.1	fisher_strand_p_value=0.465241	frequency=2.647e-01	ks_quality_p_value=0.22979	major_base=G	major_cov=1/24	major_frequency=7.353e-01	minor_base=A	minor_cov=1/8	new_cov=1/8	polymorphism_frequency=2.647e-01	polymorphism_score=11.7	prediction=polymorphism	ref_cov=1/24	total_cov=2/32
RA	2546	.	NC_007793	2775194	0	A	C	bias_e_value=2902150	bias_p_value=0.99475	consensus_score=74.9	fisher_strand_p_value=1	frequency=2.105e-01	ks_quality_p_value=0.899298	major_base=A	major_cov=2/28	major_frequency=7.895e-01	minor_base=C	minor_cov=0/8	new_cov=0/8	polymorphism_frequency=2.105e-01	polymorphism_score=10.2	prediction=polymorphism	ref_cov=2/28	total_cov=2/36
RA	2547	.	NC_007793	2775724	0	A	G	consensus_score=209.2	frequency=1	major_base=G	major_cov=3/76	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=3/76	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=3/76
RA	2548	.	NC_007793	2791162	0	G	A	consensus_score=68.7	frequency=1	major_base=A	major_cov=25/2	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=25/2	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=25/2
RA	2549	.	NC_007793	2796433	0	G	A	bias_e_value=2913690	bias_p_value=0.998703	consensus_score=942.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.949507	major_base=A	major_cov=320/15	major_frequency=9.970e-01	minor_base=T	minor_cov=1/0	new_cov=320/15	polymorphism_frequency=9.970e-01	polymorphism_score=-5.4	prediction=consensus	ref_cov=0/0	total_cov=321/16
RA	2550	.	NC_007793	2797001	0	A	G	bias_e_value=65942	bias_p_value=0.0226025	consensus_score=796.6	fisher_strand_p_value=0.00367547	frequency=2.405e-01	ks_quality_p_value=0.919165	major_base=A	major_cov=398/22	major_frequency=7.595e-01	minor_base=G	minor_cov=133/0	new_cov=133/0	polymorphism_frequency=2.405e-01	polymorphism_score=232.0	prediction=polymorphism	ref_cov=398/22	total_cov=531/22
RA	2551	.	NC_007793	2797001	1	.	G	bias_e_value=72567.8	bias_p_value=0.0248736	consensus_score=1465.2	fisher_strand_p_value=0.0118875	frequency=2.025e-01	ks_quality_p_value=0.31811	major_base=.	major_cov=419/22	major_frequency=7.975e-01	minor_base=G	minor_cov=112/0	new_cov=112/0	polymorphism_frequency=2.025e-01	polymorphism_score=inf	prediction=polymorphism	ref_cov=419/22	total_cov=531/22
RA	2552	.	NC_007793	2797610	0	T	A	bias_e_value=1508230	bias_p_value=0.516967	consensus_score=63.1	fisher_strand_p_value=0.283019	frequency=7.170e-01	ks_quality_p_value=0.695914	major_base=A	major_cov=38/0	major_frequency=7.170e-01	minor_base=T	minor_cov=14/1	new_cov=38/0	polymorphism_frequency=7.170e-01	polymorphism_score=32.3	prediction=polymorphism	ref_cov=14/1	total_cov=52/1
RA	2553	.	NC_007793	2798664	0	T	A	bias_e_value=2917470	bias_p_value=1	consensus_score=55.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=0/21	major_frequency=9.545e-01	minor_base=C	minor_cov=0/1	new_cov=0/21	polymorphism_frequency=9.545e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=0/22
RA	2554	.	NC_007793	2811673	0	G	A	consensus_score=23.8	frequency=1	major_base=A	major_cov=8/3	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=8/3	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=8/3
RA	2555	.	NC_007793	2819073	0	T	C	consensus_score=71.6	frequency=1	major_base=C	major_cov=1/27	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/27	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/27
RA	2556	.	NC_007793	2821162	0	A	T	bias_e_value=2564500	bias_p_value=0.879015	consensus_score=55.7	fisher_strand_p_value=0.550342	frequency=2.424e-01	ks_quality_p_value=1	major_base=A	major_cov=4/21	major_frequency=7.576e-01	minor_base=T	minor_cov=0/8	new_cov=0/8	polymorphism_frequency=2.424e-01	polymorphism_score=11.9	prediction=polymorphism	ref_cov=4/21	total_cov=4/29
RA	2557	.	NC_007793	2835264	0	C	G	bias_e_value=507277	bias_p_value=0.173876	consensus_score=135.1	fisher_strand_p_value=0.328658	frequency=2.400e-01	ks_quality_p_value=0.126577	major_base=C	major_cov=5/52	major_frequency=7.600e-01	minor_base=G	minor_cov=0/18	new_cov=0/18	polymorphism_frequency=2.400e-01	polymorphism_score=42.9	prediction=polymorphism	ref_cov=5/52	total_cov=5/70
RA	2558	.	NC_007793	2835272	0	C	G	bias_e_value=835.829	bias_p_value=0.000286491	consensus_score=89.9	fisher_strand_p_value=0.16787	frequency=3.250e-01	ks_quality_p_value=0.000147001	major_base=C	major_cov=5/49	major_frequency=6.750e-01	minor_base=G	minor_cov=0/26	new_cov=0/26	polymorphism_frequency=3.250e-01	polymorphism_score=66.0	prediction=polymorphism	ref_cov=5/49	total_cov=5/75
RA	2559	.	NC_007793	2835276	0	C	T	bias_e_value=1415130	bias_p_value=0.485054	consensus_score=95.0	fisher_strand_p_value=0.177902	frequency=2.805e-01	ks_quality_p_value=1	major_base=C	major_cov=6/53	major_frequency=7.195e-01	minor_base=T	minor_cov=0/23	new_cov=0/23	polymorphism_frequency=2.805e-01	polymorphism_score=38.6	prediction=polymorphism	ref_cov=6/53	total_cov=6/76
RA	2560	.	NC_007793	2839280	0	C	A	consensus_score=131.8	frequency=1	major_base=A	major_cov=1/46	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/46	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/46
RA	2561	.	NC_007793	2841262	0	G	T	consensus_score=50.3	frequency=1	major_base=T	major_cov=5/14	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=5/14	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=5/14
RA	2562	.	NC_007793	2853237	1	.	T	bias_e_value=2780580	bias_p_value=0.953079	consensus_score=23.3	fisher_strand_p_value=1	frequency=2.857e-01	ks_quality_p_value=0.70974	major_base=.	major_cov=15/0	major_frequency=7.143e-01	minor_base=T	minor_cov=6/0	new_cov=6/0	polymorphism_frequency=2.857e-01	polymorphism_score=20.3	prediction=polymorphism	ref_cov=15/0	total_cov=21/0
RA	2563	.	NC_007793	2853243	0	C	G	bias_e_value=2917470	bias_p_value=1	consensus_score=16.8	fisher_strand_p_value=1	frequency=3.529e-01	ks_quality_p_value=1	major_base=C	major_cov=11/0	major_frequency=6.471e-01	minor_base=G	minor_cov=6/0	new_cov=6/0	polymorphism_frequency=3.529e-01	polymorphism_score=10.1	prediction=polymorphism	ref_cov=11/0	total_cov=17/0
RA	2564	.	NC_007793	2853880	0	T	A	bias_e_value=1446690	bias_p_value=0.495871	consensus_score=-3.1	fisher_strand_p_value=0.205882	frequency=5.000e-01	ks_quality_p_value=0.894839	major_base=T	major_cov=6/3	major_frequency=5.000e-01	minor_base=A	minor_cov=9/0	new_cov=9/0	polymorphism_frequency=5.000e-01	polymorphism_score=16.5	prediction=polymorphism	ref_cov=6/3	total_cov=15/3
RA	2565	.	NC_007793	2864643	0	G	A	bias_e_value=1409000	bias_p_value=0.482952	consensus_score=187.6	fisher_strand_p_value=0.337235	frequency=2.195e-01	ks_quality_p_value=0.52393	major_base=G	major_cov=90/6	major_frequency=7.805e-01	minor_base=A	minor_cov=27/0	new_cov=27/0	polymorphism_frequency=2.195e-01	polymorphism_score=43.7	prediction=polymorphism	ref_cov=90/6	total_cov=117/6
RA	2566	.	NC_007793	2872409	0	T	A	consensus_score=103.5	frequency=1	major_base=A	major_cov=1/35	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/35	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/35
MC	2567	.	NC_007790	1	3125	0	0	left_inside_cov=0	left_outside_cov=NA	right_inside_cov=0	right_outside_cov=NA
MC	2568	.	NC_007791	1	4439	0	0	left_inside_cov=0	left_outside_cov=NA	right_inside_cov=0	right_outside_cov=NA
MC	2569	.	NC_007792	1	37136	0	0	left_inside_cov=0	left_outside_cov=NA	right_inside_cov=0	right_outside_cov=NA
MC	2570	.	NC_007793	1	3	0	0	left_inside_cov=0	left_outside_cov=NA	right_inside_cov=0	right_outside_cov=1
MC	2571	.	NC_007793	179	335	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2572	.	NC_007793	3367	3367	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2573	.	NC_007793	14186	14211	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2574	.	NC_007793	14528	14611	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2575	.	NC_007793	14712	14752	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	2576	.	NC_007793	23981	24010	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2577	.	NC_007793	24285	24354	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2578	.	NC_007793	29637	29674	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2579	.	NC_007793	37006	37051	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2580	.	NC_007793	42478	42741	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2581	.	NC_007793	42840	42858	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2582	.	NC_007793	43219	43270	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2583	.	NC_007793	43490	43519	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2584	.	NC_007793	43720	43807	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2585	.	NC_007793	43925	43994	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2586	.	NC_007793	44609	44634	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2587	.	NC_007793	45396	45443	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2588	.	NC_007793	48587	48587	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2589	.	NC_007793	49234	49248	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2590	.	NC_007793	56761	56920	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2591	.	NC_007793	57629	57643	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2592	.	NC_007793	57945	62394	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	2593	.	NC_007793	62668	62872	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	2594	.	NC_007793	62973	65508	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2595	.	NC_007793	65622	65633	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2596	.	NC_007793	66027	66178	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2597	.	NC_007793	66277	66294	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2598	.	NC_007793	66482	66540	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	2599	.	NC_007793	66634	67792	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2600	.	NC_007793	67959	68742	0	0	left_inside_cov=0	left_outside_cov=3	right_inside_cov=0	right_outside_cov=1
MC	2601	.	NC_007793	68838	76279	0	44	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=4
MC	2602	.	NC_007793	76511	76900	0	87	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2603	.	NC_007793	77006	77445	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2604	.	NC_007793	77545	86226	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2605	.	NC_007793	86328	88886	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=3
MC	2606	.	NC_007793	93807	93857	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2607	.	NC_007793	94050	94062	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2608	.	NC_007793	96952	96977	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2609	.	NC_007793	100871	100949	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2610	.	NC_007793	101063	101100	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2611	.	NC_007793	103463	103472	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2612	.	NC_007793	104187	104208	0	0	left_inside_cov=0	left_outside_cov=3	right_inside_cov=0	right_outside_cov=1
MC	2613	.	NC_007793	108849	108850	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2614	.	NC_007793	108951	109036	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2615	.	NC_007793	110006	110109	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2616	.	NC_007793	110210	110265	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2617	.	NC_007793	110643	110717	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2618	.	NC_007793	118584	118585	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2619	.	NC_007793	118685	118711	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2620	.	NC_007793	120781	120809	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2621	.	NC_007793	120948	120975	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2622	.	NC_007793	123725	123743	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2623	.	NC_007793	124669	124691	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2624	.	NC_007793	129984	129990	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2625	.	NC_007793	130912	130977	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2626	.	NC_007793	134282	134334	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	2627	.	NC_007793	147937	147957	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	2628	.	NC_007793	148096	148174	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2629	.	NC_007793	154046	154140	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2630	.	NC_007793	154985	155015	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2631	.	NC_007793	156856	156877	0	0	left_inside_cov=0	left_outside_cov=4	right_inside_cov=0	right_outside_cov=1
MC	2632	.	NC_007793	157277	157355	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2633	.	NC_007793	157762	157781	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2634	.	NC_007793	157926	157926	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2635	.	NC_007793	161127	161148	0	0	left_inside_cov=0	left_outside_cov=3	right_inside_cov=0	right_outside_cov=1
MC	2636	.	NC_007793	162175	162182	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2637	.	NC_007793	162777	162846	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2638	.	NC_007793	163729	163756	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2639	.	NC_007793	165003	165146	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2640	.	NC_007793	165464	165509	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2641	.	NC_007793	166471	166472	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2642	.	NC_007793	168144	168191	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2643	.	NC_007793	168789	168794	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2644	.	NC_007793	168962	168977	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2645	.	NC_007793	169393	169397	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2646	.	NC_007793	169511	169598	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=3
MC	2647	.	NC_007793	170724	170726	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2648	.	NC_007793	170827	171049	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2649	.	NC_007793	171382	171734	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	2650	.	NC_007793	171971	171978	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2651	.	NC_007793	172792	172799	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2652	.	NC_007793	173948	174294	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2653	.	NC_007793	174628	174673	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2654	.	NC_007793	174938	174974	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2655	.	NC_007793	175078	175113	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2656	.	NC_007793	175235	175268	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2657	.	NC_007793	176294	176414	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2658	.	NC_007793	176515	176520	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2659	.	NC_007793	177184	177249	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2660	.	NC_007793	177458	177460	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2661	.	NC_007793	177607	177635	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2662	.	NC_007793	178165	178259	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2663	.	NC_007793	178436	178474	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2664	.	NC_007793	179694	179733	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2665	.	NC_007793	181578	181593	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2666	.	NC_007793	181689	181743	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2667	.	NC_007793	182231	182350	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2668	.	NC_007793	184455	184465	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2669	.	NC_007793	184566	184675	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2670	.	NC_007793	184994	185008	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2671	.	NC_007793	185272	185321	0	0	left_inside_cov=0	left_outside_cov=3	right_inside_cov=0	right_outside_cov=1
MC	2672	.	NC_007793	190741	190745	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2673	.	NC_007793	193616	193642	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2674	.	NC_007793	195084	195142	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2675	.	NC_007793	196219	196223	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2676	.	NC_007793	196402	196421	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2677	.	NC_007793	196522	196525	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2678	.	NC_007793	197167	197213	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2679	.	NC_007793	197313	197364	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2680	.	NC_007793	197488	197601	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2681	.	NC_007793	197911	197912	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2682	.	NC_007793	199398	199422	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2683	.	NC_007793	199528	199537	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2684	.	NC_007793	199906	200002	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2685	.	NC_007793	201190	201247	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2686	.	NC_007793	201464	201471	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2687	.	NC_007793	201709	201752	0	0	left_inside_cov=0	left_outside_cov=3	right_inside_cov=0	right_outside_cov=1
MC	2688	.	NC_007793	212615	212644	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2689	.	NC_007793	212910	212935	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2690	.	NC_007793	213974	213987	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2691	.	NC_007793	214220	214253	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2692	.	NC_007793	215182	215212	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	2693	.	NC_007793	215534	215569	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2694	.	NC_007793	216146	216242	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=3
