#=GENOME_DIFF	1.0
#=CREATED	11:54:39 20 Jan 2022
#=PROGRAM	breseq 0.35.4 
#=COMMAND	breseq -j 6 -r /data/p127804/PROJECTS/JanMaarten/Yanyan_202201_SNP/genomes/Aa4S.gbk /data/p127804/PROJECTS/JanMaarten/Yanyan_202201_SNP/fastq/AA-4R-unknown_S1_L001_R1_001.fastq.gz -o /data/p127804/PROJECTS/JanMaarten/Yanyan_202201_SNP/breseq_results/fq4R_vs_gbk4S
#=REFSEQ	/data/p127804/PROJECTS/JanMaarten/Yanyan_202201_SNP/genomes/Aa4S.gbk
#=READSEQ	/data/p127804/PROJECTS/JanMaarten/Yanyan_202201_SNP/fastq/AA-4R-unknown_S1_L001_R1_001.fastq.gz
#=CONVERTED-BASES	149230137
#=CONVERTED-READS	653243
#=INPUT-BASES	149240847
#=INPUT-READS	653549
#=MAPPED-BASES	143375810
#=MAPPED-READS	629121
INS	1	57	1	861599	T
RA	2	.	1	54348	0	G	A	bias_e_value=0.0675318	bias_p_value=3.20186e-08	consensus_reject=FREQUENCY_CUTOFF	consensus_score=174.4	fisher_strand_p_value=1.50206e-09	frequency=2.121e-01	ks_quality_p_value=1	major_base=G	major_cov=45/7	major_frequency=7.879e-01	minor_base=A	minor_cov=0/14	new_cov=0/14	polymorphism_frequency=2.121e-01	polymorphism_score=12.1	prediction=polymorphism	ref_cov=45/7	total_cov=45/21
RA	3	.	1	81114	0	A	G	bias_e_value=32.874	bias_p_value=1.55864e-05	consensus_reject=FREQUENCY_CUTOFF	consensus_score=188.4	fisher_strand_p_value=1.05591e-06	frequency=2.222e-01	ks_quality_p_value=1	major_base=A	major_cov=30/40	major_frequency=7.778e-01	minor_base=G	minor_cov=20/0	new_cov=20/0	polymorphism_frequency=2.222e-01	polymorphism_score=15.4	prediction=polymorphism	ref_cov=30/40	total_cov=50/40
RA	4	.	1	114532	0	C	A	bias_e_value=11.5892	bias_p_value=5.49476e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=178.7	fisher_strand_p_value=3.46092e-07	frequency=2.537e-01	ks_quality_p_value=1	major_base=C	major_cov=34/16	major_frequency=7.463e-01	minor_base=A	minor_cov=0/17	new_cov=0/17	polymorphism_frequency=2.537e-01	polymorphism_score=12.5	prediction=polymorphism	ref_cov=34/16	total_cov=34/33
RA	5	.	1	130334	0	C	T	bias_e_value=0.0327266	bias_p_value=1.55166e-08	consensus_reject=FREQUENCY_CUTOFF	consensus_score=122.1	fisher_strand_p_value=7.02875e-10	frequency=2.632e-01	ks_quality_p_value=1	major_base=C	major_cov=5/37	major_frequency=7.368e-01	minor_base=T	minor_cov=15/0	new_cov=15/0	polymorphism_frequency=2.632e-01	polymorphism_score=10.3	prediction=polymorphism	ref_cov=5/37	total_cov=20/37
RA	6	.	1	154130	0	G	A	bias_e_value=0.212527	bias_p_value=1.00764e-07	consensus_reject=FREQUENCY_CUTOFF	consensus_score=163.6	fisher_strand_p_value=5.01022e-09	frequency=2.394e-01	ks_quality_p_value=1	major_base=G	major_cov=42/12	major_frequency=7.606e-01	minor_base=A	minor_cov=0/17	new_cov=0/17	polymorphism_frequency=2.394e-01	polymorphism_score=15.3	prediction=polymorphism	ref_cov=42/12	total_cov=42/29
RA	7	.	1	154204	0	G	T	bias_e_value=1.44756e-05	bias_p_value=6.86326e-12	consensus_reject=FREQUENCY_CUTOFF	consensus_score=116.8	fisher_strand_p_value=2.27942e-13	frequency=4.138e-01	ks_quality_p_value=1	major_base=G	major_cov=3/31	major_frequency=5.862e-01	minor_base=T	minor_cov=24/0	new_cov=24/0	polymorphism_frequency=4.138e-01	polymorphism_score=21.1	prediction=polymorphism	ref_cov=3/31	total_cov=29/31
RA	8	.	1	159743	0	T	A	bias_e_value=0.030295	bias_p_value=1.43637e-08	consensus_reject=FREQUENCY_CUTOFF	consensus_score=152.8	fisher_strand_p_value=6.48276e-10	frequency=2.958e-01	ks_quality_p_value=1	major_base=T	major_cov=12/38	major_frequency=7.042e-01	minor_base=A	minor_cov=21/0	new_cov=21/0	polymorphism_frequency=2.958e-01	polymorphism_score=14.0	prediction=polymorphism	ref_cov=12/38	total_cov=33/38
RA	9	.	1	159763	0	G	A	bias_e_value=0.0757951	bias_p_value=3.59365e-08	consensus_reject=FREQUENCY_CUTOFF	consensus_score=146.7	fisher_strand_p_value=1.69549e-09	frequency=2.958e-01	ks_quality_p_value=1	major_base=G	major_cov=13/37	major_frequency=7.042e-01	minor_base=A	minor_cov=21/0	new_cov=21/0	polymorphism_frequency=2.958e-01	polymorphism_score=16.2	prediction=polymorphism	ref_cov=13/37	total_cov=34/37
RA	10	.	1	240329	0	C	A	bias_e_value=0.00160795	bias_p_value=7.62373e-10	consensus_reject=FREQUENCY_CUTOFF	consensus_score=249.3	fisher_strand_p_value=3.02261e-11	frequency=2.500e-01	ks_quality_p_value=1	major_base=C	major_cov=56/13	major_frequency=7.500e-01	minor_base=A	minor_cov=1/22	new_cov=1/22	polymorphism_frequency=2.500e-01	polymorphism_score=20.0	prediction=polymorphism	ref_cov=56/13	total_cov=57/35
RA	11	.	1	246639	0	A	C	bias_e_value=0.471583	bias_p_value=2.2359e-07	consensus_reject=FREQUENCY_CUTOFF	consensus_score=138.5	fisher_strand_p_value=1.16017e-08	frequency=2.388e-01	ks_quality_p_value=1	major_base=A	major_cov=11/40	major_frequency=7.612e-01	minor_base=C	minor_cov=16/0	new_cov=16/0	polymorphism_frequency=2.388e-01	polymorphism_score=11.9	prediction=polymorphism	ref_cov=11/40	total_cov=27/40
RA	12	.	1	246776	0	A	C	bias_e_value=0.436362	bias_p_value=2.06891e-07	consensus_reject=FREQUENCY_CUTOFF	consensus_score=91.0	fisher_strand_p_value=1.06898e-08	frequency=4.211e-01	ks_quality_p_value=1	major_base=A	major_cov=31/2	major_frequency=5.789e-01	minor_base=C	minor_cov=5/19	new_cov=5/19	polymorphism_frequency=4.211e-01	polymorphism_score=17.0	prediction=polymorphism	ref_cov=31/2	total_cov=37/21
RA	13	.	1	283537	0	C	A	bias_e_value=0.0137443	bias_p_value=6.51654e-09	consensus_reject=FREQUENCY_CUTOFF	consensus_score=225.0	fisher_strand_p_value=2.83529e-10	frequency=2.556e-01	ks_quality_p_value=1	major_base=C	major_cov=19/48	major_frequency=7.444e-01	minor_base=A	minor_cov=23/0	new_cov=23/0	polymorphism_frequency=2.556e-01	polymorphism_score=11.2	prediction=polymorphism	ref_cov=19/48	total_cov=42/48
RA	14	.	1	283561	0	T	A	bias_e_value=0.15122	bias_p_value=7.16973e-08	consensus_reject=FREQUENCY_CUTOFF	consensus_score=202.9	fisher_strand_p_value=3.5026e-09	frequency=2.375e-01	ks_quality_p_value=1	major_base=T	major_cov=16/45	major_frequency=7.625e-01	minor_base=A	minor_cov=19/0	new_cov=19/0	polymorphism_frequency=2.375e-01	polymorphism_score=10.2	prediction=polymorphism	ref_cov=16/45	total_cov=38/45
RA	15	.	1	382285	0	C	A	bias_e_value=0.00417317	bias_p_value=1.97861e-09	consensus_reject=FREQUENCY_CUTOFF	consensus_score=153.8	fisher_strand_p_value=8.28287e-11	frequency=3.467e-01	ks_quality_p_value=0.98595	major_base=C	major_cov=13/36	major_frequency=6.533e-01	minor_base=A	minor_cov=26/0	new_cov=26/0	polymorphism_frequency=3.467e-01	polymorphism_score=18.4	prediction=polymorphism	ref_cov=13/36	total_cov=39/36
RA	16	.	1	382321	0	G	A	bias_e_value=0.000335881	bias_p_value=1.5925e-10	consensus_reject=FREQUENCY_CUTOFF	consensus_score=108.2	fisher_strand_p_value=5.9309e-12	frequency=3.562e-01	ks_quality_p_value=1	major_base=G	major_cov=10/37	major_frequency=6.438e-01	minor_base=A	minor_cov=26/0	new_cov=26/0	polymorphism_frequency=3.562e-01	polymorphism_score=30.4	prediction=polymorphism	ref_cov=10/37	total_cov=36/37
RA	17	.	1	382372	0	G	A	bias_e_value=0.0359169	bias_p_value=1.70291e-08	consensus_reject=FREQUENCY_CUTOFF	consensus_score=161.2	fisher_strand_p_value=7.74812e-10	frequency=3.000e-01	ks_quality_p_value=1	major_base=G	major_cov=16/40	major_frequency=7.000e-01	minor_base=A	minor_cov=24/0	new_cov=24/0	polymorphism_frequency=3.000e-01	polymorphism_score=22.6	prediction=polymorphism	ref_cov=16/40	total_cov=40/40
RA	18	.	1	390416	0	G	A	bias_e_value=0.185003	bias_p_value=8.77148e-08	consensus_reject=FREQUENCY_CUTOFF	consensus_score=193.4	fisher_strand_p_value=4.36191e-09	frequency=2.317e-01	ks_quality_p_value=0.992671	major_base=G	major_cov=46/17	major_frequency=7.683e-01	minor_base=A	minor_cov=0/19	new_cov=0/19	polymorphism_frequency=2.317e-01	polymorphism_score=15.3	prediction=polymorphism	ref_cov=46/17	total_cov=46/36
RA	19	.	1	390467	0	T	C	bias_e_value=0.000483762	bias_p_value=2.29364e-10	consensus_reject=FREQUENCY_CUTOFF	consensus_score=152.7	fisher_strand_p_value=8.66449e-12	frequency=3.333e-01	ks_quality_p_value=1	major_base=T	major_cov=42/8	major_frequency=6.667e-01	minor_base=C	minor_cov=1/24	new_cov=1/24	polymorphism_frequency=3.333e-01	polymorphism_score=21.2	prediction=polymorphism	ref_cov=42/8	total_cov=43/32
RA	20	.	1	397244	0	C	T	bias_e_value=2.55971	bias_p_value=1.21363e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=132.7	fisher_strand_p_value=6.94169e-08	frequency=2.703e-01	ks_quality_p_value=1	major_base=C	major_cov=18/36	major_frequency=7.297e-01	minor_base=T	minor_cov=20/0	new_cov=20/0	polymorphism_frequency=2.703e-01	polymorphism_score=13.0	prediction=polymorphism	ref_cov=18/36	total_cov=38/36
RA	21	.	1	408427	0	A	T	bias_e_value=2.78827	bias_p_value=1.32199e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=193.0	fisher_strand_p_value=7.60097e-08	frequency=2.319e-01	ks_quality_p_value=1	major_base=A	major_cov=39/14	major_frequency=7.681e-01	minor_base=T	minor_cov=0/16	new_cov=0/16	polymorphism_frequency=2.319e-01	polymorphism_score=11.4	prediction=polymorphism	ref_cov=39/14	total_cov=39/31
RA	22	.	1	408456	0	C	T	bias_e_value=10.3443	bias_p_value=4.90448e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=150.3	fisher_strand_p_value=3.06572e-07	frequency=2.381e-01	ks_quality_p_value=1	major_base=C	major_cov=35/13	major_frequency=7.619e-01	minor_base=T	minor_cov=0/15	new_cov=0/15	polymorphism_frequency=2.381e-01	polymorphism_score=11.5	prediction=polymorphism	ref_cov=35/13	total_cov=35/29
RA	23	.	1	408486	0	A	T	bias_e_value=4.91917	bias_p_value=2.33231e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=160.2	fisher_strand_p_value=1.38915e-07	frequency=2.500e-01	ks_quality_p_value=1	major_base=A	major_cov=35/13	major_frequency=7.500e-01	minor_base=T	minor_cov=0/16	new_cov=0/16	polymorphism_frequency=2.500e-01	polymorphism_score=12.6	prediction=polymorphism	ref_cov=35/13	total_cov=35/29
RA	24	.	1	408500	0	T	G	bias_e_value=31.3027	bias_p_value=1.48414e-05	consensus_reject=FREQUENCY_CUTOFF	consensus_score=159.4	fisher_strand_p_value=1.00187e-06	frequency=2.121e-01	ks_quality_p_value=1	major_base=T	major_cov=37/15	major_frequency=7.879e-01	minor_base=G	minor_cov=0/14	new_cov=0/14	polymorphism_frequency=2.121e-01	polymorphism_score=12.4	prediction=polymorphism	ref_cov=37/15	total_cov=37/29
RA	25	.	1	408516	0	C	A	bias_e_value=0.00787673	bias_p_value=3.73456e-09	consensus_reject=FREQUENCY_CUTOFF	consensus_score=117.0	fisher_strand_p_value=1.58477e-10	frequency=3.214e-01	ks_quality_p_value=1	major_base=C	major_cov=33/5	major_frequency=6.786e-01	minor_base=A	minor_cov=0/18	new_cov=0/18	polymorphism_frequency=3.214e-01	polymorphism_score=13.8	prediction=polymorphism	ref_cov=33/5	total_cov=33/25
RA	26	.	1	419682	0	A	G	bias_e_value=0.000123544	bias_p_value=5.85752e-11	consensus_reject=FREQUENCY_CUTOFF	consensus_score=227.8	fisher_strand_p_value=2.1003e-12	frequency=2.418e-01	ks_quality_p_value=1	major_base=A	major_cov=13/56	major_frequency=7.582e-01	minor_base=G	minor_cov=22/0	new_cov=22/0	polymorphism_frequency=2.418e-01	polymorphism_score=10.9	prediction=polymorphism	ref_cov=13/56	total_cov=35/56
RA	27	.	1	419693	0	T	G	bias_e_value=8.81514e-06	bias_p_value=4.17949e-12	consensus_reject=FREQUENCY_CUTOFF	consensus_score=271.0	fisher_strand_p_value=1.36484e-13	frequency=2.500e-01	ks_quality_p_value=1	major_base=T	major_cov=13/59	major_frequency=7.500e-01	minor_base=G	minor_cov=24/0	new_cov=24/0	polymorphism_frequency=2.500e-01	polymorphism_score=10.5	prediction=polymorphism	ref_cov=13/59	total_cov=38/59
RA	28	.	1	461523	0	G	A	bias_e_value=0.0173662	bias_p_value=8.23376e-09	consensus_reject=FREQUENCY_CUTOFF	consensus_score=129.0	fisher_strand_p_value=3.62097e-10	frequency=3.016e-01	ks_quality_p_value=1	major_base=G	major_cov=36/8	major_frequency=6.984e-01	minor_base=A	minor_cov=0/19	new_cov=0/19	polymorphism_frequency=3.016e-01	polymorphism_score=16.5	prediction=polymorphism	ref_cov=36/8	total_cov=36/27
RA	29	.	1	461529	0	A	C	bias_e_value=0.000330988	bias_p_value=1.5693e-10	consensus_reject=FREQUENCY_CUTOFF	consensus_score=142.7	fisher_strand_p_value=5.8412e-12	frequency=3.485e-01	ks_quality_p_value=1	major_base=A	major_cov=36/7	major_frequency=6.515e-01	minor_base=C	minor_cov=0/23	new_cov=0/23	polymorphism_frequency=3.485e-01	polymorphism_score=13.0	prediction=polymorphism	ref_cov=36/7	total_cov=36/30
RA	30	.	1	483905	0	G	T	bias_e_value=0.0152813	bias_p_value=7.24527e-09	consensus_reject=FREQUENCY_CUTOFF	consensus_score=156.7	fisher_strand_p_value=3.21694e-10	frequency=3.167e-01	ks_quality_p_value=0.984672	major_base=G	major_cov=7/34	major_frequency=6.833e-01	minor_base=T	minor_cov=19/0	new_cov=19/0	polymorphism_frequency=3.167e-01	polymorphism_score=14.1	prediction=polymorphism	ref_cov=7/34	total_cov=26/34
RA	31	.	1	483913	0	A	T	bias_e_value=1.82207	bias_p_value=8.63889e-07	consensus_reject=FREQUENCY_CUTOFF	consensus_score=138.0	fisher_strand_p_value=4.84149e-08	frequency=2.712e-01	ks_quality_p_value=1	major_base=A	major_cov=10/33	major_frequency=7.288e-01	minor_base=T	minor_cov=16/0	new_cov=16/0	polymorphism_frequency=2.712e-01	polymorphism_score=13.0	prediction=polymorphism	ref_cov=10/33	total_cov=26/33
RA	32	.	1	487019	0	G	T	bias_e_value=6.01991	bias_p_value=2.8542e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=128.1	fisher_strand_p_value=1.72203e-07	frequency=2.857e-01	ks_quality_p_value=1	major_base=G	major_cov=7/28	major_frequency=7.143e-01	minor_base=T	minor_cov=14/0	new_cov=14/0	polymorphism_frequency=2.857e-01	polymorphism_score=13.9	prediction=polymorphism	ref_cov=7/28	total_cov=21/28
RA	33	.	1	490945	0	C	A	bias_e_value=20.0652	bias_p_value=9.51345e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=128.2	fisher_strand_p_value=6.34494e-07	frequency=3.478e-01	ks_quality_p_value=0.980625	major_base=C	major_cov=26/19	major_frequency=6.522e-01	minor_base=A	minor_cov=0/24	new_cov=0/24	polymorphism_frequency=3.478e-01	polymorphism_score=16.3	prediction=polymorphism	ref_cov=26/19	total_cov=26/43
RA	34	.	1	499425	0	C	T	bias_e_value=0.0290879	bias_p_value=1.37914e-08	consensus_reject=FREQUENCY_CUTOFF	consensus_score=182.3	fisher_strand_p_value=6.21252e-10	frequency=2.133e-01	ks_quality_p_value=1	major_base=C	major_cov=49/10	major_frequency=7.867e-01	minor_base=T	minor_cov=0/16	new_cov=0/16	polymorphism_frequency=2.133e-01	polymorphism_score=11.7	prediction=polymorphism	ref_cov=49/10	total_cov=49/26
RA	35	.	1	513432	0	T	G	bias_e_value=1.53032e-05	bias_p_value=7.25565e-12	consensus_reject=FREQUENCY_CUTOFF	consensus_score=275.3	fisher_strand_p_value=2.41435e-13	frequency=2.451e-01	ks_quality_p_value=1	major_base=T	major_cov=16/61	major_frequency=7.549e-01	minor_base=G	minor_cov=25/0	new_cov=25/0	polymorphism_frequency=2.451e-01	polymorphism_score=13.0	prediction=polymorphism	ref_cov=16/61	total_cov=41/61
RA	36	.	1	513510	0	T	G	bias_e_value=0.00123781	bias_p_value=5.86879e-10	consensus_reject=FREQUENCY_CUTOFF	consensus_score=336.0	fisher_strand_p_value=2.30197e-11	frequency=2.389e-01	ks_quality_p_value=1	major_base=T	major_cov=27/59	major_frequency=7.611e-01	minor_base=G	minor_cov=27/0	new_cov=27/0	polymorphism_frequency=2.389e-01	polymorphism_score=13.9	prediction=polymorphism	ref_cov=27/59	total_cov=54/59
RA	37	.	1	534003	0	G	A	bias_e_value=1.45301e-06	bias_p_value=6.8891e-13	consensus_reject=FREQUENCY_CUTOFF	consensus_score=87.1	fisher_strand_p_value=2.12074e-14	frequency=3.148e-01	ks_quality_p_value=1	major_base=G	major_cov=0/37	major_frequency=6.852e-01	minor_base=A	minor_cov=17/0	new_cov=17/0	polymorphism_frequency=3.148e-01	polymorphism_score=37.4	prediction=polymorphism	ref_cov=0/37	total_cov=17/37
RA	38	.	1	534006	0	C	A	bias_e_value=0.000857661	bias_p_value=4.0664e-10	consensus_reject=FREQUENCY_CUTOFF	consensus_score=150.7	fisher_strand_p_value=1.57147e-11	frequency=2.778e-01	ks_quality_p_value=1	major_base=C	major_cov=2/37	major_frequency=7.222e-01	minor_base=A	minor_cov=15/0	new_cov=15/0	polymorphism_frequency=2.778e-01	polymorphism_score=14.0	prediction=polymorphism	ref_cov=2/37	total_cov=17/37
RA	39	.	1	534042	0	G	T	bias_e_value=31.1887	bias_p_value=1.47874e-05	consensus_reject=FREQUENCY_CUTOFF	consensus_score=217.7	fisher_strand_p_value=9.97963e-07	frequency=2.174e-01	ks_quality_p_value=1	major_base=G	major_cov=17/37	major_frequency=7.826e-01	minor_base=T	minor_cov=15/0	new_cov=15/0	polymorphism_frequency=2.174e-01	polymorphism_score=15.1	prediction=polymorphism	ref_cov=17/37	total_cov=32/37
RA	40	.	1	584973	0	C	A	bias_e_value=1.52603	bias_p_value=7.23533e-07	consensus_reject=FREQUENCY_CUTOFF	consensus_score=192.7	fisher_strand_p_value=4.01266e-08	frequency=2.857e-01	ks_quality_p_value=1	major_base=C	major_cov=35/15	major_frequency=7.143e-01	minor_base=A	minor_cov=0/20	new_cov=0/20	polymorphism_frequency=2.857e-01	polymorphism_score=24.6	prediction=polymorphism	ref_cov=35/15	total_cov=35/35
RA	41	.	1	584993	0	G	A	bias_e_value=8.46412	bias_p_value=4.01306e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=160.6	fisher_strand_p_value=2.47541e-07	frequency=2.603e-01	ks_quality_p_value=1	major_base=G	major_cov=35/19	major_frequency=7.397e-01	minor_base=A	minor_cov=0/19	new_cov=0/19	polymorphism_frequency=2.603e-01	polymorphism_score=10.6	prediction=polymorphism	ref_cov=35/19	total_cov=35/38
RA	42	.	1	584997	0	G	A	bias_e_value=0.125034	bias_p_value=5.92821e-08	consensus_reject=FREQUENCY_CUTOFF	consensus_score=154.0	fisher_strand_p_value=2.86808e-09	frequency=3.151e-01	ks_quality_p_value=1	major_base=G	major_cov=35/15	major_frequency=6.849e-01	minor_base=A	minor_cov=0/23	new_cov=0/23	polymorphism_frequency=3.151e-01	polymorphism_score=18.2	prediction=polymorphism	ref_cov=35/15	total_cov=35/38
RA	43	.	1	617742	0	G	T	bias_e_value=9.40007e-05	bias_p_value=4.45682e-11	consensus_reject=FREQUENCY_CUTOFF	consensus_score=184.9	fisher_strand_p_value=1.58198e-12	frequency=3.247e-01	ks_quality_p_value=1	major_base=G	major_cov=10/42	major_frequency=6.753e-01	minor_base=T	minor_cov=25/0	new_cov=25/0	polymorphism_frequency=3.247e-01	polymorphism_score=17.8	prediction=polymorphism	ref_cov=10/42	total_cov=36/42
RA	44	.	1	651662	0	T	G	bias_e_value=1.5111e-10	bias_p_value=7.1645e-17	consensus_reject=FREQUENCY_CUTOFF	consensus_score=215.1	fisher_strand_p_value=1.70948e-18	frequency=3.592e-01	ks_quality_p_value=1	major_base=T	major_cov=11/55	major_frequency=6.408e-01	minor_base=G	minor_cov=37/0	new_cov=37/0	polymorphism_frequency=3.592e-01	polymorphism_score=21.6	prediction=polymorphism	ref_cov=11/55	total_cov=48/55
RA	45	.	1	651689	0	T	G	bias_e_value=0.108497	bias_p_value=5.14412e-08	consensus_reject=FREQUENCY_CUTOFF	consensus_score=251.2	fisher_strand_p_value=2.47092e-09	frequency=2.500e-01	ks_quality_p_value=1	major_base=T	major_cov=24/48	major_frequency=7.500e-01	minor_base=G	minor_cov=24/0	new_cov=24/0	polymorphism_frequency=2.500e-01	polymorphism_score=17.5	prediction=polymorphism	ref_cov=24/48	total_cov=48/48
RA	46	.	1	751555	0	A	T	bias_e_value=0.0116173	bias_p_value=5.50808e-09	consensus_reject=FREQUENCY_CUTOFF	consensus_score=141.9	fisher_strand_p_value=2.37833e-10	frequency=3.333e-01	ks_quality_p_value=1	major_base=A	major_cov=11/35	major_frequency=6.667e-01	minor_base=T	minor_cov=23/0	new_cov=23/0	polymorphism_frequency=3.333e-01	polymorphism_score=26.3	prediction=polymorphism	ref_cov=11/35	total_cov=34/35
RA	47	.	1	751574	0	C	T	bias_e_value=1.28357	bias_p_value=6.08572e-07	consensus_reject=FREQUENCY_CUTOFF	consensus_score=129.7	fisher_strand_p_value=3.34117e-08	frequency=2.857e-01	ks_quality_p_value=1	major_base=C	major_cov=12/33	major_frequency=7.143e-01	minor_base=T	minor_cov=18/0	new_cov=18/0	polymorphism_frequency=2.857e-01	polymorphism_score=12.6	prediction=polymorphism	ref_cov=12/33	total_cov=30/33
RA	48	.	1	776513	0	T	G	bias_e_value=0.0336151	bias_p_value=1.59378e-08	consensus_reject=FREQUENCY_CUTOFF	consensus_score=129.1	fisher_strand_p_value=7.22875e-10	frequency=2.982e-01	ks_quality_p_value=1	major_base=T	major_cov=6/34	major_frequency=7.018e-01	minor_base=G	minor_cov=17/0	new_cov=17/0	polymorphism_frequency=2.982e-01	polymorphism_score=11.2	prediction=polymorphism	ref_cov=6/34	total_cov=23/34
RA	49	.	1	776553	0	G	A	bias_e_value=1.28231	bias_p_value=6.07975e-07	consensus_reject=FREQUENCY_CUTOFF	consensus_score=172.1	fisher_strand_p_value=3.3377e-08	frequency=2.535e-01	ks_quality_p_value=1	major_base=G	major_cov=15/38	major_frequency=7.465e-01	minor_base=A	minor_cov=18/0	new_cov=18/0	polymorphism_frequency=2.535e-01	polymorphism_score=12.0	prediction=polymorphism	ref_cov=15/38	total_cov=33/38
RA	50	.	1	776568	0	G	A	bias_e_value=0.750882	bias_p_value=3.56013e-07	consensus_reject=FREQUENCY_CUTOFF	consensus_score=179.5	fisher_strand_p_value=1.89559e-08	frequency=2.568e-01	ks_quality_p_value=1	major_base=G	major_cov=16/39	major_frequency=7.432e-01	minor_base=A	minor_cov=19/0	new_cov=19/0	polymorphism_frequency=2.568e-01	polymorphism_score=15.7	prediction=polymorphism	ref_cov=16/39	total_cov=35/39
RA	51	.	1	787743	0	G	A	bias_e_value=0.545836	bias_p_value=2.58795e-07	consensus_reject=FREQUENCY_CUTOFF	consensus_score=79.9	fisher_strand_p_value=1.35368e-08	frequency=3.404e-01	ks_quality_p_value=1	major_base=G	major_cov=5/26	major_frequency=6.596e-01	minor_base=A	minor_cov=16/0	new_cov=16/0	polymorphism_frequency=3.404e-01	polymorphism_score=19.1	prediction=polymorphism	ref_cov=5/26	total_cov=21/26
