##FastQC	0.11.7
>>Basic Statistics	pass
#Measure	Value
Filename	D17_CIPA.forward.fq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5391429
Sequences flagged as poor quality	0
Sequence length	36-298
%GC	37
>>END_MODULE
>>Per base sequence quality	warn
#Base	Mean	Median	Lower Quartile	Upper Quartile	10th Percentile	90th Percentile
1	25.413942945367545	27.0	23.0	28.0	21.0	28.0
2	25.40400198166386	27.0	23.0	28.0	21.0	28.0
3	25.270987895787925	27.0	23.0	28.0	21.0	28.0
4	25.379713430335446	27.0	23.0	28.0	21.0	29.0
5	25.36538253587314	27.0	23.0	28.0	21.0	29.0
6	25.63816197894844	27.0	24.0	28.0	22.0	29.0
7	25.560132387906805	27.0	23.0	28.0	21.0	29.0
8	25.517756795090875	27.0	23.0	28.0	21.0	29.0
9	25.59077454233377	27.0	24.0	28.0	22.0	29.0
10-14	25.723165750675747	27.0	24.0	28.0	21.8	29.0
15-19	25.776681135928897	27.0	24.0	28.0	22.0	29.0
20-24	25.777487897920942	27.0	24.0	28.0	21.8	29.0
25-29	25.809454673334283	27.0	24.0	28.0	22.0	29.0
30-34	25.791154070655477	27.0	24.0	28.0	21.8	29.0
35-39	25.801257408989596	27.0	24.0	28.0	22.0	29.0
40-44	25.75048393346169	27.0	24.0	28.0	22.0	29.0
45-49	25.84753150617849	27.0	24.0	28.0	22.0	29.0
50-54	25.85568995248458	27.0	24.0	28.0	22.0	29.0
55-59	25.845587249182206	27.0	24.0	28.0	22.0	29.0
60-64	25.89576938374927	27.0	24.0	28.0	22.0	29.0
65-69	25.97890104692619	27.0	24.0	28.0	22.0	29.0
70-74	25.91031152062042	27.0	24.0	28.0	22.0	29.0
75-79	25.90991781198908	27.0	24.0	28.0	22.0	29.0
80-84	25.80994980308133	27.0	24.0	28.0	22.0	29.0
85-89	25.8694139075728	27.0	24.0	28.0	22.0	29.0
90-94	25.82871782701563	27.0	24.0	28.0	22.0	29.0
95-99	25.824723642944935	27.0	24.0	28.0	22.0	29.0
100-104	25.761193843293746	27.0	24.0	28.0	22.0	29.0
105-109	25.70796907512272	27.0	24.0	28.0	21.8	29.0
110-114	25.656055027614343	27.0	24.0	28.0	21.4	29.0
115-119	25.67291008617434	27.0	24.0	28.0	21.2	29.0
120-124	25.55535105282926	27.0	24.0	28.0	21.0	29.0
125-129	25.576140903993377	27.0	24.0	28.0	21.0	29.0
130-134	25.542836977685386	27.0	23.6	28.0	21.0	29.0
135-139	25.48261744729708	27.0	23.2	28.0	21.0	29.0
140-144	25.429045102860584	27.0	23.0	28.0	21.0	29.0
145-149	25.378965195927798	27.0	23.0	28.0	21.0	29.0
150-154	25.22610726474949	26.8	23.0	28.0	20.8	29.0
155-159	25.156680259996676	26.6	23.0	28.0	20.8	29.0
160-164	25.14772667514038	26.2	23.0	28.0	20.6	29.0
165-169	25.312876180460826	27.0	23.0	28.0	21.0	29.0
170-174	25.26007300082437	26.6	23.0	28.0	21.0	29.0
175-179	25.19381094667623	26.0	23.0	28.0	21.0	29.0
180-184	25.093515708424142	26.0	23.0	28.0	20.8	28.8
185-189	25.044276667839327	26.0	23.0	28.0	20.6	28.0
190-194	25.065752002672667	26.0	23.0	27.4	20.6	28.0
195-199	24.98961291608929	26.0	23.0	27.0	20.0	28.0
200-204	24.938601405122238	26.0	23.0	27.0	20.0	28.0
205-209	24.85641968633387	26.0	23.0	27.0	20.0	28.0
210-214	24.804861791839723	26.0	23.0	27.0	20.0	28.0