MC	2695	.	NC_007793	216886	216970	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2696	.	NC_007793	217071	217150	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2697	.	NC_007793	221245	221320	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2698	.	NC_007793	224368	224463	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2699	.	NC_007793	224564	224751	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2700	.	NC_007793	225482	225484	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2701	.	NC_007793	227774	227826	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2702	.	NC_007793	228492	228514	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2703	.	NC_007793	234906	234913	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2704	.	NC_007793	236697	236730	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2705	.	NC_007793	236844	236848	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2706	.	NC_007793	237056	237066	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2707	.	NC_007793	237463	237533	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2708	.	NC_007793	238947	239058	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	2709	.	NC_007793	243447	243495	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2710	.	NC_007793	244332	244391	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	2711	.	NC_007793	245889	245932	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2712	.	NC_007793	246033	246054	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=3
MC	2713	.	NC_007793	249866	249938	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2714	.	NC_007793	255489	255497	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2715	.	NC_007793	255947	255950	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2716	.	NC_007793	256298	256476	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2717	.	NC_007793	260229	260294	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2718	.	NC_007793	260395	260413	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2719	.	NC_007793	265733	265761	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2720	.	NC_007793	272315	272389	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2721	.	NC_007793	273764	273767	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2722	.	NC_007793	273859	273893	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2723	.	NC_007793	287070	287070	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2724	.	NC_007793	287219	287345	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2725	.	NC_007793	287781	287880	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2726	.	NC_007793	288190	288204	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2727	.	NC_007793	288447	288453	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2728	.	NC_007793	288653	288713	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2729	.	NC_007793	289107	289111	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2730	.	NC_007793	290118	290119	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2731	.	NC_007793	290288	290304	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2732	.	NC_007793	305906	305992	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2733	.	NC_007793	308729	308740	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2734	.	NC_007793	310689	310697	0	0	left_inside_cov=0	left_outside_cov=3	right_inside_cov=0	right_outside_cov=1
MC	2735	.	NC_007793	313231	313258	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2736	.	NC_007793	314439	314501	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2737	.	NC_007793	318257	318291	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2738	.	NC_007793	318803	318890	0	65	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	2739	.	NC_007793	323367	323378	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2740	.	NC_007793	327717	327804	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2741	.	NC_007793	330416	330446	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=3
MC	2742	.	NC_007793	334218	334249	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2743	.	NC_007793	339144	339149	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2744	.	NC_007793	344535	344551	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2745	.	NC_007793	344932	344935	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2746	.	NC_007793	348142	348653	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	2747	.	NC_007793	349910	349986	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2748	.	NC_007793	352873	353011	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2749	.	NC_007793	353130	353185	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=5
MC	2750	.	NC_007793	354286	354454	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2751	.	NC_007793	355394	355408	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2752	.	NC_007793	361603	361641	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2753	.	NC_007793	362073	362084	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2754	.	NC_007793	362339	362563	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2755	.	NC_007793	362765	362786	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2756	.	NC_007793	363112	363223	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2757	.	NC_007793	363545	363576	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2758	.	NC_007793	363754	363770	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2759	.	NC_007793	364258	364271	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2760	.	NC_007793	364372	364387	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2761	.	NC_007793	364490	364530	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2762	.	NC_007793	365129	365179	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2763	.	NC_007793	366458	366485	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2764	.	NC_007793	366680	366737	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=3
MC	2765	.	NC_007793	367338	367349	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	2766	.	NC_007793	367632	367645	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2767	.	NC_007793	367746	367817	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2768	.	NC_007793	370577	370688	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2769	.	NC_007793	371541	371602	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2770	.	NC_007793	371897	371958	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2771	.	NC_007793	372157	372243	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2772	.	NC_007793	383520	383522	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2773	.	NC_007793	384730	384763	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2774	.	NC_007793	385200	385217	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=3
MC	2775	.	NC_007793	385318	385324	0	0	left_inside_cov=0	left_outside_cov=3	right_inside_cov=0	right_outside_cov=2
MC	2776	.	NC_007793	385580	385612	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2777	.	NC_007793	387943	387956	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2778	.	NC_007793	389385	389427	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2779	.	NC_007793	394851	394874	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2780	.	NC_007793	395020	395093	0	0	left_inside_cov=0	left_outside_cov=4	right_inside_cov=0	right_outside_cov=1
MC	2781	.	NC_007793	395765	395801	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2782	.	NC_007793	395902	395947	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2783	.	NC_007793	396190	396231	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	2784	.	NC_007793	396628	396643	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2785	.	NC_007793	396769	396830	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2786	.	NC_007793	396974	397016	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2787	.	NC_007793	397174	397374	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2788	.	NC_007793	397903	397906	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2789	.	NC_007793	398055	398079	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2790	.	NC_007793	404479	404555	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2791	.	NC_007793	409270	409276	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	2792	.	NC_007793	409926	409929	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2793	.	NC_007793	410949	411028	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2794	.	NC_007793	411129	411147	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2795	.	NC_007793	411292	411379	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	2796	.	NC_007793	411725	411727	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2797	.	NC_007793	411913	412011	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2798	.	NC_007793	412325	412409	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2799	.	NC_007793	413578	413590	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2800	.	NC_007793	413935	413937	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2801	.	NC_007793	414119	414161	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2802	.	NC_007793	414405	414445	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2803	.	NC_007793	414555	414564	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2804	.	NC_007793	420640	420646	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	2805	.	NC_007793	421113	421172	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2806	.	NC_007793	422589	422747	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2807	.	NC_007793	422848	422874	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2808	.	NC_007793	424233	424253	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2809	.	NC_007793	431245	431261	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2810	.	NC_007793	433520	433543	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	2811	.	NC_007793	441470	441481	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2812	.	NC_007793	443277	443287	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2813	.	NC_007793	443855	443860	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	2814	.	NC_007793	447193	447230	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2815	.	NC_007793	448132	448226	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2816	.	NC_007793	449300	449311	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2817	.	NC_007793	449500	449569	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2818	.	NC_007793	449715	449785	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2819	.	NC_007793	450252	450272	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2820	.	NC_007793	451033	451042	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2821	.	NC_007793	451938	452045	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2822	.	NC_007793	452238	452243	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=3
MC	2823	.	NC_007793	453134	453187	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2824	.	NC_007793	454207	454221	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2825	.	NC_007793	454410	454466	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2826	.	NC_007793	454690	454724	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2827	.	NC_007793	455068	455150	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2828	.	NC_007793	455251	455407	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2829	.	NC_007793	456236	456257	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2830	.	NC_007793	456431	456557	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2831	.	NC_007793	457270	457284	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2832	.	NC_007793	463283	463303	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2833	.	NC_007793	463502	463576	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2834	.	NC_007793	463792	463797	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2835	.	NC_007793	463894	464648	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2836	.	NC_007793	464890	464931	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2837	.	NC_007793	465753	465770	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2838	.	NC_007793	466048	466095	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2839	.	NC_007793	466601	466623	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=3
MC	2840	.	NC_007793	467451	467474	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2841	.	NC_007793	468268	468314	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2842	.	NC_007793	468485	468491	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2843	.	NC_007793	469111	469113	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2844	.	NC_007793	469353	469421	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2845	.	NC_007793	476153	476153	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2846	.	NC_007793	476592	476607	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2847	.	NC_007793	485688	485703	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2848	.	NC_007793	486240	486401	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2849	.	NC_007793	488655	488670	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2850	.	NC_007793	489120	489134	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2851	.	NC_007793	489532	489555	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2852	.	NC_007793	490004	490007	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2853	.	NC_007793	490307	490319	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2854	.	NC_007793	492820	492852	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2855	.	NC_007793	504166	504190	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=7
MC	2856	.	NC_007793	504470	504515	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2857	.	NC_007793	504677	504677	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2858	.	NC_007793	504910	504935	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2859	.	NC_007793	512508	512665	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2860	.	NC_007793	512766	514508	0	1672	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2861	.	NC_007793	515157	518266	2752	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2862	.	NC_007793	518547	518693	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2863	.	NC_007793	519888	519899	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2864	.	NC_007793	523718	523752	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2865	.	NC_007793	533355	533429	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2866	.	NC_007793	536963	536982	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2867	.	NC_007793	556201	556311	101	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2868	.	NC_007793	556494	558068	1574	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2869	.	NC_007793	558758	561577	2754	39	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2870	.	NC_007793	561744	561775	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2871	.	NC_007793	561929	562015	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2872	.	NC_007793	562963	562982	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2873	.	NC_007793	563450	563456	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2874	.	NC_007793	565097	565110	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2875	.	NC_007793	571092	571129	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2876	.	NC_007793	598069	598159	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2877	.	NC_007793	600748	600848	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2878	.	NC_007793	601891	601992	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	2879	.	NC_007793	607213	607213	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	2880	.	NC_007793	610854	611044	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2881	.	NC_007793	612091	612330	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2882	.	NC_007793	614149	614292	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2883	.	NC_007793	615287	615298	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2884	.	NC_007793	615399	615451	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2885	.	NC_007793	618489	618547	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2886	.	NC_007793	618648	618703	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2887	.	NC_007793	618804	618813	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2888	.	NC_007793	622274	622311	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2889	.	NC_007793	622412	622429	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2890	.	NC_007793	631071	631171	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	2891	.	NC_007793	643305	643310	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2892	.	NC_007793	652256	652313	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2893	.	NC_007793	652423	652493	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2894	.	NC_007793	657485	657514	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2895	.	NC_007793	659799	659800	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	2896	.	NC_007793	678280	678285	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2897	.	NC_007793	680823	680853	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2898	.	NC_007793	688049	688081	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2899	.	NC_007793	696649	696652	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2900	.	NC_007793	725912	725914	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	2901	.	NC_007793	726104	726182	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2902	.	NC_007793	731681	731685	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2903	.	NC_007793	733010	733028	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2904	.	NC_007793	742769	742874	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2905	.	NC_007793	749298	749408	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2906	.	NC_007793	749942	749960	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2907	.	NC_007793	755700	755748	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2908	.	NC_007793	756329	756371	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2909	.	NC_007793	757015	757095	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	2910	.	NC_007793	760891	760960	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2911	.	NC_007793	764000	764043	0	0	left_inside_cov=0	left_outside_cov=3	right_inside_cov=0	right_outside_cov=1