RA	52	.	1	793823	0	C	T	bias_e_value=0.00441512	bias_p_value=2.09333e-09	consensus_reject=FREQUENCY_CUTOFF	consensus_score=113.2	fisher_strand_p_value=8.66098e-11	frequency=3.167e-01	ks_quality_p_value=1	major_base=C	major_cov=6/35	major_frequency=6.833e-01	minor_base=T	minor_cov=19/0	new_cov=19/0	polymorphism_frequency=3.167e-01	polymorphism_score=16.6	prediction=polymorphism	ref_cov=6/35	total_cov=26/35
RA	53	.	1	793835	0	T	G	bias_e_value=0.0513314	bias_p_value=2.43376e-08	consensus_reject=FREQUENCY_CUTOFF	consensus_score=154.1	fisher_strand_p_value=1.12652e-09	frequency=3.016e-01	ks_quality_p_value=1	major_base=T	major_cov=9/35	major_frequency=6.984e-01	minor_base=G	minor_cov=19/0	new_cov=19/0	polymorphism_frequency=3.016e-01	polymorphism_score=11.9	prediction=polymorphism	ref_cov=9/35	total_cov=28/35
RA	54	.	1	793851	0	A	C	bias_e_value=0.256861	bias_p_value=1.21785e-07	consensus_reject=FREQUENCY_CUTOFF	consensus_score=170.5	fisher_strand_p_value=6.11604e-09	frequency=2.656e-01	ks_quality_p_value=1	major_base=A	major_cov=10/37	major_frequency=7.344e-01	minor_base=C	minor_cov=17/0	new_cov=17/0	polymorphism_frequency=2.656e-01	polymorphism_score=10.5	prediction=polymorphism	ref_cov=10/37	total_cov=28/37
RA	55	.	1	793861	0	C	T	bias_e_value=0.813398	bias_p_value=3.85653e-07	consensus_reject=FREQUENCY_CUTOFF	consensus_score=151.4	fisher_strand_p_value=2.06268e-08	frequency=2.576e-01	ks_quality_p_value=1	major_base=C	major_cov=12/37	major_frequency=7.424e-01	minor_base=T	minor_cov=17/0	new_cov=17/0	polymorphism_frequency=2.576e-01	polymorphism_score=15.7	prediction=polymorphism	ref_cov=12/37	total_cov=29/37
RA	56	.	1	834213	0	A	G	bias_e_value=14403.9	bias_p_value=0.00682927	consensus_reject=FREQUENCY_CUTOFF	consensus_score=96.5	fisher_strand_p_value=0.000845693	frequency=2.456e-01	ks_quality_p_value=1	major_base=A	major_cov=22/21	major_frequency=7.544e-01	minor_base=G	minor_cov=14/0	new_cov=14/0	polymorphism_frequency=2.456e-01	polymorphism_score=10.8	prediction=polymorphism	ref_cov=22/21	total_cov=36/21
RA	57	.	1	861598	1	.	T	consensus_score=128.7	frequency=1	major_base=T	major_cov=11/22	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=11/22	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=11/22
RA	58	.	1	891069	0	G	A	bias_e_value=0.0162412	bias_p_value=7.70037e-09	consensus_reject=FREQUENCY_CUTOFF	consensus_score=120.0	fisher_strand_p_value=3.376e-10	frequency=3.226e-01	ks_quality_p_value=1	major_base=G	major_cov=8/34	major_frequency=6.774e-01	minor_base=A	minor_cov=20/0	new_cov=20/0	polymorphism_frequency=3.226e-01	polymorphism_score=18.2	prediction=polymorphism	ref_cov=8/34	total_cov=28/34
RA	59	.	1	909942	0	T	G	bias_e_value=0.167389	bias_p_value=7.93634e-08	consensus_reject=FREQUENCY_CUTOFF	consensus_score=155.3	fisher_strand_p_value=3.89744e-09	frequency=2.881e-01	ks_quality_p_value=1	major_base=T	major_cov=8/34	major_frequency=7.119e-01	minor_base=G	minor_cov=17/0	new_cov=17/0	polymorphism_frequency=2.881e-01	polymorphism_score=10.7	prediction=polymorphism	ref_cov=8/34	total_cov=26/34
RA	60	.	1	917027	0	C	T	bias_e_value=0.0176816	bias_p_value=8.38333e-09	consensus_reject=FREQUENCY_CUTOFF	consensus_score=179.3	fisher_strand_p_value=3.6898e-10	frequency=2.500e-01	ks_quality_p_value=1	major_base=C	major_cov=12/45	major_frequency=7.500e-01	minor_base=T	minor_cov=19/0	new_cov=19/0	polymorphism_frequency=2.500e-01	polymorphism_score=11.8	prediction=polymorphism	ref_cov=12/45	total_cov=31/45
RA	61	.	1	960047	0	C	T	bias_e_value=0.0136555	bias_p_value=6.47442e-09	consensus_reject=FREQUENCY_CUTOFF	consensus_score=63.4	fisher_strand_p_value=7.8855e-10	frequency=3.462e-01	ks_quality_p_value=0.357127	major_base=C	major_cov=29/5	major_frequency=6.538e-01	minor_base=T	minor_cov=0/18	new_cov=0/18	polymorphism_frequency=3.462e-01	polymorphism_score=15.2	prediction=polymorphism	ref_cov=29/5	total_cov=29/23
RA	62	.	1	1047106	0	G	A	bias_e_value=0.0024323	bias_p_value=1.15322e-09	consensus_reject=FREQUENCY_CUTOFF	consensus_score=102.0	fisher_strand_p_value=4.65172e-11	frequency=3.803e-01	ks_quality_p_value=1	major_base=G	major_cov=33/11	major_frequency=6.197e-01	minor_base=A	minor_cov=0/27	new_cov=0/27	polymorphism_frequency=3.803e-01	polymorphism_score=28.5	prediction=polymorphism	ref_cov=33/11	total_cov=33/38
RA	63	.	1	1047119	0	C	A	bias_e_value=30.9717	bias_p_value=1.46845e-05	consensus_reject=FREQUENCY_CUTOFF	consensus_score=174.4	fisher_strand_p_value=1.09047e-06	frequency=2.603e-01	ks_quality_p_value=0.908345	major_base=C	major_cov=33/21	major_frequency=7.397e-01	minor_base=A	minor_cov=0/19	new_cov=0/19	polymorphism_frequency=2.603e-01	polymorphism_score=10.9	prediction=polymorphism	ref_cov=33/21	total_cov=33/41
RA	64	.	1	1073757	0	G	A	bias_e_value=8507.71	bias_p_value=0.00403373	consensus_reject=FREQUENCY_CUTOFF	consensus_score=64.3	fisher_strand_p_value=0.000465073	frequency=3.095e-01	ks_quality_p_value=1	major_base=G	major_cov=13/16	major_frequency=6.905e-01	minor_base=A	minor_cov=13/0	new_cov=13/0	polymorphism_frequency=3.095e-01	polymorphism_score=10.4	prediction=polymorphism	ref_cov=13/16	total_cov=28/16
RA	65	.	1	1073761	0	C	A	bias_e_value=54.4646	bias_p_value=2.58231e-05	consensus_reject=FREQUENCY_CUTOFF	consensus_score=94.2	fisher_strand_p_value=1.81612e-06	frequency=3.673e-01	ks_quality_p_value=1	major_base=C	major_cov=10/21	major_frequency=6.327e-01	minor_base=A	minor_cov=18/0	new_cov=18/0	polymorphism_frequency=3.673e-01	polymorphism_score=12.5	prediction=polymorphism	ref_cov=10/21	total_cov=28/21
RA	66	.	1	1073777	0	G	A	bias_e_value=6789.34	bias_p_value=0.003219	consensus_reject=FREQUENCY_CUTOFF	consensus_score=85.6	fisher_strand_p_value=0.000360557	frequency=2.391e-01	ks_quality_p_value=1	major_base=G	major_cov=14/21	major_frequency=7.609e-01	minor_base=A	minor_cov=11/0	new_cov=11/0	polymorphism_frequency=2.391e-01	polymorphism_score=11.2	prediction=polymorphism	ref_cov=14/21	total_cov=25/21
RA	67	.	1	1073810	0	T	G	bias_e_value=4.32332	bias_p_value=2.0498e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=109.0	fisher_strand_p_value=1.21099e-07	frequency=3.462e-01	ks_quality_p_value=1	major_base=T	major_cov=9/25	major_frequency=6.538e-01	minor_base=G	minor_cov=18/0	new_cov=18/0	polymorphism_frequency=3.462e-01	polymorphism_score=11.0	prediction=polymorphism	ref_cov=9/25	total_cov=30/25
RA	68	.	1	1107409	0	G	C	bias_e_value=45880.7	bias_p_value=0.0217533	consensus_reject=FREQUENCY_CUTOFF	consensus_score=74.3	fisher_strand_p_value=0.00485855	frequency=2.368e-01	ks_quality_p_value=0.664747	major_base=G	major_cov=13/16	major_frequency=7.632e-01	minor_base=C	minor_cov=9/0	new_cov=9/0	polymorphism_frequency=2.368e-01	polymorphism_score=13.7	prediction=polymorphism	ref_cov=13/16	total_cov=23/16
RA	69	.	1	1107417	0	T	A	bias_e_value=1140.27	bias_p_value=0.000540632	consensus_reject=FREQUENCY_CUTOFF	consensus_score=52.4	fisher_strand_p_value=4.95415e-05	frequency=3.611e-01	ks_quality_p_value=1	major_base=T	major_cov=7/16	major_frequency=6.389e-01	minor_base=A	minor_cov=13/0	new_cov=13/0	polymorphism_frequency=3.611e-01	polymorphism_score=11.2	prediction=polymorphism	ref_cov=7/16	total_cov=21/16
RA	70	.	1	1107460	0	G	A	bias_e_value=33.9015	bias_p_value=1.60736e-05	consensus_reject=FREQUENCY_CUTOFF	consensus_score=68.6	fisher_strand_p_value=1.09136e-06	frequency=3.778e-01	ks_quality_p_value=1	major_base=G	major_cov=8/20	major_frequency=6.222e-01	minor_base=A	minor_cov=17/0	new_cov=17/0	polymorphism_frequency=3.778e-01	polymorphism_score=15.5	prediction=polymorphism	ref_cov=8/20	total_cov=25/20
RA	71	.	1	1147516	0	C	T	bias_e_value=6.06479e-09	bias_p_value=2.87547e-15	consensus_reject=FREQUENCY_CUTOFF	consensus_score=19.3	fisher_strand_p_value=9.64173e-10	frequency=5.455e-01	ks_quality_p_value=7.82281e-08	major_base=T	major_cov=18/0	major_frequency=5.455e-01	minor_base=C	minor_cov=0/15	new_cov=18/0	polymorphism_frequency=5.455e-01	polymorphism_score=48.5	prediction=polymorphism	ref_cov=0/15	total_cov=18/15
RA	72	.	1	1147522	0	G	A	bias_e_value=1.65655e-08	bias_p_value=7.85413e-15	consensus_reject=FREQUENCY_CUTOFF	consensus_score=20.3	fisher_strand_p_value=1.76765e-09	frequency=5.312e-01	ks_quality_p_value=1.19793e-07	major_base=A	major_cov=17/0	major_frequency=5.312e-01	minor_base=G	minor_cov=0/15	new_cov=17/0	polymorphism_frequency=5.312e-01	polymorphism_score=46.4	prediction=polymorphism	ref_cov=0/15	total_cov=17/15
RA	73	.	1	1147527	0	T	G	bias_e_value=2.11022	bias_p_value=1.00051e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=38.5	fisher_strand_p_value=5.65648e-08	frequency=4.839e-01	ks_quality_p_value=1	major_base=T	major_cov=1/15	major_frequency=5.161e-01	minor_base=G	minor_cov=15/0	new_cov=15/0	polymorphism_frequency=4.839e-01	polymorphism_score=13.6	prediction=polymorphism	ref_cov=1/15	total_cov=16/15
RA	74	.	1	1160777	0	G	A	bias_e_value=20.88	bias_p_value=9.89974e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=122.9	fisher_strand_p_value=6.49273e-07	frequency=2.727e-01	ks_quality_p_value=1	major_base=G	major_cov=11/29	major_frequency=7.273e-01	minor_base=A	minor_cov=15/0	new_cov=15/0	polymorphism_frequency=2.727e-01	polymorphism_score=11.5	prediction=polymorphism	ref_cov=11/29	total_cov=26/29
RA	75	.	1	1192160	0	A	T	bias_e_value=72.2666	bias_p_value=3.42635e-05	consensus_reject=FREQUENCY_CUTOFF	consensus_score=132.0	fisher_strand_p_value=2.46246e-06	frequency=2.667e-01	ks_quality_p_value=1	major_base=A	major_cov=15/29	major_frequency=7.333e-01	minor_base=T	minor_cov=16/0	new_cov=16/0	polymorphism_frequency=2.667e-01	polymorphism_score=12.8	prediction=polymorphism	ref_cov=15/29	total_cov=31/29
RA	76	.	1	1192164	0	C	T	bias_e_value=0.361812	bias_p_value=1.71545e-07	consensus_reject=FREQUENCY_CUTOFF	consensus_score=94.6	fisher_strand_p_value=8.774e-09	frequency=3.559e-01	ks_quality_p_value=1	major_base=C	major_cov=10/28	major_frequency=6.441e-01	minor_base=T	minor_cov=21/0	new_cov=21/0	polymorphism_frequency=3.559e-01	polymorphism_score=17.4	prediction=polymorphism	ref_cov=10/28	total_cov=31/28
RA	77	.	1	1192174	0	A	T	bias_e_value=160.552	bias_p_value=7.61218e-05	consensus_reject=FREQUENCY_CUTOFF	consensus_score=142.9	fisher_strand_p_value=5.83213e-06	frequency=2.500e-01	ks_quality_p_value=1	major_base=A	major_cov=15/30	major_frequency=7.500e-01	minor_base=T	minor_cov=15/0	new_cov=15/0	polymorphism_frequency=2.500e-01	polymorphism_score=10.6	prediction=polymorphism	ref_cov=15/30	total_cov=30/30
RA	78	.	1	1192182	0	T	A	bias_e_value=0.515995	bias_p_value=2.44647e-07	consensus_reject=FREQUENCY_CUTOFF	consensus_score=137.0	fisher_strand_p_value=1.27572e-08	frequency=3.065e-01	ks_quality_p_value=1	major_base=T	major_cov=11/32	major_frequency=6.935e-01	minor_base=A	minor_cov=19/0	new_cov=19/0	polymorphism_frequency=3.065e-01	polymorphism_score=13.3	prediction=polymorphism	ref_cov=11/32	total_cov=30/32
RA	79	.	1	1213737	0	T	G	bias_e_value=0.0162642	bias_p_value=7.71128e-09	consensus_reject=FREQUENCY_CUTOFF	consensus_score=174.8	fisher_strand_p_value=3.381e-10	frequency=3.542e-01	ks_quality_p_value=1	major_base=T	major_cov=25/37	major_frequency=6.458e-01	minor_base=G	minor_cov=34/0	new_cov=34/0	polymorphism_frequency=3.542e-01	polymorphism_score=21.6	prediction=polymorphism	ref_cov=25/37	total_cov=60/37
RA	80	.	1	1226853	0	C	T	bias_e_value=0.0240138	bias_p_value=1.13856e-08	consensus_reject=FREQUENCY_CUTOFF	consensus_score=55.1	fisher_strand_p_value=1.78281e-09	frequency=3.333e-01	ks_quality_p_value=0.285104	major_base=C	major_cov=5/29	major_frequency=6.667e-01	minor_base=T	minor_cov=17/0	new_cov=17/0	polymorphism_frequency=3.333e-01	polymorphism_score=12.8	prediction=polymorphism	ref_cov=5/29	total_cov=22/29
RA	81	.	1	1226868	0	G	T	bias_e_value=0.00914742	bias_p_value=4.33703e-09	consensus_reject=FREQUENCY_CUTOFF	consensus_score=70.8	fisher_strand_p_value=3.82756e-10	frequency=3.023e-01	ks_quality_p_value=0.484043	major_base=G	major_cov=1/29	major_frequency=6.977e-01	minor_base=T	minor_cov=13/0	new_cov=13/0	polymorphism_frequency=3.023e-01	polymorphism_score=20.5	prediction=polymorphism	ref_cov=1/29	total_cov=14/29
RA	82	.	1	1226987	0	A	C	bias_e_value=17220.4	bias_p_value=0.00816462	consensus_reject=FREQUENCY_CUTOFF	consensus_score=103.8	fisher_strand_p_value=0.00103728	frequency=4.028e-01	ks_quality_p_value=1	major_base=A	major_cov=23/20	major_frequency=5.972e-01	minor_base=C	minor_cov=4/25	new_cov=4/25	polymorphism_frequency=4.028e-01	polymorphism_score=13.9	prediction=polymorphism	ref_cov=23/20	total_cov=27/45
RA	83	.	1	1231365	0	C	A	bias_e_value=70.9875	bias_p_value=3.3657e-05	consensus_reject=FREQUENCY_CUTOFF	consensus_score=180.6	fisher_strand_p_value=2.41553e-06	frequency=2.034e-01	ks_quality_p_value=1	major_base=C	major_cov=35/12	major_frequency=7.966e-01	minor_base=A	minor_cov=0/12	new_cov=0/12	polymorphism_frequency=2.034e-01	polymorphism_score=11.0	prediction=polymorphism	ref_cov=35/12	total_cov=35/24
RA	84	.	1	1231469	0	C	G	bias_e_value=21.505	bias_p_value=1.01961e-05	consensus_reject=FREQUENCY_CUTOFF	consensus_score=105.9	fisher_strand_p_value=8.80199e-07	frequency=2.727e-01	ks_quality_p_value=0.7613	major_base=C	major_cov=26/6	major_frequency=7.273e-01	minor_base=G	minor_cov=0/12	new_cov=0/12	polymorphism_frequency=2.727e-01	polymorphism_score=11.7	prediction=polymorphism	ref_cov=26/6	total_cov=26/20
RA	85	.	1	1233866	0	T	G	bias_e_value=5.71728e-07	bias_p_value=2.71071e-13	consensus_reject=FREQUENCY_CUTOFF	consensus_score=150.7	fisher_strand_p_value=8.10466e-15	frequency=4.396e-01	ks_quality_p_value=1	major_base=T	major_cov=13/38	major_frequency=5.604e-01	minor_base=G	minor_cov=40/0	new_cov=40/0	polymorphism_frequency=4.396e-01	polymorphism_score=17.8	prediction=polymorphism	ref_cov=13/38	total_cov=53/38
RA	86	.	1	1241324	0	G	A	bias_e_value=45.3968	bias_p_value=2.15238e-05	consensus_reject=FREQUENCY_CUTOFF	consensus_score=91.0	fisher_strand_p_value=1.49319e-06	frequency=2.955e-01	ks_quality_p_value=1	major_base=G	major_cov=24/7	major_frequency=7.045e-01	minor_base=A	minor_cov=0/13	new_cov=0/13	polymorphism_frequency=2.955e-01	polymorphism_score=12.2	prediction=polymorphism	ref_cov=24/7	total_cov=24/21
RA	87	.	1	1275683	0	T	G	bias_e_value=2268.49	bias_p_value=0.00107555	consensus_reject=FREQUENCY_CUTOFF	consensus_score=42.2	fisher_strand_p_value=0.000105938	frequency=5.000e-01	ks_quality_p_value=1	major_base=T	major_cov=7/11	major_frequency=5.000e-01	minor_base=G	minor_cov=18/0	new_cov=18/0	polymorphism_frequency=5.000e-01	polymorphism_score=15.4	prediction=polymorphism	ref_cov=7/11	total_cov=25/11
RA	88	.	1	1300811	0	G	T	bias_e_value=2.30112	bias_p_value=1.09102e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=65.5	fisher_strand_p_value=6.20037e-08	frequency=3.333e-01	ks_quality_p_value=1	major_base=G	major_cov=1/21	major_frequency=6.667e-01	minor_base=T	minor_cov=11/0	new_cov=11/0	polymorphism_frequency=3.333e-01	polymorphism_score=21.3	prediction=polymorphism	ref_cov=1/21	total_cov=12/21
RA	89	.	1	1302201	0	C	A	bias_e_value=1063.75	bias_p_value=0.000504353	consensus_reject=FREQUENCY_CUTOFF	consensus_score=105.6	fisher_strand_p_value=4.58956e-05	frequency=3.095e-01	ks_quality_p_value=1	major_base=C	major_cov=19/10	major_frequency=6.905e-01	minor_base=A	minor_cov=0/13	new_cov=0/13	polymorphism_frequency=3.095e-01	polymorphism_score=11.5	prediction=polymorphism	ref_cov=19/10	total_cov=19/23
RA	90	.	1	1381195	0	G	A	bias_e_value=5.68139	bias_p_value=2.6937e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=130.1	fisher_strand_p_value=1.61918e-07	frequency=2.742e-01	ks_quality_p_value=1	major_base=G	major_cov=13/32	major_frequency=7.258e-01	minor_base=A	minor_cov=17/0	new_cov=17/0	polymorphism_frequency=2.742e-01	polymorphism_score=15.1	prediction=polymorphism	ref_cov=13/32	total_cov=30/32
RA	91	.	1	1482294	0	T	G	bias_e_value=1.14364e-06	bias_p_value=5.42231e-13	consensus_reject=FREQUENCY_CUTOFF	consensus_score=137.9	fisher_strand_p_value=1.65661e-14	frequency=3.939e-01	ks_quality_p_value=1	major_base=T	major_cov=4/36	major_frequency=6.061e-01	minor_base=G	minor_cov=26/0	new_cov=26/0	polymorphism_frequency=3.939e-01	polymorphism_score=16.1	prediction=polymorphism	ref_cov=4/36	total_cov=30/36
RA	92	.	1	1534332	0	C	T	bias_e_value=0.301415	bias_p_value=1.42909e-07	consensus_reject=FREQUENCY_CUTOFF	consensus_score=120.6	fisher_strand_p_value=7.23811e-09	frequency=3.051e-01	ks_quality_p_value=1	major_base=C	major_cov=32/9	major_frequency=6.949e-01	minor_base=T	minor_cov=0/18	new_cov=0/18	polymorphism_frequency=3.051e-01	polymorphism_score=13.0	prediction=polymorphism	ref_cov=32/9	total_cov=32/27
RA	93	.	1	1534347	0	G	A	bias_e_value=0.409628	bias_p_value=1.94215e-07	consensus_reject=FREQUENCY_CUTOFF	consensus_score=101.9	fisher_strand_p_value=1.00005e-08	frequency=2.951e-01	ks_quality_p_value=1	major_base=G	major_cov=33/10	major_frequency=7.049e-01	minor_base=A	minor_cov=0/18	new_cov=0/18	polymorphism_frequency=2.951e-01	polymorphism_score=12.6	prediction=polymorphism	ref_cov=33/10	total_cov=33/28
RA	94	.	1	1591898	0	C	T	bias_e_value=0.00570691	bias_p_value=2.70579e-09	consensus_reject=FREQUENCY_CUTOFF	consensus_score=93.4	fisher_strand_p_value=1.13205e-10	frequency=3.396e-01	ks_quality_p_value=1	major_base=C	major_cov=31/4	major_frequency=6.604e-01	minor_base=T	minor_cov=0/18	new_cov=0/18	polymorphism_frequency=3.396e-01	polymorphism_score=16.8	prediction=polymorphism	ref_cov=31/4	total_cov=31/22
RA	95	.	1	1674536	0	C	T	bias_e_value=14.9307	bias_p_value=7.07906e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=117.3	fisher_strand_p_value=4.5361e-07	frequency=2.667e-01	ks_quality_p_value=1	major_base=C	major_cov=31/13	major_frequency=7.333e-01	minor_base=T	minor_cov=0/16	new_cov=0/16	polymorphism_frequency=2.667e-01	polymorphism_score=14.9	prediction=polymorphism	ref_cov=31/13	total_cov=31/29
RA	96	.	1	1685984	0	G	T	bias_e_value=119.174	bias_p_value=5.65035e-05	consensus_reject=FREQUENCY_CUTOFF	consensus_score=129.2	fisher_strand_p_value=4.2247e-06	frequency=3.091e-01	ks_quality_p_value=1	major_base=G	major_cov=24/14	major_frequency=6.909e-01	minor_base=T	minor_cov=0/17	new_cov=0/17	polymorphism_frequency=3.091e-01	polymorphism_score=10.4	prediction=polymorphism	ref_cov=24/14	total_cov=24/31
RA	97	.	1	1709179	0	A	C	bias_e_value=0.000379888	bias_p_value=1.80115e-10	consensus_reject=FREQUENCY_CUTOFF	consensus_score=89.6	fisher_strand_p_value=6.74009e-12	frequency=3.913e-01	ks_quality_p_value=1	major_base=A	major_cov=27/1	major_frequency=6.087e-01	minor_base=C	minor_cov=0/18	new_cov=0/18	polymorphism_frequency=3.913e-01	polymorphism_score=12.7	prediction=polymorphism	ref_cov=27/1	total_cov=27/19
RA	98	.	1	1713856	0	G	A	bias_e_value=0.00868054	bias_p_value=4.11567e-09	consensus_reject=FREQUENCY_CUTOFF	consensus_score=84.1	fisher_strand_p_value=1.75404e-10	frequency=3.469e-01	ks_quality_p_value=1	major_base=G	major_cov=3/29	major_frequency=6.531e-01	minor_base=A	minor_cov=17/0	new_cov=17/0	polymorphism_frequency=3.469e-01	polymorphism_score=19.2	prediction=polymorphism	ref_cov=3/29	total_cov=20/29
RA	99	.	1	1729669	0	G	T	bias_e_value=30855.2	bias_p_value=0.0146293	consensus_reject=FREQUENCY_CUTOFF	consensus_score=112.5	fisher_strand_p_value=0.00203223	frequency=2.500e-01	ks_quality_p_value=1	major_base=G	major_cov=13/17	major_frequency=7.500e-01	minor_base=T	minor_cov=10/0	new_cov=10/0	polymorphism_frequency=2.500e-01	polymorphism_score=10.3	prediction=polymorphism	ref_cov=13/17	total_cov=23/17
RA	100	.	1	1815808	0	G	T	bias_e_value=1.51075	bias_p_value=7.16285e-07	consensus_reject=FREQUENCY_CUTOFF	consensus_score=162.9	fisher_strand_p_value=4.15575e-08	frequency=2.456e-01	ks_quality_p_value=0.955333	major_base=G	major_cov=8/35	major_frequency=7.544e-01	minor_base=T	minor_cov=14/0	new_cov=14/0	polymorphism_frequency=2.456e-01	polymorphism_score=11.5	prediction=polymorphism	ref_cov=8/35	total_cov=22/35
RA	101	.	1	1822647	0	C	T	bias_e_value=0.004076	bias_p_value=1.93254e-09	consensus_reject=FREQUENCY_CUTOFF	consensus_score=157.4	fisher_strand_p_value=7.96825e-11	frequency=2.676e-01	ks_quality_p_value=1	major_base=C	major_cov=9/43	major_frequency=7.324e-01	minor_base=T	minor_cov=19/0	new_cov=19/0	polymorphism_frequency=2.676e-01	polymorphism_score=12.3	prediction=polymorphism	ref_cov=9/43	total_cov=29/43
RA	102	.	1	1822680	0	T	A	bias_e_value=0.12843	bias_p_value=6.0892e-08	consensus_reject=FREQUENCY_CUTOFF	consensus_score=173.8	fisher_strand_p_value=2.94999e-09	frequency=2.639e-01	ks_quality_p_value=1	major_base=T	major_cov=13/40	major_frequency=7.361e-01	minor_base=A	minor_cov=19/0	new_cov=19/0	polymorphism_frequency=2.639e-01	polymorphism_score=13.3	prediction=polymorphism	ref_cov=13/40	total_cov=32/40
RA	103	.	1	1822693	0	G	A	bias_e_value=2.11759	bias_p_value=1.004e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=195.7	fisher_strand_p_value=5.67741e-08	frequency=2.152e-01	ks_quality_p_value=1	major_base=G	major_cov=18/44	major_frequency=7.848e-01	minor_base=A	minor_cov=17/0	new_cov=17/0	polymorphism_frequency=2.152e-01	polymorphism_score=13.1	prediction=polymorphism	ref_cov=18/44	total_cov=35/44
RA	104	.	1	1822714	0	C	T	bias_e_value=4.01915	bias_p_value=1.90558e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=166.6	fisher_strand_p_value=1.12066e-07	frequency=2.778e-01	ks_quality_p_value=1	major_base=C	major_cov=18/34	major_frequency=7.222e-01	minor_base=T	minor_cov=20/0	new_cov=20/0	polymorphism_frequency=2.778e-01	polymorphism_score=15.8	prediction=polymorphism	ref_cov=18/34	total_cov=38/34