215-219	24.740274909079293	26.0	23.0	27.0	20.0	28.0
220-224	24.63417670284005	26.0	23.0	27.0	20.0	28.0
225-229	24.560627658526677	25.8	23.0	27.0	20.0	28.0
230-234	24.499000911580147	26.0	23.0	27.0	20.0	28.0
235-239	24.464198528970524	25.6	22.6	27.0	20.0	28.0
240-244	24.343820029752514	25.0	22.0	27.0	20.0	28.0
245-249	24.221430430924194	25.0	22.0	27.0	19.6	28.0
250-254	24.111806979647596	25.0	22.0	27.0	19.2	28.0
255-259	24.035074757572282	25.0	22.0	27.0	19.0	28.0
260-264	23.986278400539895	25.0	22.0	27.0	19.0	28.0
265-269	23.838489327887142	25.0	22.0	27.0	18.8	28.0
270-274	23.782084818619577	24.4	22.0	27.0	18.6	28.0
275-279	23.706518725148996	24.8	21.8	27.0	18.4	28.0
280-284	23.758987351500913	24.666666666666668	21.666666666666668	27.0	18.0	28.0
285-289	23.591272727272727	NaN	NaN	NaN	NaN	NaN
290-294	23.901641414141416	NaN	NaN	NaN	NaN	NaN
295-298	22.87142857142857	NaN	NaN	NaN	NaN	NaN
>>END_MODULE
>>Per sequence quality scores	warn
#Quality	Count
17	4.0
18	244.0
19	3184.0
20	16791.0
21	52825.0
22	131788.0
23	309563.0
24	723151.0
25	1564134.0
26	2112047.0
27	475922.0
28	1776.0
>>END_MODULE
>>Per base sequence content	fail
#Base	G	A	T	C
1	22.28322027425382	41.367548380958	25.50668848648475	10.84254285830343
2	33.383208793067666	43.244750139527014	10.08409829750146	13.28794276990386
3	18.677089135366522	40.235399557334425	27.669881213310983	13.41763009398807
4	28.713815947497405	33.07739005744117	24.717918013943986	13.490875981117437
5	26.11997672602199	37.89972936674118	19.32300323346556	16.65729067377128
6	19.579873907270226	43.275317174723064	22.28980479943258	14.855004118574131
7	21.985748119839844	35.402079856750404	26.801317424378585	15.810854599031165
8	20.606021149494875	32.942342373422704	29.42014074561679	17.03149573146563
9	18.22207062357679	29.705055932295497	31.980204135118907	20.092669309008798
10-14	18.81843199641505	34.27675668176285	30.012848170679796	16.891963151142303
15-19	20.02606730052459	34.50058973233256	28.74187529873805	16.731467668404797
20-24	21.2461408654366	34.25615731933036	28.062359719473264	16.43534209575977
25-29	19.550664582618076	34.40363955455965	28.145543602632994	17.900152260189277
30-34	18.857197229157613	33.02079652722868	30.069738468224287	18.052267775389417
35-39	18.941445574190794	33.423404113768704	29.265683993707114	18.369466318333384
40-44	20.20322276309568	33.800328343610836	28.2957112910385	17.700737602254982
45-49	19.899881446890223	35.021521016236605	27.78856465763937	17.290032879233802
50-54	20.1658981604144	33.90182729328459	27.917101855236815	18.015172691064194
55-59	20.65467651988911	33.650357004706336	28.52056604990007	17.17440042550448
60-64	18.57881626638365	33.34732918499767	30.037424104275846	18.036430444342834
65-69	20.119697282052606	32.59670894758674	29.299232533893193	17.984361236467457