MC	2912	.	NC_007793	769337	769337	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2913	.	NC_007793	779111	779121	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2914	.	NC_007793	783046	783050	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2915	.	NC_007793	788312	788349	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2916	.	NC_007793	789702	789711	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2917	.	NC_007793	791473	791515	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2918	.	NC_007793	797379	797437	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2919	.	NC_007793	797771	797846	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2920	.	NC_007793	813280	813284	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2921	.	NC_007793	817003	817025	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=3
MC	2922	.	NC_007793	822490	822495	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2923	.	NC_007793	822639	822657	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2924	.	NC_007793	828897	828908	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	2925	.	NC_007793	829137	829232	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2926	.	NC_007793	834333	834348	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2927	.	NC_007793	840656	840676	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2928	.	NC_007793	841739	841739	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2929	.	NC_007793	841840	841847	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2930	.	NC_007793	842001	842051	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=5
MC	2931	.	NC_007793	857234	857239	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2932	.	NC_007793	857420	857448	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2933	.	NC_007793	857549	857673	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=3
MC	2934	.	NC_007793	858197	858202	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2935	.	NC_007793	858302	858315	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2936	.	NC_007793	861941	862108	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=16
MC	2937	.	NC_007793	863773	863826	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2938	.	NC_007793	863927	863982	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2939	.	NC_007793	866048	866101	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2940	.	NC_007793	869282	869347	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2941	.	NC_007793	869882	869979	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2942	.	NC_007793	871512	871538	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2943	.	NC_007793	872224	872238	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2944	.	NC_007793	873014	873168	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=5
MC	2945	.	NC_007793	878028	878073	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2946	.	NC_007793	881834	895414	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2947	.	NC_007793	895600	895858	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2948	.	NC_007793	904028	904039	0	0	left_inside_cov=0	left_outside_cov=3	right_inside_cov=0	right_outside_cov=1
MC	2949	.	NC_007793	911214	911224	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2950	.	NC_007793	918524	918539	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2951	.	NC_007793	934165	934173	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2952	.	NC_007793	935479	935545	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2953	.	NC_007793	935646	935649	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2954	.	NC_007793	937533	937579	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2955	.	NC_007793	937694	937716	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2956	.	NC_007793	940548	940713	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2957	.	NC_007793	941168	941174	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2958	.	NC_007793	943159	943206	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2959	.	NC_007793	944752	944758	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2960	.	NC_007793	944854	944969	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=3
MC	2961	.	NC_007793	960327	960458	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2962	.	NC_007793	962547	962597	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2963	.	NC_007793	962698	962704	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2964	.	NC_007793	965396	965452	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2965	.	NC_007793	966371	966425	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2966	.	NC_007793	966544	966702	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2967	.	NC_007793	966931	966980	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2968	.	NC_007793	967336	967404	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=4
MC	2969	.	NC_007793	967505	967535	0	0	left_inside_cov=0	left_outside_cov=5	right_inside_cov=0	right_outside_cov=1
MC	2970	.	NC_007793	970686	970712	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2971	.	NC_007793	974087	974181	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2972	.	NC_007793	974973	974988	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2973	.	NC_007793	977525	977526	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2974	.	NC_007793	979842	979950	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2975	.	NC_007793	980059	980127	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2976	.	NC_007793	980226	980266	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2977	.	NC_007793	980606	980641	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2978	.	NC_007793	980765	980801	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2979	.	NC_007793	981658	981719	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2980	.	NC_007793	981844	981857	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2981	.	NC_007793	982059	982170	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2982	.	NC_007793	982355	982398	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	2983	.	NC_007793	982491	982503	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2984	.	NC_007793	984862	984875	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2985	.	NC_007793	985660	985671	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2986	.	NC_007793	989401	989415	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2987	.	NC_007793	991833	991861	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2988	.	NC_007793	1001014	1001059	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	2989	.	NC_007793	1008413	1008431	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2990	.	NC_007793	1013057	1013077	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2991	.	NC_007793	1016964	1016968	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	2992	.	NC_007793	1018635	1018713	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2993	.	NC_007793	1019100	1019133	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2994	.	NC_007793	1019353	1019462	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2995	.	NC_007793	1019616	1019799	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2996	.	NC_007793	1020065	1020115	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	2997	.	NC_007793	1022991	1023027	0	0	left_inside_cov=0	left_outside_cov=3	right_inside_cov=0	right_outside_cov=1
MC	2998	.	NC_007793	1023806	1023810	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	2999	.	NC_007793	1023941	1024014	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3000	.	NC_007793	1024251	1024293	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3001	.	NC_007793	1024716	1024789	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3002	.	NC_007793	1025033	1025034	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3003	.	NC_007793	1025203	1025286	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3004	.	NC_007793	1025834	1025892	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3005	.	NC_007793	1025992	1026052	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3006	.	NC_007793	1026383	1026434	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3007	.	NC_007793	1026788	1026867	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3008	.	NC_007793	1029429	1029441	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3009	.	NC_007793	1029833	1029838	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3010	.	NC_007793	1030709	1030737	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3011	.	NC_007793	1037734	1038000	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3012	.	NC_007793	1038352	1038356	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3013	.	NC_007793	1040771	1040812	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3014	.	NC_007793	1040978	1041009	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3015	.	NC_007793	1042456	1042465	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3016	.	NC_007793	1044088	1044206	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3017	.	NC_007793	1048271	1048277	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3018	.	NC_007793	1050690	1050780	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3019	.	NC_007793	1052354	1052400	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3020	.	NC_007793	1070714	1070751	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3021	.	NC_007793	1073909	1074007	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3022	.	NC_007793	1074257	1074302	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3023	.	NC_007793	1080275	1080316	0	0	left_inside_cov=0	left_outside_cov=11	right_inside_cov=0	right_outside_cov=1
MC	3024	.	NC_007793	1080462	1080477	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3025	.	NC_007793	1108412	1108464	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3026	.	NC_007793	1108596	1108618	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3027	.	NC_007793	1124374	1124382	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3028	.	NC_007793	1148068	1148100	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3029	.	NC_007793	1154217	1154230	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3030	.	NC_007793	1157659	1157791	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3031	.	NC_007793	1158367	1158415	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3032	.	NC_007793	1158516	1158576	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3033	.	NC_007793	1159711	1159740	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3034	.	NC_007793	1161313	1161419	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3035	.	NC_007793	1162720	1162784	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3036	.	NC_007793	1162885	1162892	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3037	.	NC_007793	1169548	1169624	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3038	.	NC_007793	1171886	1172022	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=10
MC	3039	.	NC_007793	1191027	1191130	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3040	.	NC_007793	1191324	1191337	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3041	.	NC_007793	1211608	1211653	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3042	.	NC_007793	1212935	1213036	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3043	.	NC_007793	1225618	1225653	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3044	.	NC_007793	1241901	1241934	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3045	.	NC_007793	1244817	1244952	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3046	.	NC_007793	1248933	1249177	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3047	.	NC_007793	1251558	1251594	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3048	.	NC_007793	1251743	1251746	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3049	.	NC_007793	1252654	1252665	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3050	.	NC_007793	1266075	1266077	0	0	left_inside_cov=0	left_outside_cov=3	right_inside_cov=0	right_outside_cov=92
MC	3051	.	NC_007793	1299262	1299264	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3052	.	NC_007793	1299358	1299400	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=3
MC	3053	.	NC_007793	1306430	1306457	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3054	.	NC_007793	1312828	1312872	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3055	.	NC_007793	1316650	1316686	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3056	.	NC_007793	1324956	1324977	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3057	.	NC_007793	1325382	1325383	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3058	.	NC_007793	1329130	1329139	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3059	.	NC_007793	1329730	1329772	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3060	.	NC_007793	1329957	1330018	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3061	.	NC_007793	1333340	1333372	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3062	.	NC_007793	1335427	1335487	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3063	.	NC_007793	1335619	1335668	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3064	.	NC_007793	1336109	1336126	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3065	.	NC_007793	1336560	1336573	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3066	.	NC_007793	1337272	1337281	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3067	.	NC_007793	1341928	1341937	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3068	.	NC_007793	1342795	1342799	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3069	.	NC_007793	1342965	1342971	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=2
MC	3070	.	NC_007793	1356093	1356115	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3071	.	NC_007793	1363973	1363999	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=4
MC	3072	.	NC_007793	1366541	1366725	117	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3073	.	NC_007793	1366828	1366868	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3074	.	NC_007793	1367077	1367087	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=3
MC	3075	.	NC_007793	1381035	1381082	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3076	.	NC_007793	1383996	1384006	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3077	.	NC_007793	1386528	1386584	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3078	.	NC_007793	1387606	1387607	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3079	.	NC_007793	1390373	1390461	0	0	left_inside_cov=0	left_outside_cov=5	right_inside_cov=0	right_outside_cov=1
MC	3080	.	NC_007793	1392469	1392477	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3081	.	NC_007793	1393414	1393492	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3082	.	NC_007793	1393908	1394118	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3083	.	NC_007793	1394384	1394571	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3084	.	NC_007793	1394860	1395000	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3085	.	NC_007793	1395100	1395110	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3086	.	NC_007793	1400119	1400221	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3087	.	NC_007793	1407657	1407707	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3088	.	NC_007793	1407865	1407869	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3089	.	NC_007793	1409050	1409086	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3090	.	NC_007793	1409923	1410110	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3091	.	NC_007793	1410248	1410249	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3092	.	NC_007793	1411122	1411228	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3093	.	NC_007793	1411328	1411352	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3094	.	NC_007793	1411587	1411624	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3095	.	NC_007793	1411978	1412015	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3096	.	NC_007793	1412342	1412807	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3097	.	NC_007793	1412931	1413040	0	93	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3098	.	NC_007793	1413180	1413233	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3099	.	NC_007793	1414287	1414308	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=3
MC	3100	.	NC_007793	1416409	1416427	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3101	.	NC_007793	1417074	1417098	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3102	.	NC_007793	1417799	1417838	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3103	.	NC_007793	1425078	1425128	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3104	.	NC_007793	1435495	1435513	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3105	.	NC_007793	1435802	1435810	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3106	.	NC_007793	1440203	1440231	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3107	.	NC_007793	1442642	1442684	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3108	.	NC_007793	1442785	1442870	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3109	.	NC_007793	1446299	1446354	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=3
MC	3110	.	NC_007793	1454969	1454981	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3111	.	NC_007793	1456254	1456284	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3112	.	NC_007793	1456692	1456716	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3113	.	NC_007793	1456817	1456839	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3114	.	NC_007793	1464070	1473110	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3115	.	NC_007793	1474706	1474732	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3116	.	NC_007793	1475149	1475163	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3117	.	NC_007793	1475453	1475477	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3118	.	NC_007793	1477239	1477255	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3119	.	NC_007793	1477809	1477820	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3120	.	NC_007793	1477935	1477944	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3121	.	NC_007793	1478573	1478583	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3122	.	NC_007793	1479955	1479959	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3123	.	NC_007793	1480487	1480489	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3124	.	NC_007793	1480736	1480795	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3125	.	NC_007793	1481169	1481226	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3126	.	NC_007793	1481569	1481610	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=3