RA	105	.	1	1822728	0	G	A	bias_e_value=20.5644	bias_p_value=9.75012e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=185.0	fisher_strand_p_value=6.38778e-07	frequency=2.368e-01	ks_quality_p_value=1	major_base=G	major_cov=21/37	major_frequency=7.632e-01	minor_base=A	minor_cov=18/0	new_cov=18/0	polymorphism_frequency=2.368e-01	polymorphism_score=13.8	prediction=polymorphism	ref_cov=21/37	total_cov=39/37
RA	106	.	1	1866526	0	T	G	bias_e_value=3.20735	bias_p_value=1.52069e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=66.4	fisher_strand_p_value=8.81875e-08	frequency=4.048e-01	ks_quality_p_value=1	major_base=T	major_cov=3/22	major_frequency=5.952e-01	minor_base=G	minor_cov=16/1	new_cov=16/1	polymorphism_frequency=4.048e-01	polymorphism_score=12.0	prediction=polymorphism	ref_cov=3/22	total_cov=19/23
RA	107	.	1	1885603	0	C	T	bias_e_value=2.37778	bias_p_value=1.12737e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=207.4	fisher_strand_p_value=6.41962e-08	frequency=2.278e-01	ks_quality_p_value=1	major_base=C	major_cov=19/42	major_frequency=7.722e-01	minor_base=T	minor_cov=18/0	new_cov=18/0	polymorphism_frequency=2.278e-01	polymorphism_score=13.3	prediction=polymorphism	ref_cov=19/42	total_cov=37/42
RA	108	.	1	1907146	0	A	T	bias_e_value=15.9704	bias_p_value=7.57199e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=138.5	fisher_strand_p_value=4.87444e-07	frequency=2.500e-01	ks_quality_p_value=1	major_base=A	major_cov=7/35	major_frequency=7.500e-01	minor_base=T	minor_cov=13/1	new_cov=13/1	polymorphism_frequency=2.500e-01	polymorphism_score=13.5	prediction=polymorphism	ref_cov=7/35	total_cov=20/36
RA	109	.	1	1910059	0	C	T	bias_e_value=14.3715	bias_p_value=6.81389e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=61.2	fisher_strand_p_value=4.35481e-07	frequency=4.151e-01	ks_quality_p_value=1	major_base=C	major_cov=11/20	major_frequency=5.849e-01	minor_base=T	minor_cov=22/0	new_cov=22/0	polymorphism_frequency=4.151e-01	polymorphism_score=22.7	prediction=polymorphism	ref_cov=11/20	total_cov=34/20
RA	110	.	1	1910092	0	C	G	bias_e_value=1983.88	bias_p_value=0.000940609	consensus_reject=FREQUENCY_CUTOFF	consensus_score=136.1	fisher_strand_p_value=9.13102e-05	frequency=2.857e-01	ks_quality_p_value=1	major_base=C	major_cov=23/22	major_frequency=7.143e-01	minor_base=G	minor_cov=18/0	new_cov=18/0	polymorphism_frequency=2.857e-01	polymorphism_score=11.7	prediction=polymorphism	ref_cov=23/22	total_cov=41/22
RA	111	.	1	1910121	0	T	G	bias_e_value=1.25196	bias_p_value=5.93586e-07	consensus_reject=FREQUENCY_CUTOFF	consensus_score=124.3	fisher_strand_p_value=3.25418e-08	frequency=4.462e-01	ks_quality_p_value=1	major_base=T	major_cov=14/22	major_frequency=5.538e-01	minor_base=G	minor_cov=29/0	new_cov=29/0	polymorphism_frequency=4.462e-01	polymorphism_score=11.8	prediction=polymorphism	ref_cov=14/22	total_cov=43/22
RA	112	.	1	1914232	0	G	C	bias_e_value=19.546	bias_p_value=9.26729e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=101.6	fisher_strand_p_value=6.04992e-07	frequency=2.632e-01	ks_quality_p_value=1	major_base=G	major_cov=25/3	major_frequency=7.368e-01	minor_base=C	minor_cov=0/10	new_cov=0/10	polymorphism_frequency=2.632e-01	polymorphism_score=10.2	prediction=polymorphism	ref_cov=25/3	total_cov=25/13
RA	113	.	1	1937748	0	T	A	bias_e_value=3.97292e-08	bias_p_value=1.88366e-14	consensus_reject=FREQUENCY_CUTOFF	consensus_score=122.1	fisher_strand_p_value=5.20467e-16	frequency=3.636e-01	ks_quality_p_value=1	major_base=T	major_cov=2/40	major_frequency=6.364e-01	minor_base=A	minor_cov=24/0	new_cov=24/0	polymorphism_frequency=3.636e-01	polymorphism_score=27.7	prediction=polymorphism	ref_cov=2/40	total_cov=26/40
RA	114	.	1	1938508	0	T	G	bias_e_value=0.0518193	bias_p_value=2.45689e-08	consensus_reject=FREQUENCY_CUTOFF	consensus_score=95.5	fisher_strand_p_value=1.13775e-09	frequency=3.889e-01	ks_quality_p_value=1	major_base=T	major_cov=6/27	major_frequency=6.111e-01	minor_base=G	minor_cov=21/0	new_cov=21/0	polymorphism_frequency=3.889e-01	polymorphism_score=15.4	prediction=polymorphism	ref_cov=6/27	total_cov=27/27
RA	115	.	1	1938523	0	T	G	bias_e_value=2.07752	bias_p_value=9.85006e-07	consensus_reject=FREQUENCY_CUTOFF	consensus_score=104.9	fisher_strand_p_value=5.56361e-08	frequency=3.774e-01	ks_quality_p_value=1	major_base=T	major_cov=9/24	major_frequency=6.226e-01	minor_base=G	minor_cov=20/0	new_cov=20/0	polymorphism_frequency=3.774e-01	polymorphism_score=11.3	prediction=polymorphism	ref_cov=9/24	total_cov=29/24
RA	116	.	1	1985101	0	T	G	bias_e_value=0.00607988	bias_p_value=2.88263e-09	consensus_reject=FREQUENCY_CUTOFF	consensus_score=113.9	fisher_strand_p_value=1.20937e-10	frequency=4.032e-01	ks_quality_p_value=1	major_base=T	major_cov=8/29	major_frequency=5.968e-01	minor_base=G	minor_cov=25/0	new_cov=25/0	polymorphism_frequency=4.032e-01	polymorphism_score=14.1	prediction=polymorphism	ref_cov=8/29	total_cov=34/29
RA	117	.	1	1985121	0	G	A	bias_e_value=10.446	bias_p_value=4.95273e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=126.0	fisher_strand_p_value=3.0979e-07	frequency=2.985e-01	ks_quality_p_value=1	major_base=G	major_cov=17/30	major_frequency=7.015e-01	minor_base=A	minor_cov=20/0	new_cov=20/0	polymorphism_frequency=2.985e-01	polymorphism_score=15.5	prediction=polymorphism	ref_cov=17/30	total_cov=37/30
RA	118	.	1	2074028	0	C	A	bias_e_value=15.8877	bias_p_value=7.5328e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=102.0	fisher_strand_p_value=4.84747e-07	frequency=3.043e-01	ks_quality_p_value=1	major_base=C	major_cov=25/7	major_frequency=6.957e-01	minor_base=A	minor_cov=0/14	new_cov=0/14	polymorphism_frequency=3.043e-01	polymorphism_score=10.1	prediction=polymorphism	ref_cov=25/7	total_cov=25/21
RA	119	.	1	2095199	0	G	A	bias_e_value=0.862758	bias_p_value=4.09056e-07	consensus_reject=FREQUENCY_CUTOFF	consensus_score=126.4	fisher_strand_p_value=2.19516e-08	frequency=3.043e-01	ks_quality_p_value=1	major_base=G	major_cov=33/15	major_frequency=6.957e-01	minor_base=A	minor_cov=0/21	new_cov=0/21	polymorphism_frequency=3.043e-01	polymorphism_score=14.0	prediction=polymorphism	ref_cov=33/15	total_cov=33/36
RA	120	.	1	2095224	0	A	C	bias_e_value=3.61047e-09	bias_p_value=1.71182e-15	consensus_reject=FREQUENCY_CUTOFF	consensus_score=103.8	fisher_strand_p_value=4.42835e-17	frequency=5.000e-01	ks_quality_p_value=1	major_base=A	major_cov=32/2	major_frequency=5.000e-01	minor_base=C	minor_cov=0/34	new_cov=0/34	polymorphism_frequency=5.000e-01	polymorphism_score=17.2	prediction=polymorphism	ref_cov=32/2	total_cov=32/36
JC	121	.	1	1	1	1	2109143	-1	0	alignment_overlap=0	circular_chromosome=1	coverage_minus=33	coverage_plus=39	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=227	key=1__1__1__1__2109143__-1__0____251__251__0__0	max_left=250	max_left_minus=250	max_left_plus=244	max_min_left=123	max_min_left_minus=108	max_min_left_plus=123	max_min_right=124	max_min_right_minus=124	max_min_right_plus=121	max_pos_hash_score=454	max_right=250	max_right_minus=250	max_right_plus=242	neg_log10_pos_hash_p_value=0.3	new_junction_coverage=1.07	new_junction_read_count=72	polymorphism_frequency=1.000e+00	pos_hash_score=49	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=0	side_1_possible_overlap_registers=227	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=227	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=72
JC	122	.	1	5369	1	1	5947	1	0	alignment_overlap=7	coverage_minus=5	coverage_plus=4	flanking_left=251	flanking_right=251	frequency=NA	junction_possible_overlap_registers=220	key=1__5369__1__1__5940__1__7____251__251__1__1	max_left=150	max_left_minus=150	max_left_plus=150	max_min_left=92	max_min_left_minus=92	max_min_left_plus=52	max_min_right=118	max_min_right_minus=94	max_min_right_plus=118	max_pos_hash_score=440	max_right=213	max_right_minus=174	max_right_plus=213	neg_log10_pos_hash_p_value=4.6	new_junction_coverage=0.14	new_junction_read_count=9	polymorphism_frequency=NA	pos_hash_score=6	prediction=unknown	reject=COVERAGE_EVENNESS_SKEW	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=7	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=9
JC	123	.	1	5428	1	1	5932	1	0	alignment_overlap=8	coverage_minus=6	coverage_plus=0	flanking_left=251	flanking_right=251	frequency=NA	junction_possible_overlap_registers=219	key=1__5428__1__1__5924__1__8____251__251__1__1	max_left=122	max_left_minus=122	max_left_plus=0	max_min_left=122	max_min_left_minus=122	max_min_left_plus=0	max_min_right=120	max_min_right_minus=120	max_min_right_plus=0	max_pos_hash_score=438	max_right=152	max_right_minus=152	max_right_plus=0	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.09	new_junction_read_count=6	polymorphism_frequency=NA	pos_hash_score=3	prediction=unknown	reject=COVERAGE_EVENNESS_SKEW	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=8	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=6
JC	124	.	1	5611	-1	1	5821	-1	0	alignment_overlap=9	coverage_minus=1	coverage_plus=4	flanking_left=251	flanking_right=251	frequency=NA	junction_possible_overlap_registers=218	key=1__5611__-1__1__5830__-1__9____251__251__1__1	max_left=153	max_left_minus=144	max_left_plus=153	max_min_left=120	max_min_left_minus=0	max_min_left_plus=120	max_min_right=87	max_min_right_minus=54	max_min_right_plus=87	max_pos_hash_score=436	max_right=190	max_right_minus=54	max_right_plus=190	neg_log10_pos_hash_p_value=5.0	new_junction_coverage=0.08	new_junction_read_count=5	polymorphism_frequency=NA	pos_hash_score=5	prediction=unknown	reject=COVERAGE_EVENNESS_SKEW	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=9	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=5
JC	125	.	1	9953	-1	1	10135	-1	0	alignment_overlap=13	coverage_minus=3	coverage_plus=6	flanking_left=251	flanking_right=251	frequency=1.104e-01	junction_possible_overlap_registers=214	key=1__9953__-1__1__10148__-1__13____251__251__0__0	max_left=164	max_left_minus=164	max_left_plus=52	max_min_left=89	max_min_left_minus=89	max_min_left_plus=52	max_min_right=74	max_min_right_minus=74	max_min_right_plus=0	max_pos_hash_score=428	max_right=185	max_right_minus=149	max_right_plus=185	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.14	new_junction_read_count=9	polymorphism_frequency=1.104e-01	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.02	side_1_overlap=13	side_1_possible_overlap_registers=227	side_1_read_count=69	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.26	side_2_overlap=0	side_2_possible_overlap_registers=214	side_2_read_count=80	side_2_redundant=0	total_non_overlap_reads=9
JC	126	.	1	11341	-1	1	11479	-1	0	alignment_overlap=7	coverage_minus=2	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=5.278e-02	junction_possible_overlap_registers=220	key=1__11341__-1__1__11486__-1__7____251__251__0__0	max_left=198	max_left_minus=168	max_left_plus=198	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=102	max_min_right_minus=88	max_min_right_plus=102	max_pos_hash_score=440	max_right=102	max_right_minus=88	max_right_plus=102	neg_log10_pos_hash_p_value=5.4	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=5.278e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.17	side_1_overlap=7	side_1_possible_overlap_registers=227	side_1_read_count=79	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.02	side_2_overlap=0	side_2_possible_overlap_registers=220	side_2_read_count=67	side_2_redundant=0	total_non_overlap_reads=4
JC	127	.	1	37921	1	1	38102	1	0	alignment_overlap=7	coverage_minus=3	coverage_plus=0	flanking_left=251	flanking_right=251	frequency=3.544e-02	junction_possible_overlap_registers=220	key=1__37921__1__1__38095__1__7____251__251__0__0	max_left=149	max_left_minus=149	max_left_plus=0	max_min_left=107	max_min_left_minus=107	max_min_left_plus=0	max_min_right=98	max_min_right_minus=98	max_min_right_plus=0	max_pos_hash_score=440	max_right=137	max_right_minus=137	max_right_plus=0	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=3.544e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.30	side_1_overlap=7	side_1_possible_overlap_registers=227	side_1_read_count=88	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.19	side_2_overlap=0	side_2_possible_overlap_registers=220	side_2_read_count=78	side_2_redundant=0	total_non_overlap_reads=3
JC	128	.	1	90394	1	1	90504	1	0	alignment_overlap=2	coverage_minus=4	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=7.721e-02	junction_possible_overlap_registers=225	key=1__90394__1__1__90502__1__2____251__251__0__0	max_left=60	max_left_minus=60	max_left_plus=22	max_min_left=60	max_min_left_minus=60	max_min_left_plus=22	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_pos_hash_score=450	max_right=227	max_right_minus=190	max_right_plus=227	neg_log10_pos_hash_p_value=5.5	new_junction_coverage=0.10	new_junction_read_count=7	polymorphism_frequency=7.721e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.13	side_1_overlap=2	side_1_possible_overlap_registers=227	side_1_read_count=76	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.38	side_2_overlap=0	side_2_possible_overlap_registers=225	side_2_read_count=92	side_2_redundant=0	total_non_overlap_reads=7
JC	129	.	1	108382	-1	1	108862	-1	0	alignment_overlap=15	coverage_minus=3	coverage_plus=1	flanking_left=251	flanking_right=251	frequency=4.438e-02	junction_possible_overlap_registers=212	key=1__108382__-1__1__108877__-1__15____251__251__0__0	max_left=155	max_left_minus=155	max_left_plus=139	max_min_left=78	max_min_left_minus=78	max_min_left_plus=0	max_min_right=95	max_min_right_minus=95	max_min_right_plus=95	max_pos_hash_score=424	max_right=157	max_right_minus=157	max_right_plus=95	neg_log10_pos_hash_p_value=5.3	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=4.438e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.29	side_1_overlap=15	side_1_possible_overlap_registers=227	side_1_read_count=87	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.44	side_2_overlap=0	side_2_possible_overlap_registers=212	side_2_read_count=91	side_2_redundant=0	total_non_overlap_reads=4
JC	130	.	1	133789	-1	1	133916	-1	0	alignment_overlap=8	coverage_minus=2	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=4.650e-02	junction_possible_overlap_registers=219	key=1__133789__-1__1__133924__-1__8____251__251__0__0	max_left=144	max_left_minus=144	max_left_plus=116	max_min_left=116	max_min_left_minus=72	max_min_left_plus=116	max_min_right=84	max_min_right_minus=84	max_min_right_plus=0	max_pos_hash_score=438	max_right=127	max_right_minus=127	max_right_plus=127	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=4.650e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.24	side_1_overlap=8	side_1_possible_overlap_registers=227	side_1_read_count=84	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.27	side_2_overlap=0	side_2_possible_overlap_registers=219	side_2_read_count=83	side_2_redundant=0	total_non_overlap_reads=4
JC	131	.	1	138654	1	1	138831	1	0	alignment_overlap=11	coverage_minus=3	coverage_plus=1	flanking_left=251	flanking_right=251	frequency=3.554e-02	junction_possible_overlap_registers=216	key=1__138654__1__1__138820__1__11____251__251__0__0	max_left=159	max_left_minus=159	max_left_plus=22	max_min_left=22	max_min_left_minus=0	max_min_left_plus=22	max_min_right=94	max_min_right_minus=94	max_min_right_plus=0	max_pos_hash_score=432	max_right=218	max_right_minus=94	max_right_plus=218	neg_log10_pos_hash_p_value=5.3	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=3.554e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.81	side_1_overlap=11	side_1_possible_overlap_registers=227	side_1_read_count=122	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.57	side_2_overlap=0	side_2_possible_overlap_registers=216	side_2_read_count=101	side_2_redundant=0	total_non_overlap_reads=4
JC	132	.	1	185260	-1	1	185363	-1	0	alignment_overlap=4	coverage_minus=1	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=3.957e-02	junction_possible_overlap_registers=223	key=1__185260__-1__1__185367__-1__4____251__251__0__0	max_left=154	max_left_minus=154	max_left_plus=116	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=93	max_min_right_minus=93	max_min_right_plus=66	max_pos_hash_score=446	max_right=93	max_right_minus=93	max_right_plus=66	neg_log10_pos_hash_p_value=5.9	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=3.957e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.14	side_1_overlap=4	side_1_possible_overlap_registers=227	side_1_read_count=77	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.06	side_2_overlap=0	side_2_possible_overlap_registers=223	side_2_read_count=70	side_2_redundant=0	total_non_overlap_reads=3
JC	133	.	1	191258	1	1	191586	1	0	alignment_overlap=8	coverage_minus=2	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=6.063e-02	junction_possible_overlap_registers=219	key=1__191258__1__1__191578__1__8____251__251__0__0	max_left=121	max_left_minus=121	max_left_plus=88	max_min_left=88	max_min_left_minus=0	max_min_left_plus=88	max_min_right=93	max_min_right_minus=93	max_min_right_plus=0	max_pos_hash_score=438	max_right=171	max_right_minus=93	max_right_plus=171	neg_log10_pos_hash_p_value=5.4	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=6.063e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.86	side_1_overlap=8	side_1_possible_overlap_registers=227	side_1_read_count=58	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.04	side_2_overlap=0	side_2_possible_overlap_registers=219	side_2_read_count=68	side_2_redundant=0	total_non_overlap_reads=4
JC	134	.	1	197270	-1	1	197460	-1	0	alignment_overlap=12	coverage_minus=3	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=8.502e-02	junction_possible_overlap_registers=215	key=1__197270__-1__1__197472__-1__12____251__251__0__0	max_left=122	max_left_minus=122	max_left_plus=63	max_min_left=63	max_min_left_minus=59	max_min_left_plus=63	max_min_right=117	max_min_right_minus=117	max_min_right_plus=0	max_pos_hash_score=430	max_right=180	max_right_minus=180	max_right_plus=176	neg_log10_pos_hash_p_value=5.3	new_junction_coverage=0.09	new_junction_read_count=6	polymorphism_frequency=8.502e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.08	side_1_overlap=12	side_1_possible_overlap_registers=227	side_1_read_count=73	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.94	side_2_overlap=0	side_2_possible_overlap_registers=215	side_2_read_count=60	side_2_redundant=0	total_non_overlap_reads=5
JC	135	.	1	200414	1	1	201040	1	0	alignment_overlap=9	coverage_minus=1	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=4.582e-02	junction_possible_overlap_registers=218	key=1__200414__1__1__201031__1__9____251__251__0__0	max_left=174	max_left_minus=174	max_left_plus=73	max_min_left=73	max_min_left_minus=0	max_min_left_plus=73	max_min_right=68	max_min_right_minus=68	max_min_right_plus=0	max_pos_hash_score=436	max_right=180	max_right_minus=68	max_right_plus=180	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=4.582e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.27	side_1_overlap=9	side_1_possible_overlap_registers=227	side_1_read_count=86	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.30	side_2_overlap=0	side_2_possible_overlap_registers=218	side_2_read_count=84	side_2_redundant=0	total_non_overlap_reads=4
JC	136	.	1	230348	-1	1	230524	-1	0	alignment_overlap=11	coverage_minus=2	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=5.307e-02	junction_possible_overlap_registers=216	key=1__230359__-1__1__230524__-1__11____251__251__1__0	max_left=152	max_left_minus=104	max_left_plus=152	max_min_left=108	max_min_left_minus=104	max_min_left_plus=108	max_min_right=88	max_min_right_minus=0	max_min_right_plus=88	max_pos_hash_score=432	max_right=131	max_right_minus=131	max_right_plus=131	neg_log10_pos_hash_p_value=5.3	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=5.307e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.11	side_2_overlap=11	side_2_possible_overlap_registers=227	side_2_read_count=75	side_2_redundant=0	total_non_overlap_reads=4
JC	137	.	1	262772	-1	1	263166	-1	0	alignment_overlap=8	coverage_minus=2	coverage_plus=1	flanking_left=251	flanking_right=251	frequency=NA	junction_possible_overlap_registers=219	key=1__262772__-1__1__263174__-1__8____251__251__1__1	max_left=155	max_left_minus=155	max_left_plus=60	max_min_left=60	max_min_left_minus=0	max_min_left_plus=60	max_min_right=44	max_min_right_minus=44	max_min_right_plus=0	max_pos_hash_score=438	max_right=182	max_right_minus=44	max_right_plus=182	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=NA	pos_hash_score=3	prediction=unknown	reject=COVERAGE_EVENNESS_SKEW	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=8	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=3
JC	138	.	1	262924	-1	1	263260	-1	0	alignment_overlap=9	coverage_minus=1	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=NA	junction_possible_overlap_registers=218	key=1__262924__-1__1__263269__-1__9____251__251__1__1	max_left=156	max_left_minus=62	max_left_plus=156	max_min_left=82	max_min_left_minus=62	max_min_left_plus=82	max_min_right=85	max_min_right_minus=0	max_min_right_plus=85	max_pos_hash_score=436	max_right=138	max_right_minus=138	max_right_plus=138	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=NA	pos_hash_score=3	prediction=unknown	reject=COVERAGE_EVENNESS_SKEW	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=9	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=3