70-74	20.473127815845768	34.621724723881705	27.875867484249667	17.029279976022863
75-79	19.395989955065115	33.28240335374867	28.594916592379306	18.72669009880691
80-84	18.654406786198365	35.016844039308616	28.94708424317864	17.38166493131438
85-89	18.569009997092813	34.27702776164863	30.013944049685293	17.140018191573258
90-94	18.823205092696647	34.587899774402324	28.52581635998288	18.063078772918146
95-99	19.951679694738214	34.9858994859688	28.366467871334354	16.69595294795863
100-104	19.53712958901687	35.61343535151839	28.35699463420071	16.492440425264025
105-109	19.46695724349794	33.424690950944424	29.60071440864505	17.507637396912585
110-114	19.457387220743698	33.77102752291403	28.465420074233837	18.306165182108437
115-119	18.35182931615337	35.68312969828969	28.543822994804106	17.421217990752833
120-124	19.232221087139816	35.461476385329796	29.46350213500301	15.842800392527378
125-129	19.18250550872491	35.906312547550286	28.203454400556687	16.707727543168122
130-134	19.090652391129442	35.03166423204732	28.712845909600198	17.16483746722304
135-139	19.362842441958048	35.28149437312044	28.695070472102024	16.66059271281949
140-144	19.087971650522192	36.24985628420247	27.892210885367607	16.769961179907728
145-149	18.421985392145405	35.77390170232008	28.291674370647385	17.51243853488713
150-154	18.853129882313517	37.452547480139316	27.913875184014596	15.780447453532572
155-159	20.92202169422288	32.99631110380144	30.796858410623056	15.284808791352622
160-164	20.29813235261085	32.552220000939336	30.916165176319716	16.2334824701301
165-169	19.092292927277423	33.99676704219249	28.502054721575128	18.40888530895496
170-174	20.60291365247981	33.18392295286333	28.877745218786544	17.335418175870323
175-179	19.588892073775007	35.16218624931397	28.767429506676358	16.481492170234663
180-184	19.390528415675114	36.032471544365585	27.824400379920753	16.752599660038545
185-189	18.98443819903205	35.27916426276722	28.690958811728656	17.045438726472074
190-194	19.705309349524295	35.357004552463835	28.21044269301182	16.727243405000046
195-199	19.3302603358178	35.49140969482001	28.51067583562755	16.66765413373464
200-204	19.504121940969863	35.351502039785764	28.397034485263216	16.747341533981153
205-209	19.90349485820052	35.244865682430856	28.511145745324956	16.340493714043664
210-214	19.744125245587167	34.991104716820594	28.47759162141675	16.78717841617549
215-219	19.8255816415995	35.02429065773256	28.439341123850586	16.710786576817352
220-224	19.764847086515996	35.327122406530215	28.315067615202206	16.592962891751586
225-229	19.936159036728757	35.1286920683664	28.390642046143277	16.544506848761568
230-234	19.90585607148556	35.117053044290955	28.342337413663405	16.634753470560078
235-239	19.771172291878088	34.93796444822732	28.39067666219269	16.900186597701904
240-244	19.765926698097562	34.795896609727784	28.335189177663533	17.102987514511124