MC	3127	.	NC_007793	1482077	1482088	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3128	.	NC_007793	1482551	1482567	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3129	.	NC_007793	1482736	1482814	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3130	.	NC_007793	1483018	1483039	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3131	.	NC_007793	1484006	1484013	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3132	.	NC_007793	1485366	1485367	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3133	.	NC_007793	1485573	1485596	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3134	.	NC_007793	1486057	1486073	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3135	.	NC_007793	1486308	1486316	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3136	.	NC_007793	1486571	1486610	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3137	.	NC_007793	1486752	1486931	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3138	.	NC_007793	1487211	1487246	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3139	.	NC_007793	1487412	1487446	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3140	.	NC_007793	1487738	1487804	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3141	.	NC_007793	1487944	1488073	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3142	.	NC_007793	1488388	1488445	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3143	.	NC_007793	1493705	1494061	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3144	.	NC_007793	1498575	1498576	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3145	.	NC_007793	1503993	1504029	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3146	.	NC_007793	1504130	1504179	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3147	.	NC_007793	1518036	1518117	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3148	.	NC_007793	1525300	1525553	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3149	.	NC_007793	1528682	1528753	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3150	.	NC_007793	1528926	1528940	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3151	.	NC_007793	1533497	1533504	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3152	.	NC_007793	1533715	1533785	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3153	.	NC_007793	1535595	1535608	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3154	.	NC_007793	1545902	1548680	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3155	.	NC_007793	1548771	1578117	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3156	.	NC_007793	1579125	1579140	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3157	.	NC_007793	1580061	1580062	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3158	.	NC_007793	1580162	1580210	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3159	.	NC_007793	1580427	1580547	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3160	.	NC_007793	1580877	1586477	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3161	.	NC_007793	1586677	1589821	0	0	left_inside_cov=0	left_outside_cov=3	right_inside_cov=0	right_outside_cov=2
MC	3162	.	NC_007793	1590693	1592021	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=2
MC	3163	.	NC_007793	1594979	1594986	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3164	.	NC_007793	1595103	1595131	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3165	.	NC_007793	1603505	1603506	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3166	.	NC_007793	1612441	1612445	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3167	.	NC_007793	1632107	1632317	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=7
MC	3168	.	NC_007793	1632661	1632726	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3169	.	NC_007793	1633208	1633209	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3170	.	NC_007793	1633588	1633600	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3171	.	NC_007793	1634103	1634122	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3172	.	NC_007793	1634713	1634759	0	0	left_inside_cov=0	left_outside_cov=3	right_inside_cov=0	right_outside_cov=1
MC	3173	.	NC_007793	1634980	1634990	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3174	.	NC_007793	1635155	1635209	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=5
MC	3175	.	NC_007793	1635478	1635800	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3176	.	NC_007793	1635901	1635928	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3177	.	NC_007793	1636361	1636428	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3178	.	NC_007793	1636777	1636786	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3179	.	NC_007793	1636980	1636988	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3180	.	NC_007793	1637081	1637108	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3181	.	NC_007793	1637230	1637478	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3182	.	NC_007793	1639368	1639372	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3183	.	NC_007793	1639776	1639846	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3184	.	NC_007793	1641072	1641089	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3185	.	NC_007793	1641213	1641221	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3186	.	NC_007793	1641331	1641362	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3187	.	NC_007793	1641554	1641634	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3188	.	NC_007793	1642508	1642556	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3189	.	NC_007793	1642836	1642900	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3190	.	NC_007793	1643134	1643165	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3191	.	NC_007793	1643499	1643533	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3192	.	NC_007793	1643887	1644111	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3193	.	NC_007793	1654326	1654366	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3194	.	NC_007793	1654467	1654473	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3195	.	NC_007793	1654664	1654672	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3196	.	NC_007793	1655015	1655068	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3197	.	NC_007793	1655587	1655644	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3198	.	NC_007793	1663845	1663885	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3199	.	NC_007793	1664638	1664660	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=4
MC	3200	.	NC_007793	1677765	1677775	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3201	.	NC_007793	1681863	1681934	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3202	.	NC_007793	1708125	1708132	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3203	.	NC_007793	1711027	1711134	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3204	.	NC_007793	1711235	1711238	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3205	.	NC_007793	1712946	1712985	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3206	.	NC_007793	1713416	1713435	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3207	.	NC_007793	1713994	1714004	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3208	.	NC_007793	1714384	1714386	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3209	.	NC_007793	1714646	1714647	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3210	.	NC_007793	1715398	1715479	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3211	.	NC_007793	1732380	1732431	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3212	.	NC_007793	1746491	1746560	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3213	.	NC_007793	1759725	1759758	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3214	.	NC_007793	1787807	1787835	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3215	.	NC_007793	1793489	1793490	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3216	.	NC_007793	1795495	1795513	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3217	.	NC_007793	1800919	1800944	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3218	.	NC_007793	1802503	1802586	66	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3219	.	NC_007793	1802807	1802933	0	85	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3220	.	NC_007793	1803992	1804068	76	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3221	.	NC_007793	1804225	1804420	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3222	.	NC_007793	1804705	1804708	0	0	left_inside_cov=0	left_outside_cov=5	right_inside_cov=0	right_outside_cov=1
MC	3223	.	NC_007793	1811330	1811346	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3224	.	NC_007793	1817301	1817349	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3225	.	NC_007793	1817993	1818045	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3226	.	NC_007793	1818920	1818930	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3227	.	NC_007793	1822137	1822197	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3228	.	NC_007793	1822292	1822292	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3229	.	NC_007793	1831994	1832054	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3230	.	NC_007793	1836296	1836379	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3231	.	NC_007793	1841404	1841431	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3232	.	NC_007793	1844058	1844095	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3233	.	NC_007793	1846922	1847014	0	0	left_inside_cov=0	left_outside_cov=106	right_inside_cov=0	right_outside_cov=1
MC	3234	.	NC_007793	1847106	1847134	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3235	.	NC_007793	1848975	1849232	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3236	.	NC_007793	1851814	1851841	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3237	.	NC_007793	1852890	1852924	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3238	.	NC_007793	1854278	1854348	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3239	.	NC_007793	1854448	1854553	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3240	.	NC_007793	1866937	1866952	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3241	.	NC_007793	1868151	1868231	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3242	.	NC_007793	1877882	1877914	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3243	.	NC_007793	1878421	1878430	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3244	.	NC_007793	1879871	1879892	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3245	.	NC_007793	1880317	1880355	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3246	.	NC_007793	1880814	1882194	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=3
MC	3247	.	NC_007793	1883175	1883184	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3248	.	NC_007793	1883383	1883413	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3249	.	NC_007793	1883792	1883813	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3250	.	NC_007793	1884493	1884746	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3251	.	NC_007793	1891587	1891841	0	67	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3252	.	NC_007793	1892612	1892691	57	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3253	.	NC_007793	1900576	1900591	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3254	.	NC_007793	1900692	1900760	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=3
MC	3255	.	NC_007793	1903012	1903040	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3256	.	NC_007793	1909701	1909837	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3257	.	NC_007793	1910120	1910254	0	123	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3258	.	NC_007793	1911274	1911479	62	45	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3259	.	NC_007793	1911628	1911726	0	87	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3260	.	NC_007793	1912671	1912714	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3261	.	NC_007793	1922085	1922113	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3262	.	NC_007793	1922735	1922829	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3263	.	NC_007793	1925874	1925884	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3264	.	NC_007793	1927443	1927484	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3265	.	NC_007793	1929255	1929311	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3266	.	NC_007793	1934368	1934372	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3267	.	NC_007793	1938518	1938521	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3268	.	NC_007793	1939879	1939887	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3269	.	NC_007793	1941549	1941554	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3270	.	NC_007793	1943735	1943783	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3271	.	NC_007793	1944170	1944179	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3272	.	NC_007793	1944346	1944625	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3273	.	NC_007793	1945439	1945469	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3274	.	NC_007793	1946333	1946346	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3275	.	NC_007793	1946800	1946831	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3276	.	NC_007793	1949208	1949218	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3277	.	NC_007793	1949324	1949421	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3278	.	NC_007793	1949522	1949586	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3279	.	NC_007793	1949894	1949956	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3280	.	NC_007793	1950057	1950084	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3281	.	NC_007793	1950199	1950216	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3282	.	NC_007793	1950754	1950822	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3283	.	NC_007793	1950942	1950963	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3284	.	NC_007793	1952007	1952007	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3285	.	NC_007793	1952451	1952483	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3286	.	NC_007793	1952921	1953041	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3287	.	NC_007793	1954477	1954505	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=3
MC	3288	.	NC_007793	1954813	1954872	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3289	.	NC_007793	1954973	1955011	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3290	.	NC_007793	1955226	1955259	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3291	.	NC_007793	1955619	1955626	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3292	.	NC_007793	1956005	1956079	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3293	.	NC_007793	1956207	1956336	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3294	.	NC_007793	1956588	1956627	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3295	.	NC_007793	1956805	1956808	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3296	.	NC_007793	1956909	1956985	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3297	.	NC_007793	1957083	1957237	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3298	.	NC_007793	1957341	1957779	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3299	.	NC_007793	1971371	1971397	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3300	.	NC_007793	1972590	1972613	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3301	.	NC_007793	1977964	1977976	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3302	.	NC_007793	1978201	1978202	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3303	.	NC_007793	1985732	1985732	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3304	.	NC_007793	1986474	1986503	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3305	.	NC_007793	1986736	1986870	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3306	.	NC_007793	1989528	1989595	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3307	.	NC_007793	1991971	1992052	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3308	.	NC_007793	1995018	1995030	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=4
MC	3309	.	NC_007793	1997595	1999029	0	1433	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3310	.	NC_007793	2003011	2003083	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3311	.	NC_007793	2003314	2003323	0	0	left_inside_cov=0	left_outside_cov=10	right_inside_cov=0	right_outside_cov=1
MC	3312	.	NC_007793	2018447	2018469	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3313	.	NC_007793	2029529	2029557	0	0	left_inside_cov=0	left_outside_cov=22	right_inside_cov=0	right_outside_cov=2
MC	3314	.	NC_007793	2035896	2035918	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3315	.	NC_007793	2040991	2041000	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=3
MC	3316	.	NC_007793	2044323	2044329	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3317	.	NC_007793	2044430	2044455	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3318	.	NC_007793	2054821	2055057	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=5
MC	3319	.	NC_007793	2056753	2056795	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3320	.	NC_007793	2071370	2071391	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=2
MC	3321	.	NC_007793	2079911	2079969	0	0	left_inside_cov=0	left_outside_cov=5	right_inside_cov=0	right_outside_cov=2
MC	3322	.	NC_007793	2080075	2080105	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3323	.	NC_007793	2081802	2081833	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3324	.	NC_007793	2084227	2084245	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=3
MC	3325	.	NC_007793	2085161	2085222	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=23
MC	3326	.	NC_007793	2086649	2087454	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3327	.	NC_007793	2088197	2088245	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3328	.	NC_007793	2090171	2090214	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3329	.	NC_007793	2090525	2090742	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3330	.	NC_007793	2090843	2090847	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3331	.	NC_007793	2090945	2091157	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3332	.	NC_007793	2091406	2092365	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3333	.	NC_007793	2096364	2097110	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3334	.	NC_007793	2097213	2098012	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3335	.	NC_007793	2098674	2098887	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3336	.	NC_007793	2099004	2099149	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3337	.	NC_007793	2099346	2110767	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=3