JC	139	.	1	263951	1	1	264090	1	0	alignment_overlap=17	coverage_minus=9	coverage_plus=7	flanking_left=251	flanking_right=251	frequency=NA	junction_possible_overlap_registers=210	key=1__263951__1__1__264073__1__17____251__251__1__1	max_left=109	max_left_minus=109	max_left_plus=102	max_min_left=109	max_min_left_minus=109	max_min_left_plus=102	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_pos_hash_score=420	max_right=229	max_right_minus=190	max_right_plus=229	neg_log10_pos_hash_p_value=3.9	new_junction_coverage=0.26	new_junction_read_count=16	polymorphism_frequency=NA	pos_hash_score=8	prediction=unknown	reject=COVERAGE_EVENNESS_SKEW	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=17	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=16
JC	140	.	1	263967	-1	1	264072	-1	0	alignment_overlap=17	coverage_minus=5	coverage_plus=29	flanking_left=251	flanking_right=251	frequency=NA	junction_possible_overlap_registers=210	key=1__263967__-1__1__264089__-1__17____251__251__1__1	max_left=232	max_left_minus=232	max_left_plus=219	max_min_left=108	max_min_left_minus=46	max_min_left_plus=108	max_min_right=111	max_min_right_minus=108	max_min_right_plus=111	max_pos_hash_score=420	max_right=188	max_right_minus=188	max_right_plus=111	neg_log10_pos_hash_p_value=2.6	new_junction_coverage=0.54	new_junction_read_count=34	polymorphism_frequency=NA	pos_hash_score=14	prediction=unknown	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=17	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=34
JC	141	.	1	264273	-1	1	264902	-1	0	alignment_overlap=8	coverage_minus=2	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=NA	junction_possible_overlap_registers=219	key=1__264273__-1__1__264910__-1__8____251__251__1__1	max_left=211	max_left_minus=211	max_left_plus=154	max_min_left=75	max_min_left_minus=0	max_min_left_plus=75	max_min_right=99	max_min_right_minus=99	max_min_right_plus=89	max_pos_hash_score=438	max_right=168	max_right_minus=99	max_right_plus=168	neg_log10_pos_hash_p_value=5.4	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=NA	pos_hash_score=4	prediction=unknown	reject=COVERAGE_EVENNESS_SKEW	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=8	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=4
JC	142	.	1	264903	-1	1	265040	-1	0	alignment_overlap=3	coverage_minus=4	coverage_plus=4	flanking_left=251	flanking_right=251	frequency=NA	junction_possible_overlap_registers=224	key=1__264903__-1__1__265043__-1__3____251__251__1__1	max_left=167	max_left_minus=167	max_left_plus=115	max_min_left=115	max_min_left_minus=0	max_min_left_plus=115	max_min_right=83	max_min_right_minus=83	max_min_right_plus=0	max_pos_hash_score=448	max_right=133	max_right_minus=83	max_right_plus=133	neg_log10_pos_hash_p_value=5.9	new_junction_coverage=0.12	new_junction_read_count=8	polymorphism_frequency=NA	pos_hash_score=3	prediction=unknown	reject=COVERAGE_EVENNESS_SKEW	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=3	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=8
JC	143	.	1	266297	-1	1	266966	-1	0	alignment_overlap=6	coverage_minus=5	coverage_plus=1	flanking_left=251	flanking_right=251	frequency=NA	junction_possible_overlap_registers=221	key=1__266297__-1__1__266972__-1__6____251__251__1__1	max_left=119	max_left_minus=119	max_left_plus=38	max_min_left=119	max_min_left_minus=119	max_min_left_plus=38	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_pos_hash_score=442	max_right=193	max_right_minus=193	max_right_plus=185	neg_log10_pos_hash_p_value=5.0	new_junction_coverage=0.09	new_junction_read_count=6	polymorphism_frequency=NA	pos_hash_score=5	prediction=unknown	reject=COVERAGE_EVENNESS_SKEW	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=6	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=6
JC	144	.	1	266643	-1	1	266911	-1	0	alignment_overlap=9	coverage_minus=3	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=NA	junction_possible_overlap_registers=218	key=1__266643__-1__1__266920__-1__9____251__251__1__1	max_left=60	max_left_minus=60	max_left_plus=60	max_min_left=60	max_min_left_minus=60	max_min_left_plus=60	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_pos_hash_score=436	max_right=130	max_right_minus=130	max_right_plus=130	neg_log10_pos_hash_p_value=5.4	new_junction_coverage=0.08	new_junction_read_count=5	polymorphism_frequency=NA	pos_hash_score=4	prediction=unknown	reject=COVERAGE_EVENNESS_SKEW	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=9	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=5
JC	145	.	1	276382	1	1	276812	1	0	alignment_overlap=5	coverage_minus=3	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=1.137e-01	junction_possible_overlap_registers=222	key=1__276382__1__1__276807__1__5____251__251__0__0	max_left=144	max_left_minus=144	max_left_plus=117	max_min_left=117	max_min_left_minus=0	max_min_left_plus=117	max_min_right=102	max_min_right_minus=102	max_min_right_plus=0	max_pos_hash_score=444	max_right=158	max_right_minus=102	max_right_plus=158	neg_log10_pos_hash_p_value=5.9	new_junction_coverage=0.08	new_junction_read_count=5	polymorphism_frequency=1.137e-01	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.71	side_1_overlap=5	side_1_possible_overlap_registers=227	side_1_read_count=48	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.47	side_2_overlap=0	side_2_possible_overlap_registers=222	side_2_read_count=31	side_2_redundant=0	total_non_overlap_reads=5
JC	146	.	1	283065	1	1	283290	1	0	alignment_overlap=5	coverage_minus=3	coverage_plus=0	flanking_left=251	flanking_right=251	frequency=3.992e-02	junction_possible_overlap_registers=222	key=1__283065__1__1__283285__1__5____251__251__0__0	max_left=97	max_left_minus=97	max_left_plus=0	max_min_left=97	max_min_left_minus=97	max_min_left_plus=0	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_pos_hash_score=444	max_right=132	max_right_minus=132	max_right_plus=0	neg_log10_pos_hash_p_value=5.9	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=3.992e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.16	side_1_overlap=5	side_1_possible_overlap_registers=227	side_1_read_count=78	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.03	side_2_overlap=0	side_2_possible_overlap_registers=222	side_2_read_count=68	side_2_redundant=0	total_non_overlap_reads=3
JC	147	.	1	293347	-1	1	293640	-1	0	alignment_overlap=8	coverage_minus=3	coverage_plus=0	flanking_left=251	flanking_right=251	frequency=5.425e-02	junction_possible_overlap_registers=219	key=1__293347__-1__1__293648__-1__8____251__251__0__0	max_left=99	max_left_minus=99	max_left_plus=0	max_min_left=99	max_min_left_minus=99	max_min_left_plus=0	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_pos_hash_score=438	max_right=171	max_right_minus=171	max_right_plus=0	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=5.425e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.59	side_1_overlap=8	side_1_possible_overlap_registers=227	side_1_read_count=40	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.01	side_2_overlap=0	side_2_possible_overlap_registers=219	side_2_read_count=66	side_2_redundant=0	total_non_overlap_reads=3
JC	148	.	1	303904	1	1	304016	1	0	alignment_overlap=1	coverage_minus=4	coverage_plus=5	flanking_left=251	flanking_right=251	frequency=9.296e-02	junction_possible_overlap_registers=226	key=1__303904__1__1__304015__1__1____251__251__0__0	max_left=105	max_left_minus=105	max_left_plus=105	max_min_left=105	max_min_left_minus=105	max_min_left_plus=80	max_min_right=57	max_min_right_minus=57	max_min_right_plus=57	max_pos_hash_score=452	max_right=248	max_right_minus=143	max_right_plus=248	neg_log10_pos_hash_p_value=4.7	new_junction_coverage=0.13	new_junction_read_count=9	polymorphism_frequency=9.296e-02	pos_hash_score=6	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.23	side_1_overlap=1	side_1_possible_overlap_registers=227	side_1_read_count=83	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.38	side_2_overlap=0	side_2_possible_overlap_registers=226	side_2_read_count=93	side_2_redundant=0	total_non_overlap_reads=9
JC	149	.	1	314434	-1	1	314579	-1	0	alignment_overlap=10	coverage_minus=2	coverage_plus=1	flanking_left=251	flanking_right=251	frequency=3.400e-02	junction_possible_overlap_registers=217	key=1__314434__-1__1__314589__-1__10____251__251__0__0	max_left=88	max_left_minus=88	max_left_plus=47	max_min_left=88	max_min_left_minus=88	max_min_left_plus=47	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_pos_hash_score=434	max_right=146	max_right_minus=145	max_right_plus=146	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=3.400e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.19	side_1_overlap=10	side_1_possible_overlap_registers=227	side_1_read_count=80	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.46	side_2_overlap=0	side_2_possible_overlap_registers=217	side_2_read_count=94	side_2_redundant=0	total_non_overlap_reads=3
JC	150	.	1	350659	1	1	350931	1	0	alignment_overlap=6	coverage_minus=3	coverage_plus=1	flanking_left=251	flanking_right=251	frequency=4.968e-02	junction_possible_overlap_registers=221	key=1__350659__1__1__350925__1__6____251__251__0__0	max_left=191	max_left_minus=191	max_left_plus=191	max_min_left=77	max_min_left_minus=77	max_min_left_plus=0	max_min_right=53	max_min_right_minus=53	max_min_right_plus=24	max_pos_hash_score=442	max_right=168	max_right_minus=168	max_right_plus=24	neg_log10_pos_hash_p_value=5.4	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=4.968e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.10	side_1_overlap=6	side_1_possible_overlap_registers=227	side_1_read_count=74	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.23	side_2_overlap=0	side_2_possible_overlap_registers=221	side_2_read_count=81	side_2_redundant=0	total_non_overlap_reads=4
JC	151	.	1	353616	1	1	353864	1	0	alignment_overlap=11	coverage_minus=2	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=4.838e-02	junction_possible_overlap_registers=216	key=1__353616__1__1__353853__1__11____251__251__0__0	max_left=164	max_left_minus=164	max_left_plus=152	max_min_left=92	max_min_left_minus=0	max_min_left_plus=92	max_min_right=88	max_min_right_minus=76	max_min_right_plus=88	max_pos_hash_score=432	max_right=148	max_right_minus=76	max_right_plus=148	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=4.838e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.11	side_1_overlap=11	side_1_possible_overlap_registers=227	side_1_read_count=75	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.34	side_2_overlap=0	side_2_possible_overlap_registers=216	side_2_read_count=86	side_2_redundant=0	total_non_overlap_reads=4
JC	152	.	1	386091	1	1	386566	1	0	alignment_overlap=10	coverage_minus=2	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=8.182e-02	junction_possible_overlap_registers=217	key=1__386091__1__1__386556__1__10____251__251__0__0	max_left=133	max_left_minus=126	max_left_plus=133	max_min_left=53	max_min_left_minus=53	max_min_left_plus=18	max_min_right=109	max_min_right_minus=109	max_min_right_plus=108	max_pos_hash_score=434	max_right=223	max_right_minus=109	max_right_plus=223	neg_log10_pos_hash_p_value=5.3	new_junction_coverage=0.08	new_junction_read_count=5	polymorphism_frequency=8.182e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.93	side_1_overlap=10	side_1_possible_overlap_registers=227	side_1_read_count=63	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.81	side_2_overlap=0	side_2_possible_overlap_registers=217	side_2_read_count=52	side_2_redundant=0	total_non_overlap_reads=5
JC	153	.	1	400797	-1	1	401532	-1	0	alignment_overlap=6	coverage_minus=2	coverage_plus=1	flanking_left=251	flanking_right=251	frequency=3.660e-02	junction_possible_overlap_registers=221	key=1__400797__-1__1__401538__-1__6____251__251__0__0	max_left=171	max_left_minus=171	max_left_plus=153	max_min_left=52	max_min_left_minus=52	max_min_left_plus=0	max_min_right=92	max_min_right_minus=74	max_min_right_plus=92	max_pos_hash_score=442	max_right=136	max_right_minus=136	max_right_plus=92	neg_log10_pos_hash_p_value=5.9	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=3.660e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.16	side_1_overlap=6	side_1_possible_overlap_registers=227	side_1_read_count=78	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.25	side_2_overlap=0	side_2_possible_overlap_registers=221	side_2_read_count=82	side_2_redundant=0	total_non_overlap_reads=3
JC	154	.	1	415297	-1	1	415557	-1	0	alignment_overlap=6	coverage_minus=2	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=NA	junction_possible_overlap_registers=221	key=1__415297__-1__1__415563__-1__6____251__251__1__1	max_left=203	max_left_minus=203	max_left_plus=119	max_min_left=119	max_min_left_minus=101	max_min_left_plus=119	max_min_right=44	max_min_right_minus=44	max_min_right_plus=0	max_pos_hash_score=442	max_right=126	max_right_minus=125	max_right_plus=126	neg_log10_pos_hash_p_value=5.4	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=NA	pos_hash_score=4	prediction=unknown	reject=COVERAGE_EVENNESS_SKEW	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=6	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=4
JC	155	.	1	430555	1	1	430762	1	0	alignment_overlap=7	coverage_minus=3	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=9.393e-02	junction_possible_overlap_registers=220	key=1__430555__1__1__430755__1__7____251__251__0__0	max_left=193	max_left_minus=193	max_left_plus=60	max_min_left=117	max_min_left_minus=117	max_min_left_plus=60	max_min_right=57	max_min_right_minus=57	max_min_right_plus=0	max_pos_hash_score=440	max_right=172	max_right_minus=127	max_right_plus=172	neg_log10_pos_hash_p_value=5.0	new_junction_coverage=0.09	new_junction_read_count=6	polymorphism_frequency=9.393e-02	pos_hash_score=5	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.08	side_1_overlap=7	side_1_possible_overlap_registers=227	side_1_read_count=73	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.69	side_2_overlap=0	side_2_possible_overlap_registers=220	side_2_read_count=45	side_2_redundant=0	total_non_overlap_reads=6
JC	156	.	1	436594	1	1	436678	1	0	alignment_overlap=11	coverage_minus=1	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=4.456e-02	junction_possible_overlap_registers=216	key=1__436594__1__1__436667__1__11____251__251__0__0	max_left=64	max_left_minus=64	max_left_plus=64	max_min_left=64	max_min_left_minus=64	max_min_left_plus=39	max_min_right=61	max_min_right_minus=0	max_min_right_plus=61	max_pos_hash_score=432	max_right=175	max_right_minus=175	max_right_plus=124	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=4.456e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.02	side_1_overlap=11	side_1_possible_overlap_registers=227	side_1_read_count=69	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.98	side_2_overlap=0	side_2_possible_overlap_registers=216	side_2_read_count=63	side_2_redundant=0	total_non_overlap_reads=3
JC	157	.	1	438194	-1	1	438568	-1	0	alignment_overlap=8	coverage_minus=1	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=3.804e-02	junction_possible_overlap_registers=219	key=1__438194__-1__1__438576__-1__8____251__251__0__0	max_left=104	max_left_minus=88	max_left_plus=104	max_min_left=104	max_min_left_minus=88	max_min_left_plus=104	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_pos_hash_score=438	max_right=156	max_right_minus=155	max_right_plus=156	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=3.804e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.96	side_1_overlap=8	side_1_possible_overlap_registers=227	side_1_read_count=65	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.37	side_2_overlap=0	side_2_possible_overlap_registers=219	side_2_read_count=89	side_2_redundant=0	total_non_overlap_reads=3
JC	158	.	1	439190	1	1	441231	1	0	alignment_overlap=9	coverage_minus=0	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=3.826e-02	junction_possible_overlap_registers=218	key=1__439190__1__1__441222__1__9____251__251__0__0	max_left=121	max_left_minus=0	max_left_plus=121	max_min_left=89	max_min_left_minus=0	max_min_left_plus=89	max_min_right=57	max_min_right_minus=0	max_min_right_plus=57	max_pos_hash_score=436	max_right=152	max_right_minus=0	max_right_plus=152	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=3.826e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.19	side_1_overlap=9	side_1_possible_overlap_registers=227	side_1_read_count=80	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.14	side_2_overlap=0	side_2_possible_overlap_registers=218	side_2_read_count=74	side_2_redundant=0	total_non_overlap_reads=3
JC	159	.	1	443871	1	1	444006	1	0	alignment_overlap=13	coverage_minus=3	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=5.196e-02	junction_possible_overlap_registers=214	key=1__443871__1__1__443993__1__13____251__251__0__0	max_left=213	max_left_minus=111	max_left_plus=213	max_min_left=110	max_min_left_minus=110	max_min_left_plus=78	max_min_right=60	max_min_right_minus=60	max_min_right_plus=22	max_pos_hash_score=428	max_right=158	max_right_minus=128	max_right_plus=158	neg_log10_pos_hash_p_value=5.3	new_junction_coverage=0.08	new_junction_read_count=5	polymorphism_frequency=5.196e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.44	side_1_overlap=13	side_1_possible_overlap_registers=227	side_1_read_count=97	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.43	side_2_overlap=0	side_2_possible_overlap_registers=214	side_2_read_count=91	side_2_redundant=0	total_non_overlap_reads=5
JC	160	.	1	471034	-1	1	471140	-1	0	alignment_overlap=9	coverage_minus=2	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=7.360e-02	junction_possible_overlap_registers=218	key=1__471034__-1__1__471149__-1__9____251__251__0__0	max_left=215	max_left_minus=215	max_left_plus=135	max_min_left=92	max_min_left_minus=92	max_min_left_plus=43	max_min_right=107	max_min_right_minus=26	max_min_right_plus=107	max_pos_hash_score=436	max_right=107	max_right_minus=107	max_right_plus=107	neg_log10_pos_hash_p_value=5.4	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=7.360e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.86	side_1_overlap=9	side_1_possible_overlap_registers=227	side_1_read_count=58	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.69	side_2_overlap=0	side_2_possible_overlap_registers=218	side_2_read_count=45	side_2_redundant=0	total_non_overlap_reads=4
JC	161	.	1	486332	-1	1	486562	-1	0	alignment_overlap=10	coverage_minus=4	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=6.265e-02	junction_possible_overlap_registers=217	key=1__486332__-1__1__486572__-1__10____251__251__0__0	max_left=173	max_left_minus=173	max_left_plus=58	max_min_left=58	max_min_left_minus=58	max_min_left_plus=58	max_min_right=68	max_min_right_minus=68	max_min_right_plus=0	max_pos_hash_score=434	max_right=210	max_right_minus=192	max_right_plus=210	neg_log10_pos_hash_p_value=5.3	new_junction_coverage=0.09	new_junction_read_count=6	polymorphism_frequency=6.265e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.50	side_1_overlap=10	side_1_possible_overlap_registers=227	side_1_read_count=101	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.29	side_2_overlap=0	side_2_possible_overlap_registers=217	side_2_read_count=83	side_2_redundant=0	total_non_overlap_reads=6
JC	162	.	1	487955	-1	1	488220	-1	0	alignment_overlap=8	coverage_minus=3	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=4.726e-02	junction_possible_overlap_registers=219	key=1__487955__-1__1__488228__-1__8____251__251__0__0	max_left=178	max_left_minus=178	max_left_plus=104	max_min_left=78	max_min_left_minus=78	max_min_left_plus=0	max_min_right=82	max_min_right_minus=64	max_min_right_plus=82	max_pos_hash_score=438	max_right=194	max_right_minus=194	max_right_plus=82	neg_log10_pos_hash_p_value=5.4	new_junction_coverage=0.08	new_junction_read_count=5	polymorphism_frequency=4.726e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.42	side_1_overlap=8	side_1_possible_overlap_registers=227	side_1_read_count=96	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.67	side_2_overlap=0	side_2_possible_overlap_registers=219	side_2_read_count=109	side_2_redundant=0	total_non_overlap_reads=5
JC	163	.	1	494861	1	1	495009	1	0	alignment_overlap=9	coverage_minus=1	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=3.366e-02	junction_possible_overlap_registers=218	key=1__494861__1__1__495000__1__9____251__251__0__0	max_left=133	max_left_minus=132	max_left_plus=133	max_min_left=73	max_min_left_minus=0	max_min_left_plus=73	max_min_right=83	max_min_right_minus=83	max_min_right_plus=83	max_pos_hash_score=436	max_right=169	max_right_minus=83	max_right_plus=169	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=3.366e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.41	side_1_overlap=9	side_1_possible_overlap_registers=227	side_1_read_count=95	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.25	side_2_overlap=0	side_2_possible_overlap_registers=218	side_2_read_count=81	side_2_redundant=0	total_non_overlap_reads=3