245-249	20.068524929512115	34.333844890966844	28.534208929654874	17.063421249866163
250-254	20.08574839900141	34.93433192228373	27.689134918050577	17.29078476066428
255-259	19.371144619602468	35.22960932145305	27.90438656614119	17.49485949280329
260-264	19.398642095053344	36.01219343217403	27.795482887626438	16.793681585146185
265-269	20.0	35.853379152348225	26.804123711340207	17.342497136311568
270-274	18.418907905460472	36.79706601466993	27.913610431947838	16.87041564792176
275-279	18.4375	38.28125	26.718750000000004	16.5625
280-284	18.717504332755635	38.30155979202773	25.82322357019064	17.157712305025996
285-289	16.260162601626014	43.49593495934959	25.203252032520325	15.040650406504067
290-294	19.230769230769234	41.02564102564102	21.794871794871796	17.94871794871795
295-298	18.75	37.5	12.5	31.25
>>END_MODULE
>>Per sequence GC content	pass
#GC Content	Count
0	0.0
1	0.0
2	0.0
3	0.0
4	0.5
5	1.0
6	1.5
7	8.0
8	17.5
9	33.5
10	58.5
11	96.0
12	201.5
13	445.0
14	837.0
15	1476.5
16	2386.0
17	4147.5
18	5614.5
19	7505.333333333334
20	11904.333333333334
21	16800.500000000004
22	23549.33333333331
23	39828.50000000006
24	60267.0000000005
25	86576.49999999933
26	104977.16666666396
27	117244.33333332809
28	143593.33333332886
29	177246.6666666749
30	219763.16666669192
31	250376.8333333744
32	273944.66666670755
33	303419.5000000104
34	329306.8333333164
35	359389.9999999577
36	367395.83333328745
37	366157.4999999601
38	360389.666666632
39	333388.4999999864
40	330447.4999999902
41	307976.0000000011
42	267472.3333333515
43	217916.33333334248
44	169875.66666666846
45	150707.99999999927
46	117622.33333333072
47	85914.16666666642
48	71606.16666666686
49	67899.3333333335
50	131138.33333333296
51	127313.99999999975
52	51047.833333333416
53	37252.499999999985
54	29679.999999999975
55	22382.166666666664
56	15969.33333333334
57	13666.333333333334
58	11582.666666666668
59	8846.5
60	6784.5
61	6503.0
62	6007.5
63	3940.0
64	2292.3333333333335
65	1948.8333333333335
66	1571.3333333333333
67	866.3333333333334
68	433.5
69	183.0
70	77.5
71	35.0
72	15.5
73	8.5
74	3.5
75	0.5
76	0.0
77	0.0
78	0.0
79	0.0
80	0.5
81	1.0
82	1.0
83	0.5
84	0.0
85	0.0
86	0.0
87	0.0
88	0.0
89	0.0
90	0.0
91	0.0
92	0.0
93	0.0
94	0.0
95	0.0
96	0.0
97	0.0
98	0.0
99	0.0
100	0.0
>>END_MODULE
>>Per base N content	pass
#Base	N-Count
1	0.0
2	0.0
3	0.0
4	0.0
5	0.0
6	0.0
7	0.0
8	0.0
9	0.0
10-14	0.0
15-19	0.0
20-24	0.0
25-29	0.0
30-34	0.0
35-39	0.0
40-44	0.0
45-49	0.0
50-54	0.0
55-59	0.0
60-64	0.0
65-69	0.0
70-74	0.0
75-79	0.0
80-84	0.0
85-89	0.0
90-94	0.0
95-99	0.0
100-104	0.0
105-109	0.0
110-114	0.0
115-119	0.0
120-124	0.0
125-129	0.0
130-134	0.0
135-139	0.0
140-144	0.0
145-149	0.0
150-154	0.0
155-159	0.0
160-164	0.0
165-169	0.0
170-174	0.0
175-179	0.0
180-184	0.0
185-189	0.0
190-194	0.0
195-199	0.0
200-204	0.0