MC	3338	.	NC_007793	2111255	2111520	12	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3339	.	NC_007793	2111724	2112911	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3340	.	NC_007793	2113017	2113216	0	0	left_inside_cov=0	left_outside_cov=4	right_inside_cov=0	right_outside_cov=5
MC	3341	.	NC_007793	2113358	2113373	0	0	left_inside_cov=0	left_outside_cov=4	right_inside_cov=0	right_outside_cov=3
MC	3342	.	NC_007793	2113616	2113717	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3343	.	NC_007793	2113814	2114052	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3344	.	NC_007793	2114242	2119874	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=10
MC	3345	.	NC_007793	2119992	2120562	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3346	.	NC_007793	2121065	2121477	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3347	.	NC_007793	2121931	2125300	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=5
MC	3348	.	NC_007793	2125682	2126284	0	0	left_inside_cov=0	left_outside_cov=11	right_inside_cov=0	right_outside_cov=1
MC	3349	.	NC_007793	2126385	2126559	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3350	.	NC_007793	2128696	2128712	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3351	.	NC_007793	2136251	2136305	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3352	.	NC_007793	2136584	2136606	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3353	.	NC_007793	2141870	2141959	0	0	left_inside_cov=0	left_outside_cov=3	right_inside_cov=0	right_outside_cov=7
MC	3354	.	NC_007793	2153640	2153862	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3355	.	NC_007793	2154872	2154952	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3356	.	NC_007793	2155052	2155070	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3357	.	NC_007793	2155171	2155182	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=2
MC	3358	.	NC_007793	2156687	2156771	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3359	.	NC_007793	2159787	2159811	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3360	.	NC_007793	2164752	2164855	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3361	.	NC_007793	2165047	2165110	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3362	.	NC_007793	2165367	2165419	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3363	.	NC_007793	2165520	2165534	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3364	.	NC_007793	2165748	2165761	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3365	.	NC_007793	2165862	2165882	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3366	.	NC_007793	2166029	2166122	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3367	.	NC_007793	2166440	2166440	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3368	.	NC_007793	2167611	2167689	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3369	.	NC_007793	2167991	2168087	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3370	.	NC_007793	2168319	2168342	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3371	.	NC_007793	2168497	2168531	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3372	.	NC_007793	2169201	2169209	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3373	.	NC_007793	2169697	2169704	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3374	.	NC_007793	2170005	2170108	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3375	.	NC_007793	2170209	2170269	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3376	.	NC_007793	2171543	2171549	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3377	.	NC_007793	2172845	2172846	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3378	.	NC_007793	2174124	2174187	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3379	.	NC_007793	2174570	2174581	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3380	.	NC_007793	2174682	2174709	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3381	.	NC_007793	2174810	2174827	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3382	.	NC_007793	2175796	2175799	0	0	left_inside_cov=0	left_outside_cov=3	right_inside_cov=0	right_outside_cov=1
MC	3383	.	NC_007793	2175890	2175929	34	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3384	.	NC_007793	2176030	2178932	2902	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3385	.	NC_007793	2179116	2180756	190	1410	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3386	.	NC_007793	2181187	2181205	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3387	.	NC_007793	2181561	2181581	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3388	.	NC_007793	2181765	2181790	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3389	.	NC_007793	2184811	2184821	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3390	.	NC_007793	2193776	2193781	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3391	.	NC_007793	2194830	2194837	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3392	.	NC_007793	2195580	2195703	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3393	.	NC_007793	2195813	2195854	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3394	.	NC_007793	2196600	2196683	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3395	.	NC_007793	2196784	2197036	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3396	.	NC_007793	2197434	2197436	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3397	.	NC_007793	2197579	2197586	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3398	.	NC_007793	2197850	2197861	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3399	.	NC_007793	2199635	2199725	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3400	.	NC_007793	2207324	2207384	0	0	left_inside_cov=0	left_outside_cov=5	right_inside_cov=0	right_outside_cov=1
MC	3401	.	NC_007793	2212327	2212353	0	0	left_inside_cov=0	left_outside_cov=3	right_inside_cov=0	right_outside_cov=1
MC	3402	.	NC_007793	2215222	2215234	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3403	.	NC_007793	2215564	2215590	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3404	.	NC_007793	2216555	2216573	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3405	.	NC_007793	2216675	2216681	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3406	.	NC_007793	2237576	2237580	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3407	.	NC_007793	2247809	2247845	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3408	.	NC_007793	2248645	2248656	0	0	left_inside_cov=0	left_outside_cov=8	right_inside_cov=0	right_outside_cov=1
MC	3409	.	NC_007793	2248869	2248924	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3410	.	NC_007793	2255152	2255207	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3411	.	NC_007793	2256013	2256025	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3412	.	NC_007793	2261278	2261301	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3413	.	NC_007793	2264768	2264780	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3414	.	NC_007793	2268156	2268200	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=2
MC	3415	.	NC_007793	2274796	2274828	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3416	.	NC_007793	2275006	2275011	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3417	.	NC_007793	2278072	2278080	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3418	.	NC_007793	2280126	2280147	0	0	left_inside_cov=0	left_outside_cov=6	right_inside_cov=0	right_outside_cov=1
MC	3419	.	NC_007793	2282264	2282323	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3420	.	NC_007793	2283818	2283819	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3421	.	NC_007793	2284201	2284207	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3422	.	NC_007793	2284493	2284498	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3423	.	NC_007793	2284924	2284968	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3424	.	NC_007793	2285568	2285741	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3425	.	NC_007793	2285842	2285867	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3426	.	NC_007793	2289117	2289134	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3427	.	NC_007793	2289332	2289355	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3428	.	NC_007793	2291861	2291865	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3429	.	NC_007793	2295957	2297539	1582	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3430	.	NC_007793	2299219	2299220	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3431	.	NC_007793	2305668	2305672	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3432	.	NC_007793	2306053	2306097	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3433	.	NC_007793	2317355	2317450	0	77	left_inside_cov=0	left_outside_cov=13	right_inside_cov=0	right_outside_cov=1
MC	3434	.	NC_007793	2317694	2317704	10	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3435	.	NC_007793	2318307	2318308	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=3
MC	3436	.	NC_007793	2318837	2319017	63	43	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3437	.	NC_007793	2319118	2319258	47	79	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3438	.	NC_007793	2322446	2322510	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3439	.	NC_007793	2322694	2322696	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3440	.	NC_007793	2326132	2326148	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3441	.	NC_007793	2326265	2326294	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3442	.	NC_007793	2327275	2327331	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3443	.	NC_007793	2328359	2328509	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3444	.	NC_007793	2328713	2328756	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3445	.	NC_007793	2328862	2328879	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3446	.	NC_007793	2329163	2329168	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3447	.	NC_007793	2329325	2329502	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3448	.	NC_007793	2330021	2330123	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3449	.	NC_007793	2330371	2330380	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3450	.	NC_007793	2332080	2332086	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3451	.	NC_007793	2332190	2332244	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3452	.	NC_007793	2332822	2332851	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3453	.	NC_007793	2332952	2333044	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3454	.	NC_007793	2333985	2334082	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3455	.	NC_007793	2334884	2334893	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3456	.	NC_007793	2337743	2337845	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3457	.	NC_007793	2337946	2338066	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3458	.	NC_007793	2342342	2342351	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3459	.	NC_007793	2343379	2343580	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3460	.	NC_007793	2346348	2346366	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3461	.	NC_007793	2378272	2378357	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3462	.	NC_007793	2386900	2386902	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3463	.	NC_007793	2387947	2387955	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3464	.	NC_007793	2388147	2388153	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3465	.	NC_007793	2398842	2398933	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3466	.	NC_007793	2404206	2404354	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3467	.	NC_007793	2404683	2404688	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3468	.	NC_007793	2405426	2405432	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3469	.	NC_007793	2406397	2406536	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3470	.	NC_007793	2406989	2407058	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3471	.	NC_007793	2407159	2407279	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3472	.	NC_007793	2410534	2410564	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3473	.	NC_007793	2420760	2420762	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3474	.	NC_007793	2428435	2428451	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3475	.	NC_007793	2431540	2431631	0	86	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3476	.	NC_007793	2433186	2433197	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3477	.	NC_007793	2442682	2442711	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3478	.	NC_007793	2447078	2447128	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3479	.	NC_007793	2448224	2448405	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3480	.	NC_007793	2449907	2449915	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3481	.	NC_007793	2450009	2450010	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3482	.	NC_007793	2452382	2452414	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3483	.	NC_007793	2452977	2453004	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3484	.	NC_007793	2458896	2458985	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3485	.	NC_007793	2461277	2461299	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3486	.	NC_007793	2463071	2463292	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3487	.	NC_007793	2473198	2473211	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3488	.	NC_007793	2478920	2478941	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3489	.	NC_007793	2480021	2480036	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3490	.	NC_007793	2480251	2480321	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3491	.	NC_007793	2480638	2480652	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3492	.	NC_007793	2483974	2484039	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3493	.	NC_007793	2490098	2490106	0	0	left_inside_cov=0	left_outside_cov=20	right_inside_cov=0	right_outside_cov=3
MC	3494	.	NC_007793	2492302	2492315	0	0	left_inside_cov=0	left_outside_cov=5	right_inside_cov=0	right_outside_cov=1
MC	3495	.	NC_007793	2493952	2494034	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3496	.	NC_007793	2494635	2494757	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3497	.	NC_007793	2495993	2496037	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=3
MC	3498	.	NC_007793	2498784	2498793	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3499	.	NC_007793	2508311	2508371	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3500	.	NC_007793	2508866	2508895	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3501	.	NC_007793	2509614	2509657	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3502	.	NC_007793	2509765	2509791	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3503	.	NC_007793	2510979	2511005	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3504	.	NC_007793	2511687	2511760	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3505	.	NC_007793	2515198	2515248	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3506	.	NC_007793	2518576	2518586	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3507	.	NC_007793	2518926	2519049	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3508	.	NC_007793	2519149	2519224	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3509	.	NC_007793	2519676	2519704	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3510	.	NC_007793	2519881	2519885	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3511	.	NC_007793	2520232	2520274	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3512	.	NC_007793	2520563	2520672	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3513	.	NC_007793	2522883	2522928	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3514	.	NC_007793	2524156	2524186	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3515	.	NC_007793	2524481	2524495	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3516	.	NC_007793	2524859	2524871	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3517	.	NC_007793	2525382	2525454	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3518	.	NC_007793	2526259	2526263	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3519	.	NC_007793	2529935	2530051	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=6
MC	3520	.	NC_007793	2530781	2530822	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3521	.	NC_007793	2540224	2540235	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3522	.	NC_007793	2543195	2543199	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3523	.	NC_007793	2543471	2543479	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3524	.	NC_007793	2543593	2543604	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3525	.	NC_007793	2544724	2544770	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3526	.	NC_007793	2545249	2545251	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3527	.	NC_007793	2545569	2545582	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3528	.	NC_007793	2547384	2547397	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3529	.	NC_007793	2548474	2548510	0	0	left_inside_cov=0	left_outside_cov=4	right_inside_cov=0	right_outside_cov=1
MC	3530	.	NC_007793	2548894	2548955	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3531	.	NC_007793	2550006	2550036	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3532	.	NC_007793	2550181	2550191	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3533	.	NC_007793	2550302	2550349	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3534	.	NC_007793	2550618	2550875	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3535	.	NC_007793	2551107	2551143	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3536	.	NC_007793	2554427	2554437	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3537	.	NC_007793	2555011	2555170	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3538	.	NC_007793	2555285	2555311	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3539	.	NC_007793	2555410	2555496	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3540	.	NC_007793	2558258	2558298	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3541	.	NC_007793	2561923	2561934	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3542	.	NC_007793	2563477	2563509	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3543	.	NC_007793	2563672	2563708	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3544	.	NC_007793	2565780	2565931	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3545	.	NC_007793	2569509	2569547	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3546	.	NC_007793	2573458	2573499	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3547	.	NC_007793	2575767	2575779	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3548	.	NC_007793	2580219	2580393	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3549	.	NC_007793	2600946	2601011	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3550	.	NC_007793	2601308	2601320	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=13