JC	164	.	1	508965	1	1	509810	1	0	alignment_overlap=11	coverage_minus=13	coverage_plus=5	flanking_left=251	flanking_right=251	frequency=1.581e-01	junction_possible_overlap_registers=216	key=1__508965__1__1__509799__1__11____251__251__0__0	max_left=167	max_left_minus=167	max_left_plus=124	max_min_left=102	max_min_left_minus=102	max_min_left_plus=39	max_min_right=114	max_min_right_minus=70	max_min_right_plus=114	max_pos_hash_score=432	max_right=220	max_right_minus=220	max_right_plus=204	neg_log10_pos_hash_p_value=4.0	new_junction_coverage=0.28	new_junction_read_count=18	polymorphism_frequency=1.581e-01	pos_hash_score=8	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.63	side_1_overlap=11	side_1_possible_overlap_registers=227	side_1_read_count=110	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.35	side_2_overlap=0	side_2_possible_overlap_registers=216	side_2_read_count=87	side_2_redundant=0	total_non_overlap_reads=18
JC	165	.	1	510484	1	1	510711	1	0	alignment_overlap=12	coverage_minus=3	coverage_plus=4	flanking_left=251	flanking_right=251	frequency=6.821e-02	junction_possible_overlap_registers=215	key=1__510484__1__1__510699__1__12____251__251__0__0	max_left=206	max_left_minus=206	max_left_plus=136	max_min_left=118	max_min_left_minus=0	max_min_left_plus=118	max_min_right=102	max_min_right_minus=34	max_min_right_plus=102	max_pos_hash_score=430	max_right=172	max_right_minus=34	max_right_plus=172	neg_log10_pos_hash_p_value=4.6	new_junction_coverage=0.11	new_junction_read_count=7	polymorphism_frequency=6.821e-02	pos_hash_score=6	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.33	side_1_overlap=12	side_1_possible_overlap_registers=227	side_1_read_count=90	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.66	side_2_overlap=0	side_2_possible_overlap_registers=215	side_2_read_count=106	side_2_redundant=0	total_non_overlap_reads=7
JC	166	.	1	527984	-1	1	528119	-1	0	alignment_overlap=9	coverage_minus=0	coverage_plus=4	flanking_left=251	flanking_right=251	frequency=5.490e-02	junction_possible_overlap_registers=218	key=1__527984__-1__1__528128__-1__9____251__251__0__0	max_left=122	max_left_minus=0	max_left_plus=122	max_min_left=107	max_min_left_minus=0	max_min_left_plus=107	max_min_right=34	max_min_right_minus=0	max_min_right_plus=34	max_pos_hash_score=436	max_right=136	max_right_minus=0	max_right_plus=136	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=5.490e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.23	side_1_overlap=9	side_1_possible_overlap_registers=227	side_1_read_count=83	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.89	side_2_overlap=0	side_2_possible_overlap_registers=218	side_2_read_count=58	side_2_redundant=0	total_non_overlap_reads=4
JC	167	.	1	541384	1	1	541428	1	0	alignment_overlap=8	coverage_minus=1	coverage_plus=4	flanking_left=251	flanking_right=251	frequency=5.355e-02	junction_possible_overlap_registers=219	key=1__541384__1__1__541420__1__8____251__251__0__0	max_left=210	max_left_minus=154	max_left_plus=210	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=118	max_min_right_minus=32	max_min_right_plus=118	max_pos_hash_score=438	max_right=118	max_right_minus=32	max_right_plus=118	neg_log10_pos_hash_p_value=5.0	new_junction_coverage=0.08	new_junction_read_count=5	polymorphism_frequency=5.355e-02	pos_hash_score=5	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.36	side_1_overlap=8	side_1_possible_overlap_registers=227	side_1_read_count=92	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.35	side_2_overlap=0	side_2_possible_overlap_registers=219	side_2_read_count=88	side_2_redundant=0	total_non_overlap_reads=5
JC	168	.	1	554148	-1	1	554650	-1	0	alignment_overlap=11	coverage_minus=3	coverage_plus=0	flanking_left=251	flanking_right=251	frequency=4.473e-02	junction_possible_overlap_registers=216	key=1__554148__-1__1__554661__-1__11____251__251__0__0	max_left=178	max_left_minus=178	max_left_plus=0	max_min_left=55	max_min_left_minus=55	max_min_left_plus=0	max_min_right=62	max_min_right_minus=62	max_min_right_plus=0	max_pos_hash_score=432	max_right=188	max_right_minus=188	max_right_plus=0	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=4.473e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.27	side_1_overlap=11	side_1_possible_overlap_registers=227	side_1_read_count=86	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.39	side_2_overlap=0	side_2_possible_overlap_registers=216	side_2_read_count=89	side_2_redundant=0	total_non_overlap_reads=3
JC	169	.	1	567700	-1	1	567824	-1	0	alignment_overlap=7	coverage_minus=1	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=6.283e-02	junction_possible_overlap_registers=220	key=1__567700__-1__1__567831__-1__7____251__251__0__0	max_left=119	max_left_minus=114	max_left_plus=119	max_min_left=119	max_min_left_minus=0	max_min_left_plus=119	max_min_right=38	max_min_right_minus=36	max_min_right_plus=38	max_pos_hash_score=440	max_right=124	max_right_minus=36	max_right_plus=124	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=6.283e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.73	side_1_overlap=7	side_1_possible_overlap_registers=227	side_1_read_count=49	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.64	side_2_overlap=0	side_2_possible_overlap_registers=220	side_2_read_count=42	side_2_redundant=0	total_non_overlap_reads=3
JC	170	.	1	578616	-1	1	578710	-1	0	alignment_overlap=10	coverage_minus=3	coverage_plus=1	flanking_left=251	flanking_right=251	frequency=5.793e-02	junction_possible_overlap_registers=217	key=1__578616__-1__1__578720__-1__10____251__251__0__0	max_left=168	max_left_minus=168	max_left_plus=143	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=98	max_min_right_minus=93	max_min_right_plus=98	max_pos_hash_score=434	max_right=98	max_right_minus=93	max_right_plus=98	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=5.793e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.98	side_1_overlap=10	side_1_possible_overlap_registers=227	side_1_read_count=66	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.04	side_2_overlap=0	side_2_possible_overlap_registers=217	side_2_read_count=67	side_2_redundant=0	total_non_overlap_reads=4
JC	171	.	1	585753	-1	1	586540	-1	0	alignment_overlap=10	coverage_minus=2	coverage_plus=1	flanking_left=251	flanking_right=251	frequency=5.632e-02	junction_possible_overlap_registers=217	key=1__585753__-1__1__586550__-1__10____251__251__0__0	max_left=170	max_left_minus=170	max_left_plus=70	max_min_left=70	max_min_left_minus=70	max_min_left_plus=70	max_min_right=71	max_min_right_minus=71	max_min_right_plus=0	max_pos_hash_score=434	max_right=146	max_right_minus=146	max_right_plus=146	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=5.632e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.99	side_1_overlap=10	side_1_possible_overlap_registers=227	side_1_read_count=67	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.08	side_2_overlap=0	side_2_possible_overlap_registers=217	side_2_read_count=70	side_2_redundant=0	total_non_overlap_reads=3
JC	172	.	1	595447	-1	1	595583	-1	0	alignment_overlap=9	coverage_minus=6	coverage_plus=6	flanking_left=251	flanking_right=251	frequency=1.567e-01	junction_possible_overlap_registers=218	key=1__595447__-1__1__595592__-1__9____251__251__0__0	max_left=209	max_left_minus=209	max_left_plus=105	max_min_left=105	max_min_left_minus=10	max_min_left_plus=105	max_min_right=96	max_min_right_minus=96	max_min_right_plus=0	max_pos_hash_score=436	max_right=136	max_right_minus=136	max_right_plus=136	neg_log10_pos_hash_p_value=4.6	new_junction_coverage=0.19	new_junction_read_count=12	polymorphism_frequency=1.567e-01	pos_hash_score=6	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.05	side_1_overlap=9	side_1_possible_overlap_registers=227	side_1_read_count=71	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.94	side_2_overlap=0	side_2_possible_overlap_registers=218	side_2_read_count=61	side_2_redundant=0	total_non_overlap_reads=12
JC	173	.	1	601789	1	1	602101	1	0	alignment_overlap=8	coverage_minus=1	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=4.319e-02	junction_possible_overlap_registers=219	key=1__601789__1__1__602093__1__8____251__251__0__0	max_left=103	max_left_minus=71	max_left_plus=103	max_min_left=103	max_min_left_minus=71	max_min_left_plus=103	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_pos_hash_score=438	max_right=205	max_right_minus=139	max_right_plus=205	neg_log10_pos_hash_p_value=5.4	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=4.319e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.17	side_1_overlap=8	side_1_possible_overlap_registers=227	side_1_read_count=79	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.55	side_2_overlap=0	side_2_possible_overlap_registers=219	side_2_read_count=101	side_2_redundant=0	total_non_overlap_reads=4
JC	174	.	1	619741	1	1	620369	1	0	alignment_overlap=11	coverage_minus=1	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=4.677e-02	junction_possible_overlap_registers=216	key=1__619741__1__1__620358__1__11____251__251__0__0	max_left=187	max_left_minus=153	max_left_plus=187	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=87	max_min_right_minus=87	max_min_right_plus=53	max_pos_hash_score=432	max_right=87	max_right_minus=87	max_right_plus=53	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=4.677e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.83	side_1_overlap=11	side_1_possible_overlap_registers=227	side_1_read_count=56	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.07	side_2_overlap=0	side_2_possible_overlap_registers=216	side_2_read_count=69	side_2_redundant=0	total_non_overlap_reads=3
JC	175	.	1	641481	1	1	641859	1	0	alignment_overlap=9	coverage_minus=2	coverage_plus=1	flanking_left=251	flanking_right=251	frequency=3.441e-02	junction_possible_overlap_registers=218	key=1__641481__1__1__641850__1__9____251__251__0__0	max_left=100	max_left_minus=100	max_left_plus=56	max_min_left=100	max_min_left_minus=100	max_min_left_plus=56	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_pos_hash_score=436	max_right=191	max_right_minus=191	max_right_plus=117	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=3.441e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.36	side_1_overlap=9	side_1_possible_overlap_registers=227	side_1_read_count=92	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.23	side_2_overlap=0	side_2_possible_overlap_registers=218	side_2_read_count=80	side_2_redundant=0	total_non_overlap_reads=3
JC	176	.	1	641697	-1	1	641902	-1	0	alignment_overlap=10	coverage_minus=1	coverage_plus=6	flanking_left=251	flanking_right=251	frequency=8.631e-02	junction_possible_overlap_registers=217	key=1__641697__-1__1__641912__-1__10____251__251__0__0	max_left=90	max_left_minus=59	max_left_plus=90	max_min_left=90	max_min_left_minus=59	max_min_left_plus=90	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_pos_hash_score=434	max_right=200	max_right_minus=152	max_right_plus=200	neg_log10_pos_hash_p_value=4.6	new_junction_coverage=0.11	new_junction_read_count=7	polymorphism_frequency=8.631e-02	pos_hash_score=6	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.27	side_1_overlap=10	side_1_possible_overlap_registers=227	side_1_read_count=86	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.02	side_2_overlap=0	side_2_possible_overlap_registers=217	side_2_read_count=66	side_2_redundant=0	total_non_overlap_reads=7
JC	177	.	1	642882	-1	1	643368	-1	0	alignment_overlap=5	coverage_minus=5	coverage_plus=14	flanking_left=251	flanking_right=251	frequency=1.863e-01	junction_possible_overlap_registers=222	key=1__642882__-1__1__643373__-1__5____251__251__0__0	max_left=206	max_left_minus=206	max_left_plus=176	max_min_left=85	max_min_left_minus=85	max_min_left_plus=57	max_min_right=100	max_min_right_minus=71	max_min_right_plus=100	max_pos_hash_score=444	max_right=235	max_right_minus=161	max_right_plus=235	neg_log10_pos_hash_p_value=3.8	new_junction_coverage=0.29	new_junction_read_count=19	polymorphism_frequency=1.863e-01	pos_hash_score=9	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.33	side_1_overlap=5	side_1_possible_overlap_registers=227	side_1_read_count=90	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.18	side_2_overlap=0	side_2_possible_overlap_registers=222	side_2_read_count=78	side_2_redundant=0	total_non_overlap_reads=19
JC	178	.	1	648485	1	1	648800	1	0	alignment_overlap=21	coverage_minus=2	coverage_plus=1	flanking_left=251	flanking_right=251	frequency=5.008e-02	junction_possible_overlap_registers=206	key=1__648485__1__1__648779__1__21____251__251__0__0	max_left=124	max_left_minus=124	max_left_plus=105	max_min_left=105	max_min_left_minus=78	max_min_left_plus=105	max_min_right=105	max_min_right_minus=105	max_min_right_plus=0	max_pos_hash_score=412	max_right=152	max_right_minus=152	max_right_plus=125	neg_log10_pos_hash_p_value=5.6	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=5.008e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.83	side_1_overlap=21	side_1_possible_overlap_registers=227	side_1_read_count=56	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.03	side_2_overlap=0	side_2_possible_overlap_registers=206	side_2_read_count=63	side_2_redundant=0	total_non_overlap_reads=3
JC	179	.	1	653738	-1	1	654260	-1	0	alignment_overlap=11	coverage_minus=2	coverage_plus=1	flanking_left=251	flanking_right=251	frequency=3.075e-02	junction_possible_overlap_registers=216	key=1__653738__-1__1__654271__-1__11____251__251__0__0	max_left=174	max_left_minus=174	max_left_plus=112	max_min_left=112	max_min_left_minus=78	max_min_left_plus=112	max_min_right=65	max_min_right_minus=65	max_min_right_plus=0	max_pos_hash_score=432	max_right=162	max_right_minus=162	max_right_plus=128	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=3.075e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.50	side_1_overlap=11	side_1_possible_overlap_registers=227	side_1_read_count=101	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.45	side_2_overlap=0	side_2_possible_overlap_registers=216	side_2_read_count=93	side_2_redundant=0	total_non_overlap_reads=3
JC	180	.	1	653773	-1	1	654127	-1	0	alignment_overlap=9	coverage_minus=3	coverage_plus=1	flanking_left=251	flanking_right=251	frequency=3.547e-02	junction_possible_overlap_registers=218	key=1__653773__-1__1__654136__-1__9____251__251__0__0	max_left=168	max_left_minus=168	max_left_plus=159	max_min_left=115	max_min_left_minus=115	max_min_left_plus=0	max_min_right=85	max_min_right_minus=85	max_min_right_plus=83	max_pos_hash_score=436	max_right=116	max_right_minus=116	max_right_plus=83	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=3.547e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.66	side_1_overlap=9	side_1_possible_overlap_registers=227	side_1_read_count=112	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.70	side_2_overlap=0	side_2_possible_overlap_registers=218	side_2_read_count=110	side_2_redundant=0	total_non_overlap_reads=4
JC	181	.	1	678829	1	1	679131	1	0	alignment_overlap=8	coverage_minus=5	coverage_plus=0	flanking_left=251	flanking_right=251	frequency=7.479e-02	junction_possible_overlap_registers=219	key=1__678829__1__1__679123__1__8____251__251__0__0	max_left=125	max_left_minus=125	max_left_plus=0	max_min_left=91	max_min_left_minus=91	max_min_left_plus=0	max_min_right=119	max_min_right_minus=119	max_min_right_plus=0	max_pos_hash_score=438	max_right=151	max_right_minus=151	max_right_plus=0	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.08	new_junction_read_count=5	polymorphism_frequency=7.479e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.96	side_1_overlap=8	side_1_possible_overlap_registers=227	side_1_read_count=65	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.94	side_2_overlap=0	side_2_possible_overlap_registers=219	side_2_read_count=61	side_2_redundant=0	total_non_overlap_reads=5
JC	182	.	1	685443	1	1	685666	1	0	alignment_overlap=9	coverage_minus=6	coverage_plus=0	flanking_left=251	flanking_right=251	frequency=1.107e-01	junction_possible_overlap_registers=218	key=1__685443__1__1__685657__1__9____251__251__0__0	max_left=207	max_left_minus=207	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=104	max_min_right_minus=104	max_min_right_plus=0	max_pos_hash_score=436	max_right=104	max_right_minus=104	max_right_plus=0	neg_log10_pos_hash_p_value=5.4	new_junction_coverage=0.09	new_junction_read_count=6	polymorphism_frequency=1.107e-01	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.96	side_1_overlap=9	side_1_possible_overlap_registers=227	side_1_read_count=65	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.52	side_2_overlap=0	side_2_possible_overlap_registers=218	side_2_read_count=34	side_2_redundant=0	total_non_overlap_reads=6
JC	183	.	1	690937	1	1	691475	1	0	alignment_overlap=6	coverage_minus=1	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=7.044e-02	junction_possible_overlap_registers=221	key=1__690937__1__1__691469__1__6____251__251__0__0	max_left=180	max_left_minus=159	max_left_plus=180	max_min_left=85	max_min_left_minus=0	max_min_left_plus=85	max_min_right=65	max_min_right_minus=49	max_min_right_plus=65	max_pos_hash_score=442	max_right=160	max_right_minus=49	max_right_plus=160	neg_log10_pos_hash_p_value=5.4	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=7.044e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.80	side_1_overlap=6	side_1_possible_overlap_registers=227	side_1_read_count=54	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.81	side_2_overlap=0	side_2_possible_overlap_registers=221	side_2_read_count=53	side_2_redundant=0	total_non_overlap_reads=4
JC	184	.	1	711318	-1	1	711387	-1	0	alignment_overlap=11	coverage_minus=1	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=5.930e-02	junction_possible_overlap_registers=216	key=1__711318__-1__1__711398__-1__11____251__251__0__0	max_left=169	max_left_minus=137	max_left_plus=169	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=71	max_min_right_minus=71	max_min_right_plus=71	max_pos_hash_score=432	max_right=71	max_right_minus=71	max_right_plus=71	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=5.930e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.95	side_1_overlap=11	side_1_possible_overlap_registers=227	side_1_read_count=64	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.03	side_2_overlap=0	side_2_possible_overlap_registers=216	side_2_read_count=66	side_2_redundant=0	total_non_overlap_reads=4
JC	185	.	1	734322	1	1	734665	1	0	alignment_overlap=10	coverage_minus=2	coverage_plus=8	flanking_left=251	flanking_right=251	frequency=1.384e-01	junction_possible_overlap_registers=217	key=1__734322__1__1__734655__1__10____251__251__0__0	max_left=203	max_left_minus=203	max_left_plus=181	max_min_left=53	max_min_left_minus=53	max_min_left_plus=0	max_min_right=72	max_min_right_minus=37	max_min_right_plus=72	max_pos_hash_score=434	max_right=188	max_right_minus=188	max_right_plus=72	neg_log10_pos_hash_p_value=4.9	new_junction_coverage=0.15	new_junction_read_count=10	polymorphism_frequency=1.384e-01	pos_hash_score=5	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.84	side_1_overlap=10	side_1_possible_overlap_registers=227	side_1_read_count=57	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.08	side_2_overlap=0	side_2_possible_overlap_registers=217	side_2_read_count=70	side_2_redundant=0	total_non_overlap_reads=10
JC	186	.	1	744646	1	1	744730	1	0	alignment_overlap=13	coverage_minus=3	coverage_plus=0	flanking_left=251	flanking_right=251	frequency=5.345e-02	junction_possible_overlap_registers=214	key=1__744646__1__1__744717__1__13____251__251__0__0	max_left=61	max_left_minus=61	max_left_plus=0	max_min_left=61	max_min_left_minus=61	max_min_left_plus=0	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_pos_hash_score=428	max_right=179	max_right_minus=179	max_right_plus=0	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=5.345e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.71	side_1_overlap=13	side_1_possible_overlap_registers=227	side_1_read_count=48	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.96	side_2_overlap=0	side_2_possible_overlap_registers=214	side_2_read_count=61	side_2_redundant=0	total_non_overlap_reads=3
JC	187	.	1	753483	-1	1	753754	-1	0	alignment_overlap=7	coverage_minus=2	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=7.973e-02	junction_possible_overlap_registers=220	key=1__753483__-1__1__753761__-1__7____251__251__0__0	max_left=205	max_left_minus=80	max_left_plus=205	max_min_left=80	max_min_left_minus=80	max_min_left_plus=80	max_min_right=100	max_min_right_minus=0	max_min_right_plus=100	max_pos_hash_score=440	max_right=100	max_right_minus=100	max_right_plus=100	neg_log10_pos_hash_p_value=5.4	new_junction_coverage=0.08	new_junction_read_count=5	polymorphism_frequency=7.973e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.76	side_1_overlap=7	side_1_possible_overlap_registers=227	side_1_read_count=51	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.01	side_2_overlap=0	side_2_possible_overlap_registers=220	side_2_read_count=66	side_2_redundant=0	total_non_overlap_reads=5