205-209	0.0
210-214	0.0
215-219	0.0
220-224	0.0
225-229	0.0
230-234	0.0
235-239	0.0
240-244	0.0
245-249	0.0
250-254	0.0
255-259	0.0
260-264	0.0
265-269	0.0
270-274	0.0
275-279	0.0
280-284	0.0
285-289	0.0
290-294	0.0
295-298	0.0
>>END_MODULE
>>Sequence Length Distribution	warn
#Length	Count
30-39	74632.0
40-49	201029.0
50-59	229769.0
60-69	263457.0
70-79	309232.0
80-89	370712.0
90-99	460353.0
100-109	523444.0
110-119	521164.0
120-129	469862.0
130-139	429792.0
140-149	382327.0
150-159	316696.0
160-169	257966.0
170-179	225665.0
180-189	132049.0
190-199	94459.0
200-209	56209.0
210-219	33754.0
220-229	18806.0
230-239	10240.0
240-249	5447.0
250-259	2625.0
260-269	1106.0
270-279	477.0
280-289	133.0
290-299	24.0
>>END_MODULE
>>Sequence Duplication Levels	fail
#Total Deduplicated Percentage	34.89287700771292
#Duplication Level	Percentage of deduplicated	Percentage of total
1	77.83802590961425	27.159926645873405
2	11.413448573718197	7.96496114633211
3	3.7547879110401334	3.9304605830991206
4	1.6899148492904308	2.3586396395919484
5	1.0189828584635934	1.7777621776668948
6	0.7080201955183406	1.4822916960718986
7	0.47685767871453777	1.1647255433498895
8	0.35643542513404985	0.9949645960315414
9	0.30737912726032585	0.9652807874009418
>10	2.0136040654357994	13.780358907700165
>50	0.22730900401348822	5.533701343585593
>100	0.16531262343559772	11.245253119641017
>500	0.016470218031952578	3.9608378840576353
>1k	0.012021670058237864	8.333754698376277
>5k	7.414245850895588E-4	1.7170024153836196
>10k+	6.884656861545903E-4	7.630078815838001
>>END_MODULE
>>Overrepresented sequences	fail
#Sequence	Count	Percentage	Possible Source
TCTGGTGACTATAGCAAGGAGGTCACACCTGTTCCCATGCCGAACACAGA	90593	1.6803151817449509	No Hit
AAAGGAGGTACTCATATGGGTAAACAATGTTTCGTAACAGGTCGTAAAGC	70289	1.3037174374363458	No Hit
GGGGACGTTCATGGATTCGACAGGGGTCCCCCGAGCTCATTAAGCGTGTC	68333	1.2674376310992874	No Hit
AGGTAGCCGTATCGGAAGGTGCGGCTGGATCACCTCCTTTCTAAGGATAT	41826	0.775786901765747	No Hit
CAAACAATAATTTCGCAGTAGCTGCCTAATCGCACTCTGCATCGCCTAAC	35850	0.6649443032635689	No Hit
TTAAAGGAGGTACTCATATGGGTAAACAATGTTTCGTAACAGGTCGTAAA	22613	0.41942497990792427	No Hit
GTAACACGTGGATAACCTACCTATAAGACTGGGATAACTTCGGGAAACCG	16036	0.29743505849747814	No Hit
TCAAACAATAATTTCGCAGTAGCTGCCTAATCGCACTCTGCATCGCCTAA	12543	0.23264704033012398	No Hit
AGTAGAGTTAGTTTCCTTGGACTCAGTGCTATGTATTTTTCTTAATTATC	11555	0.21432165757909452	No Hit
ACTGAATGACAATATGTCAACGTTAATTCCAAAAACGTAACTATAAGTTA	11544	0.2141176300383442	No Hit
TATGAGTACTTTAACTTATGGATTCAACGGTAATGTTACTGGTGATGATA	11181	0.20738472119358337	No Hit
AAACAGGGCACCCACCTGTATATAACAGGCCGAATGATCAAGCTATTATA	10452	0.1938632596293116	No Hit
ACCAGACTTCGCTACAGTTATTACTATGGATAGAAAAGCATCCAAACAAC	10093	0.18720454261755093	No Hit
AGGTACTCATATGGGTAAACAATGTTTCGTAACAGGTCGTAAAGCTTCGA	8966	0.16630099366976733	No Hit