MC	3551	.	NC_007793	2603295	2603397	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3552	.	NC_007793	2609227	2609235	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3553	.	NC_007793	2622717	2622825	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3554	.	NC_007793	2626490	2626521	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3555	.	NC_007793	2626652	2626668	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3556	.	NC_007793	2627006	2627217	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3557	.	NC_007793	2627566	2627619	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3558	.	NC_007793	2629134	2629138	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3559	.	NC_007793	2632177	2632517	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3560	.	NC_007793	2635925	2635976	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3561	.	NC_007793	2636077	2636334	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3562	.	NC_007793	2644541	2644579	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3563	.	NC_007793	2644680	2644682	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3564	.	NC_007793	2644783	2644849	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3565	.	NC_007793	2647355	2647383	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3566	.	NC_007793	2647665	2647715	0	0	left_inside_cov=0	left_outside_cov=3	right_inside_cov=0	right_outside_cov=1
MC	3567	.	NC_007793	2649177	2649201	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3568	.	NC_007793	2649381	2649391	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3569	.	NC_007793	2650948	2651083	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3570	.	NC_007793	2651214	2651224	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3571	.	NC_007793	2653301	2653310	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3572	.	NC_007793	2654731	2654741	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3573	.	NC_007793	2655853	2655901	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3574	.	NC_007793	2656330	2656348	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3575	.	NC_007793	2659186	2659317	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3576	.	NC_007793	2661616	2661671	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3577	.	NC_007793	2662012	2662051	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3578	.	NC_007793	2665275	2665340	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3579	.	NC_007793	2668490	2668492	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3580	.	NC_007793	2671979	2672000	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3581	.	NC_007793	2672120	2672182	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3582	.	NC_007793	2674475	2674475	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3583	.	NC_007793	2677406	2677408	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3584	.	NC_007793	2677557	2677589	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3585	.	NC_007793	2677682	2677694	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3586	.	NC_007793	2679122	2679131	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3587	.	NC_007793	2679781	2679930	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3588	.	NC_007793	2681159	2681172	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3589	.	NC_007793	2681272	2681297	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3590	.	NC_007793	2687338	2687402	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3591	.	NC_007793	2688977	2688981	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3592	.	NC_007793	2689341	2689343	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3593	.	NC_007793	2689444	2689453	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3594	.	NC_007793	2689700	2689768	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3595	.	NC_007793	2689869	2689979	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3596	.	NC_007793	2693232	2693306	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3597	.	NC_007793	2696053	2696074	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3598	.	NC_007793	2696410	2696429	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3599	.	NC_007793	2702010	2702083	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3600	.	NC_007793	2707337	2707382	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3601	.	NC_007793	2707800	2707854	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3602	.	NC_007793	2713068	2713143	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3603	.	NC_007793	2726574	2726706	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3604	.	NC_007793	2729432	2729449	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3605	.	NC_007793	2733573	2733651	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3606	.	NC_007793	2738992	2739003	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3607	.	NC_007793	2739096	2739096	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3608	.	NC_007793	2739197	2739197	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3609	.	NC_007793	2740063	2740116	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3610	.	NC_007793	2740763	2740807	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3611	.	NC_007793	2741689	2741691	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3612	.	NC_007793	2742279	2742318	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3613	.	NC_007793	2742644	2742738	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3614	.	NC_007793	2743992	2744070	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3615	.	NC_007793	2752783	2752909	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3616	.	NC_007793	2754651	2754701	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3617	.	NC_007793	2756524	2756545	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3618	.	NC_007793	2756668	2756795	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3619	.	NC_007793	2764212	2764281	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3620	.	NC_007793	2764615	2764621	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3621	.	NC_007793	2765443	2765445	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3622	.	NC_007793	2765544	2765592	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3623	.	NC_007793	2765693	2765751	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3624	.	NC_007793	2765852	2765874	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3625	.	NC_007793	2766073	2766202	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3626	.	NC_007793	2771844	2771928	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3627	.	NC_007793	2774254	2774257	0	0	left_inside_cov=0	left_outside_cov=12	right_inside_cov=0	right_outside_cov=1
MC	3628	.	NC_007793	2777074	2777138	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3629	.	NC_007793	2779547	2779616	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3630	.	NC_007793	2781397	2781414	0	0	left_inside_cov=0	left_outside_cov=3	right_inside_cov=0	right_outside_cov=1
MC	3631	.	NC_007793	2783016	2783143	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3632	.	NC_007793	2783244	2783251	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3633	.	NC_007793	2783430	2783462	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3634	.	NC_007793	2783802	2783981	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3635	.	NC_007793	2787370	2787394	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3636	.	NC_007793	2788540	2788557	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3637	.	NC_007793	2789185	2789190	0	0	left_inside_cov=0	left_outside_cov=3	right_inside_cov=0	right_outside_cov=3
MC	3638	.	NC_007793	2808557	2808632	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3639	.	NC_007793	2809045	2809170	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3640	.	NC_007793	2810162	2810204	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3641	.	NC_007793	2810479	2810484	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3642	.	NC_007793	2810636	2810643	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3643	.	NC_007793	2810881	2810936	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3644	.	NC_007793	2811258	2811345	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3645	.	NC_007793	2812754	2812825	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3646	.	NC_007793	2813013	2813311	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3647	.	NC_007793	2813547	2813580	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3648	.	NC_007793	2815191	2815239	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3649	.	NC_007793	2816887	2816896	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3650	.	NC_007793	2818585	2818671	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3651	.	NC_007793	2822922	2822995	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3652	.	NC_007793	2824829	2825005	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3653	.	NC_007793	2825397	2825411	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3654	.	NC_007793	2825528	2825528	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3655	.	NC_007793	2826579	2826660	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3656	.	NC_007793	2826865	2826933	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=3
MC	3657	.	NC_007793	2827034	2827071	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3658	.	NC_007793	2827496	2827543	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3659	.	NC_007793	2828431	2828517	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=2
MC	3660	.	NC_007793	2829163	2829172	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3661	.	NC_007793	2830055	2830060	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3662	.	NC_007793	2830339	2830363	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3663	.	NC_007793	2832111	2832172	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3664	.	NC_007793	2832619	2832641	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3665	.	NC_007793	2832742	2832757	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3666	.	NC_007793	2832888	2832946	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3667	.	NC_007793	2846610	2846697	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3668	.	NC_007793	2846798	2846840	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3669	.	NC_007793	2852460	2852495	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3670	.	NC_007793	2854178	2854240	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3671	.	NC_007793	2856201	2856233	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3672	.	NC_007793	2860340	2860347	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3673	.	NC_007793	2861599	2861608	0	0	left_inside_cov=0	left_outside_cov=2	right_inside_cov=0	right_outside_cov=1
MC	3674	.	NC_007793	2862321	2862332	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=1
MC	3675	.	NC_007793	2866692	2866854	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=3
MC	3676	.	NC_007793	2872747	2872769	0	0	left_inside_cov=0	left_outside_cov=1	right_inside_cov=0	right_outside_cov=NA
UN	3677	.	NC_007793	1	340
UN	3678	.	NC_007793	3332	3332
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UN	3680	.	NC_007793	3533	3533
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UN	3715	.	NC_007793	12032	12034
UN	3716	.	NC_007793	12041	12173
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UN	3720	.	NC_007793	14151	14151
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UN	3726	.	NC_007793	14328	14341
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UN	3751	.	NC_007793	15486	15606
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UN	3755	.	NC_007793	15991	15991
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UN	3788	.	NC_007793	23898	23898
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UN	3790	.	NC_007793	24226	24226
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UN	3813	.	NC_007793	30952	30952
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UN	3816	.	NC_007793	30959	31001
UN	3817	.	NC_007793	33300	33420
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UN	3826	.	NC_007793	36161	36403
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UN	3828	.	NC_007793	36411	36411
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UN	3831	.	NC_007793	36422	36422
UN	3832	.	NC_007793	36425	36425
UN	3833	.	NC_007793	36428	36596
UN	3834	.	NC_007793	36959	37268
UN	3835	.	NC_007793	37270	37279
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UN	3845	.	NC_007793	37588	37588
UN	3846	.	NC_007793	37593	37752
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UN	3848	.	NC_007793	37766	37766
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UN	3850	.	NC_007793	37771	37771
UN	3851	.	NC_007793	37773	37774
UN	3852	.	NC_007793	39051	39051
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UN	3861	.	NC_007793	41563	41563
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UN	3890	.	NC_007793	44808	44808
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UN	3900	.	NC_007793	45333	45335
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UN	3904	.	NC_007793	45353	45353
UN	3905	.	NC_007793	45355	45691
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UN	3907	.	NC_007793	45696	45696
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UN	3910	.	NC_007793	45810	45823
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UN	3915	.	NC_007793	47070	47070
UN	3916	.	NC_007793	47072	47072
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UN	3919	.	NC_007793	47440	47440
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UN	3925	.	NC_007793	47722	47722
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UN	3945	.	NC_007793	49351	49351
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UN	3955	.	NC_007793	49699	49699
UN	3956	.	NC_007793	49702	49702
UN	3957	.	NC_007793	49777	49777
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UN	3960	.	NC_007793	49872	49872
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UN	3962	.	NC_007793	49877	49877
UN	3963	.	NC_007793	49890	49980
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UN	3965	.	NC_007793	50022	50023
UN	3966	.	NC_007793	50030	50030
UN	3967	.	NC_007793	50032	50088
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UN	5130	.	NC_007793	188670	188670
UN	5131	.	NC_007793	188673	188698
UN	5132	.	NC_007793	188810	188810
UN	5133	.	NC_007793	188818	188834
UN	5134	.	NC_007793	189107	189107
UN	5135	.	NC_007793	189110	189112
UN	5136	.	NC_007793	189118	189118
UN	5137	.	NC_007793	189133	189134
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UN	5139	.	NC_007793	189351	189445
UN	5140	.	NC_007793	189451	189451
UN	5141	.	NC_007793	189459	189459
UN	5142	.	NC_007793	189465	189466
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UN	5144	.	NC_007793	189790	189790
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UN	5149	.	NC_007793	189822	189823
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UN	5153	.	NC_007793	190042	190092
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UN	5159	.	NC_007793	190584	190597
UN	5160	.	NC_007793	190603	190603
UN	5161	.	NC_007793	190610	190779
UN	5162	.	NC_007793	190781	190782
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UN	5164	.	NC_007793	192325	192325
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UN	5166	.	NC_007793	192484	192485
UN	5167	.	NC_007793	192488	192488
UN	5168	.	NC_007793	192491	192491
UN	5169	.	NC_007793	192495	192497
UN	5170	.	NC_007793	192531	192678
UN	5171	.	NC_007793	192685	192685
UN	5172	.	NC_007793	193313	193313
UN	5173	.	NC_007793	193315	193325
UN	5174	.	NC_007793	193333	193333
UN	5175	.	NC_007793	193335	193335
UN	5176	.	NC_007793	193337	193374
UN	5177	.	NC_007793	193381	193381
UN	5178	.	NC_007793	193390	193390
UN	5179	.	NC_007793	193394	193394
UN	5180	.	NC_007793	193558	193876
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UN	5183	.	NC_007793	193972	193975
UN	5184	.	NC_007793	193977	193995
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UN	5188	.	NC_007793	194302	194302
UN	5189	.	NC_007793	194306	194329
UN	5190	.	NC_007793	194332	194332
UN	5191	.	NC_007793	194544	194545
UN	5192	.	NC_007793	194547	194547
UN	5193	.	NC_007793	194550	194642
UN	5194	.	NC_007793	194645	194645
UN	5195	.	NC_007793	194649	194649
UN	5196	.	NC_007793	194682	194682
UN	5197	.	NC_007793	194899	194900
UN	5198	.	NC_007793	194904	194904
UN	5199	.	NC_007793	194908	194908
UN	5200	.	NC_007793	194912	194913
UN	5201	.	NC_007793	194915	194915
UN	5202	.	NC_007793	194917	194917
UN	5203	.	NC_007793	194920	194920
UN	5204	.	NC_007793	194927	194927
UN	5205	.	NC_007793	194930	194931
UN	5206	.	NC_007793	194937	194938
UN	5207	.	NC_007793	194940	194940
UN	5208	.	NC_007793	194942	194942
UN	5209	.	NC_007793	194952	194952
UN	5210	.	NC_007793	194954	195447
UN	5211	.	NC_007793	196000	196000
UN	5212	.	NC_007793	196005	196019
UN	5213	.	NC_007793	196021	196021
UN	5214	.	NC_007793	196159	196307
UN	5215	.	NC_007793	196310	196310
UN	5216	.	NC_007793	196314	196314
UN	5217	.	NC_007793	196318	197731
UN	5218	.	NC_007793	197734	197735
UN	5219	.	NC_007793	197740	197741
UN	5220	.	NC_007793	197746	197746
UN	5221	.	NC_007793	197748	197748
UN	5222	.	NC_007793	197750	197750
UN	5223	.	NC_007793	197752	197754
UN	5224	.	NC_007793	197756	198244
UN	5225	.	NC_007793	198246	198250
UN	5226	.	NC_007793	198257	198261
UN	5227	.	NC_007793	198267	198269
UN	5228	.	NC_007793	198271	198395
UN	5229	.	NC_007793	198409	198409
UN	5230	.	NC_007793	198422	198423
UN	5231	.	NC_007793	198433	198442
UN	5232	.	NC_007793	198445	198445
UN	5233	.	NC_007793	198447	198448
UN	5234	.	NC_007793	198450	198450
UN	5235	.	NC_007793	198461	198461
UN	5236	.	NC_007793	198467	198483
UN	5237	.	NC_007793	198485	198537
UN	5238	.	NC_007793	198539	198572
UN	5239	.	NC_007793	198574	198574
UN	5240	.	NC_007793	198576	198606
UN	5241	.	NC_007793	198611	198612
UN	5242	.	NC_007793	198626	198626