JC	188	.	1	762475	1	1	764024	1	0	alignment_overlap=10	coverage_minus=1	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=5.778e-02	junction_possible_overlap_registers=217	key=1__762475__1__1__764014__1__10____251__251__0__0	max_left=106	max_left_minus=89	max_left_plus=106	max_min_left=106	max_min_left_minus=89	max_min_left_plus=106	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_pos_hash_score=434	max_right=169	max_right_minus=149	max_right_plus=169	neg_log10_pos_hash_p_value=5.3	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=5.778e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.86	side_1_overlap=10	side_1_possible_overlap_registers=227	side_1_read_count=58	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.16	side_2_overlap=0	side_2_possible_overlap_registers=217	side_2_read_count=75	side_2_redundant=0	total_non_overlap_reads=4
JC	189	.	1	764997	-1	1	765171	-1	0	alignment_overlap=10	coverage_minus=2	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=8.632e-02	junction_possible_overlap_registers=217	key=1__764997__-1__1__765181__-1__10____251__251__0__0	max_left=227	max_left_minus=227	max_left_plus=65	max_min_left=65	max_min_left_minus=0	max_min_left_plus=65	max_min_right=93	max_min_right_minus=93	max_min_right_plus=0	max_pos_hash_score=434	max_right=177	max_right_minus=93	max_right_plus=177	neg_log10_pos_hash_p_value=5.3	new_junction_coverage=0.08	new_junction_read_count=5	polymorphism_frequency=8.632e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.73	side_1_overlap=10	side_1_possible_overlap_registers=227	side_1_read_count=49	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.91	side_2_overlap=0	side_2_possible_overlap_registers=217	side_2_read_count=59	side_2_redundant=0	total_non_overlap_reads=5
JC	190	.	1	834762	-1	1	835174	-1	0	alignment_overlap=9	coverage_minus=2	coverage_plus=1	flanking_left=251	flanking_right=251	frequency=3.136e-02	junction_possible_overlap_registers=218	key=1__834762__-1__1__835183__-1__9____251__251__0__0	max_left=148	max_left_minus=148	max_left_plus=98	max_min_left=98	max_min_left_minus=0	max_min_left_plus=98	max_min_right=110	max_min_right_minus=110	max_min_right_plus=0	max_pos_hash_score=436	max_right=144	max_right_minus=110	max_right_plus=144	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=3.136e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.36	side_1_overlap=9	side_1_possible_overlap_registers=227	side_1_read_count=92	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.50	side_2_overlap=0	side_2_possible_overlap_registers=218	side_2_read_count=97	side_2_redundant=0	total_non_overlap_reads=3
JC	191	.	1	865747	-1	1	866026	-1	0	alignment_overlap=13	coverage_minus=2	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=1.094e-01	junction_possible_overlap_registers=214	key=1__865747__-1__1__866039__-1__13____251__251__0__0	max_left=191	max_left_minus=155	max_left_plus=191	max_min_left=74	max_min_left_minus=0	max_min_left_plus=74	max_min_right=111	max_min_right_minus=111	max_min_right_plus=47	max_pos_hash_score=428	max_right=165	max_right_minus=111	max_right_plus=165	neg_log10_pos_hash_p_value=4.9	new_junction_coverage=0.08	new_junction_read_count=5	polymorphism_frequency=1.094e-01	pos_hash_score=5	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.67	side_1_overlap=13	side_1_possible_overlap_registers=227	side_1_read_count=45	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.61	side_2_overlap=0	side_2_possible_overlap_registers=214	side_2_read_count=39	side_2_redundant=0	total_non_overlap_reads=5
JC	192	.	1	874472	1	1	874619	1	0	alignment_overlap=9	coverage_minus=1	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=2.763e-02	junction_possible_overlap_registers=218	key=1__874472__1__1__874610__1__9____251__251__0__0	max_left=126	max_left_minus=126	max_left_plus=126	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=116	max_min_right_minus=116	max_min_right_plus=99	max_pos_hash_score=436	max_right=116	max_right_minus=116	max_right_plus=99	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=2.763e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.44	side_1_overlap=9	side_1_possible_overlap_registers=227	side_1_read_count=97	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.82	side_2_overlap=0	side_2_possible_overlap_registers=218	side_2_read_count=118	side_2_redundant=0	total_non_overlap_reads=3
JC	193	.	1	875608	-1	1	875864	-1	0	alignment_overlap=8	coverage_minus=3	coverage_plus=1	flanking_left=251	flanking_right=251	frequency=5.936e-02	junction_possible_overlap_registers=219	key=1__875608__-1__1__875872__-1__8____251__251__0__0	max_left=231	max_left_minus=231	max_left_plus=53	max_min_left=53	max_min_left_minus=0	max_min_left_plus=53	max_min_right=113	max_min_right_minus=113	max_min_right_plus=0	max_pos_hash_score=438	max_right=190	max_right_minus=113	max_right_plus=190	neg_log10_pos_hash_p_value=5.4	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=5.936e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.93	side_1_overlap=8	side_1_possible_overlap_registers=227	side_1_read_count=63	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.01	side_2_overlap=0	side_2_possible_overlap_registers=219	side_2_read_count=66	side_2_redundant=0	total_non_overlap_reads=4
JC	194	.	1	906433	-1	1	906506	-1	0	alignment_overlap=9	coverage_minus=2	coverage_plus=7	flanking_left=251	flanking_right=251	frequency=1.256e-01	junction_possible_overlap_registers=218	key=1__906433__-1__1__906515__-1__9____251__251__0__0	max_left=169	max_left_minus=138	max_left_plus=169	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=73	max_min_right_minus=73	max_min_right_plus=73	max_pos_hash_score=436	max_right=73	max_right_minus=73	max_right_plus=73	neg_log10_pos_hash_p_value=5.4	new_junction_coverage=0.14	new_junction_read_count=9	polymorphism_frequency=1.256e-01	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.02	side_1_overlap=9	side_1_possible_overlap_registers=227	side_1_read_count=69	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.91	side_2_overlap=0	side_2_possible_overlap_registers=218	side_2_read_count=59	side_2_redundant=0	total_non_overlap_reads=9
JC	195	.	1	925998	1	1	926169	1	0	alignment_overlap=15	coverage_minus=0	coverage_plus=7	flanking_left=251	flanking_right=251	frequency=1.009e-01	junction_possible_overlap_registers=212	key=1__925998__1__1__926154__1__15____251__251__0__0	max_left=121	max_left_minus=0	max_left_plus=121	max_min_left=111	max_min_left_minus=0	max_min_left_plus=111	max_min_right=114	max_min_right_minus=0	max_min_right_plus=114	max_pos_hash_score=424	max_right=190	max_right_minus=0	max_right_plus=190	neg_log10_pos_hash_p_value=4.9	new_junction_coverage=0.11	new_junction_read_count=7	polymorphism_frequency=1.009e-01	pos_hash_score=5	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.96	side_1_overlap=15	side_1_possible_overlap_registers=227	side_1_read_count=65	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.02	side_2_overlap=0	side_2_possible_overlap_registers=212	side_2_read_count=64	side_2_redundant=0	total_non_overlap_reads=7
JC	196	.	1	926012	-1	1	926153	-1	0	alignment_overlap=15	coverage_minus=1	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=6.158e-02	junction_possible_overlap_registers=212	key=1__926012__-1__1__926168__-1__15____251__251__0__0	max_left=216	max_left_minus=216	max_left_plus=149	max_min_left=116	max_min_left_minus=0	max_min_left_plus=116	max_min_right=85	max_min_right_minus=20	max_min_right_plus=85	max_pos_hash_score=424	max_right=134	max_right_minus=20	max_right_plus=134	neg_log10_pos_hash_p_value=5.3	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=6.158e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.92	side_1_overlap=15	side_1_possible_overlap_registers=227	side_1_read_count=62	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.02	side_2_overlap=0	side_2_possible_overlap_registers=212	side_2_read_count=64	side_2_redundant=0	total_non_overlap_reads=4
JC	197	.	1	926371	-1	1	926650	-1	0	alignment_overlap=14	coverage_minus=4	coverage_plus=4	flanking_left=251	flanking_right=251	frequency=1.382e-01	junction_possible_overlap_registers=213	key=1__926371__-1__1__926664__-1__14____251__251__0__0	max_left=212	max_left_minus=212	max_left_plus=134	max_min_left=110	max_min_left_minus=105	max_min_left_plus=110	max_min_right=102	max_min_right_minus=36	max_min_right_plus=102	max_pos_hash_score=426	max_right=132	max_right_minus=132	max_right_plus=126	neg_log10_pos_hash_p_value=4.5	new_junction_coverage=0.13	new_junction_read_count=8	polymorphism_frequency=1.382e-01	pos_hash_score=6	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.77	side_1_overlap=14	side_1_possible_overlap_registers=227	side_1_read_count=52	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.81	side_2_overlap=0	side_2_possible_overlap_registers=213	side_2_read_count=51	side_2_redundant=0	total_non_overlap_reads=8
JC	198	.	1	936731	1	1	937489	1	0	alignment_overlap=9	coverage_minus=0	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=5.226e-02	junction_possible_overlap_registers=218	key=1__936731__1__1__937480__1__9____251__251__0__0	max_left=170	max_left_minus=0	max_left_plus=170	max_min_left=95	max_min_left_minus=0	max_min_left_plus=95	max_min_right=72	max_min_right_minus=0	max_min_right_plus=72	max_pos_hash_score=436	max_right=151	max_right_minus=0	max_right_plus=151	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=5.226e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.81	side_1_overlap=9	side_1_possible_overlap_registers=227	side_1_read_count=55	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.86	side_2_overlap=0	side_2_possible_overlap_registers=218	side_2_read_count=56	side_2_redundant=0	total_non_overlap_reads=3
JC	199	.	1	938906	-1	1	939719	-1	0	alignment_overlap=6	coverage_minus=3	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=6.496e-02	junction_possible_overlap_registers=221	key=1__938906__-1__1__939725__-1__6____251__251__0__0	max_left=221	max_left_minus=221	max_left_plus=145	max_min_left=104	max_min_left_minus=104	max_min_left_plus=0	max_min_right=100	max_min_right_minus=24	max_min_right_plus=100	max_pos_hash_score=442	max_right=141	max_right_minus=141	max_right_plus=100	neg_log10_pos_hash_p_value=5.4	new_junction_coverage=0.08	new_junction_read_count=5	polymorphism_frequency=6.496e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.16	side_1_overlap=6	side_1_possible_overlap_registers=227	side_1_read_count=78	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.03	side_2_overlap=0	side_2_possible_overlap_registers=221	side_2_read_count=68	side_2_redundant=0	total_non_overlap_reads=5
JC	200	.	1	977504	-1	1	978273	-1	0	alignment_overlap=8	coverage_minus=3	coverage_plus=0	flanking_left=251	flanking_right=251	frequency=6.046e-02	junction_possible_overlap_registers=219	key=1__977504__-1__1__978281__-1__8____251__251__0__0	max_left=142	max_left_minus=142	max_left_plus=0	max_min_left=57	max_min_left_minus=57	max_min_left_plus=0	max_min_right=103	max_min_right_minus=103	max_min_right_plus=0	max_pos_hash_score=438	max_right=186	max_right_minus=186	max_right_plus=0	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=6.046e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.74	side_1_overlap=8	side_1_possible_overlap_registers=227	side_1_read_count=50	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.69	side_2_overlap=0	side_2_possible_overlap_registers=219	side_2_read_count=45	side_2_redundant=0	total_non_overlap_reads=3
JC	201	.	1	990510	1	1	990627	1	0	alignment_overlap=9	coverage_minus=2	coverage_plus=1	flanking_left=251	flanking_right=251	frequency=4.203e-02	junction_possible_overlap_registers=218	key=1__990510__1__1__990618__1__9____251__251__0__0	max_left=97	max_left_minus=92	max_left_plus=97	max_min_left=97	max_min_left_minus=92	max_min_left_plus=97	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_pos_hash_score=436	max_right=181	max_right_minus=181	max_right_plus=105	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=4.203e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.21	side_1_overlap=9	side_1_possible_overlap_registers=227	side_1_read_count=82	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.89	side_2_overlap=0	side_2_possible_overlap_registers=218	side_2_read_count=58	side_2_redundant=0	total_non_overlap_reads=3
JC	202	.	1	996773	-1	1	996905	-1	0	alignment_overlap=7	coverage_minus=3	coverage_plus=1	flanking_left=251	flanking_right=251	frequency=7.401e-02	junction_possible_overlap_registers=220	key=1__996773__-1__1__996912__-1__7____251__251__0__0	max_left=137	max_left_minus=137	max_left_plus=112	max_min_left=112	max_min_left_minus=0	max_min_left_plus=112	max_min_right=121	max_min_right_minus=121	max_min_right_plus=0	max_pos_hash_score=440	max_right=131	max_right_minus=121	max_right_plus=131	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=7.401e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.92	side_1_overlap=7	side_1_possible_overlap_registers=227	side_1_read_count=62	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.61	side_2_overlap=0	side_2_possible_overlap_registers=220	side_2_read_count=40	side_2_redundant=0	total_non_overlap_reads=4
JC	203	.	1	1004875	-1	1	1005359	-1	0	alignment_overlap=5	coverage_minus=2	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=9.306e-02	junction_possible_overlap_registers=222	key=1__1004875__-1__1__1005364__-1__5____251__251__0__0	max_left=155	max_left_minus=155	max_left_plus=108	max_min_left=108	max_min_left_minus=0	max_min_left_plus=108	max_min_right=91	max_min_right_minus=91	max_min_right_plus=0	max_pos_hash_score=444	max_right=165	max_right_minus=91	max_right_plus=165	neg_log10_pos_hash_p_value=5.9	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=9.306e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.70	side_1_overlap=5	side_1_possible_overlap_registers=227	side_1_read_count=47	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.48	side_2_overlap=0	side_2_possible_overlap_registers=222	side_2_read_count=32	side_2_redundant=0	total_non_overlap_reads=4
JC	204	.	1	1020013	-1	1	1020121	-1	0	alignment_overlap=6	coverage_minus=2	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=5.663e-02	junction_possible_overlap_registers=221	key=1__1020013__-1__1__1020127__-1__6____251__251__0__0	max_left=181	max_left_minus=181	max_left_plus=136	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=109	max_min_right_minus=109	max_min_right_plus=109	max_pos_hash_score=442	max_right=109	max_right_minus=109	max_right_plus=109	neg_log10_pos_hash_p_value=5.9	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=5.663e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.98	side_1_overlap=6	side_1_possible_overlap_registers=227	side_1_read_count=66	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.05	side_2_overlap=0	side_2_possible_overlap_registers=221	side_2_read_count=69	side_2_redundant=0	total_non_overlap_reads=4
JC	205	.	1	1033630	1	1	1034508	1	0	alignment_overlap=11	coverage_minus=0	coverage_plus=6	flanking_left=251	flanking_right=251	frequency=1.099e-01	junction_possible_overlap_registers=216	key=1__1033630__1__1__1034497__1__11____251__251__0__0	max_left=211	max_left_minus=0	max_left_plus=211	max_min_left=83	max_min_left_minus=0	max_min_left_plus=83	max_min_right=105	max_min_right_minus=0	max_min_right_plus=105	max_pos_hash_score=432	max_right=225	max_right_minus=0	max_right_plus=225	neg_log10_pos_hash_p_value=4.9	new_junction_coverage=0.09	new_junction_read_count=6	polymorphism_frequency=1.099e-01	pos_hash_score=5	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.87	side_1_overlap=11	side_1_possible_overlap_registers=227	side_1_read_count=59	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.64	side_2_overlap=0	side_2_possible_overlap_registers=216	side_2_read_count=41	side_2_redundant=0	total_non_overlap_reads=6
JC	206	.	1	1081421	1	1	1081767	1	0	alignment_overlap=9	coverage_minus=1	coverage_plus=6	flanking_left=251	flanking_right=251	frequency=7.869e-02	junction_possible_overlap_registers=218	key=1__1081421__1__1__1081758__1__9____251__251__0__0	max_left=233	max_left_minus=173	max_left_plus=233	max_min_left=93	max_min_left_minus=0	max_min_left_plus=93	max_min_right=87	max_min_right_minus=69	max_min_right_plus=87	max_pos_hash_score=436	max_right=149	max_right_minus=69	max_right_plus=149	neg_log10_pos_hash_p_value=5.0	new_junction_coverage=0.11	new_junction_read_count=7	polymorphism_frequency=7.869e-02	pos_hash_score=5	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.53	side_1_overlap=9	side_1_possible_overlap_registers=227	side_1_read_count=103	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.00	side_2_overlap=0	side_2_possible_overlap_registers=218	side_2_read_count=65	side_2_redundant=0	total_non_overlap_reads=7
JC	207	.	1	1097480	-1	1	1098040	-1	0	alignment_overlap=11	coverage_minus=2	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=7.887e-02	junction_possible_overlap_registers=216	key=1__1097480__-1__1__1098051__-1__11____251__251__0__0	max_left=120	max_left_minus=120	max_left_plus=112	max_min_left=112	max_min_left_minus=102	max_min_left_plus=112	max_min_right=120	max_min_right_minus=120	max_min_right_plus=0	max_pos_hash_score=432	max_right=137	max_right_minus=137	max_right_plus=127	neg_log10_pos_hash_p_value=5.3	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=7.887e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.79	side_1_overlap=11	side_1_possible_overlap_registers=227	side_1_read_count=53	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.67	side_2_overlap=0	side_2_possible_overlap_registers=216	side_2_read_count=43	side_2_redundant=0	total_non_overlap_reads=4
JC	208	.	1	1128226	-1	1	1128451	-1	0	alignment_overlap=9	coverage_minus=6	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=1.323e-01	junction_possible_overlap_registers=218	key=1__1128226__-1__1__1128460__-1__9____251__251__0__0	max_left=172	max_left_minus=172	max_left_plus=117	max_min_left=117	max_min_left_minus=76	max_min_left_plus=117	max_min_right=72	max_min_right_minus=72	max_min_right_plus=0	max_pos_hash_score=436	max_right=169	max_right_minus=166	max_right_plus=169	neg_log10_pos_hash_p_value=5.0	new_junction_coverage=0.14	new_junction_read_count=9	polymorphism_frequency=1.323e-01	pos_hash_score=5	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.10	side_1_overlap=9	side_1_possible_overlap_registers=227	side_1_read_count=74	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.73	side_2_overlap=0	side_2_possible_overlap_registers=218	side_2_read_count=47	side_2_redundant=0	total_non_overlap_reads=9
JC	209	.	1	1182035	1	1	1182265	1	0	alignment_overlap=5	coverage_minus=5	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=1.243e-01	junction_possible_overlap_registers=222	key=1__1182035__1__1__1182260__1__5____251__251__0__0	max_left=221	max_left_minus=221	max_left_plus=130	max_min_left=116	max_min_left_minus=114	max_min_left_plus=116	max_min_right=116	max_min_right_minus=25	max_min_right_plus=116	max_pos_hash_score=444	max_right=159	max_right_minus=132	max_right_plus=159	neg_log10_pos_hash_p_value=5.0	new_junction_coverage=0.12	new_junction_read_count=8	polymorphism_frequency=1.243e-01	pos_hash_score=5	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.84	side_1_overlap=5	side_1_possible_overlap_registers=227	side_1_read_count=57	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.86	side_2_overlap=0	side_2_possible_overlap_registers=222	side_2_read_count=57	side_2_redundant=0	total_non_overlap_reads=8
JC	210	.	1	1186377	1	1	1186905	1	0	alignment_overlap=10	coverage_minus=3	coverage_plus=7	flanking_left=251	flanking_right=251	frequency=1.556e-01	junction_possible_overlap_registers=217	key=1__1186377__1__1__1186895__1__10____251__251__0__0	max_left=135	max_left_minus=135	max_left_plus=135	max_min_left=86	max_min_left_minus=0	max_min_left_plus=86	max_min_right=106	max_min_right_minus=106	max_min_right_plus=89	max_pos_hash_score=434	max_right=195	max_right_minus=106	max_right_plus=195	neg_log10_pos_hash_p_value=4.9	new_junction_coverage=0.15	new_junction_read_count=10	polymorphism_frequency=1.556e-01	pos_hash_score=5	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.83	side_1_overlap=10	side_1_possible_overlap_registers=227	side_1_read_count=56	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.85	side_2_overlap=0	side_2_possible_overlap_registers=217	side_2_read_count=55	side_2_redundant=0	total_non_overlap_reads=10
JC	211	.	1	1201197	1	1	1201300	1	0	alignment_overlap=2	coverage_minus=0	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=6.275e-02	junction_possible_overlap_registers=225	key=1__1201197__1__1__1201298__1__2____251__251__0__0	max_left=72	max_left_minus=0	max_left_plus=72	max_min_left=72	max_min_left_minus=0	max_min_left_plus=72	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_pos_hash_score=450	max_right=140	max_right_minus=0	max_right_plus=140	neg_log10_pos_hash_p_value=5.9	new_junction_coverage=0.04	new_junction_read_count=3	polymorphism_frequency=6.275e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.65	side_1_overlap=2	side_1_possible_overlap_registers=227	side_1_read_count=44	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.69	side_2_overlap=0	side_2_possible_overlap_registers=225	side_2_read_count=46	side_2_redundant=0	total_non_overlap_reads=3