CAAGGTAGCCGTATCGGAAGGTGCGGCTGGATCACCTCCTTTCTAAGGAT	8349	0.15485690342949893	No Hit
GGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATG	8008	0.14853204966623876	No Hit
ACAAGAAACAGCACACATCAATGAATTAACACCTTAGATTCATCATGAGA	7504	0.13918387870822374	No Hit
AGTAGAGTTAGTTTCCTTGGACTCAGTGCTATGTATTTTCTTAATTATCA	7322	0.1358081503067183	No Hit
GCATTAAGTGGATCATCATATGTGCCGTAGGGTAGCCGAGATTTAGCTAA	6447	0.11957868683794223	No Hit
CACTAAAAAATAAGATGAATAATTAATTACTTTCATTGTAAATTTGTTAT	6297	0.11679649310043776	No Hit
CAAGCAAAACCGAGTGAATAAAGAGTTTTAAATAAGCTTGAATTCATAAG	6166	0.11436671056968384	No Hit
ATATCATTTCAACAATCGGTGACTTAGTAAAATGGATTATCGACACAGTG	6151	0.1140884911959334	No Hit
TACTAAACGTAGATGGAACGCTAACCTTCAAAAAGTTAGAATCCTAGTTG	6149	0.11405139527943334	No Hit
AACACGTGGATAACCTACCTATAAGACTGGGATAACTTCGGGAAACCGGA	5731	0.10629834873092088	No Hit
AGGAGGTACTCATATGGGTAAACAATGTTTCGTAACAGGTCGTAAAGCTT	5489	0.10180974283441366	No Hit
>>END_MODULE
>>Adapter Content	pass
#Position	Illumina Universal Adapter	Illumina Small RNA 3' Adapter	Illumina Small RNA 5' Adapter	Nextera Transposase Sequence	SOLID Small RNA Adapter
1	0.0	0.0	0.0	0.0	0.0
2	0.0	0.0	0.0	0.0	0.0
3	0.0	0.0	0.0	0.0	0.0
4	0.0	0.0	0.0	0.0	0.0
5	0.0	0.0	0.0	0.0	0.0
6	0.0	0.0	0.0	0.0	0.0
7	0.0	0.0	0.0	0.0	0.0
8	0.0	0.0	0.0	0.0	0.0
9	0.0	0.0	0.0	0.0	0.0
10-14	0.0	0.0	0.0	0.0	0.0
15-19	0.0	0.0	0.0	0.0	0.0
20-24	0.0	0.0	0.0	0.0	0.0
25-29	0.0	0.0	0.0	0.0	0.0
30-34	0.0	0.0	0.0	0.0	0.0
35-39	0.0	0.0	0.0	0.0	0.0
40-44	0.0	0.0	0.0	0.0	0.0
45-49	0.0	0.0	0.0	0.0	0.0
50-54	0.0	0.0	0.0	0.0	0.0
55-59	0.0	0.0	0.0	0.0	0.0
60-64	0.0	0.0	0.0	0.0	0.0
65-69	0.0	0.0	0.0	0.0	0.0
70-74	0.0	0.0	0.0	0.0	0.0
75-79	0.0	0.0	0.0	0.0	0.0
80-84	0.0	0.0	0.0	0.0	0.0
85-89	0.0	0.0	0.0	0.0	0.0
90-94	0.0	0.0	0.0	0.0	0.0
95-99	0.0	0.0	0.0	0.0	0.0
100-104	0.0	0.0	0.0	0.0	0.0
105-109	0.0	0.0	0.0	0.0	0.0
110-114	0.0	0.0	0.0	0.0	0.0
115-119	0.0	0.0	0.0	0.0	0.0
120-124	0.0	0.0	0.0	0.0	0.0
125-129	0.0	0.0	0.0	0.0	0.0
130-134	0.0	0.0	0.0	0.0	0.0
135-139	0.0	0.0	0.0	0.0	0.0
140-144	0.0	0.0	0.0	0.0	0.0
145-149	0.0	0.0	0.0	0.0	0.0
150-154	0.0	0.0	0.0	0.0	0.0
155-159	0.0	0.0	0.0	0.0	0.0
160-164	0.0	0.0	0.0	0.0	0.0
165-169	0.0	0.0	0.0	0.0	0.0
170-174	0.0	0.0	0.0	0.0	0.0
175-179	0.0	0.0	0.0	0.0	0.0
180-184	0.0	0.0	0.0	0.0	0.0
185-189	0.0	0.0	0.0	0.0	0.0
190-194	0.0	0.0	0.0	0.0	0.0
195-199	0.0	0.0	0.0	0.0	0.0
200-204	0.0	0.0	0.0	0.0	0.0
205-209	0.0	0.0	0.0	0.0	0.0
210-214	0.0	0.0	0.0	0.0	0.0
215-219	0.0	0.0	0.0	0.0	0.0
220-224	0.0	0.0	0.0	0.0	0.0
225-229	0.0	0.0	0.0	0.0	0.0
230-234	0.0	0.0	0.0	0.0	0.0
235-239	0.0	0.0	0.0	0.0	0.0
240-244	0.0	0.0	0.0	0.0	0.0
245-249	0.0	0.0	0.0	0.0	0.0
250-254	0.0	0.0	0.0	0.0	0.0
255-259	0.0	0.0	0.0	0.0	0.0
260-264	0.0	0.0	0.0	0.0	0.0
265-269	0.0	0.0	0.0	0.0	0.0
270-274	0.0	0.0	0.0	0.0	0.0
275-279	0.0	0.0	0.0	0.0	0.0
280-284	0.0	0.0	0.0	0.0	0.0
285-286	0.0	0.0	0.0	0.0	0.0
>>END_MODULE