UN	5243	.	NC_007793	198635	198636
UN	5244	.	NC_007793	198638	198639
UN	5245	.	NC_007793	198641	198641
UN	5246	.	NC_007793	198643	198645
UN	5247	.	NC_007793	198647	198647
UN	5248	.	NC_007793	198650	198650
UN	5249	.	NC_007793	198655	198656
UN	5250	.	NC_007793	198694	198694
UN	5251	.	NC_007793	198709	198726
UN	5252	.	NC_007793	198754	198754
UN	5253	.	NC_007793	198758	198759
UN	5254	.	NC_007793	198761	198762
UN	5255	.	NC_007793	198764	198764
UN	5256	.	NC_007793	198768	198769
UN	5257	.	NC_007793	198775	198775
UN	5258	.	NC_007793	198788	198789
UN	5259	.	NC_007793	198793	198936
UN	5260	.	NC_007793	198940	198987
UN	5261	.	NC_007793	198994	198994
UN	5262	.	NC_007793	199004	199004
UN	5263	.	NC_007793	199028	199217
UN	5264	.	NC_007793	199317	199624
UN	5265	.	NC_007793	199638	199638
UN	5266	.	NC_007793	199650	199650
UN	5267	.	NC_007793	199652	199652
UN	5268	.	NC_007793	199656	199656
UN	5269	.	NC_007793	199746	199754
UN	5270	.	NC_007793	199795	199795
UN	5271	.	NC_007793	199799	199806
UN	5272	.	NC_007793	199811	199813
UN	5273	.	NC_007793	199819	199819
UN	5274	.	NC_007793	199823	199823
UN	5275	.	NC_007793	199833	199835
UN	5276	.	NC_007793	199843	200043
UN	5277	.	NC_007793	200452	200452
UN	5278	.	NC_007793	200454	200454
UN	5279	.	NC_007793	200456	200456
UN	5280	.	NC_007793	200458	200458
UN	5281	.	NC_007793	200461	200466
UN	5282	.	NC_007793	200468	200468
UN	5283	.	NC_007793	200470	200471
UN	5284	.	NC_007793	200476	200477
UN	5285	.	NC_007793	200483	200483
UN	5286	.	NC_007793	200487	200487
UN	5287	.	NC_007793	200489	200490
UN	5288	.	NC_007793	200497	200497
UN	5289	.	NC_007793	200546	200546
UN	5290	.	NC_007793	200551	200551
UN	5291	.	NC_007793	200597	200598
UN	5292	.	NC_007793	200601	200796
UN	5293	.	NC_007793	200798	200802
UN	5294	.	NC_007793	200805	200805
UN	5295	.	NC_007793	200827	200828
UN	5296	.	NC_007793	200832	200834
UN	5297	.	NC_007793	200836	200836
UN	5298	.	NC_007793	200840	200840
UN	5299	.	NC_007793	200842	200842
UN	5300	.	NC_007793	201050	201050
UN	5301	.	NC_007793	201057	201059
UN	5302	.	NC_007793	201063	201063
UN	5303	.	NC_007793	201071	201071
UN	5304	.	NC_007793	201080	201081
UN	5305	.	NC_007793	201086	201094
UN	5306	.	NC_007793	201099	201333
UN	5307	.	NC_007793	201354	201354
UN	5308	.	NC_007793	201425	201850
UN	5309	.	NC_007793	201995	201995
UN	5310	.	NC_007793	202599	202599
UN	5311	.	NC_007793	202601	202601
UN	5312	.	NC_007793	203393	203393
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UN	5314	.	NC_007793	203768	203769
UN	5315	.	NC_007793	203774	203777
UN	5316	.	NC_007793	203902	203902
UN	5317	.	NC_007793	204184	204184
UN	5318	.	NC_007793	204296	204385
UN	5319	.	NC_007793	204512	204512
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UN	5321	.	NC_007793	204532	204532
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UN	5323	.	NC_007793	204537	204537
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UN	5325	.	NC_007793	204543	204543
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UN	5327	.	NC_007793	204553	204553
UN	5328	.	NC_007793	204555	204555
UN	5329	.	NC_007793	204559	204559
UN	5330	.	NC_007793	204568	204571
UN	5331	.	NC_007793	204574	204574
UN	5332	.	NC_007793	204584	204584
UN	5333	.	NC_007793	204587	204653
UN	5334	.	NC_007793	204926	204928
UN	5335	.	NC_007793	206679	206826
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UN	5337	.	NC_007793	208842	208842
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UN	5339	.	NC_007793	208857	208857
UN	5340	.	NC_007793	208861	208861
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UN	5343	.	NC_007793	208921	208921
UN	5344	.	NC_007793	208923	208923
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UN	5348	.	NC_007793	211467	211473
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UN	5351	.	NC_007793	211591	211591
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UN	5353	.	NC_007793	211663	211663
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UN	5355	.	NC_007793	211667	211667
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UN	5357	.	NC_007793	211672	211673
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UN	5361	.	NC_007793	211693	211704
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UN	5363	.	NC_007793	211800	211914
UN	5364	.	NC_007793	211931	211931
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UN	5375	.	NC_007793	212567	212567
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UN	5386	.	NC_007793	213450	213541
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UN	5388	.	NC_007793	213551	213551
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UN	5399	.	NC_007793	213750	213753
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UN	5411	.	NC_007793	214311	214312
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UN	5416	.	NC_007793	214333	214334
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UN	5421	.	NC_007793	214452	214452
UN	5422	.	NC_007793	214456	214456
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UN	5520	.	NC_007793	225405	225406
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UN	11713	.	NC_007793	1421370	1421370
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UN	16432	.	NC_007793	2509027	2509037
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UN	16467	.	NC_007793	2510835	2510835
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UN	16477	.	NC_007793	2511459	2511459
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UN	16480	.	NC_007793	2511500	2511767
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UN	16482	.	NC_007793	2511790	2511790
UN	16483	.	NC_007793	2514384	2514384
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UN	16499	.	NC_007793	2514904	2514904
UN	16500	.	NC_007793	2514920	2514921
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UN	16514	.	NC_007793	2515597	2515641
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UN	16516	.	NC_007793	2515990	2515990
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UN	16523	.	NC_007793	2516823	2516824
UN	16524	.	NC_007793	2516835	2516835
UN	16525	.	NC_007793	2516840	2516840
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UN	16527	.	NC_007793	2516898	2516898
UN	16528	.	NC_007793	2516913	2517155
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UN	16535	.	NC_007793	2517726	2517726
UN	16536	.	NC_007793	2517730	2517730
UN	16537	.	NC_007793	2517734	2517734
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UN	16540	.	NC_007793	2517972	2517977
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UN	16542	.	NC_007793	2517990	2517990
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UN	16544	.	NC_007793	2518004	2518004
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UN	16546	.	NC_007793	2519464	2519464
UN	16547	.	NC_007793	2519467	2519467
UN	16548	.	NC_007793	2519469	2519469
UN	16549	.	NC_007793	2519490	2519490
UN	16550	.	NC_007793	2519509	2519509
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UN	16552	.	NC_007793	2519551	2520428
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UN	16556	.	NC_007793	2521011	2521011
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UN	16559	.	NC_007793	2521021	2521070
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UN	16564	.	NC_007793	2521132	2521132
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UN	16566	.	NC_007793	2521201	2521201
UN	16567	.	NC_007793	2521204	2521227
UN	16568	.	NC_007793	2521234	2521234
UN	16569	.	NC_007793	2521241	2521245
UN	16570	.	NC_007793	2521250	2521250
UN	16571	.	NC_007793	2521262	2521262
UN	16572	.	NC_007793	2521522	2521522
UN	16573	.	NC_007793	2521526	2521638
UN	16574	.	NC_007793	2521662	2521662
UN	16575	.	NC_007793	2521665	2521665
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UN	16577	.	NC_007793	2521674	2521674
UN	16578	.	NC_007793	2521677	2521677
UN	16579	.	NC_007793	2521692	2521692
UN	16580	.	NC_007793	2521707	2521707
UN	16581	.	NC_007793	2521915	2521915
UN	16582	.	NC_007793	2521920	2521946
UN	16583	.	NC_007793	2521955	2521955
UN	16584	.	NC_007793	2521957	2521958
UN	16585	.	NC_007793	2521976	2521977
UN	16586	.	NC_007793	2521979	2521982
UN	16587	.	NC_007793	2521989	2521989
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UN	16591	.	NC_007793	2522278	2522278
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UN	16598	.	NC_007793	2522502	2522502
UN	16599	.	NC_007793	2522505	2522505
UN	16600	.	NC_007793	2522509	2522509
UN	16601	.	NC_007793	2522522	2522522
UN	16602	.	NC_007793	2522533	2522633
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UN	16613	.	NC_007793	2522990	2522990
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UN	16620	.	NC_007793	2523019	2523022
UN	16621	.	NC_007793	2523028	2523030
UN	16622	.	NC_007793	2523037	2523037
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UN	16789	.	NC_007793	2542729	2542858
UN	16790	.	NC_007793	2542862	2542889
UN	16791	.	NC_007793	2542891	2542891
UN	16792	.	NC_007793	2542895	2542896
UN	16793	.	NC_007793	2542901	2542909
UN	16794	.	NC_007793	2542952	2543687
UN	16795	.	NC_007793	2543689	2543689
UN	16796	.	NC_007793	2543693	2543693
UN	16797	.	NC_007793	2543707	2543707
UN	16798	.	NC_007793	2543710	2543712
UN	16799	.	NC_007793	2543715	2543716
UN	16800	.	NC_007793	2543719	2543719
UN	16801	.	NC_007793	2543722	2543722
UN	16802	.	NC_007793	2543725	2543725
UN	16803	.	NC_007793	2543727	2543727
UN	16804	.	NC_007793	2543729	2543730
UN	16805	.	NC_007793	2543784	2543784
UN	16806	.	NC_007793	2543788	2543906
UN	16807	.	NC_007793	2543917	2543917
UN	16808	.	NC_007793	2543920	2543920
UN	16809	.	NC_007793	2543923	2543924
UN	16810	.	NC_007793	2543927	2543927
UN	16811	.	NC_007793	2543987	2543987
UN	16812	.	NC_007793	2543993	2543993
UN	16813	.	NC_007793	2544001	2544022
UN	16814	.	NC_007793	2544182	2544184
UN	16815	.	NC_007793	2544186	2544362
UN	16816	.	NC_007793	2544370	2544371
UN	16817	.	NC_007793	2544525	2544609
UN	16818	.	NC_007793	2544619	2544619
UN	16819	.	NC_007793	2544650	2544650
UN	16820	.	NC_007793	2544653	2544654
UN	16821	.	NC_007793	2544659	2544659
UN	16822	.	NC_007793	2544663	2544663
UN	16823	.	NC_007793	2544672	2544672
UN	16824	.	NC_007793	2544674	2544674
UN	16825	.	NC_007793	2544682	2544683
UN	16826	.	NC_007793	2544685	2544687
UN	16827	.	NC_007793	2544689	2544691
UN	16828	.	NC_007793	2544695	2544696
UN	16829	.	NC_007793	2544699	2544998
UN	16830	.	NC_007793	2545234	2545334
UN	16831	.	NC_007793	2545520	2545521
UN	16832	.	NC_007793	2545523	2545794
UN	16833	.	NC_007793	2545807	2545807
UN	16834	.	NC_007793	2545810	2545810
UN	16835	.	NC_007793	2545816	2545816
UN	16836	.	NC_007793	2545818	2545818
UN	16837	.	NC_007793	2545860	2545861
UN	16838	.	NC_007793	2545866	2545866
UN	16839	.	NC_007793	2545868	2545868
UN	16840	.	NC_007793	2545880	2546085
UN	16841	.	NC_007793	2546090	2546090
UN	16842	.	NC_007793	2546099	2546099
UN	16843	.	NC_007793	2546103	2546103
UN	16844	.	NC_007793	2546108	2546153
UN	16845	.	NC_007793	2546182	2546183
UN	16846	.	NC_007793	2546186	2546186
UN	16847	.	NC_007793	2546189	2546189
UN	16848	.	NC_007793	2546300	2546303
UN	16849	.	NC_007793	2546311	2546311
UN	16850	.	NC_007793	2546323	2546324
UN	16851	.	NC_007793	2546326	2546333
UN	16852	.	NC_007793	2546339	2546339
UN	16853	.	NC_007793	2546349	2546398
UN	16854	.	NC_007793	2546401	2546401
UN	16855	.	NC_007793	2546543	2546674
UN	16856	.	NC_007793	2546678	2546678
UN	16857	.	NC_007793	2546681	2546688
UN	16858	.	NC_007793	2546691	2546719
UN	16859	.	NC_007793	2546730	2546730
UN	16860	.	NC_007793	2546749	2546749
UN	16861	.	NC_007793	2546751	2546751
UN	16862	.	NC_007793	2546753	2546753
UN	16863	.	NC_007793	2546759	2546759
UN	16864	.	NC_007793	2546762	2546762
UN	16865	.	NC_007793	2546871	2546871
UN	16866	.	NC_007793	2546876	2546967
UN	16867	.	NC_007793	2547217	2547478
UN	16868	.	NC_007793	2547614	2547614
UN	16869	.	NC_007793	2547618	2547618
UN	16870	.	NC_007793	2547626	2547679
UN	16871	.	NC_007793	2547693	2547693
UN	16872	.	NC_007793	2547704	2547704
UN	16873	.	NC_007793	2547716	2547716
UN	16874	.	NC_007793	2547719	2547719
UN	16875	.	NC_007793	2547817	2547836
UN	16876	.	NC_007793	2547838	2547843
UN	16877	.	NC_007793	2547848	2547858
UN	16878	.	NC_007793	2547862	2547862
UN	16879	.	NC_007793	2547864	2547865
UN	16880	.	NC_007793	2547868	2547868
UN	16881	.	NC_007793	2547871	2547871
UN	16882	.	NC_007793	2547874	2547875
UN	16883	.	NC_007793	2547887	2547887
UN	16884	.	NC_007793	2547959	2547959
UN	16885	.	NC_007793	2547961	2547962
UN	16886	.	NC_007793	2547965	2547965
UN	16887	.	NC_007793	2547967	2547968
UN	16888	.	NC_007793	2547971	2548082
UN	16889	.	NC_007793	2548096	2548096
UN	16890	.	NC_007793	2548139	2548139
UN	16891	.	NC_007793	2548141	2548141
UN	16892	.	NC_007793	2548143	2548143
UN	16893	.	NC_007793	2548146	2548146
UN	16894	.	NC_007793	2548148	2548148
UN	16895	.	NC_007793	2548153	2548153
UN	16896	.	NC_007793	2548155	2548156
UN	16897	.	NC_007793	2548159	2548163
UN	16898	.	NC_007793	2548166	2548166
UN	16899	.	NC_007793	2548168	2548170
UN	16900	.	NC_007793	2548172	2548189
UN	16901	.	NC_007793	2548191	2548197
UN	16902	.	NC_007793	2548203	2548203
UN	16903	.	NC_007793	2548211	2548213
UN	16904	.	NC_007793	2548216	2548216
UN	16905	.	NC_007793	2548276	2548276
UN	16906	.	NC_007793	2548290	2548372
UN	16907	.	NC_007793	2548466	2548466
UN	16908	.	NC_007793	2548470	2548591
UN	16909	.	NC_007793	2548593	2548593
UN	16910	.	NC_007793	2548602	2548602
UN	16911	.	NC_007793	2548610	2548610
UN	16912	.	NC_007793	2548623	2548623
UN	16913	.	NC_007793	2548687	2548705
UN	16914	.	NC_007793	2548726	2548727
UN	16915	.	NC_007793	2548730	2548772
UN	16916	.	NC_007793	2548775	2548776
UN	16917	.	NC_007793	2548802	2549363
UN	16918	.	NC_007793	2549365	2549380
UN	16919	.	NC_007793	2549383	2549385
UN	16920	.	NC_007793	2549389	2549389
UN	16921	.	NC_007793	2549391	2549391
UN	16922	.	NC_007793	2549394	2549396
UN	16923	.	NC_007793	2549401	2549401
UN	16924	.	NC_007793	2549403	2549403
UN	16925	.	NC_007793	2549405	2549407
UN	16926	.	NC_007793	2549409	2549409
UN	16927	.	NC_007793	2549411	2549413
UN	16928	.	NC_007793	2549416	2549417
UN	16929	.	NC_007793	2549419	2549422
UN	16930	.	NC_007793	2549424	2549805
UN	16931	.	NC_007793	2549969	2549969
UN	16932	.	NC_007793	2549971	2549972
UN	16933	.	NC_007793	2549979	2551318
UN	16934	.	NC_007793	2551676	2551676
UN	16935	.	NC_007793	2551804	2551805
UN	16936	.	NC_007793	2551829	2551829
UN	16937	.	NC_007793	2551841	2551843
UN	16938	.	NC_007793	2551850	2551854
UN	16939	.	NC_007793	2551857	2551870
UN	16940	.	NC_007793	2551987	2552026
UN	16941	.	NC_007793	2552307	2552437
UN	16942	.	NC_007793	2552443	2552443
UN	16943	.	NC_007793	2552447	2552448
UN	16944	.	NC_007793	2552472	2552472
UN	16945	.	NC_007793	2552482	2552482
UN	16946	.	NC_007793	2552484	2552484
UN	16947	.	NC_007793	2552491	2552491
UN	16948	.	NC_007793	2552496	2552496
UN	16949	.	NC_007793	2552721	2552721
UN	16950	.	NC_007793	2552724	2552724
UN	16951	.	NC_007793	2552727	2552727
UN	16952	.	NC_007793	2552732	2552738
UN	16953	.	NC_007793	2552742	2552742
UN	16954	.	NC_007793	2552745	2552746
UN	16955	.	NC_007793	2552755	2552755
UN	16956	.	NC_007793	2552766	2552802
UN	16957	.	NC_007793	2552808	2552808
UN	16958	.	NC_007793	2552976	2553065
UN	16959	.	NC_007793	2553098	2553098
UN	16960	.	NC_007793	2553101	2553101
UN	16961	.	NC_007793	2553513	2553513
UN	16962	.	NC_007793	2553572	2553572
UN	16963	.	NC_007793	2553601	2553601
UN	16964	.	NC_007793	2553739	2553739
UN	16965	.	NC_007793	2553756	2553988
UN	16966	.	NC_007793	2553990	2553990
UN	16967	.	NC_007793	2553994	2553994
UN	16968	.	NC_007793	2553996	2553996
UN	16969	.	NC_007793	2554001	2554003
UN	16970	.	NC_007793	2554005	2554005
UN	16971	.	NC_007793	2554020	2554020
UN	16972	.	NC_007793	2554037	2554037
UN	16973	.	NC_007793	2554070	2554070
UN	16974	.	NC_007793	2554073	2554123
UN	16975	.	NC_007793	2554126	2554187
UN	16976	.	NC_007793	2554352	2554352
UN	16977	.	NC_007793	2554385	2554386
UN	16978	.	NC_007793	2554392	2554392
UN	16979	.	NC_007793	2554395	2554499
UN	16980	.	NC_007793	2554536	2554536
UN	16981	.	NC_007793	2554549	2554549
UN	16982	.	NC_007793	2554557	2554588
UN	16983	.	NC_007793	2554609	2554609
UN	16984	.	NC_007793	2554685	2554693
UN	16985	.	NC_007793	2554709	2554771
UN	16986	.	NC_007793	2554785	2554811
UN	16987	.	NC_007793	2554813	2554825
UN	16988	.	NC_007793	2554841	2554841
UN	16989	.	NC_007793	2554890	2554890
UN	16990	.	NC_007793	2554898	2554898
UN	16991	.	NC_007793	2554943	2555749
UN	16992	.	NC_007793	2556095	2556095
UN	16993	.	NC_007793	2556097	2556097
UN	16994	.	NC_007793	2556103	2556103
UN	16995	.	NC_007793	2556139	2556139
UN	16996	.	NC_007793	2556143	2556143
UN	16997	.	NC_007793	2556145	2556146
UN	16998	.	NC_007793	2558248	2558441
UN	16999	.	NC_007793	2559676	2559679
UN	17000	.	NC_007793	2559681	2559778
UN	17001	.	NC_007793	2559785	2559785
UN	17002	.	NC_007793	2559799	2559800
UN	17003	.	NC_007793	2560264	2560272
UN	17004	.	NC_007793	2560274	2560274
UN	17005	.	NC_007793	2560282	2560283
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UN	17007	.	NC_007793	2561018	2561019
UN	17008	.	NC_007793	2561031	2561123
UN	17009	.	NC_007793	2561130	2561130
UN	17010	.	NC_007793	2561136	2561136
UN	17011	.	NC_007793	2561350	2561350
UN	17012	.	NC_007793	2561372	2561372
UN	17013	.	NC_007793	2561379	2561379
UN	17014	.	NC_007793	2561670	2561670
UN	17015	.	NC_007793	2561674	2561674
UN	17016	.	NC_007793	2561678	2561678
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UN	17019	.	NC_007793	2561739	2561739
UN	17020	.	NC_007793	2561759	2561759
UN	17021	.	NC_007793	2561764	2561765
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UN	17023	.	NC_007793	2561792	2561797
UN	17024	.	NC_007793	2561809	2561809
UN	17025	.	NC_007793	2561814	2562097
UN	17026	.	NC_007793	2562099	2562100
UN	17027	.	NC_007793	2562113	2562113
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UN	17029	.	NC_007793	2562130	2562130
UN	17030	.	NC_007793	2562137	2562137
UN	17031	.	NC_007793	2562199	2562199
UN	17032	.	NC_007793	2562204	2562204
UN	17033	.	NC_007793	2562211	2562211
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UN	17035	.	NC_007793	2562217	2562219
UN	17036	.	NC_007793	2562233	2562361
UN	17037	.	NC_007793	2562364	2562364
UN	17038	.	NC_007793	2562367	2562367
UN	17039	.	NC_007793	2562370	2562370
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UN	17043	.	NC_007793	2562413	2562413
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UN	17058	.	NC_007793	2563253	2563253
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UN	17060	.	NC_007793	2563292	2563292
UN	17061	.	NC_007793	2563307	2563308