JC	212	.	1	1209630	-1	1	1209772	-1	0	alignment_overlap=5	coverage_minus=2	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=5.738e-02	junction_possible_overlap_registers=222	key=1__1209630__-1__1__1209777__-1__5____251__251__0__0	max_left=186	max_left_minus=152	max_left_plus=186	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=118	max_min_right_minus=118	max_min_right_plus=58	max_pos_hash_score=444	max_right=118	max_right_minus=118	max_right_plus=58	neg_log10_pos_hash_p_value=5.9	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=5.738e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.07	side_1_overlap=5	side_1_possible_overlap_registers=227	side_1_read_count=72	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.92	side_2_overlap=0	side_2_possible_overlap_registers=222	side_2_read_count=61	side_2_redundant=0	total_non_overlap_reads=4
JC	213	.	1	1228312	1	1	1228494	1	0	alignment_overlap=5	coverage_minus=1	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=6.166e-02	junction_possible_overlap_registers=222	key=1__1228312__1__1__1228489__1__5____251__251__0__0	max_left=168	max_left_minus=136	max_left_plus=168	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=79	max_min_right_minus=66	max_min_right_plus=79	max_pos_hash_score=444	max_right=79	max_right_minus=66	max_right_plus=79	neg_log10_pos_hash_p_value=5.4	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=6.166e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.84	side_1_overlap=5	side_1_possible_overlap_registers=227	side_1_read_count=57	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.00	side_2_overlap=0	side_2_possible_overlap_registers=222	side_2_read_count=66	side_2_redundant=0	total_non_overlap_reads=4
JC	214	.	1	1241930	1	1	1242275	1	0	alignment_overlap=11	coverage_minus=2	coverage_plus=1	flanking_left=251	flanking_right=251	frequency=3.964e-02	junction_possible_overlap_registers=216	key=1__1241930__1__1__1242264__1__11____251__251__0__0	max_left=144	max_left_minus=144	max_left_plus=128	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=110	max_min_right_minus=93	max_min_right_plus=110	max_pos_hash_score=432	max_right=110	max_right_minus=93	max_right_plus=110	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=3.964e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.11	side_1_overlap=11	side_1_possible_overlap_registers=227	side_1_read_count=75	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.15	side_2_overlap=0	side_2_possible_overlap_registers=216	side_2_read_count=74	side_2_redundant=0	total_non_overlap_reads=3
JC	215	.	1	1273358	-1	1	1273691	-1	0	alignment_overlap=9	coverage_minus=3	coverage_plus=0	flanking_left=251	flanking_right=251	frequency=9.150e-02	junction_possible_overlap_registers=218	key=1__1273358__-1__1__1273700__-1__9____251__251__0__0	max_left=134	max_left_minus=134	max_left_plus=0	max_min_left=67	max_min_left_minus=67	max_min_left_plus=0	max_min_right=109	max_min_right_minus=109	max_min_right_plus=0	max_pos_hash_score=436	max_right=175	max_right_minus=175	max_right_plus=0	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=9.150e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.53	side_1_overlap=9	side_1_possible_overlap_registers=227	side_1_read_count=36	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.39	side_2_overlap=0	side_2_possible_overlap_registers=218	side_2_read_count=25	side_2_redundant=0	total_non_overlap_reads=3
JC	216	.	1	1290733	-1	1	1290873	-1	0	alignment_overlap=9	coverage_minus=1	coverage_plus=7	flanking_left=251	flanking_right=251	frequency=1.170e-01	junction_possible_overlap_registers=218	key=1__1290733__-1__1__1290882__-1__9____251__251__0__0	max_left=175	max_left_minus=175	max_left_plus=134	max_min_left=103	max_min_left_minus=0	max_min_left_plus=103	max_min_right=108	max_min_right_minus=65	max_min_right_plus=108	max_pos_hash_score=436	max_right=141	max_right_minus=65	max_right_plus=141	neg_log10_pos_hash_p_value=5.4	new_junction_coverage=0.12	new_junction_read_count=8	polymorphism_frequency=1.170e-01	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.84	side_1_overlap=9	side_1_possible_overlap_registers=227	side_1_read_count=57	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.02	side_2_overlap=0	side_2_possible_overlap_registers=218	side_2_read_count=66	side_2_redundant=0	total_non_overlap_reads=8
JC	217	.	1	1292956	-1	1	1293180	-1	0	alignment_overlap=10	coverage_minus=4	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=1.109e-01	junction_possible_overlap_registers=217	key=1__1292956__-1__1__1293190__-1__10____251__251__0__0	max_left=160	max_left_minus=160	max_left_plus=121	max_min_left=117	max_min_left_minus=0	max_min_left_plus=117	max_min_right=120	max_min_right_minus=111	max_min_right_plus=120	max_pos_hash_score=434	max_right=218	max_right_minus=111	max_right_plus=218	neg_log10_pos_hash_p_value=5.3	new_junction_coverage=0.11	new_junction_read_count=7	polymorphism_frequency=1.109e-01	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.93	side_1_overlap=10	side_1_possible_overlap_registers=227	side_1_read_count=63	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.81	side_2_overlap=0	side_2_possible_overlap_registers=217	side_2_read_count=52	side_2_redundant=0	total_non_overlap_reads=7
JC	218	.	1	1316598	-1	1	1316691	-1	0	alignment_overlap=7	coverage_minus=1	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=7.315e-02	junction_possible_overlap_registers=220	key=1__1316598__-1__1__1316698__-1__7____251__251__0__0	max_left=172	max_left_minus=131	max_left_plus=172	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=94	max_min_right_minus=94	max_min_right_plus=94	max_pos_hash_score=440	max_right=94	max_right_minus=94	max_right_plus=94	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=7.315e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.79	side_1_overlap=7	side_1_possible_overlap_registers=227	side_1_read_count=53	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.76	side_2_overlap=0	side_2_possible_overlap_registers=220	side_2_read_count=50	side_2_redundant=0	total_non_overlap_reads=4
JC	219	.	1	1319167	1	1	1319303	1	0	alignment_overlap=10	coverage_minus=2	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=6.763e-02	junction_possible_overlap_registers=217	key=1__1319167__1__1__1319293__1__10____251__251__0__0	max_left=116	max_left_minus=116	max_left_plus=116	max_min_left=63	max_min_left_minus=63	max_min_left_plus=0	max_min_right=112	max_min_right_minus=72	max_min_right_plus=112	max_pos_hash_score=434	max_right=177	max_right_minus=177	max_right_plus=112	neg_log10_pos_hash_p_value=4.9	new_junction_coverage=0.08	new_junction_read_count=5	polymorphism_frequency=6.763e-02	pos_hash_score=5	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.05	side_1_overlap=10	side_1_possible_overlap_registers=227	side_1_read_count=71	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.08	side_2_overlap=0	side_2_possible_overlap_registers=217	side_2_read_count=70	side_2_redundant=0	total_non_overlap_reads=5
JC	220	.	1	1424569	1	1	1424752	1	0	alignment_overlap=8	coverage_minus=2	coverage_plus=1	flanking_left=251	flanking_right=251	frequency=4.883e-02	junction_possible_overlap_registers=219	key=1__1424569__1__1__1424744__1__8____251__251__0__0	max_left=150	max_left_minus=150	max_left_plus=132	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=111	max_min_right_minus=94	max_min_right_plus=111	max_pos_hash_score=438	max_right=111	max_right_minus=94	max_right_plus=111	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=4.883e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.89	side_1_overlap=8	side_1_possible_overlap_registers=227	side_1_read_count=60	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.91	side_2_overlap=0	side_2_possible_overlap_registers=219	side_2_read_count=59	side_2_redundant=0	total_non_overlap_reads=3
JC	221	.	1	1429078	-1	1	1429247	-1	0	alignment_overlap=7	coverage_minus=2	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=8.977e-02	junction_possible_overlap_registers=220	key=1__1429078__-1__1__1429254__-1__7____251__251__0__0	max_left=149	max_left_minus=149	max_left_plus=118	max_min_left=118	max_min_left_minus=110	max_min_left_plus=118	max_min_right=95	max_min_right_minus=95	max_min_right_plus=0	max_pos_hash_score=440	max_right=163	max_right_minus=127	max_right_plus=163	neg_log10_pos_hash_p_value=5.0	new_junction_coverage=0.08	new_junction_read_count=5	polymorphism_frequency=8.977e-02	pos_hash_score=5	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.77	side_1_overlap=7	side_1_possible_overlap_registers=227	side_1_read_count=52	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.78	side_2_overlap=0	side_2_possible_overlap_registers=220	side_2_read_count=51	side_2_redundant=0	total_non_overlap_reads=5
JC	222	.	1	1449263	-1	1	1449419	-1	0	alignment_overlap=11	coverage_minus=1	coverage_plus=4	flanking_left=251	flanking_right=251	frequency=7.783e-02	junction_possible_overlap_registers=216	key=1__1449263__-1__1__1449430__-1__11____251__251__0__0	max_left=207	max_left_minus=55	max_left_plus=207	max_min_left=104	max_min_left_minus=55	max_min_left_plus=104	max_min_right=32	max_min_right_minus=0	max_min_right_plus=32	max_pos_hash_score=432	max_right=157	max_right_minus=139	max_right_plus=157	neg_log10_pos_hash_p_value=4.9	new_junction_coverage=0.08	new_junction_read_count=5	polymorphism_frequency=7.783e-02	pos_hash_score=5	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.77	side_1_overlap=11	side_1_possible_overlap_registers=227	side_1_read_count=52	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.07	side_2_overlap=0	side_2_possible_overlap_registers=216	side_2_read_count=69	side_2_redundant=0	total_non_overlap_reads=5
JC	223	.	1	1449278	1	1	1449405	1	0	alignment_overlap=5	coverage_minus=15	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=2.185e-01	junction_possible_overlap_registers=222	key=1__1449278__1__1__1449400__1__5____251__251__0__0	max_left=119	max_left_minus=119	max_left_plus=119	max_min_left=119	max_min_left_minus=119	max_min_left_plus=82	max_min_right=90	max_min_right_minus=90	max_min_right_plus=58	max_pos_hash_score=444	max_right=166	max_right_minus=164	max_right_plus=166	neg_log10_pos_hash_p_value=4.3	new_junction_coverage=0.27	new_junction_read_count=18	polymorphism_frequency=2.185e-01	pos_hash_score=7	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.86	side_1_overlap=5	side_1_possible_overlap_registers=227	side_1_read_count=58	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.09	side_2_overlap=0	side_2_possible_overlap_registers=222	side_2_read_count=72	side_2_redundant=0	total_non_overlap_reads=18
JC	224	.	1	1478981	-1	1	1479630	-1	0	alignment_overlap=4	coverage_minus=1	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=4.235e-02	junction_possible_overlap_registers=223	key=1__1478981__-1__1__1479634__-1__4____251__251__0__0	max_left=192	max_left_minus=62	max_left_plus=192	max_min_left=62	max_min_left_minus=62	max_min_left_plus=0	max_min_right=54	max_min_right_minus=0	max_min_right_plus=54	max_pos_hash_score=446	max_right=184	max_right_minus=184	max_right_plus=54	neg_log10_pos_hash_p_value=5.9	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=4.235e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.13	side_1_overlap=4	side_1_possible_overlap_registers=227	side_1_read_count=76	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.92	side_2_overlap=0	side_2_possible_overlap_registers=223	side_2_read_count=61	side_2_redundant=0	total_non_overlap_reads=3
JC	225	.	1	1543361	1	1	1543591	1	0	alignment_overlap=7	coverage_minus=5	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=1.209e-01	junction_possible_overlap_registers=220	key=1__1543361__1__1__1543584__1__7____251__251__0__0	max_left=206	max_left_minus=206	max_left_plus=54	max_min_left=79	max_min_left_minus=79	max_min_left_plus=54	max_min_right=71	max_min_right_minus=71	max_min_right_plus=0	max_pos_hash_score=440	max_right=227	max_right_minus=165	max_right_plus=227	neg_log10_pos_hash_p_value=5.0	new_junction_coverage=0.11	new_junction_read_count=7	polymorphism_frequency=1.209e-01	pos_hash_score=5	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.59	side_1_overlap=7	side_1_possible_overlap_registers=227	side_1_read_count=40	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.96	side_2_overlap=0	side_2_possible_overlap_registers=220	side_2_read_count=63	side_2_redundant=0	total_non_overlap_reads=7
JC	226	.	1	1563611	-1	1	1563887	-1	0	alignment_overlap=9	coverage_minus=3	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=7.960e-02	junction_possible_overlap_registers=218	key=1__1563611__-1__1__1563896__-1__9____251__251__0__0	max_left=226	max_left_minus=226	max_left_plus=67	max_min_left=108	max_min_left_minus=108	max_min_left_plus=67	max_min_right=16	max_min_right_minus=16	max_min_right_plus=0	max_pos_hash_score=436	max_right=176	max_right_minus=176	max_right_plus=175	neg_log10_pos_hash_p_value=5.0	new_junction_coverage=0.08	new_junction_read_count=5	polymorphism_frequency=7.960e-02	pos_hash_score=5	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.89	side_1_overlap=9	side_1_possible_overlap_registers=227	side_1_read_count=60	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.89	side_2_overlap=0	side_2_possible_overlap_registers=218	side_2_read_count=58	side_2_redundant=0	total_non_overlap_reads=5
JC	227	.	1	1572184	-1	1	1572511	-1	0	alignment_overlap=9	coverage_minus=2	coverage_plus=1	flanking_left=251	flanking_right=251	frequency=4.749e-02	junction_possible_overlap_registers=218	key=1__1572184__-1__1__1572520__-1__9____251__251__0__0	max_left=181	max_left_minus=113	max_left_plus=181	max_min_left=113	max_min_left_minus=113	max_min_left_plus=0	max_min_right=61	max_min_right_minus=0	max_min_right_plus=61	max_pos_hash_score=436	max_right=164	max_right_minus=164	max_right_plus=61	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=4.749e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.99	side_1_overlap=9	side_1_possible_overlap_registers=227	side_1_read_count=67	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.86	side_2_overlap=0	side_2_possible_overlap_registers=218	side_2_read_count=56	side_2_redundant=0	total_non_overlap_reads=3
JC	228	.	1	1627122	-1	1	1627645	-1	0	alignment_overlap=13	coverage_minus=5	coverage_plus=1	flanking_left=251	flanking_right=251	frequency=1.025e-01	junction_possible_overlap_registers=214	key=1__1627122__-1__1__1627658__-1__13____251__251__0__0	max_left=174	max_left_minus=174	max_left_plus=71	max_min_left=89	max_min_left_minus=89	max_min_left_plus=0	max_min_right=81	max_min_right_minus=81	max_min_right_plus=16	max_pos_hash_score=428	max_right=149	max_right_minus=149	max_right_plus=16	neg_log10_pos_hash_p_value=5.3	new_junction_coverage=0.09	new_junction_read_count=6	polymorphism_frequency=1.025e-01	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.02	side_1_overlap=13	side_1_possible_overlap_registers=227	side_1_read_count=69	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.63	side_2_overlap=0	side_2_possible_overlap_registers=214	side_2_read_count=40	side_2_redundant=0	total_non_overlap_reads=6
JC	229	.	1	1636566	1	1	1636845	1	0	alignment_overlap=10	coverage_minus=2	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=8.698e-02	junction_possible_overlap_registers=217	key=1__1636566__1__1__1636835__1__10____251__251__0__0	max_left=193	max_left_minus=193	max_left_plus=98	max_min_left=102	max_min_left_minus=102	max_min_left_plus=98	max_min_right=48	max_min_right_minus=48	max_min_right_plus=0	max_pos_hash_score=434	max_right=174	max_right_minus=139	max_right_plus=174	neg_log10_pos_hash_p_value=5.3	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=8.698e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.68	side_1_overlap=10	side_1_possible_overlap_registers=227	side_1_read_count=46	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.62	side_2_overlap=0	side_2_possible_overlap_registers=217	side_2_read_count=40	side_2_redundant=0	total_non_overlap_reads=4
JC	230	.	1	1727006	-1	1	1727380	-1	0	alignment_overlap=8	coverage_minus=2	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=6.905e-02	junction_possible_overlap_registers=219	key=1__1727006__-1__1__1727388__-1__8____251__251__0__0	max_left=181	max_left_minus=181	max_left_plus=151	max_min_left=90	max_min_left_minus=0	max_min_left_plus=90	max_min_right=91	max_min_right_minus=85	max_min_right_plus=91	max_pos_hash_score=438	max_right=143	max_right_minus=85	max_right_plus=143	neg_log10_pos_hash_p_value=5.4	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=6.905e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.90	side_1_overlap=8	side_1_possible_overlap_registers=227	side_1_read_count=61	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.75	side_2_overlap=0	side_2_possible_overlap_registers=219	side_2_read_count=49	side_2_redundant=0	total_non_overlap_reads=4
JC	231	.	1	1730860	-1	1	1731108	-1	0	alignment_overlap=11	coverage_minus=4	coverage_plus=1	flanking_left=251	flanking_right=251	frequency=8.839e-02	junction_possible_overlap_registers=216	key=1__1730860__-1__1__1731119__-1__11____251__251__0__0	max_left=206	max_left_minus=206	max_left_plus=1	max_min_left=90	max_min_left_minus=90	max_min_left_plus=1	max_min_right=54	max_min_right_minus=54	max_min_right_plus=0	max_pos_hash_score=432	max_right=239	max_right_minus=178	max_right_plus=239	neg_log10_pos_hash_p_value=4.9	new_junction_coverage=0.08	new_junction_read_count=5	polymorphism_frequency=8.839e-02	pos_hash_score=5	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.87	side_1_overlap=11	side_1_possible_overlap_registers=227	side_1_read_count=59	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.73	side_2_overlap=0	side_2_possible_overlap_registers=216	side_2_read_count=47	side_2_redundant=0	total_non_overlap_reads=5
JC	232	.	1	1766210	-1	1	1766409	-1	0	alignment_overlap=9	coverage_minus=2	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=1.184e-01	junction_possible_overlap_registers=218	key=1__1766210__-1__1__1766418__-1__9____251__251__0__0	max_left=155	max_left_minus=155	max_left_plus=71	max_min_left=80	max_min_left_minus=80	max_min_left_plus=71	max_min_right=83	max_min_right_minus=83	max_min_right_plus=0	max_pos_hash_score=436	max_right=171	max_right_minus=124	max_right_plus=171	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.08	new_junction_read_count=5	polymorphism_frequency=1.184e-01	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.56	side_1_overlap=9	side_1_possible_overlap_registers=227	side_1_read_count=38	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.59	side_2_overlap=0	side_2_possible_overlap_registers=218	side_2_read_count=38	side_2_redundant=0	total_non_overlap_reads=5
JC	233	.	1	1767405	1	1	1767753	1	0	alignment_overlap=12	coverage_minus=2	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=8.469e-02	junction_possible_overlap_registers=215	key=1__1767405__1__1__1767741__1__12____251__251__0__0	max_left=167	max_left_minus=167	max_left_plus=106	max_min_left=106	max_min_left_minus=33	max_min_left_plus=106	max_min_right=71	max_min_right_minus=71	max_min_right_plus=0	max_pos_hash_score=430	max_right=214	max_right_minus=108	max_right_plus=214	neg_log10_pos_hash_p_value=5.3	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=8.469e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.71	side_1_overlap=12	side_1_possible_overlap_registers=227	side_1_read_count=48	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.64	side_2_overlap=0	side_2_possible_overlap_registers=215	side_2_read_count=41	side_2_redundant=0	total_non_overlap_reads=4
JC	234	.	1	1776022	1	1	1776264	1	0	alignment_overlap=9	coverage_minus=1	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=4.183e-02	junction_possible_overlap_registers=218	key=1__1776022__1__1__1776255__1__9____251__251__0__0	max_left=182	max_left_minus=182	max_left_plus=141	max_min_left=99	max_min_left_minus=0	max_min_left_plus=99	max_min_right=101	max_min_right_minus=60	max_min_right_plus=101	max_pos_hash_score=436	max_right=142	max_right_minus=60	max_right_plus=142	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=4.183e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.96	side_1_overlap=9	side_1_possible_overlap_registers=227	side_1_read_count=65	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.16	side_2_overlap=0	side_2_possible_overlap_registers=218	side_2_read_count=75	side_2_redundant=0	total_non_overlap_reads=3
JC	235	.	1	1806751	-1	1	1806987	-1	0	alignment_overlap=11	coverage_minus=0	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=6.072e-02	junction_possible_overlap_registers=216	key=1__1806751__-1__1__1806998__-1__11____251__251__0__0	max_left=86	max_left_minus=0	max_left_plus=86	max_min_left=86	max_min_left_minus=0	max_min_left_plus=86	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_pos_hash_score=432	max_right=176	max_right_minus=0	max_right_plus=176	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=6.072e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.67	side_1_overlap=11	side_1_possible_overlap_registers=227	side_1_read_count=45	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.78	side_2_overlap=0	side_2_possible_overlap_registers=216	side_2_read_count=50	side_2_redundant=0	total_non_overlap_reads=3