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UN	17063	.	NC_007793	2563436	2563723
UN	17064	.	NC_007793	2563725	2563726
UN	17065	.	NC_007793	2564101	2564101
UN	17066	.	NC_007793	2564104	2564104
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UN	17072	.	NC_007793	2564156	2564162
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UN	17074	.	NC_007793	2564478	2564513
UN	17075	.	NC_007793	2565724	2565724
UN	17076	.	NC_007793	2565732	2566126
UN	17077	.	NC_007793	2566131	2566132
UN	17078	.	NC_007793	2566874	2566874
UN	17079	.	NC_007793	2566996	2566996
UN	17080	.	NC_007793	2567000	2567001
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UN	17083	.	NC_007793	2567662	2567662
UN	17084	.	NC_007793	2567665	2567665
UN	17085	.	NC_007793	2567671	2567671
UN	17086	.	NC_007793	2567784	2567959
UN	17087	.	NC_007793	2568820	2568849
UN	17088	.	NC_007793	2569175	2569175
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UN	17090	.	NC_007793	2569181	2569181
UN	17091	.	NC_007793	2569183	2569183
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UN	17094	.	NC_007793	2569211	2569211
UN	17095	.	NC_007793	2569213	2569221
UN	17096	.	NC_007793	2569225	2569225
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UN	17098	.	NC_007793	2570583	2570677
UN	17099	.	NC_007793	2570775	2570792
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UN	17103	.	NC_007793	2573592	2573593
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UN	17106	.	NC_007793	2573639	2573639
UN	17107	.	NC_007793	2573641	2573641
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UN	17109	.	NC_007793	2573661	2573662
UN	17110	.	NC_007793	2573803	2573803
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UN	17115	.	NC_007793	2573859	2573859
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UN	17122	.	NC_007793	2575453	2575453
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UN	17125	.	NC_007793	2575721	2575721
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UN	17128	.	NC_007793	2575852	2575852
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UN	17135	.	NC_007793	2576181	2576181
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UN	17138	.	NC_007793	2576191	2576227
UN	17139	.	NC_007793	2576229	2576229
UN	17140	.	NC_007793	2576511	2576520
UN	17141	.	NC_007793	2577092	2577092
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UN	17146	.	NC_007793	2577539	2577539
UN	17147	.	NC_007793	2577565	2577577
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UN	17149	.	NC_007793	2577671	2577789
UN	17150	.	NC_007793	2578525	2578637
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UN	17152	.	NC_007793	2579002	2579002
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UN	17155	.	NC_007793	2579197	2579198
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UN	17157	.	NC_007793	2579381	2579927
UN	17158	.	NC_007793	2579935	2579935
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UN	17537	.	NC_007793	2644084	2644084
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UN	17663	.	NC_007793	2662326	2662329
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UN	17671	.	NC_007793	2663321	2663321
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UN	18269	.	NC_007793	2749129	2749129
UN	18270	.	NC_007793	2749131	2749131
UN	18271	.	NC_007793	2749146	2749146
UN	18272	.	NC_007793	2749151	2749151
UN	18273	.	NC_007793	2749155	2749158
UN	18274	.	NC_007793	2749160	2749160
UN	18275	.	NC_007793	2749239	2749241
UN	18276	.	NC_007793	2749252	2749346
UN	18277	.	NC_007793	2750332	2750332
UN	18278	.	NC_007793	2750337	2750337
UN	18279	.	NC_007793	2750340	2750361
UN	18280	.	NC_007793	2750363	2750363
UN	18281	.	NC_007793	2750368	2750369
UN	18282	.	NC_007793	2750468	2750564
UN	18283	.	NC_007793	2751212	2751240
UN	18284	.	NC_007793	2752773	2752966
UN	18285	.	NC_007793	2753603	2753628
UN	18286	.	NC_007793	2753630	2753778
UN	18287	.	NC_007793	2754206	2754206
UN	18288	.	NC_007793	2754215	2754215
UN	18289	.	NC_007793	2754262	2754262
UN	18290	.	NC_007793	2754285	2754738
UN	18291	.	NC_007793	2756066	2756067
UN	18292	.	NC_007793	2756069	2756073
UN	18293	.	NC_007793	2756142	2756145
UN	18294	.	NC_007793	2756170	2756170
UN	18295	.	NC_007793	2756340	2756340
UN	18296	.	NC_007793	2756342	2756342
UN	18297	.	NC_007793	2756350	2756350
UN	18298	.	NC_007793	2756353	2756353
UN	18299	.	NC_007793	2756362	2756362
UN	18300	.	NC_007793	2756364	2756365
UN	18301	.	NC_007793	2756369	2756369
UN	18302	.	NC_007793	2756373	2756374
UN	18303	.	NC_007793	2756380	2756380
UN	18304	.	NC_007793	2756402	2756402
UN	18305	.	NC_007793	2756407	2756929
UN	18306	.	NC_007793	2756931	2756932
UN	18307	.	NC_007793	2756936	2756936
UN	18308	.	NC_007793	2760393	2760393
UN	18309	.	NC_007793	2760409	2760409
UN	18310	.	NC_007793	2760454	2760454
UN	18311	.	NC_007793	2760648	2760648
UN	18312	.	NC_007793	2760652	2760669
UN	18313	.	NC_007793	2760882	2761011
UN	18314	.	NC_007793	2761013	2761013
UN	18315	.	NC_007793	2761018	2761018
UN	18316	.	NC_007793	2761020	2761020
UN	18317	.	NC_007793	2761024	2761083
UN	18318	.	NC_007793	2761089	2761089
UN	18319	.	NC_007793	2761106	2761149
UN	18320	.	NC_007793	2761152	2761152
UN	18321	.	NC_007793	2764041	2764041
UN	18322	.	NC_007793	2764092	2764344
UN	18323	.	NC_007793	2764347	2764347
UN	18324	.	NC_007793	2764361	2764361
UN	18325	.	NC_007793	2764380	2764380
UN	18326	.	NC_007793	2764382	2764383
UN	18327	.	NC_007793	2764386	2764386
UN	18328	.	NC_007793	2764390	2764390
UN	18329	.	NC_007793	2764552	2764552
UN	18330	.	NC_007793	2764556	2764672
UN	18331	.	NC_007793	2764750	2764750
UN	18332	.	NC_007793	2764752	2764752
UN	18333	.	NC_007793	2764755	2764755
UN	18334	.	NC_007793	2764759	2764771
UN	18335	.	NC_007793	2764776	2764776
UN	18336	.	NC_007793	2764779	2764781
UN	18337	.	NC_007793	2764783	2764783
UN	18338	.	NC_007793	2764786	2764795
UN	18339	.	NC_007793	2764800	2764800
UN	18340	.	NC_007793	2764803	2764804
UN	18341	.	NC_007793	2764810	2764826
UN	18342	.	NC_007793	2764829	2764829
UN	18343	.	NC_007793	2764890	2764916
UN	18344	.	NC_007793	2764918	2764918
UN	18345	.	NC_007793	2764921	2764954
UN	18346	.	NC_007793	2765147	2765147
UN	18347	.	NC_007793	2765152	2765157
UN	18348	.	NC_007793	2765161	2765161
UN	18349	.	NC_007793	2765171	2765171
UN	18350	.	NC_007793	2765180	2765182
UN	18351	.	NC_007793	2765189	2765189
UN	18352	.	NC_007793	2765192	2765192
UN	18353	.	NC_007793	2765219	2765219
UN	18354	.	NC_007793	2765221	2765242
UN	18355	.	NC_007793	2765255	2765265
UN	18356	.	NC_007793	2765268	2765268
UN	18357	.	NC_007793	2765272	2765279
UN	18358	.	NC_007793	2765376	2766293
UN	18359	.	NC_007793	2766302	2766404
UN	18360	.	NC_007793	2766406	2766406
UN	18361	.	NC_007793	2766628	2766655
UN	18362	.	NC_007793	2766757	2766760
UN	18363	.	NC_007793	2767399	2767399
UN	18364	.	NC_007793	2767410	2767410
UN	18365	.	NC_007793	2767417	2767417
UN	18366	.	NC_007793	2767426	2767426
UN	18367	.	NC_007793	2767431	2767431
UN	18368	.	NC_007793	2767433	2767439
UN	18369	.	NC_007793	2767441	2767445
UN	18370	.	NC_007793	2767452	2767453
UN	18371	.	NC_007793	2767945	2767967
UN	18372	.	NC_007793	2767972	2767972
UN	18373	.	NC_007793	2767975	2767975
UN	18374	.	NC_007793	2768058	2768065
UN	18375	.	NC_007793	2768077	2768077
UN	18376	.	NC_007793	2768079	2768079
UN	18377	.	NC_007793	2768082	2768091
UN	18378	.	NC_007793	2768095	2768095
UN	18379	.	NC_007793	2768237	2768237
UN	18380	.	NC_007793	2768239	2768295
UN	18381	.	NC_007793	2768297	2768297
UN	18382	.	NC_007793	2768983	2769107
UN	18383	.	NC_007793	2769935	2769944
UN	18384	.	NC_007793	2769946	2769947
UN	18385	.	NC_007793	2770580	2770594
UN	18386	.	NC_007793	2770895	2771280
UN	18387	.	NC_007793	2771326	2771327
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UN	18389	.	NC_007793	2771336	2771336
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UN	18392	.	NC_007793	2771349	2771476
UN	18393	.	NC_007793	2771481	2772046
UN	18394	.	NC_007793	2772240	2772292
UN	18395	.	NC_007793	2772298	2772299
UN	18396	.	NC_007793	2772470	2772470
UN	18397	.	NC_007793	2772473	2772473
UN	18398	.	NC_007793	2772479	2772544
UN	18399	.	NC_007793	2772550	2772550
UN	18400	.	NC_007793	2773337	2773339
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UN	18402	.	NC_007793	2773394	2773394
UN	18403	.	NC_007793	2773396	2773397
UN	18404	.	NC_007793	2773407	2773410
UN	18405	.	NC_007793	2774251	2774357
UN	18406	.	NC_007793	2775153	2775153
UN	18407	.	NC_007793	2775156	2775156
UN	18408	.	NC_007793	2775349	2775356
UN	18409	.	NC_007793	2777070	2777397
UN	18410	.	NC_007793	2777419	2777445
UN	18411	.	NC_007793	2779140	2779196
UN	18412	.	NC_007793	2779203	2779231
UN	18413	.	NC_007793	2779236	2779236
UN	18414	.	NC_007793	2779260	2779260
UN	18415	.	NC_007793	2779282	2779289
UN	18416	.	NC_007793	2779293	2779299
UN	18417	.	NC_007793	2779309	2779309
UN	18418	.	NC_007793	2779311	2779311
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UN	18421	.	NC_007793	2779749	2779750
UN	18422	.	NC_007793	2779788	2779789
UN	18423	.	NC_007793	2780020	2780187
UN	18424	.	NC_007793	2780201	2780215
UN	18425	.	NC_007793	2780225	2780227
UN	18426	.	NC_007793	2780231	2780231
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UN	18428	.	NC_007793	2780262	2780262
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UN	18430	.	NC_007793	2780275	2780277
UN	18431	.	NC_007793	2780309	2780309
UN	18432	.	NC_007793	2780312	2780328
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UN	18436	.	NC_007793	2780351	2780351
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UN	18442	.	NC_007793	2780397	2780397
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UN	18471	.	NC_007793	2782072	2782072
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UN	18507	.	NC_007793	2787692	2787692
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UN	18639	.	NC_007793	2806503	2806503
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UN	18668	.	NC_007793	2808402	2808403
UN	18669	.	NC_007793	2808411	2808411
UN	18670	.	NC_007793	2808421	2808421
UN	18671	.	NC_007793	2808423	2808936
UN	18672	.	NC_007793	2809019	2809019
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UN	18704	.	NC_007793	2812215	2812340
UN	18705	.	NC_007793	2812342	2812343
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UN	18708	.	NC_007793	2812357	2812357
UN	18709	.	NC_007793	2812362	2812362
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UN	18715	.	NC_007793	2812918	2812918
UN	18716	.	NC_007793	2812920	2812920
UN	18717	.	NC_007793	2812925	2813355
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UN	18720	.	NC_007793	2813474	2813671
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UN	18731	.	NC_007793	2814342	2814354
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UN	18733	.	NC_007793	2814563	2814563
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UN	18740	.	NC_007793	2814807	2814807
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UN	18764	.	NC_007793	2815590	2815592
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UN	18775	.	NC_007793	2816233	2816233
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UN	18778	.	NC_007793	2816366	2816366
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UN	18780	.	NC_007793	2816502	2816503
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UN	18820	.	NC_007793	2819451	2819451
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UN	19009	.	NC_007793	2843041	2843041
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UN	19011	.	NC_007793	2843062	2843062
UN	19012	.	NC_007793	2843082	2843082
UN	19013	.	NC_007793	2843086	2843095
UN	19014	.	NC_007793	2843130	2843130
UN	19015	.	NC_007793	2843138	2843138
UN	19016	.	NC_007793	2843143	2843187
UN	19017	.	NC_007793	2843193	2843258
UN	19018	.	NC_007793	2843284	2843335
UN	19019	.	NC_007793	2843337	2843337
UN	19020	.	NC_007793	2843340	2843340
UN	19021	.	NC_007793	2843343	2843377
UN	19022	.	NC_007793	2843380	2843380
UN	19023	.	NC_007793	2843521	2843521
UN	19024	.	NC_007793	2843551	2843551
UN	19025	.	NC_007793	2844030	2844031
UN	19026	.	NC_007793	2844035	2844167
UN	19027	.	NC_007793	2844270	2844276
UN	19028	.	NC_007793	2844278	2844590
UN	19029	.	NC_007793	2844593	2844608
UN	19030	.	NC_007793	2844612	2844612
UN	19031	.	NC_007793	2844701	2844702
UN	19032	.	NC_007793	2844705	2844709
UN	19033	.	NC_007793	2844713	2844713
UN	19034	.	NC_007793	2844721	2844721
UN	19035	.	NC_007793	2844738	2844746
UN	19036	.	NC_007793	2844768	2844777
UN	19037	.	NC_007793	2844816	2844816
UN	19038	.	NC_007793	2845072	2845074
UN	19039	.	NC_007793	2845079	2845079
UN	19040	.	NC_007793	2845094	2845094
UN	19041	.	NC_007793	2845098	2845098
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UN	19043	.	NC_007793	2845128	2845153
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UN	19046	.	NC_007793	2845287	2845287
UN	19047	.	NC_007793	2845292	2845292
UN	19048	.	NC_007793	2845296	2845296
UN	19049	.	NC_007793	2845326	2845326
UN	19050	.	NC_007793	2845332	2845332
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UN	19052	.	NC_007793	2845341	2845342
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UN	19055	.	NC_007793	2845352	2845353
UN	19056	.	NC_007793	2845370	2845370
UN	19057	.	NC_007793	2845373	2845373
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UN	19059	.	NC_007793	2845382	2845431
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UN	19061	.	NC_007793	2845443	2845444
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UN	19063	.	NC_007793	2845489	2845489
UN	19064	.	NC_007793	2845493	2845493
UN	19065	.	NC_007793	2845622	2845641
UN	19066	.	NC_007793	2845659	2845659
UN	19067	.	NC_007793	2845737	2845852
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UN	19069	.	NC_007793	2845983	2846124
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UN	19071	.	NC_007793	2846128	2846130
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UN	19073	.	NC_007793	2846139	2846139
UN	19074	.	NC_007793	2846141	2846141
UN	19075	.	NC_007793	2846143	2846148
UN	19076	.	NC_007793	2846157	2846157
UN	19077	.	NC_007793	2846288	2846310
UN	19078	.	NC_007793	2846448	2846448
UN	19079	.	NC_007793	2846459	2846460
UN	19080	.	NC_007793	2846462	2846480
UN	19081	.	NC_007793	2846483	2846501
UN	19082	.	NC_007793	2846505	2846505
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UN	19085	.	NC_007793	2847393	2847394
UN	19086	.	NC_007793	2847397	2847397
UN	19087	.	NC_007793	2847401	2847403
UN	19088	.	NC_007793	2847429	2847581
UN	19089	.	NC_007793	2847583	2847652
UN	19090	.	NC_007793	2847859	2847859
UN	19091	.	NC_007793	2847971	2847974
UN	19092	.	NC_007793	2847978	2847978
UN	19093	.	NC_007793	2847980	2847980
UN	19094	.	NC_007793	2848089	2848089
UN	19095	.	NC_007793	2848093	2848093
UN	19096	.	NC_007793	2848200	2848220
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UN	19100	.	NC_007793	2848409	2848409
UN	19101	.	NC_007793	2848655	2848655
UN	19102	.	NC_007793	2848661	2848661
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UN	19107	.	NC_007793	2848767	2848768
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UN	19110	.	NC_007793	2849821	2849821
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UN	19119	.	NC_007793	2849878	2849879
UN	19120	.	NC_007793	2849881	2849998
UN	19121	.	NC_007793	2850104	2850104
UN	19122	.	NC_007793	2850137	2850137
UN	19123	.	NC_007793	2850188	2850189
UN	19124	.	NC_007793	2850516	2850538
UN	19125	.	NC_007793	2850636	2850777
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UN	19127	.	NC_007793	2851420	2851420
UN	19128	.	NC_007793	2851891	2851891
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UN	19130	.	NC_007793	2851899	2851899
UN	19131	.	NC_007793	2851903	2851904
UN	19132	.	NC_007793	2851906	2851906
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UN	19138	.	NC_007793	2852067	2852067
UN	19139	.	NC_007793	2852069	2852069
UN	19140	.	NC_007793	2852116	2852116
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UN	19147	.	NC_007793	2852152	2852214
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UN	19149	.	NC_007793	2852221	2852222
UN	19150	.	NC_007793	2852235	2852235
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UN	19153	.	NC_007793	2852673	2852673
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UN	19157	.	NC_007793	2852771	2852771
UN	19158	.	NC_007793	2852775	2852775
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UN	19168	.	NC_007793	2854933	2854958
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UN	19174	.	NC_007793	2856018	2856018
UN	19175	.	NC_007793	2856044	2856044
UN	19176	.	NC_007793	2856098	2856098
UN	19177	.	NC_007793	2856123	2856123
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UN	19179	.	NC_007793	2856570	2856570
UN	19180	.	NC_007793	2856575	2856583
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UN	19182	.	NC_007793	2856643	2856644
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UN	19188	.	NC_007793	2857452	2857683
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UN	19192	.	NC_007793	2858446	2858458
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UN	19194	.	NC_007793	2858462	2858464
UN	19195	.	NC_007793	2858467	2858467
UN	19196	.	NC_007793	2858470	2858470
UN	19197	.	NC_007793	2858479	2858479
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UN	19200	.	NC_007793	2858491	2858621
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UN	19215	.	NC_007793	2859591	2859592
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UN	19220	.	NC_007793	2859689	2859703
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UN	19228	.	NC_007793	2859873	2859873
UN	19229	.	NC_007793	2859882	2859882
UN	19230	.	NC_007793	2859906	2859906
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UN	19233	.	NC_007793	2860054	2860055
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UN	19244	.	NC_007793	2860850	2861007
UN	19245	.	NC_007793	2861010	2861010
UN	19246	.	NC_007793	2861015	2861015
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UN	19248	.	NC_007793	2861037	2861037
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UN	19253	.	NC_007793	2861090	2861091
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UN	19260	.	NC_007793	2861300	2861301
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UN	19281	.	NC_007793	2862906	2862906
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UN	19300	.	NC_007793	2866043	2866044
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UN	19302	.	NC_007793	2866409	2866409
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UN	19305	.	NC_007793	2866468	2866862
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