JC	236	.	1	1818536	-1	1	1818720	-1	0	alignment_overlap=6	coverage_minus=5	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=1.164e-01	junction_possible_overlap_registers=221	key=1__1818536__-1__1__1818726__-1__6____251__251__0__0	max_left=196	max_left_minus=196	max_left_plus=134	max_min_left=61	max_min_left_minus=61	max_min_left_plus=61	max_min_right=110	max_min_right_minus=110	max_min_right_plus=110	max_pos_hash_score=442	max_right=110	max_right_minus=110	max_right_plus=110	neg_log10_pos_hash_p_value=4.6	new_junction_coverage=0.12	new_junction_read_count=8	polymorphism_frequency=1.164e-01	pos_hash_score=6	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.84	side_1_overlap=6	side_1_possible_overlap_registers=227	side_1_read_count=57	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.00	side_2_overlap=0	side_2_possible_overlap_registers=221	side_2_read_count=66	side_2_redundant=0	total_non_overlap_reads=8
JC	237	.	1	1826963	-1	1	1827068	-1	0	alignment_overlap=10	coverage_minus=1	coverage_plus=4	flanking_left=251	flanking_right=251	frequency=8.287e-02	junction_possible_overlap_registers=217	key=1__1826963__-1__1__1827078__-1__10____251__251__0__0	max_left=163	max_left_minus=97	max_left_plus=163	max_min_left=97	max_min_left_minus=97	max_min_left_plus=97	max_min_right=78	max_min_right_minus=0	max_min_right_plus=78	max_pos_hash_score=434	max_right=107	max_right_minus=107	max_right_plus=107	neg_log10_pos_hash_p_value=5.3	new_junction_coverage=0.08	new_junction_read_count=5	polymorphism_frequency=8.287e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.79	side_1_overlap=10	side_1_possible_overlap_registers=227	side_1_read_count=53	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.93	side_2_overlap=0	side_2_possible_overlap_registers=217	side_2_read_count=60	side_2_redundant=0	total_non_overlap_reads=5
JC	238	.	1	1831505	1	1	1832633	1	0	alignment_overlap=10	coverage_minus=3	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=1.465e-01	junction_possible_overlap_registers=217	key=1__1831505__1__1__1832623__1__10____251__251__0__0	max_left=168	max_left_minus=168	max_left_plus=168	max_min_left=70	max_min_left_minus=70	max_min_left_plus=70	max_min_right=72	max_min_right_minus=72	max_min_right_plus=46	max_pos_hash_score=434	max_right=164	max_right_minus=164	max_right_plus=164	neg_log10_pos_hash_p_value=5.3	new_junction_coverage=0.08	new_junction_read_count=5	polymorphism_frequency=1.465e-01	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.58	side_1_overlap=10	side_1_possible_overlap_registers=227	side_1_read_count=39	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.33	side_2_overlap=0	side_2_possible_overlap_registers=217	side_2_read_count=21	side_2_redundant=0	total_non_overlap_reads=5
JC	239	.	1	1832942	-1	1	1833072	-1	0	alignment_overlap=7	coverage_minus=0	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=8.962e-02	junction_possible_overlap_registers=220	key=1__1832942__-1__1__1833079__-1__7____251__251__0__0	max_left=118	max_left_minus=0	max_left_plus=118	max_min_left=112	max_min_left_minus=0	max_min_left_plus=112	max_min_right=117	max_min_right_minus=0	max_min_right_plus=117	max_pos_hash_score=440	max_right=132	max_right_minus=0	max_right_plus=132	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=8.962e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.50	side_1_overlap=7	side_1_possible_overlap_registers=227	side_1_read_count=34	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.43	side_2_overlap=0	side_2_possible_overlap_registers=220	side_2_read_count=28	side_2_redundant=0	total_non_overlap_reads=3
JC	240	.	1	1857906	-1	1	1858023	-1	0	alignment_overlap=16	coverage_minus=1	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=8.612e-02	junction_possible_overlap_registers=211	key=1__1857906__-1__1__1858039__-1__16____251__251__0__0	max_left=177	max_left_minus=112	max_left_plus=177	max_min_left=116	max_min_left_minus=0	max_min_left_plus=116	max_min_right=93	max_min_right_minus=57	max_min_right_plus=93	max_pos_hash_score=422	max_right=119	max_right_minus=57	max_right_plus=119	neg_log10_pos_hash_p_value=5.2	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=8.612e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.65	side_1_overlap=16	side_1_possible_overlap_registers=227	side_1_read_count=44	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.70	side_2_overlap=0	side_2_possible_overlap_registers=211	side_2_read_count=44	side_2_redundant=0	total_non_overlap_reads=4
JC	241	.	1	1858536	-1	1	1859023	-1	0	alignment_overlap=10	coverage_minus=2	coverage_plus=1	flanking_left=251	flanking_right=251	frequency=4.614e-02	junction_possible_overlap_registers=217	key=1__1858536__-1__1__1859033__-1__10____251__251__0__0	max_left=116	max_left_minus=116	max_left_plus=93	max_min_left=116	max_min_left_minus=116	max_min_left_plus=93	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_pos_hash_score=434	max_right=148	max_right_minus=148	max_right_plus=148	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=4.614e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.99	side_1_overlap=10	side_1_possible_overlap_registers=227	side_1_read_count=67	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.93	side_2_overlap=0	side_2_possible_overlap_registers=217	side_2_read_count=60	side_2_redundant=0	total_non_overlap_reads=3
JC	242	.	1	1916367	-1	1	1916557	-1	0	alignment_overlap=3	coverage_minus=1	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=4.952e-02	junction_possible_overlap_registers=224	key=1__1916367__-1__1__1916560__-1__3____251__251__0__0	max_left=154	max_left_minus=60	max_left_plus=154	max_min_left=60	max_min_left_minus=60	max_min_left_plus=60	max_min_right=93	max_min_right_minus=0	max_min_right_plus=93	max_pos_hash_score=448	max_right=143	max_right_minus=143	max_right_plus=143	neg_log10_pos_hash_p_value=5.9	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=4.952e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.93	side_1_overlap=3	side_1_possible_overlap_registers=227	side_1_read_count=63	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.80	side_2_overlap=0	side_2_possible_overlap_registers=224	side_2_read_count=53	side_2_redundant=0	total_non_overlap_reads=3
JC	243	.	1	1921144	-1	1	1921445	-1	0	alignment_overlap=8	coverage_minus=3	coverage_plus=1	flanking_left=251	flanking_right=251	frequency=6.301e-02	junction_possible_overlap_registers=219	key=1__1921144__-1__1__1921453__-1__8____251__251__0__0	max_left=165	max_left_minus=125	max_left_plus=165	max_min_left=70	max_min_left_minus=70	max_min_left_plus=0	max_min_right=117	max_min_right_minus=117	max_min_right_plus=77	max_pos_hash_score=438	max_right=117	max_right_minus=117	max_right_plus=77	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=6.301e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.86	side_1_overlap=8	side_1_possible_overlap_registers=227	side_1_read_count=58	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.97	side_2_overlap=0	side_2_possible_overlap_registers=219	side_2_read_count=63	side_2_redundant=0	total_non_overlap_reads=4
JC	244	.	1	1923481	-1	1	1923609	-1	0	alignment_overlap=13	coverage_minus=2	coverage_plus=4	flanking_left=251	flanking_right=251	frequency=9.060e-02	junction_possible_overlap_registers=214	key=1__1923481__-1__1__1923622__-1__13____251__251__0__0	max_left=210	max_left_minus=210	max_left_plus=110	max_min_left=110	max_min_left_minus=49	max_min_left_plus=110	max_min_right=28	max_min_right_minus=28	max_min_right_plus=0	max_pos_hash_score=428	max_right=130	max_right_minus=128	max_right_plus=130	neg_log10_pos_hash_p_value=5.3	new_junction_coverage=0.09	new_junction_read_count=6	polymorphism_frequency=9.060e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.92	side_1_overlap=13	side_1_possible_overlap_registers=227	side_1_read_count=62	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.97	side_2_overlap=0	side_2_possible_overlap_registers=214	side_2_read_count=62	side_2_redundant=0	total_non_overlap_reads=6
JC	245	.	1	1940802	1	1	1940975	1	0	alignment_overlap=11	coverage_minus=3	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=1.259e-01	junction_possible_overlap_registers=216	key=1__1940802__1__1__1940964__1__11____251__251__0__0	max_left=147	max_left_minus=147	max_left_plus=110	max_min_left=110	max_min_left_minus=80	max_min_left_plus=110	max_min_right=93	max_min_right_minus=93	max_min_right_plus=0	max_pos_hash_score=432	max_right=171	max_right_minus=160	max_right_plus=171	neg_log10_pos_hash_p_value=5.3	new_junction_coverage=0.09	new_junction_read_count=6	polymorphism_frequency=1.259e-01	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.52	side_1_overlap=11	side_1_possible_overlap_registers=227	side_1_read_count=35	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.78	side_2_overlap=0	side_2_possible_overlap_registers=216	side_2_read_count=50	side_2_redundant=0	total_non_overlap_reads=6
JC	246	.	1	1960475	1	1	1960639	1	0	alignment_overlap=11	coverage_minus=6	coverage_plus=1	flanking_left=251	flanking_right=251	frequency=9.272e-02	junction_possible_overlap_registers=216	key=1__1960475__1__1__1960628__1__11____251__251__0__0	max_left=143	max_left_minus=143	max_left_plus=20	max_min_left=20	max_min_left_minus=0	max_min_left_plus=20	max_min_right=116	max_min_right_minus=116	max_min_right_plus=0	max_pos_hash_score=432	max_right=220	max_right_minus=116	max_right_plus=220	neg_log10_pos_hash_p_value=5.3	new_junction_coverage=0.11	new_junction_read_count=7	polymorphism_frequency=9.272e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.92	side_1_overlap=11	side_1_possible_overlap_registers=227	side_1_read_count=62	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.21	side_2_overlap=0	side_2_possible_overlap_registers=216	side_2_read_count=78	side_2_redundant=0	total_non_overlap_reads=7
JC	247	.	1	1964354	-1	1	1964956	-1	0	alignment_overlap=8	coverage_minus=2	coverage_plus=1	flanking_left=251	flanking_right=251	frequency=4.589e-02	junction_possible_overlap_registers=219	key=1__1964354__-1__1__1964964__-1__8____251__251__0__0	max_left=134	max_left_minus=134	max_left_plus=50	max_min_left=50	max_min_left_minus=0	max_min_left_plus=50	max_min_right=110	max_min_right_minus=110	max_min_right_plus=0	max_pos_hash_score=438	max_right=191	max_right_minus=110	max_right_plus=191	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=4.589e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.95	side_1_overlap=8	side_1_possible_overlap_registers=227	side_1_read_count=64	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.97	side_2_overlap=0	side_2_possible_overlap_registers=219	side_2_read_count=63	side_2_redundant=0	total_non_overlap_reads=3
JC	248	.	1	1974331	-1	1	1974759	-1	0	alignment_overlap=12	coverage_minus=2	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=8.342e-02	junction_possible_overlap_registers=215	key=1__1974331__-1__1__1974771__-1__12____251__251__0__0	max_left=124	max_left_minus=98	max_left_plus=124	max_min_left=98	max_min_left_minus=98	max_min_left_plus=98	max_min_right=117	max_min_right_minus=0	max_min_right_plus=117	max_pos_hash_score=430	max_right=178	max_right_minus=178	max_right_plus=117	neg_log10_pos_hash_p_value=5.3	new_junction_coverage=0.08	new_junction_read_count=5	polymorphism_frequency=8.342e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.87	side_1_overlap=12	side_1_possible_overlap_registers=227	side_1_read_count=59	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.84	side_2_overlap=0	side_2_possible_overlap_registers=215	side_2_read_count=54	side_2_redundant=0	total_non_overlap_reads=5
JC	249	.	1	1980035	-1	1	1981817	-1	0	alignment_overlap=3	coverage_minus=3	coverage_plus=0	flanking_left=251	flanking_right=251	frequency=5.915e-02	junction_possible_overlap_registers=224	key=1__1980035__-1__1__1981820__-1__3____251__251__0__0	max_left=156	max_left_minus=156	max_left_plus=0	max_min_left=100	max_min_left_minus=100	max_min_left_plus=0	max_min_right=92	max_min_right_minus=92	max_min_right_plus=0	max_pos_hash_score=448	max_right=174	max_right_minus=174	max_right_plus=0	neg_log10_pos_hash_p_value=5.9	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=5.915e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.64	side_1_overlap=3	side_1_possible_overlap_registers=227	side_1_read_count=43	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.80	side_2_overlap=0	side_2_possible_overlap_registers=224	side_2_read_count=53	side_2_redundant=0	total_non_overlap_reads=3
JC	250	.	1	1992248	-1	1	1992825	-1	0	alignment_overlap=13	coverage_minus=1	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=7.041e-02	junction_possible_overlap_registers=214	key=1__1992248__-1__1__1992838__-1__13____251__251__0__0	max_left=108	max_left_minus=108	max_left_plus=102	max_min_left=108	max_min_left_minus=108	max_min_left_plus=102	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_pos_hash_score=428	max_right=230	max_right_minus=129	max_right_plus=230	neg_log10_pos_hash_p_value=5.3	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=7.041e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.87	side_1_overlap=13	side_1_possible_overlap_registers=227	side_1_read_count=59	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.79	side_2_overlap=0	side_2_possible_overlap_registers=214	side_2_read_count=50	side_2_redundant=0	total_non_overlap_reads=4
JC	251	.	1	1993995	-1	1	1995687	-1	0	alignment_overlap=9	coverage_minus=1	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=7.034e-02	junction_possible_overlap_registers=218	key=1__1993995__-1__1__1995696__-1__9____251__251__0__0	max_left=131	max_left_minus=98	max_left_plus=131	max_min_left=98	max_min_left_minus=98	max_min_left_plus=97	max_min_right=111	max_min_right_minus=0	max_min_right_plus=111	max_pos_hash_score=436	max_right=145	max_right_minus=144	max_right_plus=145	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=7.034e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.84	side_1_overlap=9	side_1_possible_overlap_registers=227	side_1_read_count=57	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.79	side_2_overlap=0	side_2_possible_overlap_registers=218	side_2_read_count=51	side_2_redundant=0	total_non_overlap_reads=4
JC	252	.	1	2001544	-1	1	2001664	-1	0	alignment_overlap=8	coverage_minus=2	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=6.259e-02	junction_possible_overlap_registers=219	key=1__2001544__-1__1__2001672__-1__8____251__251__0__0	max_left=201	max_left_minus=201	max_left_plus=184	max_min_left=96	max_min_left_minus=96	max_min_left_plus=0	max_min_right=57	max_min_right_minus=42	max_min_right_plus=57	max_pos_hash_score=438	max_right=113	max_right_minus=113	max_right_plus=57	neg_log10_pos_hash_p_value=5.4	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=6.259e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.92	side_1_overlap=8	side_1_possible_overlap_registers=227	side_1_read_count=62	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.92	side_2_overlap=0	side_2_possible_overlap_registers=219	side_2_read_count=60	side_2_redundant=0	total_non_overlap_reads=4
JC	253	.	1	2010383	1	1	2010536	1	0	alignment_overlap=4	coverage_minus=2	coverage_plus=5	flanking_left=251	flanking_right=251	frequency=1.386e-01	junction_possible_overlap_registers=223	key=1__2010383__1__1__2010532__1__4____251__251__0__0	max_left=146	max_left_minus=146	max_left_plus=107	max_min_left=107	max_min_left_minus=0	max_min_left_plus=107	max_min_right=101	max_min_right_minus=101	max_min_right_plus=0	max_pos_hash_score=446	max_right=207	max_right_minus=101	max_right_plus=207	neg_log10_pos_hash_p_value=5.4	new_junction_coverage=0.11	new_junction_read_count=7	polymorphism_frequency=1.386e-01	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.83	side_1_overlap=4	side_1_possible_overlap_registers=227	side_1_read_count=56	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.48	side_2_overlap=0	side_2_possible_overlap_registers=223	side_2_read_count=32	side_2_redundant=0	total_non_overlap_reads=7
JC	254	.	1	2034490	-1	1	2034636	-1	0	alignment_overlap=4	coverage_minus=0	coverage_plus=4	flanking_left=251	flanking_right=251	frequency=5.803e-02	junction_possible_overlap_registers=223	key=1__2034490__-1__1__2034640__-1__4____251__251__0__0	max_left=158	max_left_minus=0	max_left_plus=158	max_min_left=105	max_min_left_minus=0	max_min_left_plus=105	max_min_right=70	max_min_right_minus=0	max_min_right_plus=70	max_pos_hash_score=446	max_right=147	max_right_minus=0	max_right_plus=147	neg_log10_pos_hash_p_value=5.9	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=5.803e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.96	side_1_overlap=4	side_1_possible_overlap_registers=227	side_1_read_count=65	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.00	side_2_overlap=0	side_2_possible_overlap_registers=223	side_2_read_count=66	side_2_redundant=0	total_non_overlap_reads=4
JC	255	.	1	2040019	-1	1	2040485	-1	0	alignment_overlap=12	coverage_minus=2	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=7.021e-02	junction_possible_overlap_registers=215	key=1__2040019__-1__1__2040497__-1__12____251__251__0__0	max_left=177	max_left_minus=177	max_left_plus=173	max_min_left=86	max_min_left_minus=0	max_min_left_plus=86	max_min_right=103	max_min_right_minus=103	max_min_right_plus=65	max_pos_hash_score=430	max_right=153	max_right_minus=103	max_right_plus=153	neg_log10_pos_hash_p_value=5.3	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=7.021e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.58	side_1_overlap=12	side_1_possible_overlap_registers=227	side_1_read_count=39	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.08	side_2_overlap=0	side_2_possible_overlap_registers=215	side_2_read_count=69	side_2_redundant=0	total_non_overlap_reads=4
JC	256	.	1	2043004	-1	1	2043123	-1	0	alignment_overlap=5	coverage_minus=4	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=9.547e-02	junction_possible_overlap_registers=222	key=1__2043004__-1__1__2043128__-1__5____251__251__0__0	max_left=181	max_left_minus=181	max_left_plus=137	max_min_left=64	max_min_left_minus=64	max_min_left_plus=0	max_min_right=102	max_min_right_minus=102	max_min_right_plus=102	max_pos_hash_score=444	max_right=102	max_right_minus=102	max_right_plus=102	neg_log10_pos_hash_p_value=5.0	new_junction_coverage=0.09	new_junction_read_count=6	polymorphism_frequency=9.547e-02	pos_hash_score=5	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.87	side_1_overlap=5	side_1_possible_overlap_registers=227	side_1_read_count=59	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.85	side_2_overlap=0	side_2_possible_overlap_registers=222	side_2_read_count=56	side_2_redundant=0	total_non_overlap_reads=6
JC	257	.	1	2063531	-1	1	2063771	-1	0	alignment_overlap=9	coverage_minus=4	coverage_plus=0	flanking_left=251	flanking_right=251	frequency=6.036e-02	junction_possible_overlap_registers=218	key=1__2063531__-1__1__2063780__-1__9____251__251__0__0	max_left=138	max_left_minus=138	max_left_plus=0	max_min_left=105	max_min_left_minus=105	max_min_left_plus=0	max_min_right=115	max_min_right_minus=115	max_min_right_plus=0	max_pos_hash_score=436	max_right=136	max_right_minus=136	max_right_plus=0	neg_log10_pos_hash_p_value=5.4	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=6.036e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.92	side_1_overlap=9	side_1_possible_overlap_registers=227	side_1_read_count=62	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.00	side_2_overlap=0	side_2_possible_overlap_registers=218	side_2_read_count=65	side_2_redundant=0	total_non_overlap_reads=4
JC	258	.	1	2071576	-1	1	2072039	-1	0	alignment_overlap=7	coverage_minus=2	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=5.453e-02	junction_possible_overlap_registers=220	key=1__2071576__-1__1__2072046__-1__7____251__251__0__0	max_left=176	max_left_minus=176	max_left_plus=168	max_min_left=47	max_min_left_minus=0	max_min_left_plus=47	max_min_right=118	max_min_right_minus=118	max_min_right_plus=76	max_pos_hash_score=440	max_right=203	max_right_minus=118	max_right_plus=203	neg_log10_pos_hash_p_value=5.4	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=5.453e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.10	side_1_overlap=7	side_1_possible_overlap_registers=227	side_1_read_count=74	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.02	side_2_overlap=0	side_2_possible_overlap_registers=220	side_2_read_count=67	side_2_redundant=0	total_non_overlap_reads=4
JC	259	.	1	2097726	1	1	2098108	1	0	alignment_overlap=10	coverage_minus=2	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=6.713e-02	junction_possible_overlap_registers=217	key=1__2097726__1__1__2098098__1__10____251__251__0__0	max_left=181	max_left_minus=148	max_left_plus=181	max_min_left=62	max_min_left_minus=0	max_min_left_plus=62	max_min_right=111	max_min_right_minus=111	max_min_right_plus=74	max_pos_hash_score=434	max_right=176	max_right_minus=111	max_right_plus=176	neg_log10_pos_hash_p_value=4.9	new_junction_coverage=0.08	new_junction_read_count=5	polymorphism_frequency=6.713e-02	pos_hash_score=5	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.02	side_1_overlap=10	side_1_possible_overlap_registers=227	side_1_read_count=69	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.13	side_2_overlap=0	side_2_possible_overlap_registers=217	side_2_read_count=73	side_2_redundant=0	total_non_overlap_reads=5
UN	260	.	1	5525	6187
UN	261	.	1	230005	230005
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UN	263	.	1	230300	230304
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